@jbrowse/plugin-data-management 1.7.3 → 1.7.4

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Files changed (46) hide show
  1. package/dist/AddConnectionWidget/components/AddConnectionWidget.js +17 -17
  2. package/dist/AddConnectionWidget/components/AddConnectionWidget.test.js +7 -7
  3. package/dist/AddConnectionWidget/components/ConfigureConnection.js +6 -6
  4. package/dist/AddConnectionWidget/components/ConnectionTypeSelect.js +8 -8
  5. package/dist/AddConnectionWidget/index.js +1 -1
  6. package/dist/AddConnectionWidget/model.js +2 -2
  7. package/dist/AddTrackWidget/components/AddTrackWidget.js +20 -20
  8. package/dist/AddTrackWidget/components/AddTrackWidget.test.js +7 -7
  9. package/dist/AddTrackWidget/components/ConfirmTrack.js +28 -28
  10. package/dist/AddTrackWidget/components/TrackSourceSelect.js +6 -6
  11. package/dist/AddTrackWidget/index.js +1 -1
  12. package/dist/AddTrackWidget/index.test.js +13 -13
  13. package/dist/AddTrackWidget/model.js +2 -2
  14. package/dist/AssemblyManager/AssemblyAddForm.js +36 -36
  15. package/dist/AssemblyManager/AssemblyEditor.js +3 -3
  16. package/dist/AssemblyManager/AssemblyManager.js +18 -18
  17. package/dist/AssemblyManager/AssemblyManager.test.js +6 -6
  18. package/dist/AssemblyManager/AssemblyTable.js +15 -15
  19. package/dist/AssemblyManager/index.js +1 -1
  20. package/dist/HierarchicalTrackSelectorWidget/components/CloseConnectionDialog.js +8 -8
  21. package/dist/HierarchicalTrackSelectorWidget/components/DeleteConnectionDialog.js +5 -5
  22. package/dist/HierarchicalTrackSelectorWidget/components/HierarchicalTrackSelector.js +58 -58
  23. package/dist/HierarchicalTrackSelectorWidget/components/HierarchicalTrackSelector.test.js +10 -10
  24. package/dist/HierarchicalTrackSelectorWidget/components/ManageConnectionsDialog.js +11 -11
  25. package/dist/HierarchicalTrackSelectorWidget/components/ToggleConnectionsDialog.js +9 -9
  26. package/dist/HierarchicalTrackSelectorWidget/index.js +1 -1
  27. package/dist/HierarchicalTrackSelectorWidget/model.js +8 -8
  28. package/dist/PluginStoreWidget/components/CustomPluginForm.js +24 -24
  29. package/dist/PluginStoreWidget/components/InstalledPlugin.js +14 -14
  30. package/dist/PluginStoreWidget/components/InstalledPluginsList.js +5 -5
  31. package/dist/PluginStoreWidget/components/PluginCard.js +13 -13
  32. package/dist/PluginStoreWidget/components/PluginStoreWidget.js +31 -31
  33. package/dist/PluginStoreWidget/components/PluginStoreWidget.test.js +13 -13
  34. package/dist/PluginStoreWidget/index.js +2 -2
  35. package/dist/PluginStoreWidget/model.js +1 -1
  36. package/dist/SetDefaultSession/SetDefaultSession.js +7 -7
  37. package/dist/SetDefaultSession/SetDefaultSession.test.js +3 -3
  38. package/dist/SetDefaultSession/index.js +1 -1
  39. package/dist/index.js +15 -15
  40. package/dist/index.test.js +2 -2
  41. package/dist/ucsc-trackhub/configSchema.js +2 -2
  42. package/dist/ucsc-trackhub/index.js +2 -2
  43. package/dist/ucsc-trackhub/model.js +7 -7
  44. package/dist/ucsc-trackhub/ucscAssemblies.js +2 -2
  45. package/dist/ucsc-trackhub/ucscTrackHub.js +9 -9
  46. package/package.json +3 -3
package/dist/PluginStoreWidget/components/CustomPluginForm.js CHANGED
@@ -7,7 +7,7 @@ var _typeof = require("@babel/runtime/helpers/typeof");
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  Object.defineProperty(exports, "__esModule", {
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  value: true
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  });
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- exports["default"] = void 0;
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+ exports.default = void 0;
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  var _defineProperty2 = _interopRequireDefault(require("@babel/runtime/helpers/defineProperty"));
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@@ -31,7 +31,7 @@ var _ExpandMore = _interopRequireDefault(require("@material-ui/icons/ExpandMore"
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  function _getRequireWildcardCache(nodeInterop) { if (typeof WeakMap !== "function") return null; var cacheBabelInterop = new WeakMap(); var cacheNodeInterop = new WeakMap(); return (_getRequireWildcardCache = function _getRequireWildcardCache(nodeInterop) { return nodeInterop ? cacheNodeInterop : cacheBabelInterop; })(nodeInterop); }
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- function _interopRequireWildcard(obj, nodeInterop) { if (!nodeInterop && obj && obj.__esModule) { return obj; } if (obj === null || _typeof(obj) !== "object" && typeof obj !== "function") { return { "default": obj }; } var cache = _getRequireWildcardCache(nodeInterop); if (cache && cache.has(obj)) { return cache.get(obj); } var newObj = {}; var hasPropertyDescriptor = Object.defineProperty && Object.getOwnPropertyDescriptor; for (var key in obj) { if (key !== "default" && Object.prototype.hasOwnProperty.call(obj, key)) { var desc = hasPropertyDescriptor ? Object.getOwnPropertyDescriptor(obj, key) : null; if (desc && (desc.get || desc.set)) { Object.defineProperty(newObj, key, desc); } else { newObj[key] = obj[key]; } } } newObj["default"] = obj; if (cache) { cache.set(obj, newObj); } return newObj; }
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+ function _interopRequireWildcard(obj, nodeInterop) { if (!nodeInterop && obj && obj.__esModule) { return obj; } if (obj === null || _typeof(obj) !== "object" && typeof obj !== "function") { return { default: obj }; } var cache = _getRequireWildcardCache(nodeInterop); if (cache && cache.has(obj)) { return cache.get(obj); } var newObj = {}; var hasPropertyDescriptor = Object.defineProperty && Object.getOwnPropertyDescriptor; for (var key in obj) { if (key !== "default" && Object.prototype.hasOwnProperty.call(obj, key)) { var desc = hasPropertyDescriptor ? Object.getOwnPropertyDescriptor(obj, key) : null; if (desc && (desc.get || desc.set)) { Object.defineProperty(newObj, key, desc); } else { newObj[key] = obj[key]; } } } newObj.default = obj; if (cache) { cache.set(obj, newObj); } return newObj; }
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  // icons
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  var useStyles = (0, _core.makeStyles)(function (theme) {
@@ -65,27 +65,27 @@ function CustomPluginForm(_ref) {
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  var classes = useStyles();
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  var _useState = (0, _react.useState)(''),
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- _useState2 = (0, _slicedToArray2["default"])(_useState, 2),
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+ _useState2 = (0, _slicedToArray2.default)(_useState, 2),
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  umdPluginName = _useState2[0],
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  setUMDPluginName = _useState2[1];
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  var _useState3 = (0, _react.useState)(''),
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- _useState4 = (0, _slicedToArray2["default"])(_useState3, 2),
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+ _useState4 = (0, _slicedToArray2.default)(_useState3, 2),
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  umdPluginUrl = _useState4[0],
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  setUMDPluginUrl = _useState4[1];
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  var _useState5 = (0, _react.useState)(''),
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- _useState6 = (0, _slicedToArray2["default"])(_useState5, 2),
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+ _useState6 = (0, _slicedToArray2.default)(_useState5, 2),
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  esmPluginUrl = _useState6[0],
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  setESMPluginUrl = _useState6[1];
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  var _useState7 = (0, _react.useState)(''),
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- _useState8 = (0, _slicedToArray2["default"])(_useState7, 2),
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+ _useState8 = (0, _slicedToArray2.default)(_useState7, 2),
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  cjsPluginUrl = _useState8[0],
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  setCJSPluginUrl = _useState8[1];
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  var _useState9 = (0, _react.useState)(false),
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- _useState10 = (0, _slicedToArray2["default"])(_useState9, 2),
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+ _useState10 = (0, _slicedToArray2.default)(_useState9, 2),
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  advancedOptionsOpen = _useState10[0],
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  setAdvancedOptionsOpen = _useState10[1];
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@@ -150,61 +150,61 @@ function CustomPluginForm(_ref) {
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  onClose();
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  }
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- return /*#__PURE__*/_react["default"].createElement(_core.Dialog, {
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+ return /*#__PURE__*/_react.default.createElement(_core.Dialog, {
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  open: open,
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  onClose: handleClose
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- }, /*#__PURE__*/_react["default"].createElement(_core.DialogTitle, null, "Add custom plugin", /*#__PURE__*/_react["default"].createElement(_IconButton["default"], {
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+ }, /*#__PURE__*/_react.default.createElement(_core.DialogTitle, null, "Add custom plugin", /*#__PURE__*/_react.default.createElement(_IconButton.default, {
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  size: "medium",
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  className: classes.closeButton,
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  onClick: function onClick() {
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  return onClose();
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  }
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- }, /*#__PURE__*/_react["default"].createElement(_Close["default"], null))), /*#__PURE__*/_react["default"].createElement("form", {
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+ }, /*#__PURE__*/_react.default.createElement(_Close.default, null))), /*#__PURE__*/_react.default.createElement("form", {
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  onSubmit: handleSubmit
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- }, /*#__PURE__*/_react["default"].createElement(_core.DialogContent, {
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+ }, /*#__PURE__*/_react.default.createElement(_core.DialogContent, {
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  className: classes.dialogContent
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- }, /*#__PURE__*/_react["default"].createElement(_core.DialogContentText, null, "Enter the name of the plugin and its URL. The name should match what is defined in the plugin's build."), /*#__PURE__*/_react["default"].createElement(_core.TextField, {
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+ }, /*#__PURE__*/_react.default.createElement(_core.DialogContentText, null, "Enter the name of the plugin and its URL. The name should match what is defined in the plugin's build."), /*#__PURE__*/_react.default.createElement(_core.TextField, {
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  id: "umd-name-input",
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  name: "umdName",
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  label: "Plugin name",
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  variant: "outlined",
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  value: umdPluginName,
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  onChange: handleChange
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- }), /*#__PURE__*/_react["default"].createElement(_core.TextField, {
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+ }), /*#__PURE__*/_react.default.createElement(_core.TextField, {
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  id: "umd-url-input",
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  name: "umdUrl",
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  label: "Plugin URL",
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  variant: "outlined",
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  value: umdPluginUrl,
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  onChange: handleChange
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- }), /*#__PURE__*/_react["default"].createElement(_core.DialogContentText, {
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+ }), /*#__PURE__*/_react.default.createElement(_core.DialogContentText, {
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  onClick: handleOpenAdvancedOptions
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- }, /*#__PURE__*/_react["default"].createElement(_IconButton["default"], {
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- className: (0, _clsx2["default"])(classes.expand, (0, _defineProperty2["default"])({}, classes.expandOpen, advancedOptionsOpen)),
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+ }, /*#__PURE__*/_react.default.createElement(_IconButton.default, {
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+ className: (0, _clsx2.default)(classes.expand, (0, _defineProperty2.default)({}, classes.expandOpen, advancedOptionsOpen)),
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  "aria-expanded": advancedOptionsOpen,
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  "aria-label": "show more"
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- }, /*#__PURE__*/_react["default"].createElement(_ExpandMore["default"], null)), "Advanced options"), /*#__PURE__*/_react["default"].createElement(_core.Collapse, {
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- "in": advancedOptionsOpen
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- }, /*#__PURE__*/_react["default"].createElement("div", {
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+ }, /*#__PURE__*/_react.default.createElement(_ExpandMore.default, null)), "Advanced options"), /*#__PURE__*/_react.default.createElement(_core.Collapse, {
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+ in: advancedOptionsOpen
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+ }, /*#__PURE__*/_react.default.createElement("div", {
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  className: classes.dialogContent
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- }, /*#__PURE__*/_react["default"].createElement(_core.DialogContentText, null, "The above fields assume that the plugin is built in UMD format. If your plugin is in another format, or you have additional builds you want to add (such as a CJS build for using NodeJS APIs in desktop), you can enter the URLs for those builds below."), /*#__PURE__*/_react["default"].createElement(_core.TextField, {
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+ }, /*#__PURE__*/_react.default.createElement(_core.DialogContentText, null, "The above fields assume that the plugin is built in UMD format. If your plugin is in another format, or you have additional builds you want to add (such as a CJS build for using NodeJS APIs in desktop), you can enter the URLs for those builds below."), /*#__PURE__*/_react.default.createElement(_core.TextField, {
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  id: "esm-url-input",
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  name: "esmUrl",
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  label: "ESM build URL",
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  variant: "outlined",
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  value: esmPluginUrl,
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  onChange: handleChange
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- }), /*#__PURE__*/_react["default"].createElement(_core.TextField, {
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+ }), /*#__PURE__*/_react.default.createElement(_core.TextField, {
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  id: "cjs-url-input",
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  name: "cjsUrl",
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  label: "CJS build URL",
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  variant: "outlined",
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  value: cjsPluginUrl,
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  onChange: handleChange
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- })))), /*#__PURE__*/_react["default"].createElement(_core.DialogActions, null, /*#__PURE__*/_react["default"].createElement(_core.Button, {
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+ })))), /*#__PURE__*/_react.default.createElement(_core.DialogActions, null, /*#__PURE__*/_react.default.createElement(_core.Button, {
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  variant: "contained",
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  onClick: handleClose
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- }, "Cancel"), /*#__PURE__*/_react["default"].createElement(_core.Button, {
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+ }, "Cancel"), /*#__PURE__*/_react.default.createElement(_core.Button, {
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  variant: "contained",
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  color: "primary",
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  onClick: handleSubmit,
@@ -214,4 +214,4 @@ function CustomPluginForm(_ref) {
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  var _default = (0, _mobxReact.observer)(CustomPluginForm);
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- exports["default"] = _default;
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+ exports.default = _default;
package/dist/PluginStoreWidget/components/InstalledPlugin.js CHANGED
@@ -7,7 +7,7 @@ var _typeof = require("@babel/runtime/helpers/typeof");
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  Object.defineProperty(exports, "__esModule", {
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  value: true
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  });
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- exports["default"] = void 0;
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+ exports.default = void 0;
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@@ -29,7 +29,7 @@ var _types = require("@jbrowse/core/util/types");
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  function _getRequireWildcardCache(nodeInterop) { if (typeof WeakMap !== "function") return null; var cacheBabelInterop = new WeakMap(); var cacheNodeInterop = new WeakMap(); return (_getRequireWildcardCache = function _getRequireWildcardCache(nodeInterop) { return nodeInterop ? cacheNodeInterop : cacheBabelInterop; })(nodeInterop); }
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- function _interopRequireWildcard(obj, nodeInterop) { if (!nodeInterop && obj && obj.__esModule) { return obj; } if (obj === null || _typeof(obj) !== "object" && typeof obj !== "function") { return { "default": obj }; } var cache = _getRequireWildcardCache(nodeInterop); if (cache && cache.has(obj)) { return cache.get(obj); } var newObj = {}; var hasPropertyDescriptor = Object.defineProperty && Object.getOwnPropertyDescriptor; for (var key in obj) { if (key !== "default" && Object.prototype.hasOwnProperty.call(obj, key)) { var desc = hasPropertyDescriptor ? Object.getOwnPropertyDescriptor(obj, key) : null; if (desc && (desc.get || desc.set)) { Object.defineProperty(newObj, key, desc); } else { newObj[key] = obj[key]; } } } newObj["default"] = obj; if (cache) { cache.set(obj, newObj); } return newObj; }
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+ function _interopRequireWildcard(obj, nodeInterop) { if (!nodeInterop && obj && obj.__esModule) { return obj; } if (obj === null || _typeof(obj) !== "object" && typeof obj !== "function") { return { default: obj }; } var cache = _getRequireWildcardCache(nodeInterop); if (cache && cache.has(obj)) { return cache.get(obj); } var newObj = {}; var hasPropertyDescriptor = Object.defineProperty && Object.getOwnPropertyDescriptor; for (var key in obj) { if (key !== "default" && Object.prototype.hasOwnProperty.call(obj, key)) { var desc = hasPropertyDescriptor ? Object.getOwnPropertyDescriptor(obj, key) : null; if (desc && (desc.get || desc.set)) { Object.defineProperty(newObj, key, desc); } else { newObj[key] = obj[key]; } } } newObj.default = obj; if (cache) { cache.set(obj, newObj); } return newObj; }
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@@ -49,28 +49,28 @@ var useStyles = (0, _core.makeStyles)(function () {
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- return /*#__PURE__*/_react["default"].createElement(_core.Tooltip, {
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+ return /*#__PURE__*/_react.default.createElement(_core.Tooltip, {
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  className: classes.lockedPluginTooltip,
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  title: "This plugin was installed by an administrator, you cannot remove it."
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- }, /*#__PURE__*/_react["default"].createElement(_Lock["default"], null));
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+ }, /*#__PURE__*/_react.default.createElement(_Lock.default, null));
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  }
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  function PluginDialog(_ref) {
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  var _onClose = _ref.onClose,
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  var classes = useStyles();
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- return /*#__PURE__*/_react["default"].createElement(_core.Dialog, {
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+ return /*#__PURE__*/_react.default.createElement(_core.Dialog, {
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  open: true,
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  onClose: function onClose() {
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  return _onClose();
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  }
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- }, /*#__PURE__*/_react["default"].createElement(_core.DialogTitle, null, /*#__PURE__*/_react["default"].createElement(_core.IconButton, {
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+ }, /*#__PURE__*/_react.default.createElement(_core.DialogTitle, null, /*#__PURE__*/_react.default.createElement(_core.IconButton, {
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  "aria-label": "close-dialog",
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  return _onClose();
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  }
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- }, /*#__PURE__*/_react["default"].createElement(_Close["default"], null))), /*#__PURE__*/_react["default"].createElement(_core.DialogContent, null, /*#__PURE__*/_react["default"].createElement(_core.Typography, null, "Please confirm that you want to remove ", plugin, ". Note: if any resources in this session still use this plugin, it may cause your session to crash"), /*#__PURE__*/_react["default"].createElement(_core.DialogActions, null, /*#__PURE__*/_react["default"].createElement(_core.Button, {
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+ }, /*#__PURE__*/_react.default.createElement(_Close.default, null))), /*#__PURE__*/_react.default.createElement(_core.DialogContent, null, /*#__PURE__*/_react.default.createElement(_core.Typography, null, "Please confirm that you want to remove ", plugin, ". Note: if any resources in this session still use this plugin, it may cause your session to crash"), /*#__PURE__*/_react.default.createElement(_core.DialogActions, null, /*#__PURE__*/_react.default.createElement(_core.Button, {
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  variant: "contained",
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  color: "primary",
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  onClick: function onClick() {
@@ -79,7 +79,7 @@ function PluginDialog(_ref) {
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  _onClose(plugin);
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  }, 500);
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  }
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- }, "Confirm"), /*#__PURE__*/_react["default"].createElement(_core.Button, {
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+ }, "Confirm"), /*#__PURE__*/_react.default.createElement(_core.Button, {
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  variant: "contained",
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  color: "secondary",
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  onClick: function onClick() {
@@ -94,7 +94,7 @@ function InstalledPlugin(_ref2) {
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  pluginManager = _ref2.pluginManager;
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- _useState2 = (0, _slicedToArray2["default"])(_useState, 2),
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+ _useState2 = (0, _slicedToArray2.default)(_useState, 2),
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  dialogPlugin = _useState2[0],
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@@ -107,7 +107,7 @@ function InstalledPlugin(_ref2) {
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  var rootModel = (0, _mobxStateTree.getParent)(model, 3);
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  var jbrowse = rootModel.jbrowse,
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  adminMode = rootModel.adminMode;
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- return /*#__PURE__*/_react["default"].createElement(_react["default"].Fragment, null, dialogPlugin ? /*#__PURE__*/_react["default"].createElement(PluginDialog, {
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+ return /*#__PURE__*/_react.default.createElement(_react.default.Fragment, null, dialogPlugin ? /*#__PURE__*/_react.default.createElement(PluginDialog, {
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  plugin: dialogPlugin,
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  onClose: function onClose(name) {
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@@ -122,17 +122,17 @@ function InstalledPlugin(_ref2) {
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  }
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- }) : null, /*#__PURE__*/_react["default"].createElement(_core.ListItem, {
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+ }) : null, /*#__PURE__*/_react.default.createElement(_core.ListItem, {
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  key: plugin.name
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- }, adminMode || isSessionPlugin ? /*#__PURE__*/_react["default"].createElement(_core.IconButton, {
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+ }, adminMode || isSessionPlugin ? /*#__PURE__*/_react.default.createElement(_core.IconButton, {
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  "aria-label": "removePlugin",
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  "data-testid": "removePlugin-".concat(plugin.name),
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  return setDialogPlugin(plugin.name);
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  }
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- }, /*#__PURE__*/_react["default"].createElement(_Close["default"], null)) : /*#__PURE__*/_react["default"].createElement(LockedPlugin, null), /*#__PURE__*/_react["default"].createElement(_core.Typography, null, plugin.name)));
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+ }, /*#__PURE__*/_react.default.createElement(_Close.default, null)) : /*#__PURE__*/_react.default.createElement(LockedPlugin, null), /*#__PURE__*/_react.default.createElement(_core.Typography, null, plugin.name)));
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  }
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+ exports.default = _default;
package/dist/PluginStoreWidget/components/InstalledPluginsList.js CHANGED
@@ -5,7 +5,7 @@ var _interopRequireDefault = require("@babel/runtime/helpers/interopRequireDefau
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  Object.defineProperty(exports, "__esModule", {
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  value: true
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- exports["default"] = void 0;
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+ exports.default = void 0;
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@@ -30,18 +30,18 @@ function InstalledPluginsList(_ref) {
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  var externalPlugins = plugins.filter(function (plugin) {
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  return !corePlugins.includes(plugin.name);
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  });
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- return /*#__PURE__*/_react["default"].createElement(_core.List, null, externalPlugins.length ? externalPlugins.filter(function (plugin) {
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+ return /*#__PURE__*/_react.default.createElement(_core.List, null, externalPlugins.length ? externalPlugins.filter(function (plugin) {
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  return plugin.name.toLowerCase().includes(model.filterText.toLowerCase());
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  }).map(function (plugin) {
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- return /*#__PURE__*/_react["default"].createElement(_InstalledPlugin["default"], {
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+ return /*#__PURE__*/_react.default.createElement(_InstalledPlugin.default, {
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  key: plugin.name,
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  plugin: plugin,
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  model: model,
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  pluginManager: pluginManager
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  });
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- }) : /*#__PURE__*/_react["default"].createElement(_core.Typography, null, "No plugins currently installed"));
42
+ }) : /*#__PURE__*/_react.default.createElement(_core.Typography, null, "No plugins currently installed"));
43
43
  }
44
44
 
45
45
  var _default = (0, _mobxReact.observer)(InstalledPluginsList);
46
46
 
47
- exports["default"] = _default;
47
+ exports.default = _default;
package/dist/PluginStoreWidget/components/PluginCard.js CHANGED
@@ -7,7 +7,7 @@ var _typeof = require("@babel/runtime/helpers/typeof");
7
7
  Object.defineProperty(exports, "__esModule", {
8
8
  value: true
9
9
  });
10
- exports["default"] = void 0;
10
+ exports.default = void 0;
11
11
 
12
12
  var _slicedToArray2 = _interopRequireDefault(require("@babel/runtime/helpers/slicedToArray"));
13
13
 
@@ -31,7 +31,7 @@ var _Check = _interopRequireDefault(require("@material-ui/icons/Check"));
31
31
 
32
32
  function _getRequireWildcardCache(nodeInterop) { if (typeof WeakMap !== "function") return null; var cacheBabelInterop = new WeakMap(); var cacheNodeInterop = new WeakMap(); return (_getRequireWildcardCache = function _getRequireWildcardCache(nodeInterop) { return nodeInterop ? cacheNodeInterop : cacheBabelInterop; })(nodeInterop); }
33
33
 
34
- function _interopRequireWildcard(obj, nodeInterop) { if (!nodeInterop && obj && obj.__esModule) { return obj; } if (obj === null || _typeof(obj) !== "object" && typeof obj !== "function") { return { "default": obj }; } var cache = _getRequireWildcardCache(nodeInterop); if (cache && cache.has(obj)) { return cache.get(obj); } var newObj = {}; var hasPropertyDescriptor = Object.defineProperty && Object.getOwnPropertyDescriptor; for (var key in obj) { if (key !== "default" && Object.prototype.hasOwnProperty.call(obj, key)) { var desc = hasPropertyDescriptor ? Object.getOwnPropertyDescriptor(obj, key) : null; if (desc && (desc.get || desc.set)) { Object.defineProperty(newObj, key, desc); } else { newObj[key] = obj[key]; } } } newObj["default"] = obj; if (cache) { cache.set(obj, newObj); } return newObj; }
34
+ function _interopRequireWildcard(obj, nodeInterop) { if (!nodeInterop && obj && obj.__esModule) { return obj; } if (obj === null || _typeof(obj) !== "object" && typeof obj !== "function") { return { default: obj }; } var cache = _getRequireWildcardCache(nodeInterop); if (cache && cache.has(obj)) { return cache.get(obj); } var newObj = {}; var hasPropertyDescriptor = Object.defineProperty && Object.getOwnPropertyDescriptor; for (var key in obj) { if (key !== "default" && Object.prototype.hasOwnProperty.call(obj, key)) { var desc = hasPropertyDescriptor ? Object.getOwnPropertyDescriptor(obj, key) : null; if (desc && (desc.get || desc.set)) { Object.defineProperty(newObj, key, desc); } else { newObj[key] = obj[key]; } } } newObj.default = obj; if (cache) { cache.set(obj, newObj); } return newObj; }
35
35
 
36
36
  // icons
37
37
  var useStyles = (0, _core.makeStyles)(function () {
@@ -69,38 +69,38 @@ function PluginCard(_ref) {
69
69
  }));
70
70
 
71
71
  var _useState = (0, _react.useState)(false),
72
- _useState2 = (0, _slicedToArray2["default"])(_useState, 2),
72
+ _useState2 = (0, _slicedToArray2.default)(_useState, 2),
73
73
  tempDisabled = _useState2[0],
74
74
  setTempDisabled = _useState2[1];
75
75
 
76
76
  var disableButton = isInstalled || tempDisabled;
77
77
  var rootModel = (0, _mobxStateTree.getParent)(model, 3);
78
78
  var jbrowse = rootModel.jbrowse;
79
- return /*#__PURE__*/_react["default"].createElement(_core.Card, {
79
+ return /*#__PURE__*/_react.default.createElement(_core.Card, {
80
80
  variant: "outlined",
81
81
  key: plugin.name,
82
82
  className: classes.card
83
- }, /*#__PURE__*/_react["default"].createElement(_core.CardContent, null, /*#__PURE__*/_react["default"].createElement("div", {
83
+ }, /*#__PURE__*/_react.default.createElement(_core.CardContent, null, /*#__PURE__*/_react.default.createElement("div", {
84
84
  className: classes.dataField
85
- }, /*#__PURE__*/_react["default"].createElement(_core.Typography, {
85
+ }, /*#__PURE__*/_react.default.createElement(_core.Typography, {
86
86
  variant: "h5"
87
- }, /*#__PURE__*/_react["default"].createElement(_core.Link, {
87
+ }, /*#__PURE__*/_react.default.createElement(_core.Link, {
88
88
  href: "".concat(plugin.location, "#readme"),
89
89
  target: "_blank",
90
90
  rel: "noopener"
91
- }, plugin.name))), /*#__PURE__*/_react["default"].createElement("div", {
91
+ }, plugin.name))), /*#__PURE__*/_react.default.createElement("div", {
92
92
  className: classes.dataField
93
- }, /*#__PURE__*/_react["default"].createElement(_Person["default"], {
93
+ }, /*#__PURE__*/_react.default.createElement(_Person.default, {
94
94
  style: {
95
95
  marginRight: '0.5em'
96
96
  }
97
- }), /*#__PURE__*/_react["default"].createElement(_core.Typography, null, plugin.authors.join(', '))), /*#__PURE__*/_react["default"].createElement(_core.Typography, {
97
+ }), /*#__PURE__*/_react.default.createElement(_core.Typography, null, plugin.authors.join(', '))), /*#__PURE__*/_react.default.createElement(_core.Typography, {
98
98
  className: classes.bold
99
- }, "Description:"), /*#__PURE__*/_react["default"].createElement(_core.Typography, null, plugin.description)), /*#__PURE__*/_react["default"].createElement(_core.CardActions, null, /*#__PURE__*/_react["default"].createElement(_core.Button, {
99
+ }, "Description:"), /*#__PURE__*/_react.default.createElement(_core.Typography, null, plugin.description)), /*#__PURE__*/_react.default.createElement(_core.CardActions, null, /*#__PURE__*/_react.default.createElement(_core.Button, {
100
100
  variant: "contained",
101
101
  color: "primary",
102
102
  disabled: disableButton,
103
- startIcon: isInstalled ? /*#__PURE__*/_react["default"].createElement(_Check["default"], null) : /*#__PURE__*/_react["default"].createElement(_Add["default"], null),
103
+ startIcon: isInstalled ? /*#__PURE__*/_react.default.createElement(_Check.default, null) : /*#__PURE__*/_react.default.createElement(_Add.default, null),
104
104
  onClick: function onClick() {
105
105
  if (adminMode) {
106
106
  jbrowse.addPlugin({
@@ -118,4 +118,4 @@ function PluginCard(_ref) {
118
118
 
119
119
  var _default = (0, _mobxReact.observer)(PluginCard);
120
120
 
121
- exports["default"] = _default;
121
+ exports.default = _default;
package/dist/PluginStoreWidget/components/PluginStoreWidget.js CHANGED
@@ -7,7 +7,7 @@ var _typeof = require("@babel/runtime/helpers/typeof");
7
7
  Object.defineProperty(exports, "__esModule", {
8
8
  value: true
9
9
  });
10
- exports["default"] = void 0;
10
+ exports.default = void 0;
11
11
 
12
12
  var _regenerator = _interopRequireDefault(require("@babel/runtime/regenerator"));
13
13
 
@@ -39,7 +39,7 @@ var _CustomPluginForm = _interopRequireDefault(require("./CustomPluginForm"));
39
39
 
40
40
  function _getRequireWildcardCache(nodeInterop) { if (typeof WeakMap !== "function") return null; var cacheBabelInterop = new WeakMap(); var cacheNodeInterop = new WeakMap(); return (_getRequireWildcardCache = function _getRequireWildcardCache(nodeInterop) { return nodeInterop ? cacheNodeInterop : cacheBabelInterop; })(nodeInterop); }
41
41
 
42
- function _interopRequireWildcard(obj, nodeInterop) { if (!nodeInterop && obj && obj.__esModule) { return obj; } if (obj === null || _typeof(obj) !== "object" && typeof obj !== "function") { return { "default": obj }; } var cache = _getRequireWildcardCache(nodeInterop); if (cache && cache.has(obj)) { return cache.get(obj); } var newObj = {}; var hasPropertyDescriptor = Object.defineProperty && Object.getOwnPropertyDescriptor; for (var key in obj) { if (key !== "default" && Object.prototype.hasOwnProperty.call(obj, key)) { var desc = hasPropertyDescriptor ? Object.getOwnPropertyDescriptor(obj, key) : null; if (desc && (desc.get || desc.set)) { Object.defineProperty(newObj, key, desc); } else { newObj[key] = obj[key]; } } } newObj["default"] = obj; if (cache) { cache.set(obj, newObj); } return newObj; }
42
+ function _interopRequireWildcard(obj, nodeInterop) { if (!nodeInterop && obj && obj.__esModule) { return obj; } if (obj === null || _typeof(obj) !== "object" && typeof obj !== "function") { return { default: obj }; } var cache = _getRequireWildcardCache(nodeInterop); if (cache && cache.has(obj)) { return cache.get(obj); } var newObj = {}; var hasPropertyDescriptor = Object.defineProperty && Object.getOwnPropertyDescriptor; for (var key in obj) { if (key !== "default" && Object.prototype.hasOwnProperty.call(obj, key)) { var desc = hasPropertyDescriptor ? Object.getOwnPropertyDescriptor(obj, key) : null; if (desc && (desc.get || desc.set)) { Object.defineProperty(newObj, key, desc); } else { newObj[key] = obj[key]; } } } newObj.default = obj; if (cache) { cache.set(obj, newObj); } return newObj; }
43
43
 
44
44
  // icons
45
45
  // locals
@@ -73,17 +73,17 @@ function PluginStoreWidget(_ref) {
73
73
  var classes = useStyles();
74
74
 
75
75
  var _useState = (0, _react.useState)(),
76
- _useState2 = (0, _slicedToArray2["default"])(_useState, 2),
76
+ _useState2 = (0, _slicedToArray2.default)(_useState, 2),
77
77
  pluginArray = _useState2[0],
78
78
  setPluginArray = _useState2[1];
79
79
 
80
80
  var _useState3 = (0, _react.useState)(),
81
- _useState4 = (0, _slicedToArray2["default"])(_useState3, 2),
81
+ _useState4 = (0, _slicedToArray2.default)(_useState3, 2),
82
82
  error = _useState4[0],
83
83
  setError = _useState4[1];
84
84
 
85
85
  var _useState5 = (0, _react.useState)(false),
86
- _useState6 = (0, _slicedToArray2["default"])(_useState5, 2),
86
+ _useState6 = (0, _slicedToArray2.default)(_useState5, 2),
87
87
  customPluginFormOpen = _useState6[0],
88
88
  setCustomPluginFormOpen = _useState6[1];
89
89
 
@@ -96,9 +96,9 @@ function PluginStoreWidget(_ref) {
96
96
  (0, _react.useEffect)(function () {
97
97
  var controller = new AbortController();
98
98
  var signal = controller.signal;
99
- (0, _asyncToGenerator2["default"])( /*#__PURE__*/_regenerator["default"].mark(function _callee() {
99
+ (0, _asyncToGenerator2.default)( /*#__PURE__*/_regenerator.default.mark(function _callee() {
100
100
  var response, err, array;
101
- return _regenerator["default"].wrap(function _callee$(_context) {
101
+ return _regenerator.default.wrap(function _callee$(_context) {
102
102
  while (1) {
103
103
  switch (_context.prev = _context.next) {
104
104
  case 0:
@@ -154,29 +154,29 @@ function PluginStoreWidget(_ref) {
154
154
  controller.abort();
155
155
  };
156
156
  }, []);
157
- return /*#__PURE__*/_react["default"].createElement("div", {
157
+ return /*#__PURE__*/_react.default.createElement("div", {
158
158
  className: classes.root
159
- }, adminMode && /*#__PURE__*/_react["default"].createElement(_react["default"].Fragment, null, !_util.isElectron && /*#__PURE__*/_react["default"].createElement("div", {
159
+ }, adminMode && /*#__PURE__*/_react.default.createElement(_react.default.Fragment, null, !_util.isElectron && /*#__PURE__*/_react.default.createElement("div", {
160
160
  className: classes.adminBadge
161
- }, /*#__PURE__*/_react["default"].createElement(_InfoOutlined["default"], {
161
+ }, /*#__PURE__*/_react.default.createElement(_InfoOutlined.default, {
162
162
  style: {
163
163
  marginRight: '0.3em'
164
164
  }
165
- }), /*#__PURE__*/_react["default"].createElement(_core.Typography, null, "You are using the ", /*#__PURE__*/_react["default"].createElement("code", null, "admin-server"), ". Any changes you make will be saved to your configuration file. You also have the ability to add custom plugins that are not in the store.")), /*#__PURE__*/_react["default"].createElement("div", {
165
+ }), /*#__PURE__*/_react.default.createElement(_core.Typography, null, "You are using the ", /*#__PURE__*/_react.default.createElement("code", null, "admin-server"), ". Any changes you make will be saved to your configuration file. You also have the ability to add custom plugins that are not in the store.")), /*#__PURE__*/_react.default.createElement("div", {
166
166
  className: classes.customPluginButton
167
- }, /*#__PURE__*/_react["default"].createElement(_core.Button, {
167
+ }, /*#__PURE__*/_react.default.createElement(_core.Button, {
168
168
  variant: "contained",
169
169
  color: "primary",
170
170
  onClick: function onClick() {
171
171
  return setCustomPluginFormOpen(true);
172
172
  }
173
- }, "Add custom plugin")), /*#__PURE__*/_react["default"].createElement(_CustomPluginForm["default"], {
173
+ }, "Add custom plugin")), /*#__PURE__*/_react.default.createElement(_CustomPluginForm.default, {
174
174
  open: customPluginFormOpen,
175
175
  onClose: function onClose() {
176
176
  return setCustomPluginFormOpen(false);
177
177
  },
178
178
  model: model
179
- })), /*#__PURE__*/_react["default"].createElement(_core.TextField, {
179
+ })), /*#__PURE__*/_react.default.createElement(_core.TextField, {
180
180
  label: "Filter plugins",
181
181
  value: model.filterText,
182
182
  onChange: function onChange(event) {
@@ -184,39 +184,39 @@ function PluginStoreWidget(_ref) {
184
184
  },
185
185
  fullWidth: true,
186
186
  InputProps: {
187
- endAdornment: /*#__PURE__*/_react["default"].createElement(_core.InputAdornment, {
187
+ endAdornment: /*#__PURE__*/_react.default.createElement(_core.InputAdornment, {
188
188
  position: "end"
189
- }, /*#__PURE__*/_react["default"].createElement(_core.IconButton, {
189
+ }, /*#__PURE__*/_react.default.createElement(_core.IconButton, {
190
190
  color: "secondary",
191
191
  onClick: function onClick() {
192
192
  return model.clearFilterText();
193
193
  }
194
- }, /*#__PURE__*/_react["default"].createElement(_Clear["default"], null)))
194
+ }, /*#__PURE__*/_react.default.createElement(_Clear.default, null)))
195
195
  }
196
- }), /*#__PURE__*/_react["default"].createElement(_core.Accordion, {
196
+ }), /*#__PURE__*/_react.default.createElement(_core.Accordion, {
197
197
  defaultExpanded: true
198
- }, /*#__PURE__*/_react["default"].createElement(_core.AccordionSummary, {
199
- expandIcon: /*#__PURE__*/_react["default"].createElement(_ExpandMore["default"], {
198
+ }, /*#__PURE__*/_react.default.createElement(_core.AccordionSummary, {
199
+ expandIcon: /*#__PURE__*/_react.default.createElement(_ExpandMore.default, {
200
200
  className: classes.expandIcon
201
201
  })
202
- }, /*#__PURE__*/_react["default"].createElement(_core.Typography, {
202
+ }, /*#__PURE__*/_react.default.createElement(_core.Typography, {
203
203
  variant: "h5"
204
- }, "Installed plugins")), /*#__PURE__*/_react["default"].createElement("div", {
204
+ }, "Installed plugins")), /*#__PURE__*/_react.default.createElement("div", {
205
205
  style: {
206
206
  margin: '1em'
207
207
  }
208
- }, /*#__PURE__*/_react["default"].createElement(_InstalledPluginsList["default"], {
208
+ }, /*#__PURE__*/_react.default.createElement(_InstalledPluginsList.default, {
209
209
  pluginManager: pluginManager,
210
210
  model: model
211
- }))), /*#__PURE__*/_react["default"].createElement(_core.Accordion, {
211
+ }))), /*#__PURE__*/_react.default.createElement(_core.Accordion, {
212
212
  defaultExpanded: true
213
- }, /*#__PURE__*/_react["default"].createElement(_core.AccordionSummary, {
214
- expandIcon: /*#__PURE__*/_react["default"].createElement(_ExpandMore["default"], {
213
+ }, /*#__PURE__*/_react.default.createElement(_core.AccordionSummary, {
214
+ expandIcon: /*#__PURE__*/_react.default.createElement(_ExpandMore.default, {
215
215
  className: classes.expandIcon
216
216
  })
217
- }, /*#__PURE__*/_react["default"].createElement(_core.Typography, {
217
+ }, /*#__PURE__*/_react.default.createElement(_core.Typography, {
218
218
  variant: "h5"
219
- }, "Available plugins")), error ? /*#__PURE__*/_react["default"].createElement(_core.Typography, {
219
+ }, "Available plugins")), error ? /*#__PURE__*/_react.default.createElement(_core.Typography, {
220
220
  color: "error"
221
221
  }, "".concat(error)) : pluginArray ? pluginArray.filter(function (plugin) {
222
222
  // If pugin only has cjsUrl, don't display outside desktop
@@ -226,15 +226,15 @@ function PluginStoreWidget(_ref) {
226
226
 
227
227
  return plugin.name.toLowerCase().includes(model.filterText.toLowerCase());
228
228
  }).map(function (plugin) {
229
- return /*#__PURE__*/_react["default"].createElement(_PluginCard["default"], {
229
+ return /*#__PURE__*/_react.default.createElement(_PluginCard.default, {
230
230
  key: plugin.name,
231
231
  plugin: plugin,
232
232
  model: model,
233
233
  adminMode: !!adminMode
234
234
  });
235
- }) : /*#__PURE__*/_react["default"].createElement(_core.Typography, null, "Loading...")));
235
+ }) : /*#__PURE__*/_react.default.createElement(_core.Typography, null, "Loading...")));
236
236
  }
237
237
 
238
238
  var _default = (0, _mobxReact.observer)(PluginStoreWidget);
239
239
 
240
- exports["default"] = _default;
240
+ exports.default = _default;
package/dist/PluginStoreWidget/components/PluginStoreWidget.test.js CHANGED
@@ -20,7 +20,7 @@ var _PluginStoreWidget = _interopRequireDefault(require("./PluginStoreWidget"));
20
20
 
21
21
  function ownKeys(object, enumerableOnly) { var keys = Object.keys(object); if (Object.getOwnPropertySymbols) { var symbols = Object.getOwnPropertySymbols(object); enumerableOnly && (symbols = symbols.filter(function (sym) { return Object.getOwnPropertyDescriptor(object, sym).enumerable; })), keys.push.apply(keys, symbols); } return keys; }
22
22
 
23
- function _objectSpread(target) { for (var i = 1; i < arguments.length; i++) { var source = null != arguments[i] ? arguments[i] : {}; i % 2 ? ownKeys(Object(source), !0).forEach(function (key) { (0, _defineProperty2["default"])(target, key, source[key]); }) : Object.getOwnPropertyDescriptors ? Object.defineProperties(target, Object.getOwnPropertyDescriptors(source)) : ownKeys(Object(source)).forEach(function (key) { Object.defineProperty(target, key, Object.getOwnPropertyDescriptor(source, key)); }); } return target; }
23
+ function _objectSpread(target) { for (var i = 1; i < arguments.length; i++) { var source = null != arguments[i] ? arguments[i] : {}; i % 2 ? ownKeys(Object(source), !0).forEach(function (key) { (0, _defineProperty2.default)(target, key, source[key]); }) : Object.getOwnPropertyDescriptors ? Object.defineProperties(target, Object.getOwnPropertyDescriptors(source)) : ownKeys(Object(source)).forEach(function (key) { Object.defineProperty(target, key, Object.getOwnPropertyDescriptor(source, key)); }); } return target; }
24
24
 
25
25
  jest.mock('@jbrowse/web/src/makeWorkerInstance', function () {
26
26
  return function () {};
@@ -52,14 +52,14 @@ describe('<PluginStoreWidget />', function () {
52
52
  fetch.mockResponse(JSON.stringify(plugins));
53
53
  });
54
54
  afterEach(_react2.cleanup);
55
- it('renders with the available plugins', /*#__PURE__*/(0, _asyncToGenerator2["default"])( /*#__PURE__*/_regenerator["default"].mark(function _callee() {
55
+ it('renders with the available plugins', /*#__PURE__*/(0, _asyncToGenerator2.default)( /*#__PURE__*/_regenerator.default.mark(function _callee() {
56
56
  var _render, container, findByText;
57
57
 
58
- return _regenerator["default"].wrap(function _callee$(_context) {
58
+ return _regenerator.default.wrap(function _callee$(_context) {
59
59
  while (1) {
60
60
  switch (_context.prev = _context.next) {
61
61
  case 0:
62
- _render = (0, _react2.render)( /*#__PURE__*/_react["default"].createElement(_PluginStoreWidget["default"], {
62
+ _render = (0, _react2.render)( /*#__PURE__*/_react.default.createElement(_PluginStoreWidget.default, {
63
63
  model: model
64
64
  })), container = _render.container, findByText = _render.findByText;
65
65
  _context.next = 3;
@@ -75,14 +75,14 @@ describe('<PluginStoreWidget />', function () {
75
75
  }
76
76
  }, _callee);
77
77
  })));
78
- it('Installs a session plugin', /*#__PURE__*/(0, _asyncToGenerator2["default"])( /*#__PURE__*/_regenerator["default"].mark(function _callee2() {
78
+ it('Installs a session plugin', /*#__PURE__*/(0, _asyncToGenerator2.default)( /*#__PURE__*/_regenerator.default.mark(function _callee2() {
79
79
  var _render2, findByText;
80
80
 
81
- return _regenerator["default"].wrap(function _callee2$(_context2) {
81
+ return _regenerator.default.wrap(function _callee2$(_context2) {
82
82
  while (1) {
83
83
  switch (_context2.prev = _context2.next) {
84
84
  case 0:
85
- _render2 = (0, _react2.render)( /*#__PURE__*/_react["default"].createElement(_PluginStoreWidget["default"], {
85
+ _render2 = (0, _react2.render)( /*#__PURE__*/_react.default.createElement(_PluginStoreWidget.default, {
86
86
  model: model
87
87
  })), findByText = _render2.findByText;
88
88
  _context2.next = 3;
@@ -113,16 +113,16 @@ describe('<PluginStoreWidget />', function () {
113
113
  }
114
114
  }, _callee2);
115
115
  })));
116
- it('plugin store admin - adds a custom plugin correctly', /*#__PURE__*/(0, _asyncToGenerator2["default"])( /*#__PURE__*/_regenerator["default"].mark(function _callee3() {
116
+ it('plugin store admin - adds a custom plugin correctly', /*#__PURE__*/(0, _asyncToGenerator2.default)( /*#__PURE__*/_regenerator.default.mark(function _callee3() {
117
117
  var _render3, findByText, getByText, getByLabelText;
118
118
 
119
- return _regenerator["default"].wrap(function _callee3$(_context3) {
119
+ return _regenerator.default.wrap(function _callee3$(_context3) {
120
120
  while (1) {
121
121
  switch (_context3.prev = _context3.next) {
122
122
  case 0:
123
123
  session = (0, _rootModel.createTestSession)({}, true);
124
124
  model = session.addWidget('PluginStoreWidget', 'pluginStoreWidget');
125
- _render3 = (0, _react2.render)( /*#__PURE__*/_react["default"].createElement(_PluginStoreWidget["default"], {
125
+ _render3 = (0, _react2.render)( /*#__PURE__*/_react.default.createElement(_PluginStoreWidget.default, {
126
126
  model: model
127
127
  })), findByText = _render3.findByText, getByText = _render3.getByText, getByLabelText = _render3.getByLabelText;
128
128
  _context3.next = 5;
@@ -163,10 +163,10 @@ describe('<PluginStoreWidget />', function () {
163
163
  }
164
164
  }, _callee3);
165
165
  })));
166
- it('plugin store admin - removes a custom plugin correctly', /*#__PURE__*/(0, _asyncToGenerator2["default"])( /*#__PURE__*/_regenerator["default"].mark(function _callee4() {
166
+ it('plugin store admin - removes a custom plugin correctly', /*#__PURE__*/(0, _asyncToGenerator2.default)( /*#__PURE__*/_regenerator.default.mark(function _callee4() {
167
167
  var rootModel, jbrowse, _render4, findByText, getByText, getByTestId;
168
168
 
169
- return _regenerator["default"].wrap(function _callee4$(_context4) {
169
+ return _regenerator.default.wrap(function _callee4$(_context4) {
170
170
  while (1) {
171
171
  switch (_context4.prev = _context4.next) {
172
172
  case 0:
@@ -175,7 +175,7 @@ describe('<PluginStoreWidget />', function () {
175
175
  rootModel = (0, _mobxStateTree.getParent)(session);
176
176
  jbrowse = rootModel.jbrowse;
177
177
  jbrowse.addPlugin(plugins.plugins[0]);
178
- _render4 = (0, _react2.render)( /*#__PURE__*/_react["default"].createElement(_PluginStoreWidget["default"], {
178
+ _render4 = (0, _react2.render)( /*#__PURE__*/_react.default.createElement(_PluginStoreWidget.default, {
179
179
  model: model
180
180
  })), findByText = _render4.findByText, getByText = _render4.getByText, getByTestId = _render4.getByTestId;
181
181
  _context4.next = 8;
package/dist/PluginStoreWidget/index.js CHANGED
@@ -8,14 +8,14 @@ Object.defineProperty(exports, "__esModule", {
8
8
  Object.defineProperty(exports, "ReactComponent", {
9
9
  enumerable: true,
10
10
  get: function get() {
11
- return _PluginStoreWidget["default"];
11
+ return _PluginStoreWidget.default;
12
12
  }
13
13
  });
14
14
  exports.configSchema = void 0;
15
15
  Object.defineProperty(exports, "stateModelFactory", {
16
16
  enumerable: true,
17
17
  get: function get() {
18
- return _model["default"];
18
+ return _model.default;
19
19
  }
20
20
  });
21
21