@jbrowse/plugin-circular-view 2.1.5 → 2.1.6
This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
- package/dist/BaseChordDisplay/models/BaseChordDisplayModel.d.ts +3 -6
- package/dist/BaseChordDisplay/models/BaseChordDisplayModel.js +2 -2
- package/dist/BaseChordDisplay/models/BaseChordDisplayModel.js.map +1 -1
- package/esm/BaseChordDisplay/models/BaseChordDisplayModel.d.ts +3 -6
- package/esm/BaseChordDisplay/models/BaseChordDisplayModel.js +2 -2
- package/esm/BaseChordDisplay/models/BaseChordDisplayModel.js.map +1 -1
- package/package.json +2 -2
- package/src/BaseChordDisplay/models/BaseChordDisplayModel.ts +2 -1
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@@ -52,13 +52,10 @@ export declare const BaseChordDisplayModel: import("mobx-state-tree").IModelType
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readonly adapterConfig: any;
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readonly parentTrack: any;
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renderProps(): any;
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readonly rendererType:
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readonly rendererType: RendererType;
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readonly DisplayMessageComponent: React.FC<any> | undefined;
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trackMenuItems(): import("@jbrowse/core/ui").MenuItem[];
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readonly viewMenuActions: import("@jbrowse/core/ui").MenuItem[];
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* the pluggable element type object for this diplay's
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* renderer
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*/
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readonly viewMenuActions: import("@jbrowse/core/ui").MenuItem[];
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regionCannotBeRendered(): undefined;
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} & {
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setError(error?: unknown): void;
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@@ -80,7 +77,7 @@ export declare const BaseChordDisplayModel: import("mobx-state-tree").IModelType
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* the pluggable element type object for this diplay's
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* renderer
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*/
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readonly rendererType:
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readonly rendererType: RendererType;
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isCompatibleWithRenderer(renderer: RendererType): boolean;
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/**
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* returns a string feature ID if the globally-selected object
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@@ -30,7 +30,7 @@ exports.BaseChordDisplayModel = mobx_state_tree_1.types
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};
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})
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.actions(self => {
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const { pluginManager } = (0,
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const { pluginManager } = (0, util_1.getEnv)(self);
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const track = self;
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return {
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onChordClick(feature) {
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@@ -79,7 +79,7 @@ exports.BaseChordDisplayModel = mobx_state_tree_1.types
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*/
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get rendererType() {
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const display = self;
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const { pluginManager } = (0,
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const { pluginManager } = (0, util_1.getEnv)(self);
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const ThisRendererType = pluginManager.getRendererType(self.rendererTypeName);
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if (!ThisRendererType) {
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throw new Error(`renderer "${display.rendererTypeName}" not found`);
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@@ -1 +1 @@
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-
{"version":3,"file":"BaseChordDisplayModel.js","sourceRoot":"","sources":["../../../src/BaseChordDisplay/models/BaseChordDisplayModel.ts"],"names":[],"mappings":";;;;;;AACA,+DAAqD;AACrD,uEAAwE;AACxE,wIAA+G;AAE/G,
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{"version":3,"file":"BaseChordDisplayModel.js","sourceRoot":"","sources":["../../../src/BaseChordDisplay/models/BaseChordDisplayModel.ts"],"names":[],"mappings":";;;;;;AACA,+DAAqD;AACrD,uEAAwE;AACxE,wIAA+G;AAE/G,6CAM2B;AAC3B,oEAAqE;AACrE,sDAIkC;AAElC,qDAA2D;AAC3D,qDAA2E;AAG9D,QAAA,qBAAqB,GAAG,uBAAK;KACvC,OAAO,CACN,kBAAkB,EAClB,oBAAW,EACX,uBAAK,CAAC,KAAK,CAAC;IACV,iBAAiB,EAAE,GAAG;IACtB,YAAY,EAAE,uBAAK,CAAC,KAAK,CAAC,uBAAK,CAAC,MAAM,CAAC;CACxC,CAAC,CACH;KACA,QAAQ,CAAC,GAAG,EAAE;IACb,OAAO;QACL,4DAA4D;QAC5D,8BAA8B;QAC9B,MAAM,EAAE,KAAK;QACb,YAAY,EAAE,SAA2C;QACzD,IAAI,EAAE,SAAS;QACf,OAAO,EAAE,EAAE;QACX,kBAAkB,EAAE,SAA8C;QAClE,UAAU,EAAE,SAA+C;KAC5D,CAAA;AACH,CAAC,CAAC;KACD,OAAO,CAAC,IAAI,CAAC,EAAE;IACd,MAAM,EAAE,aAAa,EAAE,GAAG,IAAA,aAAM,EAAC,IAAI,CAAC,CAAA;IACtC,MAAM,KAAK,GAAG,IAAI,CAAA;IAClB,OAAO;QACL,YAAY,CAAC,OAAgB;YAC3B,IAAA,uBAAO,EAAC,IAAI,EAAE,cAAc,EAAE,EAAE,OAAO,EAAE,KAAK,EAAE,aAAa,EAAE,CAAC,CAAA;QAClE,CAAC;KACF,CAAA;AACH,CAAC,CAAC;KACD,KAAK,CAAC,IAAI,CAAC,EAAE,CAAC,CAAC;IACd,IAAI,gBAAgB;QAClB,MAAM,UAAU,GAAI,IAAA,wBAAiB,EAAC,IAAI,CAAuB;aAC9D,YAAY,CAAA;QACf,IAAI,CAAC,IAAI,CAAC,UAAU,EAAE;YACpB,OAAO,UAAU,CAAA;SAClB;QAED,MAAM,MAAM,GAAG,IAAI,CAAC,KAAK,CAAC,IAAI,CAAC,SAAS,CAAC,UAAU,CAAC,CAAC,CAAA;QAErD,8DAA8D;QAC9D,MAAM,CAAC,OAAO,CAAC,CAAC,KAAU,EAAE,EAAE;YAC5B,MAAM,OAAO,GAAG,KAAK,CAAC,MAAM,CAAC,MAAM;gBACjC,CAAC,CAAC,KAAK,CAAC,MAAM,CAAC,OAAO;gBACtB,CAAC,CAAC,CAAC,KAAK,CAAC,MAAM,CAAC,CAAA;YAClB,OAAO,CAAC,OAAO,CAAC,CAAC,MAAc,EAAE,EAAE;;gBACjC,MAAM,OAAO,GAAG,MAAA,IAAI,CAAC,UAAU,0CAAG,MAAM,CAAC,OAAO,CAAC,CAAA;gBACjD,IAAI,OAAO,IAAI,MAAM,CAAC,OAAO,KAAK,OAAO,EAAE;oBACzC,MAAM,CAAC,OAAO,GAAG,OAAO,CAAA;iBACzB;YACH,CAAC,CAAC,CAAA;QACJ,CAAC,CAAC,CAAA;QACF,OAAO,MAAM,CAAA;IACf,CAAC;IAED,WAAW;QACT,MAAM,IAAI,GAAG,IAAA,wBAAiB,EAAC,IAAI,CAAsB,CAAA;QACzD,OAAO;YACL,GAAG,IAAA,6BAAoB,EAAC,IAAI,CAAC;YAC7B,aAAa,EAAE,IAAI,CAAC,aAAa;YACjC,YAAY,EAAE,IAAI;YAClB,YAAY,EAAE,IAAI,CAAC,QAAQ,GAAG,IAAI,CAAC,iBAAiB;YACpD,MAAM,EAAE,IAAI,CAAC,QAAQ;YACrB,gBAAgB,EAAE,IAAI,CAAC,gBAAgB;YACvC,YAAY,EAAE,IAAI,CAAC,YAAY;SAChC,CAAA;IACH,CAAC;IAED;;;OAGG;IACH,IAAI,YAAY;QACd,MAAM,OAAO,GAAG,IAAI,CAAA;QACpB,MAAM,EAAE,aAAa,EAAE,GAAG,IAAA,aAAM,EAAC,IAAI,CAAC,CAAA;QACtC,MAAM,gBAAgB,GAAG,aAAa,CAAC,eAAe,CACpD,IAAI,CAAC,gBAAgB,CACtB,CAAA;QACD,IAAI,CAAC,gBAAgB,EAAE;YACrB,MAAM,IAAI,KAAK,CAAC,aAAa,OAAO,CAAC,gBAAgB,aAAa,CAAC,CAAA;SACpE;QACD,IAAI,CAAC,gBAAgB,CAAC,cAAc,EAAE;YACpC,MAAM,IAAI,KAAK,CACb,YAAY,OAAO,CAAC,gBAAgB,kEAAkE,CACvG,CAAA;SACF;QACD,OAAO,gBAAgB,CAAA;IACzB,CAAC;IAED,wBAAwB,CAAC,QAAsB;QAC7C,OAAO,CAAC,CAAC,CAAC,QAAQ,YAAY,mCAAyB,CAAC,CAAA;IAC1D,CAAC;IAED;;;OAGG;IACH,IAAI,iBAAiB;QACnB,IAAI,CAAC,IAAA,yBAAO,EAAC,IAAI,CAAC,EAAE;YAClB,OAAO,SAAS,CAAA;SACjB;QACD,MAAM,OAAO,GAAG,IAAA,iBAAU,EAAC,IAAI,CAAC,CAAA;QAChC,IAAI,CAAC,OAAO,EAAE;YACZ,OAAO,SAAS,CAAA;SACjB;QACD,MAAM,EAAE,SAAS,EAAE,GAAG,OAAO,CAAA;QAC7B,gCAAgC;QAChC,IAAI,IAAA,yBAAS,EAAC,SAAS,CAAC,EAAE;YACxB,OAAO,SAAS,CAAC,EAAE,EAAE,CAAA;SACtB;QACD,OAAO,SAAS,CAAA;IAClB,CAAC;CACF,CAAC,CAAC;KACF,OAAO,CAAC,IAAI,CAAC,EAAE,CAAC,CAAC;IAChB,aAAa;QACX,IAAI,CAAC,MAAM,GAAG,KAAK,CAAA;QACnB,IAAI,CAAC,OAAO,GAAG,EAAE,CAAA;QACjB,IAAI,CAAC,YAAY,GAAG,SAAS,CAAA;QAC7B,IAAI,CAAC,IAAI,GAAG,SAAS,CAAA;QACrB,IAAI,CAAC,KAAK,GAAG,SAAS,CAAA;QACtB,IAAI,CAAC,kBAAkB,GAAG,SAAS,CAAA;IACrC,CAAC;IACD,aAAa,CAAC,EACZ,OAAO,EACP,IAAI,EACJ,YAAY,EACZ,kBAAkB,GAOnB;QACC,IAAI,OAAO,EAAE;YACX,IAAI,CAAC,MAAM,GAAG,KAAK,CAAA;YACnB,IAAI,CAAC,OAAO,GAAG,OAAO,CAAA;YACtB,IAAI,CAAC,YAAY,GAAG,SAAS,CAAA;YAC7B,IAAI,CAAC,IAAI,GAAG,SAAS,CAAA;YACrB,IAAI,CAAC,KAAK,GAAG,SAAS,CAAA;YACtB,IAAI,CAAC,kBAAkB,GAAG,SAAS,CAAA;SACpC;aAAM;YACL,IAAI,CAAC,MAAM,GAAG,IAAI,CAAA;YAClB,IAAI,CAAC,OAAO,GAAG,EAAE,CAAA;YACjB,IAAI,CAAC,YAAY,GAAG,YAAY,CAAA;YAChC,IAAI,CAAC,IAAI,GAAG,IAAI,CAAA;YAChB,IAAI,CAAC,KAAK,GAAG,SAAS,CAAA;YACtB,IAAI,CAAC,kBAAkB,GAAG,kBAAkB,CAAA;SAC7C;IACH,CAAC;IACD,WAAW,CAAC,KAAc;QACxB,OAAO,CAAC,KAAK,CAAC,KAAK,CAAC,CAAA;QACpB,uCAAuC;QACvC,IAAI,CAAC,MAAM,GAAG,KAAK,CAAA;QACnB,IAAI,CAAC,OAAO,GAAG,EAAE,CAAA;QACjB,IAAI,CAAC,YAAY,GAAG,SAAS,CAAA;QAC7B,IAAI,CAAC,IAAI,GAAG,SAAS,CAAA;QACrB,IAAI,CAAC,KAAK,GAAG,KAAK,CAAA;QAClB,IAAI,CAAC,kBAAkB,GAAG,SAAS,CAAA;IACrC,CAAC;IAED,aAAa,CAAC,UAAkC;QAC9C,IAAI,CAAC,UAAU,GAAG,UAAU,CAAA;IAC9B,CAAC;CACF,CAAC,CAAC;KACF,OAAO,CAAC,IAAI,CAAC,EAAE,CAAC,CAAC;IAChB,WAAW;QACT,IAAA,4BAAqB,EACnB,IAAI,EACJ,mCAAkB;QAElB,aAAa;QACb,qCAAoB,EACpB;YACE,IAAI,EAAE,GAAG,IAAI,CAAC,IAAI,IAAI,IAAI,CAAC,EAAE,YAAY;YACzC,kCAAkC;YAClC,eAAe,EAAE,IAAI;SACtB,EACD,IAAI,CAAC,aAAa,EAClB,IAAI,CAAC,aAAa,EAClB,IAAI,CAAC,WAAW,CACjB,CAAA;QACD,IAAA,4BAAqB,EACnB,IAAI,EACJ,GAAG,EAAE,CAAC,CAAC;YACL,aAAa,EAAE,IAAA,8BAAqB,EAAC,IAAI,CAAC,WAAW,CAAa;YAClE,8DAA8D;YAC9D,OAAO,EAAE,IAAA,uBAAO,EAAC,IAAA,2BAAS,EAAM,IAAI,EAAE,CAAC,CAAC,EAAE,SAAS,CAAC;YACpD,eAAe,EAAE,IAAA,iBAAU,EAAC,IAAI,CAAC,CAAC,eAAe;SAClD,CAAC;QACF,8DAA8D;QAC9D,KAAK,EAAE,EAAE,aAAa,EAAE,OAAO,EAAE,eAAe,EAAO,EAAE,MAAM,EAAE,EAAE;YACjE,OAAO,eAAe,CAAC,uBAAuB,CAC5C,OAAO,EACP,aAAa,CAAC,CAAC,CAAC,EAChB,EAAE,MAAM,EAAE,SAAS,EAAE,IAAA,wBAAe,EAAC,IAAI,CAAC,EAAE,CAC7C,CAAA;QACH,CAAC,EACD;YACE,IAAI,EAAE,GAAG,IAAI,CAAC,IAAI,IAAI,IAAI,CAAC,EAAE,mBAAmB;YAChD,eAAe,EAAE,IAAI;SACtB,EACD,GAAG,EAAE,GAAE,CAAC,EACR,UAAU,CAAC,EAAE;YACX,IAAI,CAAC,aAAa,CAAC,UAAU,CAAC,CAAA;QAChC,CAAC,EACD,KAAK,CAAC,EAAE;YACN,OAAO,CAAC,KAAK,CAAC,KAAK,CAAC,CAAA;YACpB,IAAI,CAAC,QAAQ,CAAC,KAAK,CAAC,CAAA;QACtB,CAAC,CACF,CAAA;IACH,CAAC;CACF,CAAC,CAAC,CAAA"}
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@@ -52,13 +52,10 @@ export declare const BaseChordDisplayModel: import("mobx-state-tree").IModelType
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readonly adapterConfig: any;
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readonly parentTrack: any;
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renderProps(): any;
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readonly rendererType:
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readonly rendererType: RendererType;
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readonly DisplayMessageComponent: React.FC<any> | undefined;
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trackMenuItems(): import("@jbrowse/core/ui").MenuItem[];
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readonly viewMenuActions: import("@jbrowse/core/ui").MenuItem[];
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* the pluggable element type object for this diplay's
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* renderer
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*/
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readonly viewMenuActions: import("@jbrowse/core/ui").MenuItem[];
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regionCannotBeRendered(): undefined;
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} & {
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setError(error?: unknown): void;
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@@ -80,7 +77,7 @@ export declare const BaseChordDisplayModel: import("mobx-state-tree").IModelType
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* renderer
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*/
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readonly rendererType:
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readonly rendererType: RendererType;
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isCompatibleWithRenderer(renderer: RendererType): boolean;
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/**
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@@ -1,10 +1,10 @@
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import { getConf } from '@jbrowse/core/configuration';
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import { BaseDisplay } from '@jbrowse/core/pluggableElementTypes/models';
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import CircularChordRendererType from '@jbrowse/core/pluggableElementTypes/renderers/CircularChordRendererType';
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import { getContainingView, getSession, makeAbortableReaction, } from '@jbrowse/core/util';
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import { getContainingView, getSession, getEnv, makeAbortableReaction, } from '@jbrowse/core/util';
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import { isFeature } from '@jbrowse/core/util/simpleFeature';
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import { getParentRenderProps, getRpcSessionId, getTrackAssemblyNames, } from '@jbrowse/core/util/tracks';
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import { getParent, isAlive, types
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import { getParent, isAlive, types } from 'mobx-state-tree';
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import { renderReactionData, renderReactionEffect } from './renderReaction';
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export const BaseChordDisplayModel = types
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.compose('BaseChordDisplay', BaseDisplay, types.model({
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{"version":3,"file":"BaseChordDisplayModel.js","sourceRoot":"","sources":["../../../src/BaseChordDisplay/models/BaseChordDisplayModel.ts"],"names":[],"mappings":"AACA,OAAO,EAAE,OAAO,EAAE,MAAM,6BAA6B,CAAA;AACrD,OAAO,EAAE,WAAW,EAAE,MAAM,4CAA4C,CAAA;AACxE,OAAO,yBAAyB,MAAM,yEAAyE,CAAA;AAE/G,OAAO,EACL,iBAAiB,EACjB,UAAU,EACV,qBAAqB,GAEtB,MAAM,oBAAoB,CAAA;AAC3B,OAAO,EAAW,SAAS,EAAE,MAAM,kCAAkC,CAAA;AACrE,OAAO,EACL,oBAAoB,EACpB,eAAe,EACf,qBAAqB,GACtB,MAAM,2BAA2B,CAAA;AAElC,OAAO,EAAE,SAAS,EAAE,OAAO,EAAE,KAAK,EAAE,MAAM,
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+
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|
package/package.json
CHANGED
|
@@ -1,6 +1,6 @@
|
|
|
1
1
|
{
|
|
2
2
|
"name": "@jbrowse/plugin-circular-view",
|
|
3
|
-
"version": "2.1.
|
|
3
|
+
"version": "2.1.6",
|
|
4
4
|
"description": "JBrowse 2 circular view",
|
|
5
5
|
"keywords": [
|
|
6
6
|
"jbrowse",
|
|
@@ -55,5 +55,5 @@
|
|
|
55
55
|
"distModule": "esm/index.js",
|
|
56
56
|
"srcModule": "src/index.ts",
|
|
57
57
|
"module": "esm/index.js",
|
|
58
|
-
"gitHead": "
|
|
58
|
+
"gitHead": "df810d2a4f057adcd8f5345d54972508fba007a7"
|
|
59
59
|
}
|
|
@@ -6,6 +6,7 @@ import RendererType from '@jbrowse/core/pluggableElementTypes/renderers/Renderer
|
|
|
6
6
|
import {
|
|
7
7
|
getContainingView,
|
|
8
8
|
getSession,
|
|
9
|
+
getEnv,
|
|
9
10
|
makeAbortableReaction,
|
|
10
11
|
AnyReactComponentType,
|
|
11
12
|
} from '@jbrowse/core/util'
|
|
@@ -16,7 +17,7 @@ import {
|
|
|
16
17
|
getTrackAssemblyNames,
|
|
17
18
|
} from '@jbrowse/core/util/tracks'
|
|
18
19
|
import { Region } from '@jbrowse/core/util/types'
|
|
19
|
-
import { getParent, isAlive, types
|
|
20
|
+
import { getParent, isAlive, types } from 'mobx-state-tree'
|
|
20
21
|
import { renderReactionData, renderReactionEffect } from './renderReaction'
|
|
21
22
|
import { CircularViewModel } from '../../CircularView/models/CircularView'
|
|
22
23
|
|