@jbrowse/plugin-config 1.7.3 → 1.7.6

This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
Files changed (26) hide show
  1. package/dist/ConfigurationEditorWidget/components/CallbackEditor.js +12 -12
  2. package/dist/ConfigurationEditorWidget/components/CodeEditor.js +6 -6
  3. package/dist/ConfigurationEditorWidget/components/ColorEditor.js +18 -18
  4. package/dist/ConfigurationEditorWidget/components/ColorEditor.test.js +1 -1
  5. package/dist/ConfigurationEditorWidget/components/ColorPicker.js +9 -9
  6. package/dist/ConfigurationEditorWidget/components/ConfigurationEditor.js +19 -19
  7. package/dist/ConfigurationEditorWidget/components/ConfigurationEditor.test.js +4 -4
  8. package/dist/ConfigurationEditorWidget/components/JsonEditor.js +12 -12
  9. package/dist/ConfigurationEditorWidget/components/SlotEditor.js +70 -70
  10. package/dist/ConfigurationEditorWidget/components/TypeSelector.js +6 -6
  11. package/dist/ConfigurationEditorWidget/index.js +1 -1
  12. package/dist/ConfigurationEditorWidget/model.js +2 -2
  13. package/dist/FromConfigAdapter/FromConfigAdapter.js +16 -16
  14. package/dist/FromConfigAdapter/FromConfigAdapter.test.js +6 -6
  15. package/dist/FromConfigAdapter/FromConfigRegionsAdapter.js +12 -12
  16. package/dist/FromConfigAdapter/FromConfigRegionsAdapter.test.js +12 -12
  17. package/dist/FromConfigAdapter/FromConfigSequenceAdapter.js +16 -16
  18. package/dist/FromConfigAdapter/FromConfigSequenceAdapter.test.js +6 -6
  19. package/dist/FromConfigAdapter/index.js +3 -3
  20. package/dist/RefNameAliasAdapter/RefNameAliasAdapter.js +11 -11
  21. package/dist/RefNameAliasAdapter/RefNameAliasAdapter.test.js +3 -3
  22. package/dist/RefNameAliasAdapter/configSchema.js +2 -2
  23. package/dist/RefNameAliasAdapter/index.js +2 -2
  24. package/dist/index.js +15 -15
  25. package/dist/index.test.js +2 -2
  26. package/package.json +3 -3
@@ -5,7 +5,7 @@ var _interopRequireDefault = require("@babel/runtime/helpers/interopRequireDefau
5
5
  Object.defineProperty(exports, "__esModule", {
6
6
  value: true
7
7
  });
8
- exports["default"] = void 0;
8
+ exports.default = void 0;
9
9
 
10
10
  var _regenerator = _interopRequireDefault(require("@babel/runtime/regenerator"));
11
11
 
@@ -33,13 +33,13 @@ var _configuration = require("@jbrowse/core/configuration");
33
33
 
34
34
  var _FromConfigAdapter = _interopRequireDefault(require("./FromConfigAdapter"));
35
35
 
36
- function _createForOfIteratorHelper(o, allowArrayLike) { var it = typeof Symbol !== "undefined" && o[Symbol.iterator] || o["@@iterator"]; if (!it) { if (Array.isArray(o) || (it = _unsupportedIterableToArray(o)) || allowArrayLike && o && typeof o.length === "number") { if (it) o = it; var i = 0; var F = function F() {}; return { s: F, n: function n() { if (i >= o.length) return { done: true }; return { done: false, value: o[i++] }; }, e: function e(_e) { throw _e; }, f: F }; } throw new TypeError("Invalid attempt to iterate non-iterable instance.\nIn order to be iterable, non-array objects must have a [Symbol.iterator]() method."); } var normalCompletion = true, didErr = false, err; return { s: function s() { it = it.call(o); }, n: function n() { var step = it.next(); normalCompletion = step.done; return step; }, e: function e(_e2) { didErr = true; err = _e2; }, f: function f() { try { if (!normalCompletion && it["return"] != null) it["return"](); } finally { if (didErr) throw err; } } }; }
36
+ function _createForOfIteratorHelper(o, allowArrayLike) { var it = typeof Symbol !== "undefined" && o[Symbol.iterator] || o["@@iterator"]; if (!it) { if (Array.isArray(o) || (it = _unsupportedIterableToArray(o)) || allowArrayLike && o && typeof o.length === "number") { if (it) o = it; var i = 0; var F = function F() {}; return { s: F, n: function n() { if (i >= o.length) return { done: true }; return { done: false, value: o[i++] }; }, e: function e(_e) { throw _e; }, f: F }; } throw new TypeError("Invalid attempt to iterate non-iterable instance.\nIn order to be iterable, non-array objects must have a [Symbol.iterator]() method."); } var normalCompletion = true, didErr = false, err; return { s: function s() { it = it.call(o); }, n: function n() { var step = it.next(); normalCompletion = step.done; return step; }, e: function e(_e2) { didErr = true; err = _e2; }, f: function f() { try { if (!normalCompletion && it.return != null) it.return(); } finally { if (didErr) throw err; } } }; }
37
37
 
38
38
  function _unsupportedIterableToArray(o, minLen) { if (!o) return; if (typeof o === "string") return _arrayLikeToArray(o, minLen); var n = Object.prototype.toString.call(o).slice(8, -1); if (n === "Object" && o.constructor) n = o.constructor.name; if (n === "Map" || n === "Set") return Array.from(o); if (n === "Arguments" || /^(?:Ui|I)nt(?:8|16|32)(?:Clamped)?Array$/.test(n)) return _arrayLikeToArray(o, minLen); }
39
39
 
40
40
  function _arrayLikeToArray(arr, len) { if (len == null || len > arr.length) len = arr.length; for (var i = 0, arr2 = new Array(len); i < len; i++) { arr2[i] = arr[i]; } return arr2; }
41
41
 
42
- function _createSuper(Derived) { var hasNativeReflectConstruct = _isNativeReflectConstruct(); return function _createSuperInternal() { var Super = (0, _getPrototypeOf2["default"])(Derived), result; if (hasNativeReflectConstruct) { var NewTarget = (0, _getPrototypeOf2["default"])(this).constructor; result = Reflect.construct(Super, arguments, NewTarget); } else { result = Super.apply(this, arguments); } return (0, _possibleConstructorReturn2["default"])(this, result); }; }
42
+ function _createSuper(Derived) { var hasNativeReflectConstruct = _isNativeReflectConstruct(); return function _createSuperInternal() { var Super = (0, _getPrototypeOf2.default)(Derived), result; if (hasNativeReflectConstruct) { var NewTarget = (0, _getPrototypeOf2.default)(this).constructor; result = Reflect.construct(Super, arguments, NewTarget); } else { result = Super.apply(this, arguments); } return (0, _possibleConstructorReturn2.default)(this, result); }; }
43
43
 
44
44
  function _isNativeReflectConstruct() { if (typeof Reflect === "undefined" || !Reflect.construct) return false; if (Reflect.construct.sham) return false; if (typeof Proxy === "function") return true; try { Boolean.prototype.valueOf.call(Reflect.construct(Boolean, [], function () {})); return true; } catch (e) { return false; } }
45
45
 
@@ -49,18 +49,18 @@ function _isNativeReflectConstruct() { if (typeof Reflect === "undefined" || !Re
49
49
  * `"features": [ { "refName": "ctgA", "start":1, "end":20 }, ... ]`
50
50
  */
51
51
  var FromConfigRegionsAdapter = /*#__PURE__*/function (_BaseAdapter) {
52
- (0, _inherits2["default"])(FromConfigRegionsAdapter, _BaseAdapter);
52
+ (0, _inherits2.default)(FromConfigRegionsAdapter, _BaseAdapter);
53
53
 
54
54
  var _super = _createSuper(FromConfigRegionsAdapter);
55
55
 
56
56
  function FromConfigRegionsAdapter(config, getSubAdapter, pluginManager) {
57
57
  var _this;
58
58
 
59
- (0, _classCallCheck2["default"])(this, FromConfigRegionsAdapter);
59
+ (0, _classCallCheck2.default)(this, FromConfigRegionsAdapter);
60
60
  _this = _super.call(this, config, getSubAdapter, pluginManager);
61
- (0, _defineProperty2["default"])((0, _assertThisInitialized2["default"])(_this), "features", void 0);
61
+ (0, _defineProperty2.default)((0, _assertThisInitialized2.default)(_this), "features", void 0);
62
62
  var features = (0, _configuration.readConfObject)(config, 'features');
63
- _this.features = _FromConfigAdapter["default"].makeFeatures(features || []);
63
+ _this.features = _FromConfigAdapter.default.makeFeatures(features || []);
64
64
  return _this;
65
65
  }
66
66
  /**
@@ -68,13 +68,13 @@ var FromConfigRegionsAdapter = /*#__PURE__*/function (_BaseAdapter) {
68
68
  */
69
69
 
70
70
 
71
- (0, _createClass2["default"])(FromConfigRegionsAdapter, [{
71
+ (0, _createClass2.default)(FromConfigRegionsAdapter, [{
72
72
  key: "getRegions",
73
73
  value: function () {
74
- var _getRegions = (0, _asyncToGenerator2["default"])( /*#__PURE__*/_regenerator["default"].mark(function _callee() {
74
+ var _getRegions = (0, _asyncToGenerator2.default)( /*#__PURE__*/_regenerator.default.mark(function _callee() {
75
75
  var regions, _iterator, _step, _step$value, refName, features, currentRegion, _iterator2, _step2, feature;
76
76
 
77
- return _regenerator["default"].wrap(function _callee$(_context) {
77
+ return _regenerator.default.wrap(function _callee$(_context) {
78
78
  while (1) {
79
79
  switch (_context.prev = _context.next) {
80
80
  case 0:
@@ -84,7 +84,7 @@ var FromConfigRegionsAdapter = /*#__PURE__*/function (_BaseAdapter) {
84
84
 
85
85
  try {
86
86
  for (_iterator.s(); !(_step = _iterator.n()).done;) {
87
- _step$value = (0, _slicedToArray2["default"])(_step.value, 2), refName = _step$value[0], features = _step$value[1];
87
+ _step$value = (0, _slicedToArray2.default)(_step.value, 2), refName = _step$value[0], features = _step$value[1];
88
88
  currentRegion = void 0;
89
89
  _iterator2 = _createForOfIteratorHelper(features);
90
90
 
@@ -151,4 +151,4 @@ var FromConfigRegionsAdapter = /*#__PURE__*/function (_BaseAdapter) {
151
151
  return FromConfigRegionsAdapter;
152
152
  }(_BaseAdapter2.BaseAdapter);
153
153
 
154
- exports["default"] = FromConfigRegionsAdapter;
154
+ exports.default = FromConfigRegionsAdapter;
@@ -10,9 +10,9 @@ var _FromConfigRegionsAdapter = _interopRequireDefault(require("./FromConfigRegi
10
10
 
11
11
  var _configSchema = require("./configSchema");
12
12
 
13
- test('adapter can fetch regions 1', /*#__PURE__*/(0, _asyncToGenerator2["default"])( /*#__PURE__*/_regenerator["default"].mark(function _callee() {
13
+ test('adapter can fetch regions 1', /*#__PURE__*/(0, _asyncToGenerator2.default)( /*#__PURE__*/_regenerator.default.mark(function _callee() {
14
14
  var features, adapter, result;
15
- return _regenerator["default"].wrap(function _callee$(_context) {
15
+ return _regenerator.default.wrap(function _callee$(_context) {
16
16
  while (1) {
17
17
  switch (_context.prev = _context.next) {
18
18
  case 0:
@@ -32,7 +32,7 @@ test('adapter can fetch regions 1', /*#__PURE__*/(0, _asyncToGenerator2["default
32
32
  start: 50,
33
33
  end: 60
34
34
  }];
35
- adapter = new _FromConfigRegionsAdapter["default"](_configSchema.regionsConfigSchema.create({
35
+ adapter = new _FromConfigRegionsAdapter.default(_configSchema.regionsConfigSchema.create({
36
36
  features: features
37
37
  }));
38
38
  _context.next = 4;
@@ -57,9 +57,9 @@ test('adapter can fetch regions 1', /*#__PURE__*/(0, _asyncToGenerator2["default
57
57
  }
58
58
  }, _callee);
59
59
  })));
60
- test('adapter can fetch regions 2', /*#__PURE__*/(0, _asyncToGenerator2["default"])( /*#__PURE__*/_regenerator["default"].mark(function _callee2() {
60
+ test('adapter can fetch regions 2', /*#__PURE__*/(0, _asyncToGenerator2.default)( /*#__PURE__*/_regenerator.default.mark(function _callee2() {
61
61
  var features, adapter, result;
62
- return _regenerator["default"].wrap(function _callee2$(_context2) {
62
+ return _regenerator.default.wrap(function _callee2$(_context2) {
63
63
  while (1) {
64
64
  switch (_context2.prev = _context2.next) {
65
65
  case 0:
@@ -79,7 +79,7 @@ test('adapter can fetch regions 2', /*#__PURE__*/(0, _asyncToGenerator2["default
79
79
  start: 250,
80
80
  end: 400
81
81
  }];
82
- adapter = new _FromConfigRegionsAdapter["default"](_configSchema.regionsConfigSchema.create({
82
+ adapter = new _FromConfigRegionsAdapter.default(_configSchema.regionsConfigSchema.create({
83
83
  features: features
84
84
  }));
85
85
  _context2.next = 4;
@@ -104,9 +104,9 @@ test('adapter can fetch regions 2', /*#__PURE__*/(0, _asyncToGenerator2["default
104
104
  }
105
105
  }, _callee2);
106
106
  })));
107
- test('adapter can fetch regions 3', /*#__PURE__*/(0, _asyncToGenerator2["default"])( /*#__PURE__*/_regenerator["default"].mark(function _callee3() {
107
+ test('adapter can fetch regions 3', /*#__PURE__*/(0, _asyncToGenerator2.default)( /*#__PURE__*/_regenerator.default.mark(function _callee3() {
108
108
  var features, adapter, result;
109
- return _regenerator["default"].wrap(function _callee3$(_context3) {
109
+ return _regenerator.default.wrap(function _callee3$(_context3) {
110
110
  while (1) {
111
111
  switch (_context3.prev = _context3.next) {
112
112
  case 0:
@@ -126,7 +126,7 @@ test('adapter can fetch regions 3', /*#__PURE__*/(0, _asyncToGenerator2["default
126
126
  start: 50,
127
127
  end: 60
128
128
  }];
129
- adapter = new _FromConfigRegionsAdapter["default"](_configSchema.regionsConfigSchema.create({
129
+ adapter = new _FromConfigRegionsAdapter.default(_configSchema.regionsConfigSchema.create({
130
130
  features: features
131
131
  }));
132
132
  _context3.next = 4;
@@ -151,9 +151,9 @@ test('adapter can fetch regions 3', /*#__PURE__*/(0, _asyncToGenerator2["default
151
151
  }
152
152
  }, _callee3);
153
153
  })));
154
- test('adapter can fetch regions 4', /*#__PURE__*/(0, _asyncToGenerator2["default"])( /*#__PURE__*/_regenerator["default"].mark(function _callee4() {
154
+ test('adapter can fetch regions 4', /*#__PURE__*/(0, _asyncToGenerator2.default)( /*#__PURE__*/_regenerator.default.mark(function _callee4() {
155
155
  var features, adapter, result;
156
- return _regenerator["default"].wrap(function _callee4$(_context4) {
156
+ return _regenerator.default.wrap(function _callee4$(_context4) {
157
157
  while (1) {
158
158
  switch (_context4.prev = _context4.next) {
159
159
  case 0:
@@ -173,7 +173,7 @@ test('adapter can fetch regions 4', /*#__PURE__*/(0, _asyncToGenerator2["default
173
173
  start: 50,
174
174
  end: 60
175
175
  }];
176
- adapter = new _FromConfigRegionsAdapter["default"](_configSchema.regionsConfigSchema.create({
176
+ adapter = new _FromConfigRegionsAdapter.default(_configSchema.regionsConfigSchema.create({
177
177
  features: features
178
178
  }));
179
179
  _context4.next = 4;
@@ -5,7 +5,7 @@ var _interopRequireDefault = require("@babel/runtime/helpers/interopRequireDefau
5
5
  Object.defineProperty(exports, "__esModule", {
6
6
  value: true
7
7
  });
8
- exports["default"] = void 0;
8
+ exports.default = void 0;
9
9
 
10
10
  var _regenerator = _interopRequireDefault(require("@babel/runtime/regenerator"));
11
11
 
@@ -35,7 +35,7 @@ var _operators = require("rxjs/operators");
35
35
 
36
36
  var _FromConfigAdapter2 = _interopRequireDefault(require("./FromConfigAdapter"));
37
37
 
38
- function _createForOfIteratorHelper(o, allowArrayLike) { var it = typeof Symbol !== "undefined" && o[Symbol.iterator] || o["@@iterator"]; if (!it) { if (Array.isArray(o) || (it = _unsupportedIterableToArray(o)) || allowArrayLike && o && typeof o.length === "number") { if (it) o = it; var i = 0; var F = function F() {}; return { s: F, n: function n() { if (i >= o.length) return { done: true }; return { done: false, value: o[i++] }; }, e: function e(_e) { throw _e; }, f: F }; } throw new TypeError("Invalid attempt to iterate non-iterable instance.\nIn order to be iterable, non-array objects must have a [Symbol.iterator]() method."); } var normalCompletion = true, didErr = false, err; return { s: function s() { it = it.call(o); }, n: function n() { var step = it.next(); normalCompletion = step.done; return step; }, e: function e(_e2) { didErr = true; err = _e2; }, f: function f() { try { if (!normalCompletion && it["return"] != null) it["return"](); } finally { if (didErr) throw err; } } }; }
38
+ function _createForOfIteratorHelper(o, allowArrayLike) { var it = typeof Symbol !== "undefined" && o[Symbol.iterator] || o["@@iterator"]; if (!it) { if (Array.isArray(o) || (it = _unsupportedIterableToArray(o)) || allowArrayLike && o && typeof o.length === "number") { if (it) o = it; var i = 0; var F = function F() {}; return { s: F, n: function n() { if (i >= o.length) return { done: true }; return { done: false, value: o[i++] }; }, e: function e(_e) { throw _e; }, f: F }; } throw new TypeError("Invalid attempt to iterate non-iterable instance.\nIn order to be iterable, non-array objects must have a [Symbol.iterator]() method."); } var normalCompletion = true, didErr = false, err; return { s: function s() { it = it.call(o); }, n: function n() { var step = it.next(); normalCompletion = step.done; return step; }, e: function e(_e2) { didErr = true; err = _e2; }, f: function f() { try { if (!normalCompletion && it.return != null) it.return(); } finally { if (didErr) throw err; } } }; }
39
39
 
40
40
  function _unsupportedIterableToArray(o, minLen) { if (!o) return; if (typeof o === "string") return _arrayLikeToArray(o, minLen); var n = Object.prototype.toString.call(o).slice(8, -1); if (n === "Object" && o.constructor) n = o.constructor.name; if (n === "Map" || n === "Set") return Array.from(o); if (n === "Arguments" || /^(?:Ui|I)nt(?:8|16|32)(?:Clamped)?Array$/.test(n)) return _arrayLikeToArray(o, minLen); }
41
41
 
@@ -43,23 +43,23 @@ function _arrayLikeToArray(arr, len) { if (len == null || len > arr.length) len
43
43
 
44
44
  function ownKeys(object, enumerableOnly) { var keys = Object.keys(object); if (Object.getOwnPropertySymbols) { var symbols = Object.getOwnPropertySymbols(object); enumerableOnly && (symbols = symbols.filter(function (sym) { return Object.getOwnPropertyDescriptor(object, sym).enumerable; })), keys.push.apply(keys, symbols); } return keys; }
45
45
 
46
- function _objectSpread(target) { for (var i = 1; i < arguments.length; i++) { var source = null != arguments[i] ? arguments[i] : {}; i % 2 ? ownKeys(Object(source), !0).forEach(function (key) { (0, _defineProperty2["default"])(target, key, source[key]); }) : Object.getOwnPropertyDescriptors ? Object.defineProperties(target, Object.getOwnPropertyDescriptors(source)) : ownKeys(Object(source)).forEach(function (key) { Object.defineProperty(target, key, Object.getOwnPropertyDescriptor(source, key)); }); } return target; }
46
+ function _objectSpread(target) { for (var i = 1; i < arguments.length; i++) { var source = null != arguments[i] ? arguments[i] : {}; i % 2 ? ownKeys(Object(source), !0).forEach(function (key) { (0, _defineProperty2.default)(target, key, source[key]); }) : Object.getOwnPropertyDescriptors ? Object.defineProperties(target, Object.getOwnPropertyDescriptors(source)) : ownKeys(Object(source)).forEach(function (key) { Object.defineProperty(target, key, Object.getOwnPropertyDescriptor(source, key)); }); } return target; }
47
47
 
48
- function _createSuper(Derived) { var hasNativeReflectConstruct = _isNativeReflectConstruct(); return function _createSuperInternal() { var Super = (0, _getPrototypeOf2["default"])(Derived), result; if (hasNativeReflectConstruct) { var NewTarget = (0, _getPrototypeOf2["default"])(this).constructor; result = Reflect.construct(Super, arguments, NewTarget); } else { result = Super.apply(this, arguments); } return (0, _possibleConstructorReturn2["default"])(this, result); }; }
48
+ function _createSuper(Derived) { var hasNativeReflectConstruct = _isNativeReflectConstruct(); return function _createSuperInternal() { var Super = (0, _getPrototypeOf2.default)(Derived), result; if (hasNativeReflectConstruct) { var NewTarget = (0, _getPrototypeOf2.default)(this).constructor; result = Reflect.construct(Super, arguments, NewTarget); } else { result = Super.apply(this, arguments); } return (0, _possibleConstructorReturn2.default)(this, result); }; }
49
49
 
50
50
  function _isNativeReflectConstruct() { if (typeof Reflect === "undefined" || !Reflect.construct) return false; if (Reflect.construct.sham) return false; if (typeof Proxy === "function") return true; try { Boolean.prototype.valueOf.call(Reflect.construct(Boolean, [], function () {})); return true; } catch (e) { return false; } }
51
51
 
52
52
  var FromConfigSequenceAdapter = /*#__PURE__*/function (_FromConfigAdapter) {
53
- (0, _inherits2["default"])(FromConfigSequenceAdapter, _FromConfigAdapter);
53
+ (0, _inherits2.default)(FromConfigSequenceAdapter, _FromConfigAdapter);
54
54
 
55
55
  var _super = _createSuper(FromConfigSequenceAdapter);
56
56
 
57
57
  function FromConfigSequenceAdapter() {
58
- (0, _classCallCheck2["default"])(this, FromConfigSequenceAdapter);
58
+ (0, _classCallCheck2.default)(this, FromConfigSequenceAdapter);
59
59
  return _super.apply(this, arguments);
60
60
  }
61
61
 
62
- (0, _createClass2["default"])(FromConfigSequenceAdapter, [{
62
+ (0, _createClass2.default)(FromConfigSequenceAdapter, [{
63
63
  key: "getFeatures",
64
64
  value:
65
65
  /**
@@ -74,11 +74,11 @@ var FromConfigSequenceAdapter = /*#__PURE__*/function (_FromConfigAdapter) {
74
74
  // xref: https://github.com/rollup/rollup/blob/master/CHANGELOG.md#bug-fixes-45
75
75
  // return ObservableCreate<Feature>(async observer => {
76
76
  // const feats = await super.getFeatures(region).pipe(toArray()).toPromise()
77
- var superGetFeatures = (0, _get2["default"])((0, _getPrototypeOf2["default"])(FromConfigSequenceAdapter.prototype), "getFeatures", this);
77
+ var superGetFeatures = (0, _get2.default)((0, _getPrototypeOf2.default)(FromConfigSequenceAdapter.prototype), "getFeatures", this);
78
78
  return (0, _rxjs.ObservableCreate)( /*#__PURE__*/function () {
79
- var _ref = (0, _asyncToGenerator2["default"])( /*#__PURE__*/_regenerator["default"].mark(function _callee(observer) {
79
+ var _ref = (0, _asyncToGenerator2.default)( /*#__PURE__*/_regenerator.default.mark(function _callee(observer) {
80
80
  var feats, feat;
81
- return _regenerator["default"].wrap(function _callee$(_context) {
81
+ return _regenerator.default.wrap(function _callee$(_context) {
82
82
  while (1) {
83
83
  switch (_context.prev = _context.next) {
84
84
  case 0:
@@ -88,7 +88,7 @@ var FromConfigSequenceAdapter = /*#__PURE__*/function (_FromConfigAdapter) {
88
88
  case 2:
89
89
  feats = _context.sent;
90
90
  feat = feats[0];
91
- observer.next(new _simpleFeature["default"](_objectSpread(_objectSpread({}, feat.toJSON()), {}, {
91
+ observer.next(new _simpleFeature.default(_objectSpread(_objectSpread({}, feat.toJSON()), {}, {
92
92
  uniqueId: "".concat(feat.id(), ":").concat(region.start, "-").concat(region.end),
93
93
  end: region.end,
94
94
  start: region.start,
@@ -116,10 +116,10 @@ var FromConfigSequenceAdapter = /*#__PURE__*/function (_FromConfigAdapter) {
116
116
  }, {
117
117
  key: "getRegions",
118
118
  value: function () {
119
- var _getRegions = (0, _asyncToGenerator2["default"])( /*#__PURE__*/_regenerator["default"].mark(function _callee2() {
119
+ var _getRegions = (0, _asyncToGenerator2.default)( /*#__PURE__*/_regenerator.default.mark(function _callee2() {
120
120
  var regions, _iterator, _step, _step$value, refName, features, currentRegion, _iterator2, _step2, feature;
121
121
 
122
- return _regenerator["default"].wrap(function _callee2$(_context2) {
122
+ return _regenerator.default.wrap(function _callee2$(_context2) {
123
123
  while (1) {
124
124
  switch (_context2.prev = _context2.next) {
125
125
  case 0:
@@ -129,7 +129,7 @@ var FromConfigSequenceAdapter = /*#__PURE__*/function (_FromConfigAdapter) {
129
129
 
130
130
  try {
131
131
  for (_iterator.s(); !(_step = _iterator.n()).done;) {
132
- _step$value = (0, _slicedToArray2["default"])(_step.value, 2), refName = _step$value[0], features = _step$value[1];
132
+ _step$value = (0, _slicedToArray2.default)(_step.value, 2), refName = _step$value[0], features = _step$value[1];
133
133
  currentRegion = void 0;
134
134
  _iterator2 = _createForOfIteratorHelper(features);
135
135
 
@@ -196,6 +196,6 @@ var FromConfigSequenceAdapter = /*#__PURE__*/function (_FromConfigAdapter) {
196
196
  freeResources() {}
197
197
  }]);
198
198
  return FromConfigSequenceAdapter;
199
- }(_FromConfigAdapter2["default"]);
199
+ }(_FromConfigAdapter2.default);
200
200
 
201
- exports["default"] = FromConfigSequenceAdapter;
201
+ exports.default = FromConfigSequenceAdapter;
@@ -12,9 +12,9 @@ var _FromConfigSequenceAdapter = _interopRequireDefault(require("./FromConfigSeq
12
12
 
13
13
  var _configSchema = require("./configSchema");
14
14
 
15
- test('adapter can fetch sequences when there is just one feature representing whole refseq', /*#__PURE__*/(0, _asyncToGenerator2["default"])( /*#__PURE__*/_regenerator["default"].mark(function _callee() {
15
+ test('adapter can fetch sequences when there is just one feature representing whole refseq', /*#__PURE__*/(0, _asyncToGenerator2.default)( /*#__PURE__*/_regenerator.default.mark(function _callee() {
16
16
  var features, adapter, result, featuresArray, result2, featuresArray2;
17
- return _regenerator["default"].wrap(function _callee$(_context) {
17
+ return _regenerator.default.wrap(function _callee$(_context) {
18
18
  while (1) {
19
19
  switch (_context.prev = _context.next) {
20
20
  case 0:
@@ -25,7 +25,7 @@ test('adapter can fetch sequences when there is just one feature representing wh
25
25
  end: 150,
26
26
  seq: 'ccaaaccgtcaattaaccggtatcttctcggaaacggcggttctctcctagatagcgatctgtggtctcaccatgcaatttaaacaggtgagtaaagattgctacaaatacgagactagctgtcaccagatgctgttcatctgttggctc'
27
27
  }];
28
- adapter = new _FromConfigSequenceAdapter["default"](_configSchema.sequenceConfigSchema.create({
28
+ adapter = new _FromConfigSequenceAdapter.default(_configSchema.sequenceConfigSchema.create({
29
29
  features: features
30
30
  }));
31
31
  result = adapter.getFeatures({
@@ -60,9 +60,9 @@ test('adapter can fetch sequences when there is just one feature representing wh
60
60
  }
61
61
  }, _callee);
62
62
  })));
63
- test("adapter can fetch sequences when the config's sequence doesn't start at 0", /*#__PURE__*/(0, _asyncToGenerator2["default"])( /*#__PURE__*/_regenerator["default"].mark(function _callee2() {
63
+ test("adapter can fetch sequences when the config's sequence doesn't start at 0", /*#__PURE__*/(0, _asyncToGenerator2.default)( /*#__PURE__*/_regenerator.default.mark(function _callee2() {
64
64
  var features, adapter, result, featuresArray, result2, featuresArray2;
65
- return _regenerator["default"].wrap(function _callee2$(_context2) {
65
+ return _regenerator.default.wrap(function _callee2$(_context2) {
66
66
  while (1) {
67
67
  switch (_context2.prev = _context2.next) {
68
68
  case 0:
@@ -73,7 +73,7 @@ test("adapter can fetch sequences when the config's sequence doesn't start at 0"
73
73
  end: 5150,
74
74
  seq: 'ccaaaccgtcaattaaccggtatcttctcggaaacggcggttctctcctagatagcgatctgtggtctcaccatgcaatttaaacaggtgagtaaagattgctacaaatacgagactagctgtcaccagatgctgttcatctgttggctc'
75
75
  }];
76
- adapter = new _FromConfigSequenceAdapter["default"](_configSchema.sequenceConfigSchema.create({
76
+ adapter = new _FromConfigSequenceAdapter.default(_configSchema.sequenceConfigSchema.create({
77
77
  features: features
78
78
  }));
79
79
  result = adapter.getFeatures({
@@ -8,19 +8,19 @@ Object.defineProperty(exports, "__esModule", {
8
8
  Object.defineProperty(exports, "AdapterClass", {
9
9
  enumerable: true,
10
10
  get: function get() {
11
- return _FromConfigAdapter["default"];
11
+ return _FromConfigAdapter.default;
12
12
  }
13
13
  });
14
14
  Object.defineProperty(exports, "RegionsAdapterClass", {
15
15
  enumerable: true,
16
16
  get: function get() {
17
- return _FromConfigRegionsAdapter["default"];
17
+ return _FromConfigRegionsAdapter.default;
18
18
  }
19
19
  });
20
20
  Object.defineProperty(exports, "SequenceAdapterClass", {
21
21
  enumerable: true,
22
22
  get: function get() {
23
- return _FromConfigSequenceAdapter["default"];
23
+ return _FromConfigSequenceAdapter.default;
24
24
  }
25
25
  });
26
26
  Object.defineProperty(exports, "configSchema", {
@@ -5,7 +5,7 @@ var _interopRequireDefault = require("@babel/runtime/helpers/interopRequireDefau
5
5
  Object.defineProperty(exports, "__esModule", {
6
6
  value: true
7
7
  });
8
- exports["default"] = void 0;
8
+ exports.default = void 0;
9
9
 
10
10
  var _regenerator = _interopRequireDefault(require("@babel/runtime/regenerator"));
11
11
 
@@ -29,26 +29,26 @@ var _io = require("@jbrowse/core/util/io");
29
29
 
30
30
  var _configuration = require("@jbrowse/core/configuration");
31
31
 
32
- function _createSuper(Derived) { var hasNativeReflectConstruct = _isNativeReflectConstruct(); return function _createSuperInternal() { var Super = (0, _getPrototypeOf2["default"])(Derived), result; if (hasNativeReflectConstruct) { var NewTarget = (0, _getPrototypeOf2["default"])(this).constructor; result = Reflect.construct(Super, arguments, NewTarget); } else { result = Super.apply(this, arguments); } return (0, _possibleConstructorReturn2["default"])(this, result); }; }
32
+ function _createSuper(Derived) { var hasNativeReflectConstruct = _isNativeReflectConstruct(); return function _createSuperInternal() { var Super = (0, _getPrototypeOf2.default)(Derived), result; if (hasNativeReflectConstruct) { var NewTarget = (0, _getPrototypeOf2.default)(this).constructor; result = Reflect.construct(Super, arguments, NewTarget); } else { result = Super.apply(this, arguments); } return (0, _possibleConstructorReturn2.default)(this, result); }; }
33
33
 
34
34
  function _isNativeReflectConstruct() { if (typeof Reflect === "undefined" || !Reflect.construct) return false; if (Reflect.construct.sham) return false; if (typeof Proxy === "function") return true; try { Boolean.prototype.valueOf.call(Reflect.construct(Boolean, [], function () {})); return true; } catch (e) { return false; } }
35
35
 
36
36
  var RefNameAliasAdapter = /*#__PURE__*/function (_BaseAdapter) {
37
- (0, _inherits2["default"])(RefNameAliasAdapter, _BaseAdapter);
37
+ (0, _inherits2.default)(RefNameAliasAdapter, _BaseAdapter);
38
38
 
39
39
  var _super = _createSuper(RefNameAliasAdapter);
40
40
 
41
41
  function RefNameAliasAdapter() {
42
- (0, _classCallCheck2["default"])(this, RefNameAliasAdapter);
42
+ (0, _classCallCheck2.default)(this, RefNameAliasAdapter);
43
43
  return _super.apply(this, arguments);
44
44
  }
45
45
 
46
- (0, _createClass2["default"])(RefNameAliasAdapter, [{
46
+ (0, _createClass2.default)(RefNameAliasAdapter, [{
47
47
  key: "getRefNameAliases",
48
48
  value: function () {
49
- var _getRefNameAliases = (0, _asyncToGenerator2["default"])( /*#__PURE__*/_regenerator["default"].mark(function _callee() {
49
+ var _getRefNameAliases = (0, _asyncToGenerator2.default)( /*#__PURE__*/_regenerator.default.mark(function _callee() {
50
50
  var loc, results, refColumn;
51
- return _regenerator["default"].wrap(function _callee$(_context) {
51
+ return _regenerator.default.wrap(function _callee$(_context) {
52
52
  while (1) {
53
53
  switch (_context.prev = _context.next) {
54
54
  case 0:
@@ -74,7 +74,7 @@ var RefNameAliasAdapter = /*#__PURE__*/function (_BaseAdapter) {
74
74
  var aliases = row.split('\t');
75
75
 
76
76
  var _aliases$splice = aliases.splice(refColumn, 1),
77
- _aliases$splice2 = (0, _slicedToArray2["default"])(_aliases$splice, 1),
77
+ _aliases$splice2 = (0, _slicedToArray2.default)(_aliases$splice, 1),
78
78
  refName = _aliases$splice2[0];
79
79
 
80
80
  return {
@@ -100,8 +100,8 @@ var RefNameAliasAdapter = /*#__PURE__*/function (_BaseAdapter) {
100
100
  }, {
101
101
  key: "freeResources",
102
102
  value: function () {
103
- var _freeResources = (0, _asyncToGenerator2["default"])( /*#__PURE__*/_regenerator["default"].mark(function _callee2() {
104
- return _regenerator["default"].wrap(function _callee2$(_context2) {
103
+ var _freeResources = (0, _asyncToGenerator2.default)( /*#__PURE__*/_regenerator.default.mark(function _callee2() {
104
+ return _regenerator.default.wrap(function _callee2$(_context2) {
105
105
  while (1) {
106
106
  switch (_context2.prev = _context2.next) {
107
107
  case 0:
@@ -122,4 +122,4 @@ var RefNameAliasAdapter = /*#__PURE__*/function (_BaseAdapter) {
122
122
  return RefNameAliasAdapter;
123
123
  }(_BaseAdapter2.BaseAdapter);
124
124
 
125
- exports["default"] = RefNameAliasAdapter;
125
+ exports.default = RefNameAliasAdapter;
@@ -10,13 +10,13 @@ var _RefNameAliasAdapter = _interopRequireDefault(require("./RefNameAliasAdapter
10
10
 
11
11
  var _configSchema = _interopRequireDefault(require("./configSchema"));
12
12
 
13
- test('adapter can fetch a simple alias file', /*#__PURE__*/(0, _asyncToGenerator2["default"])( /*#__PURE__*/_regenerator["default"].mark(function _callee() {
13
+ test('adapter can fetch a simple alias file', /*#__PURE__*/(0, _asyncToGenerator2.default)( /*#__PURE__*/_regenerator.default.mark(function _callee() {
14
14
  var adapter, result;
15
- return _regenerator["default"].wrap(function _callee$(_context) {
15
+ return _regenerator.default.wrap(function _callee$(_context) {
16
16
  while (1) {
17
17
  switch (_context.prev = _context.next) {
18
18
  case 0:
19
- adapter = new _RefNameAliasAdapter["default"](_configSchema["default"].create({
19
+ adapter = new _RefNameAliasAdapter.default(_configSchema.default.create({
20
20
  location: {
21
21
  localPath: require.resolve('./test_data/simple_alias.txt'),
22
22
  locationType: 'LocalPathLocation'
@@ -3,7 +3,7 @@
3
3
  Object.defineProperty(exports, "__esModule", {
4
4
  value: true
5
5
  });
6
- exports["default"] = void 0;
6
+ exports.default = void 0;
7
7
 
8
8
  var _configuration = require("@jbrowse/core/configuration");
9
9
 
@@ -23,4 +23,4 @@ var _default = (0, _configuration.ConfigurationSchema)('RefNameAliasAdapter', {
23
23
  explicitlyTyped: true
24
24
  });
25
25
 
26
- exports["default"] = _default;
26
+ exports.default = _default;
@@ -8,13 +8,13 @@ Object.defineProperty(exports, "__esModule", {
8
8
  Object.defineProperty(exports, "AdapterClass", {
9
9
  enumerable: true,
10
10
  get: function get() {
11
- return _RefNameAliasAdapter["default"];
11
+ return _RefNameAliasAdapter.default;
12
12
  }
13
13
  });
14
14
  Object.defineProperty(exports, "configSchema", {
15
15
  enumerable: true,
16
16
  get: function get() {
17
- return _configSchema["default"];
17
+ return _configSchema.default;
18
18
  }
19
19
  });
20
20
 
package/dist/index.js CHANGED
@@ -9,10 +9,10 @@ exports.ConfigurationEditor = void 0;
9
9
  Object.defineProperty(exports, "JsonEditor", {
10
10
  enumerable: true,
11
11
  get: function get() {
12
- return _JsonEditor["default"];
12
+ return _JsonEditor.default;
13
13
  }
14
14
  });
15
- exports["default"] = void 0;
15
+ exports.default = void 0;
16
16
 
17
17
  var _typeof2 = _interopRequireDefault(require("@babel/runtime/helpers/typeof"));
18
18
 
@@ -46,13 +46,13 @@ var _RefNameAliasAdapter = require("./RefNameAliasAdapter");
46
46
 
47
47
  var _JsonEditor = _interopRequireDefault(require("./ConfigurationEditorWidget/components/JsonEditor"));
48
48
 
49
- function _createSuper(Derived) { var hasNativeReflectConstruct = _isNativeReflectConstruct(); return function _createSuperInternal() { var Super = (0, _getPrototypeOf2["default"])(Derived), result; if (hasNativeReflectConstruct) { var NewTarget = (0, _getPrototypeOf2["default"])(this).constructor; result = Reflect.construct(Super, arguments, NewTarget); } else { result = Super.apply(this, arguments); } return (0, _possibleConstructorReturn2["default"])(this, result); }; }
49
+ function _createSuper(Derived) { var hasNativeReflectConstruct = _isNativeReflectConstruct(); return function _createSuperInternal() { var Super = (0, _getPrototypeOf2.default)(Derived), result; if (hasNativeReflectConstruct) { var NewTarget = (0, _getPrototypeOf2.default)(this).constructor; result = Reflect.construct(Super, arguments, NewTarget); } else { result = Super.apply(this, arguments); } return (0, _possibleConstructorReturn2.default)(this, result); }; }
50
50
 
51
51
  function _isNativeReflectConstruct() { if (typeof Reflect === "undefined" || !Reflect.construct) return false; if (Reflect.construct.sham) return false; if (typeof Proxy === "function") return true; try { Boolean.prototype.valueOf.call(Reflect.construct(Boolean, [], function () {})); return true; } catch (e) { return false; } }
52
52
 
53
53
  function _getRequireWildcardCache(nodeInterop) { if (typeof WeakMap !== "function") return null; var cacheBabelInterop = new WeakMap(); var cacheNodeInterop = new WeakMap(); return (_getRequireWildcardCache = function _getRequireWildcardCache(nodeInterop) { return nodeInterop ? cacheNodeInterop : cacheBabelInterop; })(nodeInterop); }
54
54
 
55
- function _interopRequireWildcard(obj, nodeInterop) { if (!nodeInterop && obj && obj.__esModule) { return obj; } if (obj === null || (0, _typeof2["default"])(obj) !== "object" && typeof obj !== "function") { return { "default": obj }; } var cache = _getRequireWildcardCache(nodeInterop); if (cache && cache.has(obj)) { return cache.get(obj); } var newObj = {}; var hasPropertyDescriptor = Object.defineProperty && Object.getOwnPropertyDescriptor; for (var key in obj) { if (key !== "default" && Object.prototype.hasOwnProperty.call(obj, key)) { var desc = hasPropertyDescriptor ? Object.getOwnPropertyDescriptor(obj, key) : null; if (desc && (desc.get || desc.set)) { Object.defineProperty(newObj, key, desc); } else { newObj[key] = obj[key]; } } } newObj["default"] = obj; if (cache) { cache.set(obj, newObj); } return newObj; }
55
+ function _interopRequireWildcard(obj, nodeInterop) { if (!nodeInterop && obj && obj.__esModule) { return obj; } if (obj === null || (0, _typeof2.default)(obj) !== "object" && typeof obj !== "function") { return { default: obj }; } var cache = _getRequireWildcardCache(nodeInterop); if (cache && cache.has(obj)) { return cache.get(obj); } var newObj = {}; var hasPropertyDescriptor = Object.defineProperty && Object.getOwnPropertyDescriptor; for (var key in obj) { if (key !== "default" && Object.prototype.hasOwnProperty.call(obj, key)) { var desc = hasPropertyDescriptor ? Object.getOwnPropertyDescriptor(obj, key) : null; if (desc && (desc.get || desc.set)) { Object.defineProperty(newObj, key, desc); } else { newObj[key] = obj[key]; } } } newObj.default = obj; if (cache) { cache.set(obj, newObj); } return newObj; }
56
56
 
57
57
  var ConfigurationEditorComponent = /*#__PURE__*/(0, _react.lazy)(function () {
58
58
  return Promise.resolve().then(function () {
@@ -62,29 +62,29 @@ var ConfigurationEditorComponent = /*#__PURE__*/(0, _react.lazy)(function () {
62
62
  exports.ConfigurationEditor = ConfigurationEditorComponent;
63
63
 
64
64
  var _default = /*#__PURE__*/function (_Plugin) {
65
- (0, _inherits2["default"])(_default, _Plugin);
65
+ (0, _inherits2.default)(_default, _Plugin);
66
66
 
67
67
  var _super = _createSuper(_default);
68
68
 
69
69
  function _default() {
70
70
  var _this;
71
71
 
72
- (0, _classCallCheck2["default"])(this, _default);
72
+ (0, _classCallCheck2.default)(this, _default);
73
73
 
74
74
  for (var _len = arguments.length, args = new Array(_len), _key = 0; _key < _len; _key++) {
75
75
  args[_key] = arguments[_key];
76
76
  }
77
77
 
78
78
  _this = _super.call.apply(_super, [this].concat(args));
79
- (0, _defineProperty2["default"])((0, _assertThisInitialized2["default"])(_this), "name", 'ConfigurationPlugin');
79
+ (0, _defineProperty2.default)((0, _assertThisInitialized2.default)(_this), "name", 'ConfigurationPlugin');
80
80
  return _this;
81
81
  }
82
82
 
83
- (0, _createClass2["default"])(_default, [{
83
+ (0, _createClass2.default)(_default, [{
84
84
  key: "install",
85
85
  value: function install(pluginManager) {
86
86
  pluginManager.addAdapterType(function () {
87
- return new _AdapterType["default"]({
87
+ return new _AdapterType.default({
88
88
  name: 'FromConfigAdapter',
89
89
  configSchema: _FromConfigAdapter.configSchema,
90
90
  AdapterClass: _FromConfigAdapter.AdapterClass,
@@ -97,7 +97,7 @@ var _default = /*#__PURE__*/function (_Plugin) {
97
97
  });
98
98
  });
99
99
  pluginManager.addAdapterType(function () {
100
- return new _AdapterType["default"]({
100
+ return new _AdapterType.default({
101
101
  name: 'FromConfigRegionsAdapter',
102
102
  configSchema: _FromConfigAdapter.regionsConfigSchema,
103
103
  AdapterClass: _FromConfigAdapter.RegionsAdapterClass,
@@ -110,7 +110,7 @@ var _default = /*#__PURE__*/function (_Plugin) {
110
110
  });
111
111
  });
112
112
  pluginManager.addAdapterType(function () {
113
- return new _AdapterType["default"]({
113
+ return new _AdapterType.default({
114
114
  name: 'FromConfigSequenceAdapter',
115
115
  configSchema: _FromConfigAdapter.sequenceConfigSchema,
116
116
  AdapterClass: _FromConfigAdapter.SequenceAdapterClass,
@@ -123,7 +123,7 @@ var _default = /*#__PURE__*/function (_Plugin) {
123
123
  });
124
124
  });
125
125
  pluginManager.addAdapterType(function () {
126
- return new _AdapterType["default"]({
126
+ return new _AdapterType.default({
127
127
  name: 'RefNameAliasAdapter',
128
128
  configSchema: _RefNameAliasAdapter.configSchema,
129
129
  AdapterClass: _RefNameAliasAdapter.AdapterClass,
@@ -136,7 +136,7 @@ var _default = /*#__PURE__*/function (_Plugin) {
136
136
  });
137
137
  });
138
138
  pluginManager.addWidgetType(function () {
139
- return new _WidgetType["default"]({
139
+ return new _WidgetType.default({
140
140
  name: 'ConfigurationEditorWidget',
141
141
  HeadingComponent: _ConfigurationEditorWidget.HeadingComponent,
142
142
  configSchema: _ConfigurationEditorWidget.configSchema,
@@ -147,6 +147,6 @@ var _default = /*#__PURE__*/function (_Plugin) {
147
147
  }
148
148
  }]);
149
149
  return _default;
150
- }(_Plugin2["default"]);
150
+ }(_Plugin2.default);
151
151
 
152
- exports["default"] = _default;
152
+ exports.default = _default;
@@ -13,14 +13,14 @@ describe('Config editing', function () {
13
13
  beforeAll(function () {
14
14
  var originalConsoleWarn = console.warn;
15
15
  console.warn = jest.fn();
16
- pluginManager = new _PluginManager["default"]([new _["default"]()]);
16
+ pluginManager = new _PluginManager.default([new _.default()]);
17
17
  pluginManager.createPluggableElements();
18
18
  pluginManager.configure();
19
19
  console.warn = originalConsoleWarn;
20
20
  });
21
21
  it("won't add if already added", function () {
22
22
  expect(function () {
23
- return pluginManager.addPlugin(new _["default"]());
23
+ return pluginManager.addPlugin(new _.default());
24
24
  }).toThrow(/JBrowse already configured, cannot add plugins/);
25
25
  });
26
26
  it('adds config editor widget', function () {
package/package.json CHANGED
@@ -1,6 +1,6 @@
1
1
  {
2
2
  "name": "@jbrowse/plugin-config",
3
- "version": "1.7.3",
3
+ "version": "1.7.6",
4
4
  "description": "JBrowse 2 config utilities",
5
5
  "keywords": [
6
6
  "jbrowse",
@@ -33,8 +33,8 @@
33
33
  "postbuild": "tsc --build tsconfig.build.json"
34
34
  },
35
35
  "dependencies": {
36
+ "@babel/runtime": "^7.17.9",
36
37
  "@material-ui/icons": "^4.9.1",
37
- "generic-filehandle": "^2.2.2",
38
38
  "pluralize": "^8.0.0",
39
39
  "react-color": "^2.19.3",
40
40
  "react-simple-code-editor": "0.9.3",
@@ -53,5 +53,5 @@
53
53
  "publishConfig": {
54
54
  "access": "public"
55
55
  },
56
- "gitHead": "09b13c85acf4ac68dd71ab23af87656c7552fdaf"
56
+ "gitHead": "dbd73f99714e395cf20877d5e05d26855857a0e3"
57
57
  }