@jbrowse/plugin-comparative-adapters 4.1.3 → 4.1.5

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Files changed (9) hide show
  1. package/esm/BlastTabularAdapter/configSchema.d.ts +2 -2
  2. package/esm/ChainAdapter/configSchema.d.ts +2 -2
  3. package/esm/DeltaAdapter/configSchema.d.ts +2 -2
  4. package/esm/MCScanAnchorsAdapter/configSchema.d.ts +2 -2
  5. package/esm/MCScanSimpleAnchorsAdapter/configSchema.d.ts +2 -2
  6. package/esm/MashMapAdapter/configSchema.d.ts +2 -2
  7. package/esm/PAFAdapter/configSchema.d.ts +2 -2
  8. package/esm/PairwiseIndexedPAFAdapter/configSchema.d.ts +4 -4
  9. package/package.json +4 -4
package/esm/BlastTabularAdapter/configSchema.d.ts CHANGED
@@ -1,4 +1,4 @@
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- declare const BlastTabularAdapter: import("node_modules/@jbrowse/core/src/configuration/configurationSchema").ConfigurationSchemaType<{
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+ declare const BlastTabularAdapter: import("@jbrowse/core/configuration/configurationSchema").ConfigurationSchemaType<{
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  assemblyNames: {
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  type: string;
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  defaultValue: never[];
@@ -26,5 +26,5 @@ declare const BlastTabularAdapter: import("node_modules/@jbrowse/core/src/config
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  description: string;
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  defaultValue: string;
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  };
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- }, import("node_modules/@jbrowse/core/src/configuration/configurationSchema").ConfigurationSchemaOptions<undefined, undefined>>;
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+ }, import("@jbrowse/core/configuration/configurationSchema").ConfigurationSchemaOptions<undefined, undefined>>;
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  export default BlastTabularAdapter;
package/esm/ChainAdapter/configSchema.d.ts CHANGED
@@ -1,4 +1,4 @@
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- declare const ChainAdapter: import("node_modules/@jbrowse/core/src/configuration/configurationSchema").ConfigurationSchemaType<{
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+ declare const ChainAdapter: import("@jbrowse/core/configuration/configurationSchema").ConfigurationSchemaType<{
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  assemblyNames: {
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  type: string;
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  defaultValue: never[];
@@ -21,5 +21,5 @@ declare const ChainAdapter: import("node_modules/@jbrowse/core/src/configuration
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  locationType: string;
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  };
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  };
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- }, import("node_modules/@jbrowse/core/src/configuration/configurationSchema").ConfigurationSchemaOptions<undefined, undefined>>;
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+ }, import("@jbrowse/core/configuration/configurationSchema").ConfigurationSchemaOptions<undefined, undefined>>;
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  export default ChainAdapter;
package/esm/DeltaAdapter/configSchema.d.ts CHANGED
@@ -1,4 +1,4 @@
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- declare const DeltaAdapter: import("node_modules/@jbrowse/core/src/configuration/configurationSchema").ConfigurationSchemaType<{
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+ declare const DeltaAdapter: import("@jbrowse/core/configuration/configurationSchema").ConfigurationSchemaType<{
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  assemblyNames: {
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  type: string;
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  defaultValue: never[];
@@ -21,5 +21,5 @@ declare const DeltaAdapter: import("node_modules/@jbrowse/core/src/configuration
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  locationType: string;
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  };
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  };
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- }, import("node_modules/@jbrowse/core/src/configuration/configurationSchema").ConfigurationSchemaOptions<undefined, undefined>>;
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+ }, import("@jbrowse/core/configuration/configurationSchema").ConfigurationSchemaOptions<undefined, undefined>>;
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  export default DeltaAdapter;
package/esm/MCScanAnchorsAdapter/configSchema.d.ts CHANGED
@@ -1,4 +1,4 @@
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- declare const MCScanAnchorsAdapter: import("node_modules/@jbrowse/core/src/configuration/configurationSchema").ConfigurationSchemaType<{
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+ declare const MCScanAnchorsAdapter: import("@jbrowse/core/configuration/configurationSchema").ConfigurationSchemaType<{
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  mcscanAnchorsLocation: {
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  type: string;
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  defaultValue: {
@@ -24,5 +24,5 @@ declare const MCScanAnchorsAdapter: import("node_modules/@jbrowse/core/src/confi
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  type: string;
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  defaultValue: never[];
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  };
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- }, import("node_modules/@jbrowse/core/src/configuration/configurationSchema").ConfigurationSchemaOptions<undefined, undefined>>;
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+ }, import("@jbrowse/core/configuration/configurationSchema").ConfigurationSchemaOptions<undefined, undefined>>;
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  export default MCScanAnchorsAdapter;
package/esm/MCScanSimpleAnchorsAdapter/configSchema.d.ts CHANGED
@@ -1,4 +1,4 @@
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- declare const MCScanSimpleAnchorsAdapter: import("node_modules/@jbrowse/core/src/configuration/configurationSchema").ConfigurationSchemaType<{
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+ declare const MCScanSimpleAnchorsAdapter: import("@jbrowse/core/configuration/configurationSchema").ConfigurationSchemaType<{
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  mcscanSimpleAnchorsLocation: {
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  type: string;
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  defaultValue: {
@@ -24,5 +24,5 @@ declare const MCScanSimpleAnchorsAdapter: import("node_modules/@jbrowse/core/src
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  type: string;
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  defaultValue: never[];
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  };
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- }, import("node_modules/@jbrowse/core/src/configuration/configurationSchema").ConfigurationSchemaOptions<undefined, undefined>>;
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+ }, import("@jbrowse/core/configuration/configurationSchema").ConfigurationSchemaOptions<undefined, undefined>>;
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  export default MCScanSimpleAnchorsAdapter;
package/esm/MashMapAdapter/configSchema.d.ts CHANGED
@@ -1,4 +1,4 @@
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- declare const MashMapAdapter: import("node_modules/@jbrowse/core/src/configuration/configurationSchema").ConfigurationSchemaType<{
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+ declare const MashMapAdapter: import("@jbrowse/core/configuration/configurationSchema").ConfigurationSchemaType<{
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  assemblyNames: {
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  type: string;
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  defaultValue: never[];
@@ -21,5 +21,5 @@ declare const MashMapAdapter: import("node_modules/@jbrowse/core/src/configurati
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  locationType: string;
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  };
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  };
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- }, import("node_modules/@jbrowse/core/src/configuration/configurationSchema").ConfigurationSchemaOptions<undefined, undefined>>;
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+ }, import("@jbrowse/core/configuration/configurationSchema").ConfigurationSchemaOptions<undefined, undefined>>;
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  export default MashMapAdapter;
package/esm/PAFAdapter/configSchema.d.ts CHANGED
@@ -1,4 +1,4 @@
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- declare const PAFAdapter: import("node_modules/@jbrowse/core/src/configuration/configurationSchema").ConfigurationSchemaType<{
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+ declare const PAFAdapter: import("@jbrowse/core/configuration/configurationSchema").ConfigurationSchemaType<{
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  assemblyNames: {
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  type: string;
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  defaultValue: never[];
@@ -21,5 +21,5 @@ declare const PAFAdapter: import("node_modules/@jbrowse/core/src/configuration/c
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  locationType: string;
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  };
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  };
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- }, import("node_modules/@jbrowse/core/src/configuration/configurationSchema").ConfigurationSchemaOptions<undefined, undefined>>;
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+ }, import("@jbrowse/core/configuration/configurationSchema").ConfigurationSchemaOptions<undefined, undefined>>;
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  export default PAFAdapter;
package/esm/PairwiseIndexedPAFAdapter/configSchema.d.ts CHANGED
@@ -1,4 +1,4 @@
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- declare const PairwiseIndexedPAFAdapter: import("node_modules/@jbrowse/core/src/configuration/configurationSchema").ConfigurationSchemaType<{
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+ declare const PairwiseIndexedPAFAdapter: import("@jbrowse/core/configuration/configurationSchema").ConfigurationSchemaType<{
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  assemblyNames: {
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  type: string;
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  defaultValue: never[];
@@ -22,7 +22,7 @@ declare const PairwiseIndexedPAFAdapter: import("node_modules/@jbrowse/core/src/
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  locationType: string;
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  };
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  };
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- index: import("node_modules/@jbrowse/core/src/configuration/configurationSchema").ConfigurationSchemaType<{
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+ index: import("@jbrowse/core/configuration/configurationSchema").ConfigurationSchemaType<{
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  indexType: {
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  model: import("@jbrowse/mobx-state-tree").ISimpleType<string>;
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  type: string;
@@ -35,6 +35,6 @@ declare const PairwiseIndexedPAFAdapter: import("node_modules/@jbrowse/core/src/
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  locationType: string;
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  };
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  };
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- }, import("node_modules/@jbrowse/core/src/configuration/configurationSchema").ConfigurationSchemaOptions<undefined, undefined>>;
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- }, import("node_modules/@jbrowse/core/src/configuration/configurationSchema").ConfigurationSchemaOptions<undefined, undefined>>;
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+ }, import("@jbrowse/core/configuration/configurationSchema").ConfigurationSchemaOptions<undefined, undefined>>;
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+ }, import("@jbrowse/core/configuration/configurationSchema").ConfigurationSchemaOptions<undefined, undefined>>;
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  export default PairwiseIndexedPAFAdapter;
package/package.json CHANGED
@@ -1,6 +1,6 @@
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  {
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  "name": "@jbrowse/plugin-comparative-adapters",
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- "version": "4.1.3",
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+ "version": "4.1.5",
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  "type": "module",
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  "description": "JBrowse 2 comparative adapters",
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  "keywords": [
@@ -23,13 +23,13 @@
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  "dependencies": {
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  "@gmod/tabix": "^3.2.2",
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  "@jbrowse/mobx-state-tree": "^5.5.0",
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- "@mui/material": "^7.3.7",
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+ "@mui/material": "^7.3.8",
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  "generic-filehandle2": "^2.0.18",
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  "mobx": "^6.15.0",
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  "mobx-react": "^9.2.1",
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  "rxjs": "^7.8.2",
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- "@jbrowse/plugin-alignments": "^4.1.3",
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- "@jbrowse/core": "^4.1.3"
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+ "@jbrowse/core": "^4.1.5",
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+ "@jbrowse/plugin-alignments": "^4.1.5"
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  },
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  "peerDependencies": {
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  "react": ">=18.0.0",