@jbrowse/plugin-data-management 1.7.7 → 1.7.10

package/dist/AddConnectionWidget/components/AddConnectionWidget.test.js

@@ -151,7 +151,7 @@ describe('<AddConnectionWidget />', function () {
     }, _callee);
   })));
   it('can handle a custom JBrowse 1 data directory URL', /*#__PURE__*/(0, _asyncToGenerator2.default)( /*#__PURE__*/_regenerator.default.mark(function _callee2() {
-    var mockFetch, _render3, findByTestId, getAllByRole, findByPlaceholderText, findByText, findByDisplayValue;
+    var mockFetch, _render3, findByTestId, getAllByRole, findByText, findByPlaceholderText, findByDisplayValue;
 
     return _regenerator.default.wrap(function _callee2$(_context2) {
       while (1) {
@@ -175,7 +175,7 @@ describe('<AddConnectionWidget />', function () {
             jest.spyOn(global, 'fetch').mockImplementation(mockFetch);
             _render3 = (0, _react.render)( /*#__PURE__*/_react2.default.createElement(_AddConnectionWidget.default, {
               model: model
-            })), findByTestId = _render3.findByTestId, getAllByRole = _render3.getAllByRole, findByPlaceholderText = _render3.findByPlaceholderText, findByText = _render3.findByText, findByDisplayValue = _render3.findByDisplayValue;
+            })), findByTestId = _render3.findByTestId, getAllByRole = _render3.getAllByRole, findByText = _render3.findByText, findByPlaceholderText = _render3.findByPlaceholderText, findByDisplayValue = _render3.findByDisplayValue;
             expect(session.connections.length).toBe(0);
 
             _react.fireEvent.mouseDown(getAllByRole('button')[0]);
@@ -228,39 +228,48 @@ describe('<AddConnectionWidget />', function () {
 
             _context2.t10 = _react.fireEvent;
             _context2.next = 30;
-            return findByPlaceholderText('add new');
+            return findByText('Add item');
 
           case 30:
             _context2.t11 = _context2.sent;
-            _context2.t12 = {
+
+            _context2.t10.click.call(_context2.t10, _context2.t11);
+
+            _context2.t12 = _react.fireEvent;
+            _context2.next = 35;
+            return findByPlaceholderText('add new');
+
+          case 35:
+            _context2.t13 = _context2.sent;
+            _context2.t14 = {
               target: {
                 value: 'volMyt1'
               }
             };
 
-            _context2.t10.change.call(_context2.t10, _context2.t11, _context2.t12);
-
-            _context2.t13 = _react.fireEvent;
-            _context2.next = 36;
-            return findByTestId('stringArrayAdd-assemblyNames');
-
-          case 36:
-            _context2.t14 = _context2.sent;
-
-            _context2.t13.click.call(_context2.t13, _context2.t14);
+            _context2.t12.change.call(_context2.t12, _context2.t13, _context2.t14);
 
             _context2.t15 = _react.fireEvent;
             _context2.next = 41;
-            return findByTestId('addConnectionNext');
+            return findByTestId('stringArrayAdd-assemblyNames');
 
           case 41:
             _context2.t16 = _context2.sent;
 
             _context2.t15.click.call(_context2.t15, _context2.t16);
 
+            _context2.t17 = _react.fireEvent;
+            _context2.next = 46;
+            return findByTestId('addConnectionNext');
+
+          case 46:
+            _context2.t18 = _context2.sent;
+
+            _context2.t17.click.call(_context2.t17, _context2.t18);
+
             expect(session.sessionConnections.length).toBe(1);
 
-          case 44:
+          case 49:
           case "end":
             return _context2.stop();
         }

package/dist/AddConnectionWidget/model.d.ts

@@ -1,4 +1,4 @@
-declare var _default: import("mobx-state-tree").IModelType<{
+declare const _default: import("mobx-state-tree").IModelType<{
     id: import("mobx-state-tree").IOptionalIType<import("mobx-state-tree").ISimpleType<string>, [undefined]>;
     type: import("mobx-state-tree").ISimpleType<"AddConnectionWidget">;
 }, {}, import("mobx-state-tree")._NotCustomized, import("mobx-state-tree")._NotCustomized>;

package/dist/AddTrackWidget/index.test.js

@@ -133,6 +133,7 @@ describe('tests on an LGV type system with view.assemblyNames, using URL', funct
     window.location = realLocation;
   });
   it('adds relative URL (BAM)', function () {
+    console.warn = jest.fn();
     var _session = session,
         widget = _session.widget;
     widget.setTrackData({

package/dist/AddTrackWidget/model.js

@@ -78,7 +78,7 @@ function f(pluginManager) {
         self.indexTrackData = undefined;
         self.trackData = undefined;
         self.textIndexingConf = undefined;
-        self.textIndexTrack = false;
+        self.textIndexTrack = true;
       }
     };
   }).views(function (self) {

package/dist/ucsc-trackhub/configSchema.d.ts

@@ -1,2 +1,2 @@
-declare var _default: import("@jbrowse/core/configuration").AnyConfigurationSchemaType;
+declare const _default: import("@jbrowse/core/configuration").AnyConfigurationSchemaType;
 export default _default;

package/dist/ucsc-trackhub/ucscAssemblies.d.ts

@@ -1,2 +1,2 @@
-declare var _default: string[];
+declare const _default: string[];
 export default _default;

package/package.json

@@ -1,6 +1,6 @@
 {
   "name": "@jbrowse/plugin-data-management",
-  "version": "1.7.7",
+  "version": "1.7.10",
   "description": "JBrowse 2 linear genome view",
   "keywords": [
     "jbrowse",
@@ -54,5 +54,5 @@
   "publishConfig": {
     "access": "public"
   },
-  "gitHead": "2c26e04ae942c380bf2f5b79ef7a49cc32b7bfed"
+  "gitHead": "02d8c1e88e5603ea5855faed4ccb814e28071b32"
 }

package/src/AddConnectionWidget/components/AddConnectionWidget.test.js

@@ -104,8 +104,8 @@ type bigWig
     const {
       findByTestId,
       getAllByRole,
-      findByPlaceholderText,
       findByText,
+      findByPlaceholderText,
       findByDisplayValue,
     } = render(<AddConnectionWidget model={model} />)
     expect(session.connections.length).toBe(0)
@@ -121,6 +121,7 @@ type bigWig
         target: { value: 'http://test.com/jbrowse/data/' },
       },
     )
+    fireEvent.click(await findByText('Add item'))
     fireEvent.change(await findByPlaceholderText('add new'), {
       target: { value: 'volMyt1' },
     })

package/src/AddTrackWidget/index.test.jsx

@@ -89,6 +89,7 @@ describe('tests on an LGV type system with view.assemblyNames, using URL', () =>
   })
 
   it('adds relative URL (BAM)', () => {
+    console.warn = jest.fn()
     const { widget } = session
     widget.setTrackData({
       uri: 'volvox-sorted.bam',

package/src/AddTrackWidget/model.ts

@@ -82,7 +82,7 @@ export default function f(pluginManager: PluginManager) {
         self.indexTrackData = undefined
         self.trackData = undefined
         self.textIndexingConf = undefined
-        self.textIndexTrack = false
+        self.textIndexTrack = true
       },
     }))
     .views(self => ({