@jbrowse/plugin-data-management 1.5.1 → 1.5.2

package/dist/plugin-data-management.cjs.production.min.js

@@ -1,2 +1,2 @@
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t,a=e.height,o=e.tree,i=e.model,l=i.filterText,c=i.view,s=n.useRef(null),d=ce(n.useState(),2),m=d[0],p=d[1],f=u.getSession(i),g=f.drawerPosition,y=n.useMemo((function(){return{onChange:function(e){return c.toggleTrack(e)},toggleCollapse:function(e){return i.toggleCategory(e)},onMoreInfo:p,drawerPosition:g}}),[c,i,g]),h=n.useCallback(ge.mark((function e(){var t,n,r,a;return ge.wrap((function(e){for(;;)switch(e.prev=e.next){case 0:t=0;case 1:if(!(t<o.children.length)){e.next=7;break}return e.next=4,vt(o.children[t],0,y);case 4:t++,e.next=1;break;case 7:return void(e.next=10);case 10:n=e.sent,r=0;case 12:if(!(r<n.node.children.length)){e.next=19;break}return a=n.node.children[r],e.next=16,vt(a,n.nestingLevel+1,y);case 16:r++,e.next=12;break;case 19:e.next=7;break;case 21:case"end":return e.stop()}}),e)})),[o,y]),v=null==m?void 0:m.conf,b=v&&(null===(t=f.getTrackActionMenuItems)||void 0===t?void 0:t.call(f,v))||[];return 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d?r.createElement(r.Fragment,null,r.createElement(Ct,{model:t,setHeaderHeight:u[1],setAssemblyIdx:c,assemblyIdx:l}),r.createElement(Et,{tree:t.hierarchy(d),model:t,offset:o+s})):null})),xt={__proto__:null,default:Tt},St=g.makeStyles((function(e){return{spacing:{marginBottom:e.spacing(3)}}}));function Lt(e){var t,n=e.trackAdapter,a=e.trackType,o=St();return"SNPCoverageAdapter"===n.type?r.createElement(g.Typography,{className:o.spacing},"Selected ",r.createElement("code",null,a),". 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t=e.model,a=ue(n.useState({}),2),o=a[0],i=a[1],l=ue(n.useState({}),2),c=l[0],d=l[1],m=ue(n.useState(!0),2),p=m[0],f=m[1],g=ue(n.useState(0),2),h=g[0],y=g[1],v=zt(),b=u.getSession(t),E=s.getEnv(b).pluginManager;function k(e){i(e),d(e.configSchema.create({connectionId:"".concat(e.name,"-").concat(Date.now())},s.getEnv(t)))}function C(){var e;h===Gt.length-1?(e=b.addConnectionConf(c),b.makeConnection(e),b.hideWidget(t)):y(h+1)}function T(){y(h-1)}return r.createElement("div",{className:v.root},r.createElement(V,{className:v.stepper,activeStep:h,orientation:"vertical"},Gt.map((function(e){return r.createElement(z,{key:e},r.createElement(J,null,e),r.createElement(G,null,function(){switch(h){case 0:return r.createElement(Ht,{connectionTypeChoices:E.getElementTypesInGroup("connection"),connectionType:o,setConnectionType:k});case 1:return r.createElement(qt,{connectionType:o,model:c,setModelReady:f});default:return r.createElement(Y,null,"Unknown 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0===e||e.call(n,o)),a()}},"OK")))}var Xt={__proto__:null,default:f.observer(Qt)},$t=g.makeStyles((function(e){return{closeButton:{position:"absolute",right:e.spacing(1),top:e.spacing(1),color:e.palette.grey[500]},connectionContainer:{margin:e.spacing(4),width:500}}}));function Zt(e){var t=e.session,n=e.handleClose,a=e.breakConnection,o=$t(),i=t.adminMode,l=t.connections,u=t.sessionConnections;return r.createElement(g.Dialog,{open:!0,onClose:n,maxWidth:"lg"},r.createElement(g.DialogTitle,null,"Delete connections",r.createElement(g.IconButton,{className:o.closeButton,onClick:function(){return n()}},r.createElement(E,null))),r.createElement(g.DialogContent,null,r.createElement(g.Typography,null,"Click the X icon to delete the connection from your config completely"),r.createElement("div",{className:o.connectionContainer},l.map((function(e){var t=c.readConfObject(e,"name");return r.createElement("div",{key:"conn-".concat(t)},r.createElement(g.Typography,null,i||null!=u&&u.includes(e)?r.createElement(g.IconButton,{onClick:function(){return a(e,!0)}},r.createElement(E,{color:"error"})):r.createElement(g.Tooltip,{title:"Unable to delete connection in config file as non-admin user"},r.createElement(g.IconButton,null,r.createElement(E,{color:"disabled"}))),t))})),l.length?null:r.createElement(g.Typography,null,"No connections found"))),r.createElement(g.DialogActions,null,r.createElement(g.Button,{onClick:function(){return n()},variant:"contained",color:"primary"},"Close")))}var en={__proto__:null,default:f.observer(Zt)},tn=g.makeStyles((function(e){return{closeButton:{position:"absolute",right:e.spacing(1),top:e.spacing(1),color:e.palette.grey[500]},connectionContainer:{width:500,margin:e.spacing(4)}}}));function nn(e){var t=e.session,n=e.handleClose,a=e.assemblyName,o=e.breakConnection,i=tn(),l=t.connectionInstances,u=t.connections.filter((function(e){var t=c.readConfObject(e,"assemblyNames");return 0===t.length||t.includes(a)}));return r.createElement(g.Dialog,{open:!0,onClose:n,maxWidth:"lg"},r.createElement(g.DialogTitle,null,"Turn on/off connections",r.createElement(g.IconButton,{className:i.closeButton,onClick:function(){return n()}},r.createElement(E,null))),r.createElement(g.DialogContent,null,r.createElement(g.Typography,null,"Use the checkbox to turn on/off connections"),r.createElement("div",{className:i.connectionContainer},u.map((function(e){var n=c.readConfObject(e,"name");return r.createElement("div",{key:e.connectionId},r.createElement(g.FormControlLabel,{control:r.createElement(g.Checkbox,{checked:!(null==l||!l.find((function(e){return n===e.name}))),onChange:function(){var n;null!=l&&l.find((function(t){return t.name===c.readConfObject(e,"name")}))?o(e):null===(n=t.makeConnection)||void 0===n||n.call(t,e)},color:"primary"}),label:n}))})),u.length?null:r.createElement(g.Typography,null,"No connections found for ",a))),r.createElement(g.DialogActions,null,r.createElement(g.Button,{onClick:function(){return n()},variant:"contained",color:"primary"},"Close")))}var rn={__proto__:null,default:f.observer(nn)};exports.AssemblyManager=et,exports.SetDefaultSession=Ze,exports.default=tt;
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