@jbrowse/plugin-data-management 2.18.0 → 3.0.1
This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
- package/dist/AddConnectionWidget/components/AddConnectionWidget.d.ts +1 -2
- package/dist/AddConnectionWidget/components/AddConnectionWidget.js +28 -57
- package/dist/AddConnectionWidget/components/ConfigureConnection.d.ts +1 -2
- package/dist/AddConnectionWidget/components/ConfigureConnection.js +3 -26
- package/dist/AddConnectionWidget/components/ConnectionTypeSelect.d.ts +1 -2
- package/dist/AddConnectionWidget/components/ConnectionTypeSelect.js +5 -30
- package/dist/AddConnectionWidget/index.js +17 -7
- package/dist/AddTrackWidget/components/AddTrackStatusMessage.d.ts +9 -0
- package/dist/AddTrackWidget/components/AddTrackStatusMessage.js +16 -0
- package/dist/AddTrackWidget/components/AddTrackUnknownAdapterPrompt.d.ts +4 -0
- package/dist/AddTrackWidget/components/AddTrackUnknownAdapterPrompt.js +19 -0
- package/dist/AddTrackWidget/components/AddTrackWidget.d.ts +1 -2
- package/dist/AddTrackWidget/components/AddTrackWidget.js +5 -32
- package/dist/AddTrackWidget/components/ConfirmTrack.d.ts +1 -2
- package/dist/AddTrackWidget/components/ConfirmTrack.js +33 -91
- package/dist/AddTrackWidget/components/DefaultAddTrackWorkflow.d.ts +1 -2
- package/dist/AddTrackWidget/components/DefaultAddTrackWorkflow.js +22 -104
- package/dist/AddTrackWidget/components/PasteConfigWorkflow.d.ts +1 -2
- package/dist/AddTrackWidget/components/PasteConfigWorkflow.js +29 -49
- package/dist/AddTrackWidget/components/TextIndexingConfig.d.ts +1 -2
- package/dist/AddTrackWidget/components/TextIndexingConfig.js +35 -70
- package/dist/AddTrackWidget/components/TrackAdapterSelector.d.ts +1 -2
- package/dist/AddTrackWidget/components/TrackAdapterSelector.js +12 -33
- package/dist/AddTrackWidget/components/TrackSourceSelect.d.ts +1 -2
- package/dist/AddTrackWidget/components/TrackSourceSelect.js +2 -8
- package/dist/AddTrackWidget/components/TrackTypeSelector.d.ts +2 -3
- package/dist/AddTrackWidget/components/TrackTypeSelector.js +7 -15
- package/dist/AddTrackWidget/components/Unsupported.d.ts +1 -0
- package/dist/AddTrackWidget/components/Unsupported.js +15 -0
- package/dist/AddTrackWidget/components/doSubmit.d.ts +4 -0
- package/dist/AddTrackWidget/components/doSubmit.js +50 -0
- package/dist/AddTrackWidget/components/util.d.ts +2 -0
- package/dist/AddTrackWidget/components/util.js +15 -0
- package/dist/AddTrackWidget/index.js +17 -7
- package/dist/AddTrackWidget/model.d.ts +13 -0
- package/dist/AddTrackWidget/model.js +43 -3
- package/dist/AssemblyManager/AssemblyAddForm.d.ts +1 -2
- package/dist/AssemblyManager/AssemblyAddForm.js +73 -120
- package/dist/AssemblyManager/AssemblyEditor.d.ts +1 -2
- package/dist/AssemblyManager/AssemblyEditor.js +4 -11
- package/dist/AssemblyManager/AssemblyManager.d.ts +1 -2
- package/dist/AssemblyManager/AssemblyManager.js +14 -36
- package/dist/AssemblyManager/AssemblyTable.d.ts +1 -2
- package/dist/AssemblyManager/AssemblyTable.js +31 -43
- package/dist/HierarchicalTrackSelectorWidget/components/HierarchicalFab.d.ts +1 -2
- package/dist/HierarchicalTrackSelectorWidget/components/HierarchicalFab.js +19 -46
- package/dist/HierarchicalTrackSelectorWidget/components/HierarchicalTrackSelector.d.ts +1 -2
- package/dist/HierarchicalTrackSelectorWidget/components/HierarchicalTrackSelector.js +6 -32
- package/dist/HierarchicalTrackSelectorWidget/components/ShoppingCart.d.ts +1 -2
- package/dist/HierarchicalTrackSelectorWidget/components/ShoppingCart.js +18 -7
- package/dist/HierarchicalTrackSelectorWidget/components/dialogs/CloseConnectionDialog.d.ts +1 -2
- package/dist/HierarchicalTrackSelectorWidget/components/dialogs/CloseConnectionDialog.js +7 -18
- package/dist/HierarchicalTrackSelectorWidget/components/dialogs/DeleteConnectionDialog.d.ts +1 -2
- package/dist/HierarchicalTrackSelectorWidget/components/dialogs/DeleteConnectionDialog.js +8 -16
- package/dist/HierarchicalTrackSelectorWidget/components/dialogs/ManageConnectionsDialog.d.ts +1 -2
- package/dist/HierarchicalTrackSelectorWidget/components/dialogs/ManageConnectionsDialog.js +10 -22
- package/dist/HierarchicalTrackSelectorWidget/components/dialogs/ToggleConnectionsDialog.d.ts +1 -2
- package/dist/HierarchicalTrackSelectorWidget/components/dialogs/ToggleConnectionsDialog.js +7 -16
- package/dist/HierarchicalTrackSelectorWidget/components/faceted/FacetFilter.d.ts +1 -2
- package/dist/HierarchicalTrackSelectorWidget/components/faceted/FacetFilter.js +17 -51
- package/dist/HierarchicalTrackSelectorWidget/components/faceted/FacetFilters.d.ts +1 -2
- package/dist/HierarchicalTrackSelectorWidget/components/faceted/FacetFilters.js +22 -20
- package/dist/HierarchicalTrackSelectorWidget/components/faceted/FacetedDataGrid.d.ts +9 -0
- package/dist/HierarchicalTrackSelectorWidget/components/faceted/FacetedDataGrid.js +71 -0
- package/dist/HierarchicalTrackSelectorWidget/components/faceted/FacetedDialog.d.ts +1 -2
- package/dist/HierarchicalTrackSelectorWidget/components/faceted/FacetedDialog.js +2 -4
- package/dist/HierarchicalTrackSelectorWidget/components/faceted/FacetedHeader.d.ts +1 -2
- package/dist/HierarchicalTrackSelectorWidget/components/faceted/FacetedHeader.js +46 -79
- package/dist/HierarchicalTrackSelectorWidget/components/faceted/FacetedSelector.d.ts +1 -2
- package/dist/HierarchicalTrackSelectorWidget/components/faceted/FacetedSelector.js +15 -107
- package/dist/HierarchicalTrackSelectorWidget/components/tree/DropdownTrackSelector.d.ts +1 -2
- package/dist/HierarchicalTrackSelectorWidget/components/tree/DropdownTrackSelector.js +5 -30
- package/dist/HierarchicalTrackSelectorWidget/components/tree/FavoriteTracks.d.ts +1 -2
- package/dist/HierarchicalTrackSelectorWidget/components/tree/FavoriteTracks.js +4 -7
- package/dist/HierarchicalTrackSelectorWidget/components/tree/HamburgerMenu.d.ts +1 -2
- package/dist/HierarchicalTrackSelectorWidget/components/tree/HamburgerMenu.js +122 -119
- package/dist/HierarchicalTrackSelectorWidget/components/tree/HierarchicalHeader.d.ts +1 -2
- package/dist/HierarchicalTrackSelectorWidget/components/tree/HierarchicalHeader.js +6 -14
- package/dist/HierarchicalTrackSelectorWidget/components/tree/HierarchicalTree.d.ts +1 -2
- package/dist/HierarchicalTrackSelectorWidget/components/tree/HierarchicalTree.js +3 -26
- package/dist/HierarchicalTrackSelectorWidget/components/tree/RecentlyUsedTracks.d.ts +1 -2
- package/dist/HierarchicalTrackSelectorWidget/components/tree/RecentlyUsedTracks.js +4 -7
- package/dist/HierarchicalTrackSelectorWidget/components/tree/TrackCategory.d.ts +1 -2
- package/dist/HierarchicalTrackSelectorWidget/components/tree/TrackCategory.js +44 -72
- package/dist/HierarchicalTrackSelectorWidget/components/tree/TrackLabel.d.ts +1 -2
- package/dist/HierarchicalTrackSelectorWidget/components/tree/TrackLabel.js +17 -11
- package/dist/HierarchicalTrackSelectorWidget/components/tree/TrackLabelMenu.d.ts +1 -2
- package/dist/HierarchicalTrackSelectorWidget/components/tree/TrackLabelMenu.js +3 -4
- package/dist/HierarchicalTrackSelectorWidget/components/tree/TrackListNode.d.ts +1 -2
- package/dist/HierarchicalTrackSelectorWidget/components/tree/TrackListNode.js +6 -9
- package/dist/HierarchicalTrackSelectorWidget/components/util.js +1 -3
- package/dist/HierarchicalTrackSelectorWidget/facetedModel.d.ts +1 -0
- package/dist/HierarchicalTrackSelectorWidget/facetedModel.js +6 -6
- package/dist/HierarchicalTrackSelectorWidget/index.js +17 -7
- package/dist/PluginStoreWidget/components/AddCustomPluginDialog.d.ts +1 -2
- package/dist/PluginStoreWidget/components/AddCustomPluginDialog.js +15 -54
- package/dist/PluginStoreWidget/components/DeletePluginDialog.d.ts +1 -2
- package/dist/PluginStoreWidget/components/DeletePluginDialog.js +9 -21
- package/dist/PluginStoreWidget/components/InstalledPlugin.d.ts +1 -2
- package/dist/PluginStoreWidget/components/InstalledPlugin.js +38 -31
- package/dist/PluginStoreWidget/components/InstalledPluginsList.d.ts +1 -2
- package/dist/PluginStoreWidget/components/InstalledPluginsList.js +4 -4
- package/dist/PluginStoreWidget/components/PluginCard.d.ts +1 -2
- package/dist/PluginStoreWidget/components/PluginCard.js +14 -46
- package/dist/PluginStoreWidget/components/PluginStoreWidget.d.ts +1 -2
- package/dist/PluginStoreWidget/components/PluginStoreWidget.js +40 -52
- package/dist/PluginStoreWidget/index.js +17 -7
- package/dist/UCSCTrackHub/doConnect.js +18 -10
- package/dist/UCSCTrackHub/model.js +17 -7
- package/dist/UCSCTrackHub/ucscTrackHub.d.ts +53 -36
- package/dist/UCSCTrackHub/ucscTrackHub.js +141 -165
- package/dist/UCSCTrackHub/util.d.ts +22 -0
- package/dist/UCSCTrackHub/util.js +41 -0
- package/dist/index.d.ts +2 -2
- package/dist/index.js +17 -7
- package/esm/AddConnectionWidget/components/AddConnectionWidget.d.ts +1 -2
- package/esm/AddConnectionWidget/components/AddConnectionWidget.js +28 -34
- package/esm/AddConnectionWidget/components/ConfigureConnection.d.ts +1 -2
- package/esm/AddConnectionWidget/components/ConfigureConnection.js +3 -3
- package/esm/AddConnectionWidget/components/ConnectionTypeSelect.d.ts +1 -2
- package/esm/AddConnectionWidget/components/ConnectionTypeSelect.js +5 -7
- package/esm/AddTrackWidget/components/AddTrackStatusMessage.d.ts +9 -0
- package/esm/AddTrackWidget/components/AddTrackStatusMessage.js +13 -0
- package/esm/AddTrackWidget/components/AddTrackUnknownAdapterPrompt.d.ts +4 -0
- package/esm/AddTrackWidget/components/AddTrackUnknownAdapterPrompt.js +13 -0
- package/esm/AddTrackWidget/components/AddTrackWidget.d.ts +1 -2
- package/esm/AddTrackWidget/components/AddTrackWidget.js +5 -9
- package/esm/AddTrackWidget/components/ConfirmTrack.d.ts +1 -2
- package/esm/AddTrackWidget/components/ConfirmTrack.js +35 -70
- package/esm/AddTrackWidget/components/DefaultAddTrackWorkflow.d.ts +1 -2
- package/esm/AddTrackWidget/components/DefaultAddTrackWorkflow.js +24 -83
- package/esm/AddTrackWidget/components/PasteConfigWorkflow.d.ts +1 -2
- package/esm/AddTrackWidget/components/PasteConfigWorkflow.js +29 -26
- package/esm/AddTrackWidget/components/TextIndexingConfig.d.ts +1 -2
- package/esm/AddTrackWidget/components/TextIndexingConfig.js +35 -47
- package/esm/AddTrackWidget/components/TrackAdapterSelector.d.ts +1 -2
- package/esm/AddTrackWidget/components/TrackAdapterSelector.js +12 -30
- package/esm/AddTrackWidget/components/TrackSourceSelect.d.ts +1 -2
- package/esm/AddTrackWidget/components/TrackSourceSelect.js +2 -5
- package/esm/AddTrackWidget/components/TrackTypeSelector.d.ts +2 -3
- package/esm/AddTrackWidget/components/TrackTypeSelector.js +7 -12
- package/esm/AddTrackWidget/components/Unsupported.d.ts +1 -0
- package/esm/AddTrackWidget/components/Unsupported.js +12 -0
- package/esm/AddTrackWidget/components/doSubmit.d.ts +4 -0
- package/esm/AddTrackWidget/components/doSubmit.js +47 -0
- package/esm/AddTrackWidget/components/util.d.ts +2 -0
- package/esm/AddTrackWidget/components/util.js +12 -0
- package/esm/AddTrackWidget/model.d.ts +13 -0
- package/esm/AddTrackWidget/model.js +40 -3
- package/esm/AssemblyManager/AssemblyAddForm.d.ts +1 -2
- package/esm/AssemblyManager/AssemblyAddForm.js +73 -97
- package/esm/AssemblyManager/AssemblyEditor.d.ts +1 -2
- package/esm/AssemblyManager/AssemblyEditor.js +4 -8
- package/esm/AssemblyManager/AssemblyManager.d.ts +1 -2
- package/esm/AssemblyManager/AssemblyManager.js +14 -13
- package/esm/AssemblyManager/AssemblyTable.d.ts +1 -2
- package/esm/AssemblyManager/AssemblyTable.js +31 -43
- package/esm/HierarchicalTrackSelectorWidget/components/HierarchicalFab.d.ts +1 -2
- package/esm/HierarchicalTrackSelectorWidget/components/HierarchicalFab.js +19 -23
- package/esm/HierarchicalTrackSelectorWidget/components/HierarchicalTrackSelector.d.ts +1 -2
- package/esm/HierarchicalTrackSelectorWidget/components/HierarchicalTrackSelector.js +6 -9
- package/esm/HierarchicalTrackSelectorWidget/components/ShoppingCart.d.ts +1 -2
- package/esm/HierarchicalTrackSelectorWidget/components/ShoppingCart.js +18 -7
- package/esm/HierarchicalTrackSelectorWidget/components/dialogs/CloseConnectionDialog.d.ts +1 -2
- package/esm/HierarchicalTrackSelectorWidget/components/dialogs/CloseConnectionDialog.js +7 -15
- package/esm/HierarchicalTrackSelectorWidget/components/dialogs/DeleteConnectionDialog.d.ts +1 -2
- package/esm/HierarchicalTrackSelectorWidget/components/dialogs/DeleteConnectionDialog.js +8 -13
- package/esm/HierarchicalTrackSelectorWidget/components/dialogs/ManageConnectionsDialog.d.ts +1 -2
- package/esm/HierarchicalTrackSelectorWidget/components/dialogs/ManageConnectionsDialog.js +10 -22
- package/esm/HierarchicalTrackSelectorWidget/components/dialogs/ToggleConnectionsDialog.d.ts +1 -2
- package/esm/HierarchicalTrackSelectorWidget/components/dialogs/ToggleConnectionsDialog.js +7 -13
- package/esm/HierarchicalTrackSelectorWidget/components/faceted/FacetFilter.d.ts +1 -2
- package/esm/HierarchicalTrackSelectorWidget/components/faceted/FacetFilter.js +17 -28
- package/esm/HierarchicalTrackSelectorWidget/components/faceted/FacetFilters.d.ts +1 -2
- package/esm/HierarchicalTrackSelectorWidget/components/faceted/FacetFilters.js +22 -20
- package/esm/HierarchicalTrackSelectorWidget/components/faceted/FacetedDataGrid.d.ts +9 -0
- package/esm/HierarchicalTrackSelectorWidget/components/faceted/FacetedDataGrid.js +69 -0
- package/esm/HierarchicalTrackSelectorWidget/components/faceted/FacetedDialog.d.ts +1 -2
- package/esm/HierarchicalTrackSelectorWidget/components/faceted/FacetedDialog.js +2 -4
- package/esm/HierarchicalTrackSelectorWidget/components/faceted/FacetedHeader.d.ts +1 -2
- package/esm/HierarchicalTrackSelectorWidget/components/faceted/FacetedHeader.js +46 -56
- package/esm/HierarchicalTrackSelectorWidget/components/faceted/FacetedSelector.d.ts +1 -2
- package/esm/HierarchicalTrackSelectorWidget/components/faceted/FacetedSelector.js +15 -84
- package/esm/HierarchicalTrackSelectorWidget/components/tree/DropdownTrackSelector.d.ts +1 -2
- package/esm/HierarchicalTrackSelectorWidget/components/tree/DropdownTrackSelector.js +5 -7
- package/esm/HierarchicalTrackSelectorWidget/components/tree/FavoriteTracks.d.ts +1 -2
- package/esm/HierarchicalTrackSelectorWidget/components/tree/FavoriteTracks.js +4 -7
- package/esm/HierarchicalTrackSelectorWidget/components/tree/HamburgerMenu.d.ts +1 -2
- package/esm/HierarchicalTrackSelectorWidget/components/tree/HamburgerMenu.js +105 -112
- package/esm/HierarchicalTrackSelectorWidget/components/tree/HierarchicalHeader.d.ts +1 -2
- package/esm/HierarchicalTrackSelectorWidget/components/tree/HierarchicalHeader.js +6 -14
- package/esm/HierarchicalTrackSelectorWidget/components/tree/HierarchicalTree.d.ts +1 -2
- package/esm/HierarchicalTrackSelectorWidget/components/tree/HierarchicalTree.js +3 -3
- package/esm/HierarchicalTrackSelectorWidget/components/tree/RecentlyUsedTracks.d.ts +1 -2
- package/esm/HierarchicalTrackSelectorWidget/components/tree/RecentlyUsedTracks.js +4 -7
- package/esm/HierarchicalTrackSelectorWidget/components/tree/TrackCategory.d.ts +1 -2
- package/esm/HierarchicalTrackSelectorWidget/components/tree/TrackCategory.js +44 -49
- package/esm/HierarchicalTrackSelectorWidget/components/tree/TrackLabel.d.ts +1 -2
- package/esm/HierarchicalTrackSelectorWidget/components/tree/TrackLabel.js +17 -11
- package/esm/HierarchicalTrackSelectorWidget/components/tree/TrackLabelMenu.d.ts +1 -2
- package/esm/HierarchicalTrackSelectorWidget/components/tree/TrackLabelMenu.js +3 -4
- package/esm/HierarchicalTrackSelectorWidget/components/tree/TrackListNode.d.ts +1 -2
- package/esm/HierarchicalTrackSelectorWidget/components/tree/TrackListNode.js +6 -9
- package/esm/HierarchicalTrackSelectorWidget/components/util.js +1 -3
- package/esm/HierarchicalTrackSelectorWidget/facetedModel.d.ts +1 -0
- package/esm/HierarchicalTrackSelectorWidget/facetedModel.js +7 -7
- package/esm/PluginStoreWidget/components/AddCustomPluginDialog.d.ts +1 -2
- package/esm/PluginStoreWidget/components/AddCustomPluginDialog.js +15 -31
- package/esm/PluginStoreWidget/components/DeletePluginDialog.d.ts +1 -2
- package/esm/PluginStoreWidget/components/DeletePluginDialog.js +9 -18
- package/esm/PluginStoreWidget/components/InstalledPlugin.d.ts +1 -2
- package/esm/PluginStoreWidget/components/InstalledPlugin.js +21 -24
- package/esm/PluginStoreWidget/components/InstalledPluginsList.d.ts +1 -2
- package/esm/PluginStoreWidget/components/InstalledPluginsList.js +4 -4
- package/esm/PluginStoreWidget/components/PluginCard.d.ts +1 -2
- package/esm/PluginStoreWidget/components/PluginCard.js +14 -23
- package/esm/PluginStoreWidget/components/PluginStoreWidget.d.ts +1 -2
- package/esm/PluginStoreWidget/components/PluginStoreWidget.js +23 -45
- package/esm/UCSCTrackHub/doConnect.js +12 -4
- package/esm/UCSCTrackHub/ucscTrackHub.d.ts +53 -36
- package/esm/UCSCTrackHub/ucscTrackHub.js +139 -158
- package/esm/UCSCTrackHub/util.d.ts +22 -0
- package/esm/UCSCTrackHub/util.js +33 -0
- package/esm/index.d.ts +2 -2
- package/package.json +14 -13
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import { jsx as _jsx, jsxs as _jsxs, Fragment as _Fragment } from "react/jsx-runtime";
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} })) : null, deleteDialogDetails ? (_jsx(DeleteConnectionDialog, { handleClose: () => {
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}, deleteDialogDetails: deleteDialogDetails, session: session })) : null, connectionManagerOpen ? (_jsx(ManageConnectionsDialog, { handleClose: () => {
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}, breakConnection: breakConnection, session: session })) : null, connectionToggleOpen ? (_jsx(ToggleConnectionsDialog, { handleClose: () => {
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setConnectionToggleOpen(false);
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}, session: session, breakConnection: breakConnection })) : null, facetedOpen ? (_jsx(FacetedDialog, { handleClose: () => {
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setFacetedOpen(false);
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}, model: model })) : null] })] }));
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export default HamburgerMenu;
|
|
@@ -1,7 +1,6 @@
|
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1
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-
import React from 'react';
|
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2
1
|
import type { HierarchicalTrackSelectorModel } from '../../model';
|
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declare const HierarchicalTrackSelectorHeader: ({ model, setHeaderHeight, }: {
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model: HierarchicalTrackSelectorModel;
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|
setHeaderHeight: (n: number) => void;
|
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|
-
}) =>
|
|
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|
+
}) => import("react/jsx-runtime").JSX.Element;
|
|
7
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|
export default HierarchicalTrackSelectorHeader;
|
|
@@ -1,4 +1,4 @@
|
|
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1
|
-
import
|
|
1
|
+
import { jsx as _jsx, jsxs as _jsxs } from "react/jsx-runtime";
|
|
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|
import ClearIcon from '@mui/icons-material/Clear';
|
|
3
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|
import { IconButton, InputAdornment, TextField } from '@mui/material';
|
|
4
4
|
import { observer } from 'mobx-react';
|
|
@@ -15,27 +15,19 @@ const useStyles = makeStyles()(theme => ({
|
|
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15
15
|
const SearchTracksTextField = observer(function ({ model, }) {
|
|
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16
|
const { filterText } = model;
|
|
17
17
|
const { classes } = useStyles();
|
|
18
|
-
return (
|
|
18
|
+
return (_jsx(TextField, { className: classes.searchBox, label: "Filter tracks", value: filterText, onChange: event => {
|
|
19
19
|
model.setFilterText(event.target.value);
|
|
20
20
|
}, fullWidth: true, slotProps: {
|
|
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|
input: {
|
|
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|
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endAdornment: (
|
|
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|
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React.createElement(IconButton, { onClick: () => {
|
|
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|
+
endAdornment: (_jsx(InputAdornment, { position: "end", children: _jsx(IconButton, { onClick: () => {
|
|
24
23
|
model.clearFilterText();
|
|
25
|
-
} },
|
|
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|
-
React.createElement(ClearIcon, null)))),
|
|
24
|
+
}, children: _jsx(ClearIcon, {}) }) })),
|
|
27
25
|
},
|
|
28
26
|
} }));
|
|
29
27
|
});
|
|
30
28
|
const HierarchicalTrackSelectorHeader = observer(function ({ model, setHeaderHeight, }) {
|
|
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|
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return (
|
|
29
|
+
return (_jsx("div", { ref: ref => {
|
|
32
30
|
setHeaderHeight((ref === null || ref === void 0 ? void 0 : ref.getBoundingClientRect().height) || 0);
|
|
33
|
-
}, "data-testid": "hierarchical_track_selector" },
|
|
34
|
-
React.createElement("div", { style: { display: 'flex' } },
|
|
35
|
-
React.createElement(HamburgerMenu, { model: model }),
|
|
36
|
-
React.createElement(ShoppingCart, { model: model }),
|
|
37
|
-
React.createElement(SearchTracksTextField, { model: model }),
|
|
38
|
-
React.createElement(RecentlyUsedTracks, { model: model }),
|
|
39
|
-
React.createElement(FavoriteTracks, { model: model }))));
|
|
31
|
+
}, "data-testid": "hierarchical_track_selector", children: _jsxs("div", { style: { display: 'flex' }, children: [_jsx(HamburgerMenu, { model: model }), _jsx(ShoppingCart, { model: model }), _jsx(SearchTracksTextField, { model: model }), _jsx(RecentlyUsedTracks, { model: model }), _jsx(FavoriteTracks, { model: model })] }) }));
|
|
40
32
|
});
|
|
41
33
|
export default HierarchicalTrackSelectorHeader;
|
|
@@ -1,9 +1,8 @@
|
|
|
1
|
-
import React from 'react';
|
|
2
1
|
import type { TreeNode } from '../../generateHierarchy';
|
|
3
2
|
import type { HierarchicalTrackSelectorModel } from '../../model';
|
|
4
3
|
declare const HierarchicalTree: ({ height, tree, model, }: {
|
|
5
4
|
height: number;
|
|
6
5
|
tree: TreeNode;
|
|
7
6
|
model: HierarchicalTrackSelectorModel;
|
|
8
|
-
}) =>
|
|
7
|
+
}) => import("react/jsx-runtime").JSX.Element;
|
|
9
8
|
export default HierarchicalTree;
|
|
@@ -1,4 +1,5 @@
|
|
|
1
|
-
import
|
|
1
|
+
import { jsx as _jsx, Fragment as _Fragment } from "react/jsx-runtime";
|
|
2
|
+
import { useCallback, useEffect, useMemo, useRef } from 'react';
|
|
2
3
|
import { getSession } from '@jbrowse/core/util';
|
|
3
4
|
import { observer } from 'mobx-react';
|
|
4
5
|
import { VariableSizeTree } from 'react-vtree';
|
|
@@ -57,7 +58,6 @@ const HierarchicalTree = observer(function HierarchicalTree({ height, tree, mode
|
|
|
57
58
|
useDefaultHeight: true,
|
|
58
59
|
});
|
|
59
60
|
}, [tree, filterText]);
|
|
60
|
-
return (
|
|
61
|
-
React.createElement(VariableSizeTree, { ref: treeRef, treeWalker: treeWalker, height: height }, Node)));
|
|
61
|
+
return (_jsx(_Fragment, { children: _jsx(VariableSizeTree, { ref: treeRef, treeWalker: treeWalker, height: height, children: Node }) }));
|
|
62
62
|
});
|
|
63
63
|
export default HierarchicalTree;
|
|
@@ -1,6 +1,5 @@
|
|
|
1
|
-
import React from 'react';
|
|
2
1
|
import type { HierarchicalTrackSelectorModel } from '../../model';
|
|
3
2
|
declare const RecentlyUsedTracks: ({ model, }: {
|
|
4
3
|
model: HierarchicalTrackSelectorModel;
|
|
5
|
-
}) =>
|
|
4
|
+
}) => import("react/jsx-runtime").JSX.Element | null;
|
|
6
5
|
export default RecentlyUsedTracks;
|
|
@@ -1,4 +1,4 @@
|
|
|
1
|
-
import
|
|
1
|
+
import { jsx as _jsx } from "react/jsx-runtime";
|
|
2
2
|
import HistoryIcon from '@mui/icons-material/History';
|
|
3
3
|
import { Badge, Tooltip } from '@mui/material';
|
|
4
4
|
import { observer } from 'mobx-react';
|
|
@@ -12,7 +12,7 @@ const useStyles = makeStyles()({
|
|
|
12
12
|
const RecentlyUsedTracks = observer(function ({ model, }) {
|
|
13
13
|
const { classes } = useStyles();
|
|
14
14
|
const { view, recentlyUsedCounter, recentlyUsedTracks } = model;
|
|
15
|
-
return view ? (
|
|
15
|
+
return view ? (_jsx(DropdownTrackSelector, { onClick: () => {
|
|
16
16
|
model.setRecentlyUsedCounter(0);
|
|
17
17
|
}, model: model, tracks: recentlyUsedTracks, extraMenuItems: recentlyUsedTracks.length
|
|
18
18
|
? [
|
|
@@ -29,12 +29,9 @@ const RecentlyUsedTracks = observer(function ({ model, }) {
|
|
|
29
29
|
label: 'No recently used',
|
|
30
30
|
onClick: () => { },
|
|
31
31
|
},
|
|
32
|
-
] },
|
|
33
|
-
React.createElement(Tooltip, { title: "Recently used tracks" },
|
|
34
|
-
React.createElement(Badge, { classes: { badge: classes.smallBadge }, anchorOrigin: {
|
|
32
|
+
], children: _jsx(Tooltip, { title: "Recently used tracks", children: _jsx(Badge, { classes: { badge: classes.smallBadge }, anchorOrigin: {
|
|
35
33
|
vertical: 'bottom',
|
|
36
34
|
horizontal: 'right',
|
|
37
|
-
}, color: "secondary", badgeContent: recentlyUsedCounter }
|
|
38
|
-
React.createElement(HistoryIcon, null))))) : null;
|
|
35
|
+
}, color: "secondary", badgeContent: recentlyUsedCounter, children: _jsx(HistoryIcon, {}) }) }) })) : null;
|
|
39
36
|
});
|
|
40
37
|
export default RecentlyUsedTracks;
|
|
@@ -1,7 +1,6 @@
|
|
|
1
|
-
import React from 'react';
|
|
2
1
|
import type { NodeData } from '../util';
|
|
3
2
|
export default function Category({ isOpen, setOpen, data, }: {
|
|
4
3
|
isOpen: boolean;
|
|
5
4
|
setOpen: (arg: boolean) => void;
|
|
6
5
|
data: NodeData;
|
|
7
|
-
}):
|
|
6
|
+
}): import("react/jsx-runtime").JSX.Element;
|
|
@@ -1,4 +1,5 @@
|
|
|
1
|
-
import
|
|
1
|
+
import { jsx as _jsx, jsxs as _jsxs } from "react/jsx-runtime";
|
|
2
|
+
import { useState } from 'react';
|
|
2
3
|
import JBrowseMenu from '@jbrowse/core/ui/Menu';
|
|
3
4
|
import ArrowDropDownIcon from '@mui/icons-material/ArrowDropDown';
|
|
4
5
|
import ArrowRightIcon from '@mui/icons-material/ArrowRight';
|
|
@@ -19,62 +20,56 @@ export default function Category({ isOpen, setOpen, data, }) {
|
|
|
19
20
|
const { classes } = useStyles();
|
|
20
21
|
const [menuEl, setMenuEl] = useState(null);
|
|
21
22
|
const { menuItems = [], name, model, id, tree } = data;
|
|
22
|
-
return (
|
|
23
|
+
return (_jsxs("div", { className: classes.accordionText, onClick: () => {
|
|
23
24
|
if (!menuEl) {
|
|
24
25
|
data.toggleCollapse(id);
|
|
25
26
|
setOpen(!isOpen);
|
|
26
27
|
}
|
|
27
|
-
} },
|
|
28
|
-
|
|
29
|
-
|
|
30
|
-
|
|
31
|
-
|
|
32
|
-
|
|
33
|
-
|
|
34
|
-
|
|
35
|
-
|
|
36
|
-
|
|
37
|
-
{
|
|
38
|
-
label: 'Add to selection',
|
|
39
|
-
onClick: () => {
|
|
40
|
-
const r = treeToMap(tree).get(id);
|
|
41
|
-
model.addToSelection(getAllChildren(r));
|
|
28
|
+
}, children: [_jsxs(Typography, { "data-testid": `htsCategory-${name}`, children: [isOpen ? _jsx(ArrowDropDownIcon, {}) : _jsx(ArrowRightIcon, {}), name, _jsx(IconButton, { onClick: event => {
|
|
29
|
+
setMenuEl(event.currentTarget);
|
|
30
|
+
event.stopPropagation();
|
|
31
|
+
}, className: classes.contrastColor, children: _jsx(MoreHorizIcon, {}) })] }), menuEl ? (_jsx(JBrowseMenu, { anchorEl: menuEl, menuItems: [
|
|
32
|
+
{
|
|
33
|
+
label: 'Add to selection',
|
|
34
|
+
onClick: () => {
|
|
35
|
+
const r = treeToMap(tree).get(id);
|
|
36
|
+
model.addToSelection(getAllChildren(r));
|
|
37
|
+
},
|
|
42
38
|
},
|
|
43
|
-
|
|
44
|
-
|
|
45
|
-
|
|
46
|
-
|
|
47
|
-
|
|
48
|
-
|
|
39
|
+
{
|
|
40
|
+
label: 'Remove from selection',
|
|
41
|
+
onClick: () => {
|
|
42
|
+
const r = treeToMap(tree).get(id);
|
|
43
|
+
model.removeFromSelection(getAllChildren(r));
|
|
44
|
+
},
|
|
49
45
|
},
|
|
50
|
-
|
|
51
|
-
|
|
52
|
-
|
|
53
|
-
|
|
54
|
-
|
|
55
|
-
|
|
56
|
-
|
|
57
|
-
|
|
46
|
+
{
|
|
47
|
+
label: 'Show all tracks',
|
|
48
|
+
onClick: () => {
|
|
49
|
+
var _a;
|
|
50
|
+
for (const entry of ((_a = treeToMap(tree).get(id)) === null || _a === void 0 ? void 0 : _a.children) || []) {
|
|
51
|
+
if (entry.type === 'track') {
|
|
52
|
+
model.view.showTrack(entry.trackId);
|
|
53
|
+
}
|
|
58
54
|
}
|
|
59
|
-
}
|
|
55
|
+
},
|
|
60
56
|
},
|
|
61
|
-
|
|
62
|
-
|
|
63
|
-
|
|
64
|
-
|
|
65
|
-
|
|
66
|
-
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-
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{
|
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label: 'Hide all tracks',
|
|
59
|
+
onClick: () => {
|
|
60
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+
var _a;
|
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61
|
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for (const entry of ((_a = treeToMap(tree).get(id)) === null || _a === void 0 ? void 0 : _a.children) || []) {
|
|
62
|
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if (entry.type === 'track') {
|
|
63
|
+
model.view.hideTrack(entry.trackId);
|
|
64
|
+
}
|
|
69
65
|
}
|
|
70
|
-
}
|
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66
|
+
},
|
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71
67
|
},
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|
72
|
-
|
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73
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|
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76
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-
|
|
77
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|
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78
|
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|
|
79
|
-
} })) : null));
|
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68
|
+
...menuItems,
|
|
69
|
+
], onMenuItemClick: (_event, callback) => {
|
|
70
|
+
callback();
|
|
71
|
+
setMenuEl(null);
|
|
72
|
+
}, open: Boolean(menuEl), onClose: () => {
|
|
73
|
+
setMenuEl(null);
|
|
74
|
+
} })) : null] }));
|
|
80
75
|
}
|
|
@@ -1,4 +1,3 @@
|
|
|
1
|
-
import React from 'react';
|
|
2
1
|
import type { NodeData } from '../util';
|
|
3
2
|
import type { AnyConfigurationModel } from '@jbrowse/core/configuration';
|
|
4
3
|
export interface InfoArgs {
|
|
@@ -8,4 +7,4 @@ export interface InfoArgs {
|
|
|
8
7
|
}
|
|
9
8
|
export default function TrackLabel({ data }: {
|
|
10
9
|
data: NodeData;
|
|
11
|
-
}):
|
|
10
|
+
}): import("react/jsx-runtime").JSX.Element;
|
|
@@ -1,4 +1,4 @@
|
|
|
1
|
-
import
|
|
1
|
+
import { jsx as _jsx, Fragment as _Fragment, jsxs as _jsxs } from "react/jsx-runtime";
|
|
2
2
|
import { readConfObject } from '@jbrowse/core/configuration';
|
|
3
3
|
import SanitizedHTML from '@jbrowse/core/ui/SanitizedHTML';
|
|
4
4
|
import { Checkbox, FormControlLabel, Tooltip } from '@mui/material';
|
|
@@ -21,15 +21,21 @@ const useStyles = makeStyles()(theme => ({
|
|
|
21
21
|
}));
|
|
22
22
|
export default function TrackLabel({ data }) {
|
|
23
23
|
const { classes } = useStyles();
|
|
24
|
-
const { checked, conf, model, drawerPosition, id, trackId, name,
|
|
24
|
+
const { checked, conf, model, drawerPosition, id, trackId, name, selected, onChange, } = data;
|
|
25
25
|
const description = readConfObject(conf, 'description');
|
|
26
|
-
return (
|
|
27
|
-
|
|
28
|
-
|
|
29
|
-
|
|
30
|
-
|
|
31
|
-
|
|
32
|
-
|
|
33
|
-
|
|
34
|
-
|
|
26
|
+
return (_jsxs(_Fragment, { children: [_jsx(Tooltip, { title: description + (selected ? ' (in selection)' : ''), placement: drawerPosition === 'left' ? 'right' : 'left', children: _jsx(FormControlLabel, { className: classes.checkboxLabel, onClick: event => {
|
|
27
|
+
if (event.ctrlKey || event.metaKey) {
|
|
28
|
+
if (selected) {
|
|
29
|
+
model.removeFromSelection([conf]);
|
|
30
|
+
}
|
|
31
|
+
else {
|
|
32
|
+
model.addToSelection([conf]);
|
|
33
|
+
}
|
|
34
|
+
event.preventDefault();
|
|
35
|
+
}
|
|
36
|
+
}, control: _jsx(Checkbox, { className: classes.compactCheckbox, checked: checked, onChange: () => {
|
|
37
|
+
onChange(trackId);
|
|
38
|
+
}, disabled: isUnsupported(name), inputProps: {
|
|
39
|
+
'data-testid': `htsTrackEntry-${id}`,
|
|
40
|
+
} }), label: _jsx("div", { "data-testid": `htsTrackLabel-${id}`, className: selected ? classes.selected : undefined, children: _jsx(SanitizedHTML, { html: name }) }) }) }), _jsx(TrackLabelMenu, { model: model, trackId: trackId, id: id, conf: conf })] }));
|
|
35
41
|
}
|
|
@@ -1,4 +1,3 @@
|
|
|
1
|
-
import React from 'react';
|
|
2
1
|
import type { HierarchicalTrackSelectorModel } from '../../model';
|
|
3
2
|
import type { AnyConfigurationModel } from '@jbrowse/core/configuration';
|
|
4
3
|
declare const TrackLabelMenu: ({ id, trackId, stopPropagation, model, setOpen, conf, }: {
|
|
@@ -8,5 +7,5 @@ declare const TrackLabelMenu: ({ id, trackId, stopPropagation, model, setOpen, c
|
|
|
8
7
|
conf: AnyConfigurationModel;
|
|
9
8
|
setOpen?: (arg: boolean) => void;
|
|
10
9
|
model: HierarchicalTrackSelectorModel;
|
|
11
|
-
}) =>
|
|
10
|
+
}) => import("react/jsx-runtime").JSX.Element;
|
|
12
11
|
export default TrackLabelMenu;
|
|
@@ -1,4 +1,4 @@
|
|
|
1
|
-
import
|
|
1
|
+
import { jsx as _jsx } from "react/jsx-runtime";
|
|
2
2
|
import CascadingMenuButton from '@jbrowse/core/ui/CascadingMenuButton';
|
|
3
3
|
import { getSession } from '@jbrowse/core/util';
|
|
4
4
|
import MoreHorizIcon from '@mui/icons-material/MoreHoriz';
|
|
@@ -13,7 +13,7 @@ const useStyles = makeStyles()({
|
|
|
13
13
|
const TrackLabelMenu = function ({ id, trackId, stopPropagation, model, setOpen, conf, }) {
|
|
14
14
|
var _a, _b;
|
|
15
15
|
const { classes } = useStyles();
|
|
16
|
-
return (
|
|
16
|
+
return (_jsx(CascadingMenuButton, { className: classes.cascadingStyle, stopPropagation: stopPropagation, setOpen: setOpen, "data-testid": `htsTrackEntryMenu-${id}`, menuItems: [
|
|
17
17
|
...(((_b = (_a = getSession(model)).getTrackActionMenuItems) === null || _b === void 0 ? void 0 : _b.call(_a, conf)) || []),
|
|
18
18
|
model.isFavorite(trackId)
|
|
19
19
|
? {
|
|
@@ -46,7 +46,6 @@ const TrackLabelMenu = function ({ id, trackId, stopPropagation, model, setOpen,
|
|
|
46
46
|
},
|
|
47
47
|
]
|
|
48
48
|
: []),
|
|
49
|
-
] }
|
|
50
|
-
React.createElement(MoreHorizIcon, null)));
|
|
49
|
+
], children: _jsx(MoreHorizIcon, {}) }));
|
|
51
50
|
};
|
|
52
51
|
export default TrackLabelMenu;
|
|
@@ -1,4 +1,3 @@
|
|
|
1
|
-
import React from 'react';
|
|
2
1
|
import type { NodeData } from '../util';
|
|
3
2
|
export default function Node({ data, isOpen, style, setOpen, }: {
|
|
4
3
|
data: NodeData;
|
|
@@ -7,4 +6,4 @@ export default function Node({ data, isOpen, style, setOpen, }: {
|
|
|
7
6
|
height: number;
|
|
8
7
|
};
|
|
9
8
|
setOpen: (arg: boolean) => void;
|
|
10
|
-
}):
|
|
9
|
+
}): import("react/jsx-runtime").JSX.Element;
|
|
@@ -1,4 +1,4 @@
|
|
|
1
|
-
import
|
|
1
|
+
import { jsx as _jsx, jsxs as _jsxs } from "react/jsx-runtime";
|
|
2
2
|
import { makeStyles } from 'tss-react/mui';
|
|
3
3
|
import Category from './TrackCategory';
|
|
4
4
|
import TrackLabel from './TrackLabel';
|
|
@@ -28,12 +28,9 @@ export default function Node({ data, isOpen, style, setOpen, }) {
|
|
|
28
28
|
const { classes } = useStyles();
|
|
29
29
|
const width = 10;
|
|
30
30
|
const marginLeft = nestingLevel * width + (isLeaf ? width : 0);
|
|
31
|
-
return (
|
|
32
|
-
|
|
33
|
-
|
|
34
|
-
|
|
35
|
-
|
|
36
|
-
width: '100%',
|
|
37
|
-
} },
|
|
38
|
-
React.createElement("div", { className: !isLeaf ? classes.accordionColor : undefined }, !isLeaf ? (React.createElement(Category, { isOpen: isOpen, data: data, setOpen: setOpen })) : (React.createElement(TrackLabel, { data: data }))))));
|
|
31
|
+
return (_jsxs("div", { style: style, className: !isLeaf ? classes.accordionBase : undefined, children: [new Array(nestingLevel).fill(0).map((_, idx) => (_jsx("div", { style: { left: idx * width + 4, height: style === null || style === void 0 ? void 0 : style.height }, className: classes.nestingLevelMarker }, `mark-${idx}`))), _jsx("div", { className: !isLeaf ? classes.accordionCard : undefined, style: {
|
|
32
|
+
marginLeft,
|
|
33
|
+
whiteSpace: 'nowrap',
|
|
34
|
+
width: '100%',
|
|
35
|
+
}, children: _jsx("div", { className: !isLeaf ? classes.accordionColor : undefined, children: !isLeaf ? (_jsx(Category, { isOpen: isOpen, data: data, setOpen: setOpen })) : (_jsx(TrackLabel, { data: data })) }) })] }));
|
|
39
36
|
}
|
|
@@ -1,8 +1,6 @@
|
|
|
1
1
|
export function getAllChildren(subtree) {
|
|
2
2
|
return (subtree === null || subtree === void 0 ? void 0 : subtree.type) === 'category'
|
|
3
|
-
? subtree.children
|
|
4
|
-
.map(t => (t.type === 'category' ? getAllChildren(t) : t.conf))
|
|
5
|
-
.flat(Number.POSITIVE_INFINITY)
|
|
3
|
+
? subtree.children.flatMap(t => t.type === 'category' ? getAllChildren(t) : t.conf)
|
|
6
4
|
: [];
|
|
7
5
|
}
|
|
8
6
|
export function treeToMap(tree, map = new Map()) {
|
|
@@ -79,3 +79,4 @@ export declare function facetedStateTreeF(): import("mobx-state-tree").IModelTyp
|
|
|
79
79
|
}, import("mobx-state-tree")._NotCustomized, import("mobx-state-tree")._NotCustomized>;
|
|
80
80
|
export type FacetedStateModel = ReturnType<typeof facetedStateTreeF>;
|
|
81
81
|
export type FacetedModel = Instance<FacetedStateModel>;
|
|
82
|
+
export type FacetedRow = FacetedModel['filteredRows'][0];
|