@jbrowse/plugin-data-management 1.7.1 → 1.7.5

package/dist/AddConnectionWidget/components/AddConnectionWidget.js

@@ -7,7 +7,7 @@ var _typeof = require("@babel/runtime/helpers/typeof");
 Object.defineProperty(exports, "__esModule", {
   value: true
 });
-exports["default"] = void 0;
+exports.default = void 0;
 
 var _slicedToArray2 = _interopRequireDefault(require("@babel/runtime/helpers/slicedToArray"));
 
@@ -39,7 +39,7 @@ var _ConnectionTypeSelect = _interopRequireDefault(require("./ConnectionTypeSele
 
 function _getRequireWildcardCache(nodeInterop) { if (typeof WeakMap !== "function") return null; var cacheBabelInterop = new WeakMap(); var cacheNodeInterop = new WeakMap(); return (_getRequireWildcardCache = function _getRequireWildcardCache(nodeInterop) { return nodeInterop ? cacheNodeInterop : cacheBabelInterop; })(nodeInterop); }
 
-function _interopRequireWildcard(obj, nodeInterop) { if (!nodeInterop && obj && obj.__esModule) { return obj; } if (obj === null || _typeof(obj) !== "object" && typeof obj !== "function") { return { "default": obj }; } var cache = _getRequireWildcardCache(nodeInterop); if (cache && cache.has(obj)) { return cache.get(obj); } var newObj = {}; var hasPropertyDescriptor = Object.defineProperty && Object.getOwnPropertyDescriptor; for (var key in obj) { if (key !== "default" && Object.prototype.hasOwnProperty.call(obj, key)) { var desc = hasPropertyDescriptor ? Object.getOwnPropertyDescriptor(obj, key) : null; if (desc && (desc.get || desc.set)) { Object.defineProperty(newObj, key, desc); } else { newObj[key] = obj[key]; } } } newObj["default"] = obj; if (cache) { cache.set(obj, newObj); } return newObj; }
+function _interopRequireWildcard(obj, nodeInterop) { if (!nodeInterop && obj && obj.__esModule) { return obj; } if (obj === null || _typeof(obj) !== "object" && typeof obj !== "function") { return { default: obj }; } var cache = _getRequireWildcardCache(nodeInterop); if (cache && cache.has(obj)) { return cache.get(obj); } var newObj = {}; var hasPropertyDescriptor = Object.defineProperty && Object.getOwnPropertyDescriptor; for (var key in obj) { if (key !== "default" && Object.prototype.hasOwnProperty.call(obj, key)) { var desc = hasPropertyDescriptor ? Object.getOwnPropertyDescriptor(obj, key) : null; if (desc && (desc.get || desc.set)) { Object.defineProperty(newObj, key, desc); } else { newObj[key] = obj[key]; } } } newObj.default = obj; if (cache) { cache.set(obj, newObj); } return newObj; }
 
 var useStyles = (0, _styles.makeStyles)(function (theme) {
   return {
@@ -47,7 +47,7 @@ var useStyles = (0, _styles.makeStyles)(function (theme) {
       marginTop: theme.spacing(1)
     },
     stepper: {
-      backgroundColor: theme.palette.background["default"]
+      backgroundColor: theme.palette.background.default
     },
     button: {
       marginTop: theme.spacing(1),
@@ -64,22 +64,22 @@ function AddConnectionWidget(_ref) {
   var model = _ref.model;
 
   var _useState = (0, _react.useState)({}),
-      _useState2 = (0, _slicedToArray2["default"])(_useState, 2),
+      _useState2 = (0, _slicedToArray2.default)(_useState, 2),
       connectionType = _useState2[0],
       setConnectionType = _useState2[1];
 
   var _useState3 = (0, _react.useState)({}),
-      _useState4 = (0, _slicedToArray2["default"])(_useState3, 2),
+      _useState4 = (0, _slicedToArray2.default)(_useState3, 2),
       configModel = _useState4[0],
       setConfigModel = _useState4[1];
 
   var _useState5 = (0, _react.useState)(true),
-      _useState6 = (0, _slicedToArray2["default"])(_useState5, 2),
+      _useState6 = (0, _slicedToArray2.default)(_useState5, 2),
       configModelReady = _useState6[0],
       setConfigModelReady = _useState6[1];
 
   var _useState7 = (0, _react.useState)(0),
-      _useState8 = (0, _slicedToArray2["default"])(_useState7, 2),
+      _useState8 = (0, _slicedToArray2.default)(_useState7, 2),
       activeStep = _useState8[0],
       setActiveStep = _useState8[1];
 
@@ -99,21 +99,21 @@ function AddConnectionWidget(_ref) {
   function stepContent() {
     switch (activeStep) {
       case 0:
-        return /*#__PURE__*/_react["default"].createElement(_ConnectionTypeSelect["default"], {
+        return /*#__PURE__*/_react.default.createElement(_ConnectionTypeSelect.default, {
           connectionTypeChoices: pluginManager.getElementTypesInGroup('connection'),
           connectionType: connectionType,
           setConnectionType: handleSetConnectionType
         });
 
       case 1:
-        return /*#__PURE__*/_react["default"].createElement(_ConfigureConnection["default"], {
+        return /*#__PURE__*/_react.default.createElement(_ConfigureConnection.default, {
           connectionType: connectionType,
           model: configModel,
           setModelReady: setConfigModelReady
         });
 
       default:
-        return /*#__PURE__*/_react["default"].createElement(_Typography["default"], null, "Unknown step");
+        return /*#__PURE__*/_react.default.createElement(_Typography.default, null, "Unknown step");
     }
   }
 
@@ -143,22 +143,22 @@ function AddConnectionWidget(_ref) {
     return false;
   }
 
-  return /*#__PURE__*/_react["default"].createElement("div", {
+  return /*#__PURE__*/_react.default.createElement("div", {
     className: classes.root
-  }, /*#__PURE__*/_react["default"].createElement(_Stepper["default"], {
+  }, /*#__PURE__*/_react.default.createElement(_Stepper.default, {
     className: classes.stepper,
     activeStep: activeStep,
     orientation: "vertical"
   }, steps.map(function (label) {
-    return /*#__PURE__*/_react["default"].createElement(_Step["default"], {
+    return /*#__PURE__*/_react.default.createElement(_Step.default, {
       key: label
-    }, /*#__PURE__*/_react["default"].createElement(_StepLabel["default"], null, label), /*#__PURE__*/_react["default"].createElement(_StepContent["default"], null, stepContent(), /*#__PURE__*/_react["default"].createElement("div", {
+    }, /*#__PURE__*/_react.default.createElement(_StepLabel.default, null, label), /*#__PURE__*/_react.default.createElement(_StepContent.default, null, stepContent(), /*#__PURE__*/_react.default.createElement("div", {
       className: classes.actionsContainer
-    }, /*#__PURE__*/_react["default"].createElement(_Button["default"], {
+    }, /*#__PURE__*/_react.default.createElement(_Button.default, {
       disabled: activeStep === 0,
       onClick: handleBack,
       className: classes.button
-    }, "Back"), /*#__PURE__*/_react["default"].createElement(_Button["default"], {
+    }, "Back"), /*#__PURE__*/_react.default.createElement(_Button.default, {
       disabled: !checkNextEnabled(),
       variant: "contained",
       color: "primary",
@@ -175,4 +175,4 @@ AddConnectionWidget.propTypes = {
 
 var _default = (0, _mobxReact.observer)(AddConnectionWidget);
 
-exports["default"] = _default;
+exports.default = _default;

package/dist/AddConnectionWidget/components/AddConnectionWidget.test.js

@@ -48,17 +48,17 @@ describe('<AddConnectionWidget />', function () {
   });
   afterEach(_react.cleanup);
   it('renders', function () {
-    var _render = (0, _react.render)( /*#__PURE__*/_react2["default"].createElement(_AddConnectionWidget["default"], {
+    var _render = (0, _react.render)( /*#__PURE__*/_react2.default.createElement(_AddConnectionWidget.default, {
       model: model
     })),
         container = _render.container;
 
     expect(container.firstChild).toMatchSnapshot();
   });
-  it('can handle a custom UCSC trackHub URL', /*#__PURE__*/(0, _asyncToGenerator2["default"])( /*#__PURE__*/_regenerator["default"].mark(function _callee() {
+  it('can handle a custom UCSC trackHub URL', /*#__PURE__*/(0, _asyncToGenerator2.default)( /*#__PURE__*/_regenerator.default.mark(function _callee() {
     var mockFetch, _render2, findByTestId, getAllByRole, findAllByText, findByDisplayValue, ucscTrackHubSelection;
 
-    return _regenerator["default"].wrap(function _callee$(_context) {
+    return _regenerator.default.wrap(function _callee$(_context) {
       while (1) {
         switch (_context.prev = _context.next) {
           case 0:
@@ -80,7 +80,7 @@ describe('<AddConnectionWidget />', function () {
             };
 
             jest.spyOn(global, 'fetch').mockImplementation(mockFetch);
-            _render2 = (0, _react.render)( /*#__PURE__*/_react2["default"].createElement(_AddConnectionWidget["default"], {
+            _render2 = (0, _react.render)( /*#__PURE__*/_react2.default.createElement(_AddConnectionWidget.default, {
               model: model
             })), findByTestId = _render2.findByTestId, getAllByRole = _render2.getAllByRole, findAllByText = _render2.findAllByText, findByDisplayValue = _render2.findByDisplayValue;
             expect(session.connections.length).toBe(0);
@@ -150,10 +150,10 @@ describe('<AddConnectionWidget />', function () {
       }
     }, _callee);
   })));
-  it('can handle a custom JBrowse 1 data directory URL', /*#__PURE__*/(0, _asyncToGenerator2["default"])( /*#__PURE__*/_regenerator["default"].mark(function _callee2() {
+  it('can handle a custom JBrowse 1 data directory URL', /*#__PURE__*/(0, _asyncToGenerator2.default)( /*#__PURE__*/_regenerator.default.mark(function _callee2() {
     var mockFetch, _render3, findByTestId, getAllByRole, findByPlaceholderText, findByText, findByDisplayValue;
 
-    return _regenerator["default"].wrap(function _callee2$(_context2) {
+    return _regenerator.default.wrap(function _callee2$(_context2) {
       while (1) {
         switch (_context2.prev = _context2.next) {
           case 0:
@@ -173,7 +173,7 @@ describe('<AddConnectionWidget />', function () {
             };
 
             jest.spyOn(global, 'fetch').mockImplementation(mockFetch);
-            _render3 = (0, _react.render)( /*#__PURE__*/_react2["default"].createElement(_AddConnectionWidget["default"], {
+            _render3 = (0, _react.render)( /*#__PURE__*/_react2.default.createElement(_AddConnectionWidget.default, {
               model: model
             })), findByTestId = _render3.findByTestId, getAllByRole = _render3.getAllByRole, findByPlaceholderText = _render3.findByPlaceholderText, findByText = _render3.findByText, findByDisplayValue = _render3.findByDisplayValue;
             expect(session.connections.length).toBe(0);

package/dist/AddConnectionWidget/components/ConfigureConnection.js

@@ -5,7 +5,7 @@ var _typeof = require("@babel/runtime/helpers/typeof");
 Object.defineProperty(exports, "__esModule", {
   value: true
 });
-exports["default"] = void 0;
+exports.default = void 0;
 
 var _react = _interopRequireWildcard(require("react"));
 
@@ -15,16 +15,16 @@ var _mobxReact = require("mobx-react");
 
 function _getRequireWildcardCache(nodeInterop) { if (typeof WeakMap !== "function") return null; var cacheBabelInterop = new WeakMap(); var cacheNodeInterop = new WeakMap(); return (_getRequireWildcardCache = function _getRequireWildcardCache(nodeInterop) { return nodeInterop ? cacheNodeInterop : cacheBabelInterop; })(nodeInterop); }
 
-function _interopRequireWildcard(obj, nodeInterop) { if (!nodeInterop && obj && obj.__esModule) { return obj; } if (obj === null || _typeof(obj) !== "object" && typeof obj !== "function") { return { "default": obj }; } var cache = _getRequireWildcardCache(nodeInterop); if (cache && cache.has(obj)) { return cache.get(obj); } var newObj = {}; var hasPropertyDescriptor = Object.defineProperty && Object.getOwnPropertyDescriptor; for (var key in obj) { if (key !== "default" && Object.prototype.hasOwnProperty.call(obj, key)) { var desc = hasPropertyDescriptor ? Object.getOwnPropertyDescriptor(obj, key) : null; if (desc && (desc.get || desc.set)) { Object.defineProperty(newObj, key, desc); } else { newObj[key] = obj[key]; } } } newObj["default"] = obj; if (cache) { cache.set(obj, newObj); } return newObj; }
+function _interopRequireWildcard(obj, nodeInterop) { if (!nodeInterop && obj && obj.__esModule) { return obj; } if (obj === null || _typeof(obj) !== "object" && typeof obj !== "function") { return { default: obj }; } var cache = _getRequireWildcardCache(nodeInterop); if (cache && cache.has(obj)) { return cache.get(obj); } var newObj = {}; var hasPropertyDescriptor = Object.defineProperty && Object.getOwnPropertyDescriptor; for (var key in obj) { if (key !== "default" && Object.prototype.hasOwnProperty.call(obj, key)) { var desc = hasPropertyDescriptor ? Object.getOwnPropertyDescriptor(obj, key) : null; if (desc && (desc.get || desc.set)) { Object.defineProperty(newObj, key, desc); } else { newObj[key] = obj[key]; } } } newObj.default = obj; if (cache) { cache.set(obj, newObj); } return newObj; }
 
 var ConfigureConnection = (0, _mobxReact.observer)(function (props) {
   var connectionType = props.connectionType,
       model = props.model,
       setModelReady = props.setModelReady;
   var ConfigEditorComponent = connectionType.configEditorComponent || _pluginConfig.ConfigurationEditor;
-  return /*#__PURE__*/_react["default"].createElement(_react.Suspense, {
-    fallback: /*#__PURE__*/_react["default"].createElement("div", null, "Loading...")
-  }, /*#__PURE__*/_react["default"].createElement(ConfigEditorComponent, {
+  return /*#__PURE__*/_react.default.createElement(_react.Suspense, {
+    fallback: /*#__PURE__*/_react.default.createElement("div", null, "Loading...")
+  }, /*#__PURE__*/_react.default.createElement(ConfigEditorComponent, {
     model: {
       target: model
     },
@@ -32,4 +32,4 @@ var ConfigureConnection = (0, _mobxReact.observer)(function (props) {
   }));
 });
 var _default = ConfigureConnection;
-exports["default"] = _default;
+exports.default = _default;

package/dist/AddConnectionWidget/components/ConnectionTypeSelect.js

@@ -7,7 +7,7 @@ var _typeof = require("@babel/runtime/helpers/typeof");
 Object.defineProperty(exports, "__esModule", {
   value: true
 });
-exports["default"] = void 0;
+exports.default = void 0;
 
 var _IconButton = _interopRequireDefault(require("@material-ui/core/IconButton"));
 
@@ -21,7 +21,7 @@ var _OpenInNew = _interopRequireDefault(require("@material-ui/icons/OpenInNew"))
 
 function _getRequireWildcardCache(nodeInterop) { if (typeof WeakMap !== "function") return null; var cacheBabelInterop = new WeakMap(); var cacheNodeInterop = new WeakMap(); return (_getRequireWildcardCache = function _getRequireWildcardCache(nodeInterop) { return nodeInterop ? cacheNodeInterop : cacheBabelInterop; })(nodeInterop); }
 
-function _interopRequireWildcard(obj, nodeInterop) { if (!nodeInterop && obj && obj.__esModule) { return obj; } if (obj === null || _typeof(obj) !== "object" && typeof obj !== "function") { return { "default": obj }; } var cache = _getRequireWildcardCache(nodeInterop); if (cache && cache.has(obj)) { return cache.get(obj); } var newObj = {}; var hasPropertyDescriptor = Object.defineProperty && Object.getOwnPropertyDescriptor; for (var key in obj) { if (key !== "default" && Object.prototype.hasOwnProperty.call(obj, key)) { var desc = hasPropertyDescriptor ? Object.getOwnPropertyDescriptor(obj, key) : null; if (desc && (desc.get || desc.set)) { Object.defineProperty(newObj, key, desc); } else { newObj[key] = obj[key]; } } } newObj["default"] = obj; if (cache) { cache.set(obj, newObj); } return newObj; }
+function _interopRequireWildcard(obj, nodeInterop) { if (!nodeInterop && obj && obj.__esModule) { return obj; } if (obj === null || _typeof(obj) !== "object" && typeof obj !== "function") { return { default: obj }; } var cache = _getRequireWildcardCache(nodeInterop); if (cache && cache.has(obj)) { return cache.get(obj); } var newObj = {}; var hasPropertyDescriptor = Object.defineProperty && Object.getOwnPropertyDescriptor; for (var key in obj) { if (key !== "default" && Object.prototype.hasOwnProperty.call(obj, key)) { var desc = hasPropertyDescriptor ? Object.getOwnPropertyDescriptor(obj, key) : null; if (desc && (desc.get || desc.set)) { Object.defineProperty(newObj, key, desc); } else { newObj[key] = obj[key]; } } } newObj.default = obj; if (cache) { cache.set(obj, newObj); } return newObj; }
 
 function ConnectionTypeSelect(props) {
   var connectionTypeChoices = props.connectionTypeChoices,
@@ -43,23 +43,23 @@ function ConnectionTypeSelect(props) {
     return null;
   }
 
-  return /*#__PURE__*/_react["default"].createElement("form", {
+  return /*#__PURE__*/_react.default.createElement("form", {
     autoComplete: "off"
-  }, /*#__PURE__*/_react["default"].createElement(_TextField["default"], {
+  }, /*#__PURE__*/_react.default.createElement(_TextField.default, {
     value: connectionType.name,
     label: "connectionType",
-    helperText: connectionType.description ? /*#__PURE__*/_react["default"].createElement(_react["default"].Fragment, null, connectionType.description, connectionType.url ? /*#__PURE__*/_react["default"].createElement(_IconButton["default"], {
+    helperText: connectionType.description ? /*#__PURE__*/_react.default.createElement(_react.default.Fragment, null, connectionType.description, connectionType.url ? /*#__PURE__*/_react.default.createElement(_IconButton.default, {
       href: connectionType.url,
       rel: "noopener noreferrer",
       target: "_blank",
       color: "secondary"
-    }, /*#__PURE__*/_react["default"].createElement(_OpenInNew["default"], null)) : null) : null,
+    }, /*#__PURE__*/_react.default.createElement(_OpenInNew.default, null)) : null) : null,
     select: true,
     fullWidth: true,
     onChange: handleChange,
     variant: "outlined"
   }, connectionTypeChoices.map(function (connectionTypeChoice) {
-    return /*#__PURE__*/_react["default"].createElement(_MenuItem["default"], {
+    return /*#__PURE__*/_react.default.createElement(_MenuItem.default, {
       key: connectionTypeChoice.name,
       value: connectionTypeChoice.name
     }, connectionTypeChoice.displayName || connectionTypeChoice.name);
@@ -67,4 +67,4 @@ function ConnectionTypeSelect(props) {
 }
 
 var _default = ConnectionTypeSelect;
-exports["default"] = _default;
+exports.default = _default;

package/dist/AddConnectionWidget/index.js

@@ -9,7 +9,7 @@ exports.configSchema = void 0;
 Object.defineProperty(exports, "stateModel", {
   enumerable: true,
   get: function get() {
-    return _model["default"];
+    return _model.default;
   }
 });
 

package/dist/AddConnectionWidget/model.js

@@ -3,7 +3,7 @@
 Object.defineProperty(exports, "__esModule", {
   value: true
 });
-exports["default"] = void 0;
+exports.default = void 0;
 
 var _mobxStateTree = require("mobx-state-tree");
 
@@ -14,4 +14,4 @@ var _default = _mobxStateTree.types.model('AddConnectionModel', {
   type: _mobxStateTree.types.literal('AddConnectionWidget')
 });
 
-exports["default"] = _default;
+exports.default = _default;

package/dist/AddTrackWidget/components/AddTrackWidget.js

@@ -7,7 +7,7 @@ var _typeof = require("@babel/runtime/helpers/typeof");
 Object.defineProperty(exports, "__esModule", {
   value: true
 });
-exports["default"] = void 0;
+exports.default = void 0;
 
 var _regenerator = _interopRequireDefault(require("@babel/runtime/regenerator"));
 
@@ -27,6 +27,8 @@ var _configuration = require("@jbrowse/core/configuration");
 
 var _mobxReact = require("mobx-react");
 
+var _mobxStateTree = require("mobx-state-tree");
+
 var _lab = require("@material-ui/lab");
 
 var _ConfirmTrack = _interopRequireDefault(require("./ConfirmTrack"));
@@ -35,11 +37,11 @@ var _TrackSourceSelect = _interopRequireDefault(require("./TrackSourceSelect"));
 
 function _getRequireWildcardCache(nodeInterop) { if (typeof WeakMap !== "function") return null; var cacheBabelInterop = new WeakMap(); var cacheNodeInterop = new WeakMap(); return (_getRequireWildcardCache = function _getRequireWildcardCache(nodeInterop) { return nodeInterop ? cacheNodeInterop : cacheBabelInterop; })(nodeInterop); }
 
-function _interopRequireWildcard(obj, nodeInterop) { if (!nodeInterop && obj && obj.__esModule) { return obj; } if (obj === null || _typeof(obj) !== "object" && typeof obj !== "function") { return { "default": obj }; } var cache = _getRequireWildcardCache(nodeInterop); if (cache && cache.has(obj)) { return cache.get(obj); } var newObj = {}; var hasPropertyDescriptor = Object.defineProperty && Object.getOwnPropertyDescriptor; for (var key in obj) { if (key !== "default" && Object.prototype.hasOwnProperty.call(obj, key)) { var desc = hasPropertyDescriptor ? Object.getOwnPropertyDescriptor(obj, key) : null; if (desc && (desc.get || desc.set)) { Object.defineProperty(newObj, key, desc); } else { newObj[key] = obj[key]; } } } newObj["default"] = obj; if (cache) { cache.set(obj, newObj); } return newObj; }
+function _interopRequireWildcard(obj, nodeInterop) { if (!nodeInterop && obj && obj.__esModule) { return obj; } if (obj === null || _typeof(obj) !== "object" && typeof obj !== "function") { return { default: obj }; } var cache = _getRequireWildcardCache(nodeInterop); if (cache && cache.has(obj)) { return cache.get(obj); } var newObj = {}; var hasPropertyDescriptor = Object.defineProperty && Object.getOwnPropertyDescriptor; for (var key in obj) { if (key !== "default" && Object.prototype.hasOwnProperty.call(obj, key)) { var desc = hasPropertyDescriptor ? Object.getOwnPropertyDescriptor(obj, key) : null; if (desc && (desc.get || desc.set)) { Object.defineProperty(newObj, key, desc); } else { newObj[key] = obj[key]; } } } newObj.default = obj; if (cache) { cache.set(obj, newObj); } return newObj; }
 
 function ownKeys(object, enumerableOnly) { var keys = Object.keys(object); if (Object.getOwnPropertySymbols) { var symbols = Object.getOwnPropertySymbols(object); enumerableOnly && (symbols = symbols.filter(function (sym) { return Object.getOwnPropertyDescriptor(object, sym).enumerable; })), keys.push.apply(keys, symbols); } return keys; }
 
-function _objectSpread(target) { for (var i = 1; i < arguments.length; i++) { var source = null != arguments[i] ? arguments[i] : {}; i % 2 ? ownKeys(Object(source), !0).forEach(function (key) { (0, _defineProperty2["default"])(target, key, source[key]); }) : Object.getOwnPropertyDescriptors ? Object.defineProperties(target, Object.getOwnPropertyDescriptors(source)) : ownKeys(Object(source)).forEach(function (key) { Object.defineProperty(target, key, Object.getOwnPropertyDescriptor(source, key)); }); } return target; }
+function _objectSpread(target) { for (var i = 1; i < arguments.length; i++) { var source = null != arguments[i] ? arguments[i] : {}; i % 2 ? ownKeys(Object(source), !0).forEach(function (key) { (0, _defineProperty2.default)(target, key, source[key]); }) : Object.getOwnPropertyDescriptors ? Object.defineProperties(target, Object.getOwnPropertyDescriptors(source)) : ownKeys(Object(source)).forEach(function (key) { Object.defineProperty(target, key, Object.getOwnPropertyDescriptor(source, key)); }); } return target; }
 
 var useStyles = (0, _core.makeStyles)(function (theme) {
   return {
@@ -47,7 +49,7 @@ var useStyles = (0, _core.makeStyles)(function (theme) {
       marginTop: theme.spacing(1)
     },
     stepper: {
-      backgroundColor: theme.palette.background["default"]
+      backgroundColor: theme.palette.background.default
     },
     button: {
       marginTop: theme.spacing(1),
@@ -70,37 +72,45 @@ function AddTrackWidget(_ref) {
   var model = _ref.model;
 
   var _useState = (0, _react.useState)(0),
-      _useState2 = (0, _slicedToArray2["default"])(_useState, 2),
+      _useState2 = (0, _slicedToArray2.default)(_useState, 2),
       activeStep = _useState2[0],
       setActiveStep = _useState2[1];
 
   var classes = useStyles();
   var session = (0, _util.getSession)(model);
+
+  var _getEnv = (0, _mobxStateTree.getEnv)(session),
+      pluginManager = _getEnv.pluginManager;
+
+  var rootModel = pluginManager.rootModel;
+  var jobsManager = rootModel.jobsManager;
   var assembly = model.assembly,
       trackAdapter = model.trackAdapter,
       trackData = model.trackData,
       trackName = model.trackName,
-      trackType = model.trackType;
+      trackType = model.trackType,
+      textIndexTrack = model.textIndexTrack,
+      textIndexingConf = model.textIndexingConf;
 
   var _useState3 = (0, _react.useState)(),
-      _useState4 = (0, _slicedToArray2["default"])(_useState3, 2),
+      _useState4 = (0, _slicedToArray2.default)(_useState3, 2),
       trackErrorMessage = _useState4[0],
       setTrackErrorMessage = _useState4[1];
 
   function getStepContent(step) {
     switch (step) {
       case 0:
-        return /*#__PURE__*/_react["default"].createElement(_TrackSourceSelect["default"], {
+        return /*#__PURE__*/_react.default.createElement(_TrackSourceSelect.default, {
           model: model
         });
 
       case 1:
-        return /*#__PURE__*/_react["default"].createElement(_ConfirmTrack["default"], {
+        return /*#__PURE__*/_react.default.createElement(_ConfirmTrack.default, {
           model: model
         });
 
       default:
-        return /*#__PURE__*/_react["default"].createElement(_core.Typography, null, "Unknown step");
+        return /*#__PURE__*/_react.default.createElement(_core.Typography, null, "Unknown step");
     }
   }
 
@@ -109,9 +119,9 @@ function AddTrackWidget(_ref) {
   }
 
   function _handleNext() {
-    _handleNext = (0, _asyncToGenerator2["default"])( /*#__PURE__*/_regenerator["default"].mark(function _callee() {
-      var trackId, assemblyInstance;
-      return _regenerator["default"].wrap(function _callee$(_context) {
+    _handleNext = (0, _asyncToGenerator2.default)( /*#__PURE__*/_regenerator.default.mark(function _callee() {
+      var trackId, assemblyInstance, textSearchingDefault, attr, indexName, indexingParams, newEntry;
+      return _regenerator.default.wrap(function _callee$(_context) {
         while (1) {
           switch (_context.prev = _context.next) {
             case 0:
@@ -138,9 +148,35 @@ function AddTrackWidget(_ref) {
                     sequenceAdapter: (0, _configuration.getConf)(assemblyInstance, ['sequence', 'adapter'])
                   })
                 });
+                textSearchingDefault = {
+                  attributes: ['Name', 'ID'],
+                  exclude: ['CDS', 'exon']
+                };
 
                 if (model.view) {
                   model.view.showTrack(trackId);
+
+                  if (_util.isElectron) {
+                    if (textIndexTrack && (0, _util.supportedIndexingAdapters)(trackAdapter.type)) {
+                      attr = textIndexingConf || textSearchingDefault;
+                      indexName = trackName + '-index';
+                      indexingParams = _objectSpread(_objectSpread({}, attr), {}, {
+                        assemblies: [assembly],
+                        tracks: [trackId],
+                        indexType: 'perTrack',
+                        name: indexName,
+                        timestamp: new Date().toISOString()
+                      });
+                      newEntry = {
+                        indexingParams: indexingParams,
+                        name: indexName,
+                        cancelCallback: function cancelCallback() {
+                          jobsManager.abortJob();
+                        }
+                      };
+                      jobsManager.queueJob(newEntry);
+                    }
+                  }
                 } else {
                   session.notify('Open a new view, or use the track selector in an existing view, to view this track', 'info');
                 }
@@ -180,31 +216,31 @@ function AddTrackWidget(_ref) {
     }
   }
 
-  return /*#__PURE__*/_react["default"].createElement("div", {
+  return /*#__PURE__*/_react.default.createElement("div", {
     className: classes.root
-  }, /*#__PURE__*/_react["default"].createElement(_core.Stepper, {
+  }, /*#__PURE__*/_react.default.createElement(_core.Stepper, {
     className: classes.stepper,
     activeStep: activeStep,
     orientation: "vertical"
   }, steps.map(function (label, idx) {
-    return /*#__PURE__*/_react["default"].createElement(_core.Step, {
+    return /*#__PURE__*/_react.default.createElement(_core.Step, {
       key: label
-    }, /*#__PURE__*/_react["default"].createElement(_core.StepLabel, null, label), /*#__PURE__*/_react["default"].createElement(_core.StepContent, null, getStepContent(idx), /*#__PURE__*/_react["default"].createElement("div", {
+    }, /*#__PURE__*/_react.default.createElement(_core.StepLabel, null, label), /*#__PURE__*/_react.default.createElement(_core.StepContent, null, getStepContent(idx), /*#__PURE__*/_react.default.createElement("div", {
       className: classes.actionsContainer
-    }, /*#__PURE__*/_react["default"].createElement(_core.Button, {
+    }, /*#__PURE__*/_react.default.createElement(_core.Button, {
       disabled: activeStep === 0,
       onClick: handleBack,
       className: classes.button
-    }, "Back"), /*#__PURE__*/_react["default"].createElement(_core.Button, {
+    }, "Back"), /*#__PURE__*/_react.default.createElement(_core.Button, {
       disabled: isNextDisabled(),
       variant: "contained",
       color: "primary",
       onClick: handleNext,
       className: classes.button,
       "data-testid": "addTrackNextButton"
-    }, activeStep === steps.length - 1 ? 'Add' : 'Next')), trackErrorMessage ? /*#__PURE__*/_react["default"].createElement("div", {
+    }, activeStep === steps.length - 1 ? 'Add' : 'Next')), trackErrorMessage ? /*#__PURE__*/_react.default.createElement("div", {
       className: classes.alertContainer
-    }, /*#__PURE__*/_react["default"].createElement(_lab.Alert, {
+    }, /*#__PURE__*/_react.default.createElement(_lab.Alert, {
       severity: "error"
     }, trackErrorMessage)) : null));
   })));
@@ -212,4 +248,4 @@ function AddTrackWidget(_ref) {
 
 var _default = (0, _mobxReact.observer)(AddTrackWidget);
 
-exports["default"] = _default;
+exports.default = _default;

package/dist/AddTrackWidget/components/AddTrackWidget.test.js

@@ -96,21 +96,21 @@ describe('<AddTrackWidget />', function () {
   });
   afterEach(_react2.cleanup);
   it('renders', function () {
-    var _render = (0, _react2.render)( /*#__PURE__*/_react["default"].createElement(_AddTrackWidget["default"], {
+    var _render = (0, _react2.render)( /*#__PURE__*/_react.default.createElement(_AddTrackWidget.default, {
       model: model
     })),
         container = _render.container;
 
     expect(container.firstChild).toMatchSnapshot();
   });
-  it('adds a track', /*#__PURE__*/(0, _asyncToGenerator2["default"])( /*#__PURE__*/_regenerator["default"].mark(function _callee() {
+  it('adds a track', /*#__PURE__*/(0, _asyncToGenerator2.default)( /*#__PURE__*/_regenerator.default.mark(function _callee() {
     var _render2, getByTestId, getAllByTestId, findByText, findAllByText, bamAdapter, trackTypeSelect, featureTrack, assemblyNameSelect, volMyt1;
 
-    return _regenerator["default"].wrap(function _callee$(_context) {
+    return _regenerator.default.wrap(function _callee$(_context) {
       while (1) {
         switch (_context.prev = _context.next) {
           case 0:
-            _render2 = (0, _react2.render)( /*#__PURE__*/_react["default"].createElement(_AddTrackWidget["default"], {
+            _render2 = (0, _react2.render)( /*#__PURE__*/_react.default.createElement(_AddTrackWidget.default, {
               model: model
             })), getByTestId = _render2.getByTestId, getAllByTestId = _render2.getAllByTestId, findByText = _render2.findByText, findAllByText = _render2.findAllByText;
             expect(session.sessionTracks.length).toBe(1);
@@ -174,14 +174,14 @@ describe('<AddTrackWidget />', function () {
       }
     }, _callee);
   })));
-  xit('fails to add a track', /*#__PURE__*/(0, _asyncToGenerator2["default"])( /*#__PURE__*/_regenerator["default"].mark(function _callee2() {
+  xit('fails to add a track', /*#__PURE__*/(0, _asyncToGenerator2.default)( /*#__PURE__*/_regenerator.default.mark(function _callee2() {
     var _render3, getByTestId, getAllByTestId, findByText, chrom;
 
-    return _regenerator["default"].wrap(function _callee2$(_context2) {
+    return _regenerator.default.wrap(function _callee2$(_context2) {
       while (1) {
         switch (_context2.prev = _context2.next) {
           case 0:
-            _render3 = (0, _react2.render)( /*#__PURE__*/_react["default"].createElement(_AddTrackWidget["default"], {
+            _render3 = (0, _react2.render)( /*#__PURE__*/_react.default.createElement(_AddTrackWidget.default, {
               model: model
             })), getByTestId = _render3.getByTestId, getAllByTestId = _render3.getAllByTestId, findByText = _render3.findByText;
             expect(session.sessionTracks.length).toBe(2);