@jbrowse/plugin-circular-view 1.7.0 → 1.7.1

This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
@@ -1,9 +1,9 @@
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- /// <reference types="react" />
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- import PluginManager from '@jbrowse/core/PluginManager';
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- declare const _default: ({ lib, load }: PluginManager) => {
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- ({ display }: any): JSX.Element;
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- propTypes: {
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- display: import("prop-types").Validator<any>;
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- };
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- };
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- export default _default;
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+ /// <reference types="react" />
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+ import PluginManager from '@jbrowse/core/PluginManager';
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+ declare const _default: ({ lib, load }: PluginManager) => {
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+ ({ display }: any): JSX.Element;
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+ propTypes: {
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+ display: import("prop-types").Validator<any>;
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+ };
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+ };
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+ export default _default;
@@ -1,4 +1,4 @@
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- declare function _default({ jbrequire }: {
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- jbrequire: any;
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- }): any;
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- export default _default;
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+ declare function _default({ jbrequire }: {
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+ jbrequire: any;
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+ }): any;
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+ export default _default;
@@ -1,10 +1,10 @@
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- /// <reference types="react" />
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- import PluginManager from '@jbrowse/core/PluginManager';
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- declare const _default: (pluginManager: PluginManager) => ({ model: { renderProps: { radius }, }, }: {
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- model: {
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- renderProps: {
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- radius: number;
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- };
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- };
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- }) => JSX.Element | null;
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- export default _default;
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+ /// <reference types="react" />
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+ import PluginManager from '@jbrowse/core/PluginManager';
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+ declare const _default: (pluginManager: PluginManager) => ({ model: { renderProps: { radius }, }, }: {
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+ model: {
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+ renderProps: {
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+ radius: number;
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+ };
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+ };
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+ }) => JSX.Element | null;
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+ export default _default;
@@ -1,4 +1,4 @@
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- declare function _default({ jbrequire }: {
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- jbrequire: any;
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- }): any;
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- export default _default;
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+ declare function _default({ jbrequire }: {
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+ jbrequire: any;
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+ }): any;
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+ export default _default;
@@ -1,3 +1,3 @@
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- export { default as BaseChordDisplayComponentFactory } from './components/BaseChordDisplay';
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- export { BaseChordDisplayModel } from './models/BaseChordDisplayModel';
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- export { baseChordDisplayConfig } from './models/baseChordDisplayConfig';
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+ export { default as BaseChordDisplayComponentFactory } from './components/BaseChordDisplay';
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+ export { BaseChordDisplayModel } from './models/BaseChordDisplayModel';
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+ export { baseChordDisplayConfig } from './models/baseChordDisplayConfig';
@@ -1,99 +1,99 @@
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- import RendererType from '@jbrowse/core/pluggableElementTypes/renderers/RendererType';
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- import { AnyReactComponentType } from '@jbrowse/core/util';
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- import { Feature } from '@jbrowse/core/util/simpleFeature';
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- import React from 'react';
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- export declare const BaseChordDisplayModel: import("mobx-state-tree").IModelType<{
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- id: import("mobx-state-tree").IOptionalIType<import("mobx-state-tree").ISimpleType<string>, [undefined]>;
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- type: import("mobx-state-tree").ISimpleType<string>;
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- rpcDriverName: import("mobx-state-tree").IMaybe<import("mobx-state-tree").ISimpleType<string>>;
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- } & {
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- bezierRadiusRatio: import("mobx-state-tree").IType<number | undefined, number, number>;
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- assemblyName: import("mobx-state-tree").IMaybe<import("mobx-state-tree").ISimpleType<string>>;
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- }, {
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- rendererTypeName: string;
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- error: unknown;
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- } & {
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- readonly RenderingComponent: React.FC<{
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- model: import("mobx-state-tree").ModelInstanceTypeProps<{
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- id: import("mobx-state-tree").IOptionalIType<import("mobx-state-tree").ISimpleType<string>, [undefined]>;
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- type: import("mobx-state-tree").ISimpleType<string>;
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- rpcDriverName: import("mobx-state-tree").IMaybe<import("mobx-state-tree").ISimpleType<string>>;
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- }> & {
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- rendererTypeName: string;
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- error: unknown;
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- } & import("mobx-state-tree").IStateTreeNode<import("mobx-state-tree").IModelType<{
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- id: import("mobx-state-tree").IOptionalIType<import("mobx-state-tree").ISimpleType<string>, [undefined]>;
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- type: import("mobx-state-tree").ISimpleType<string>;
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- rpcDriverName: import("mobx-state-tree").IMaybe<import("mobx-state-tree").ISimpleType<string>>;
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- }, {
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- rendererTypeName: string;
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- error: unknown;
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- }, import("mobx-state-tree")._NotCustomized, import("mobx-state-tree")._NotCustomized>>;
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- onHorizontalScroll?: Function | undefined;
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- blockState?: Record<string, any> | undefined;
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- }>;
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- readonly DisplayBlurb: React.FC<{
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- model: import("mobx-state-tree").ModelInstanceTypeProps<{
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- id: import("mobx-state-tree").IOptionalIType<import("mobx-state-tree").ISimpleType<string>, [undefined]>;
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- type: import("mobx-state-tree").ISimpleType<string>;
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- rpcDriverName: import("mobx-state-tree").IMaybe<import("mobx-state-tree").ISimpleType<string>>;
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- }> & {
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- rendererTypeName: string;
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- error: unknown;
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- } & import("mobx-state-tree").IStateTreeNode<import("mobx-state-tree").IModelType<{
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- id: import("mobx-state-tree").IOptionalIType<import("mobx-state-tree").ISimpleType<string>, [undefined]>;
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- type: import("mobx-state-tree").ISimpleType<string>;
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- rpcDriverName: import("mobx-state-tree").IMaybe<import("mobx-state-tree").ISimpleType<string>>;
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- }, {
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- rendererTypeName: string;
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- error: unknown;
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- }, import("mobx-state-tree")._NotCustomized, import("mobx-state-tree")._NotCustomized>>;
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- }> | null;
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- readonly adapterConfig: any;
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- readonly parentTrack: any;
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- renderProps(): any;
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- readonly rendererType: any;
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- readonly DisplayMessageComponent: React.FC<any> | undefined;
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- trackMenuItems(): import("@jbrowse/core/ui").MenuItem[];
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- readonly viewMenuActions: import("@jbrowse/core/ui").MenuItem[];
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- regionCannotBeRendered(): undefined;
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- } & {
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- setError(error?: unknown): void;
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- setRpcDriverName(rpcDriverName: string): void;
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- reload(): void;
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- } & {
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- filled: boolean;
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- reactElement: React.ReactElement<any, string | ((props: any) => React.ReactElement<any, any> | null) | (new (props: any) => React.Component<any, any, any>)> | undefined;
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- data: undefined;
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- message: string;
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- renderingComponent: React.ComponentClass<any, any> | React.FunctionComponent<any> | undefined;
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- refNameMap: Record<string, string> | undefined;
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- } & {
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- onChordClick(feature: Feature): void;
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- } & {
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- readonly blockDefinitions: any;
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- renderProps(): any;
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- /**
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- * the pluggable element type object for this diplay's
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- * renderer
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- */
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- readonly rendererType: any;
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- isCompatibleWithRenderer(renderer: RendererType): boolean;
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- /**
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- * returns a string feature ID if the globally-selected object
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- * is probably a feature
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- */
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- readonly selectedFeatureId: string | undefined;
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- } & {
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- renderStarted(): void;
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- renderSuccess({ message, data, reactElement, renderingComponent, }: {
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- message: string;
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- data: any;
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- reactElement: React.ReactElement;
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- renderingComponent: AnyReactComponentType;
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- }): void;
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- renderError(error: unknown): void;
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- setRefNameMap(refNameMap: Record<string, string>): void;
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- } & {
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- afterAttach(): void;
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- }, import("mobx-state-tree")._NotCustomized, import("mobx-state-tree")._NotCustomized>;
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+ import RendererType from '@jbrowse/core/pluggableElementTypes/renderers/RendererType';
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+ import { AnyReactComponentType } from '@jbrowse/core/util';
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+ import { Feature } from '@jbrowse/core/util/simpleFeature';
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+ import React from 'react';
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+ export declare const BaseChordDisplayModel: import("mobx-state-tree").IModelType<{
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+ id: import("mobx-state-tree").IOptionalIType<import("mobx-state-tree").ISimpleType<string>, [undefined]>;
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+ type: import("mobx-state-tree").ISimpleType<string>;
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+ rpcDriverName: import("mobx-state-tree").IMaybe<import("mobx-state-tree").ISimpleType<string>>;
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+ } & {
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+ bezierRadiusRatio: import("mobx-state-tree").IType<number | undefined, number, number>;
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+ assemblyName: import("mobx-state-tree").IMaybe<import("mobx-state-tree").ISimpleType<string>>;
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+ }, {
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+ rendererTypeName: string;
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+ error: unknown;
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+ } & {
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+ readonly RenderingComponent: React.FC<{
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+ model: import("mobx-state-tree").ModelInstanceTypeProps<{
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+ id: import("mobx-state-tree").IOptionalIType<import("mobx-state-tree").ISimpleType<string>, [undefined]>;
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+ type: import("mobx-state-tree").ISimpleType<string>;
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+ rpcDriverName: import("mobx-state-tree").IMaybe<import("mobx-state-tree").ISimpleType<string>>;
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+ }> & {
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+ rendererTypeName: string;
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+ error: unknown;
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+ } & import("mobx-state-tree").IStateTreeNode<import("mobx-state-tree").IModelType<{
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+ id: import("mobx-state-tree").IOptionalIType<import("mobx-state-tree").ISimpleType<string>, [undefined]>;
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+ type: import("mobx-state-tree").ISimpleType<string>;
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+ rpcDriverName: import("mobx-state-tree").IMaybe<import("mobx-state-tree").ISimpleType<string>>;
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+ }, {
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+ rendererTypeName: string;
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+ error: unknown;
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+ }, import("mobx-state-tree")._NotCustomized, import("mobx-state-tree")._NotCustomized>>;
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+ onHorizontalScroll?: Function | undefined;
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+ blockState?: Record<string, any> | undefined;
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+ }>;
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+ readonly DisplayBlurb: React.FC<{
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+ model: import("mobx-state-tree").ModelInstanceTypeProps<{
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+ id: import("mobx-state-tree").IOptionalIType<import("mobx-state-tree").ISimpleType<string>, [undefined]>;
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+ type: import("mobx-state-tree").ISimpleType<string>;
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+ rpcDriverName: import("mobx-state-tree").IMaybe<import("mobx-state-tree").ISimpleType<string>>;
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+ }> & {
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+ rendererTypeName: string;
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+ error: unknown;
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+ } & import("mobx-state-tree").IStateTreeNode<import("mobx-state-tree").IModelType<{
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+ id: import("mobx-state-tree").IOptionalIType<import("mobx-state-tree").ISimpleType<string>, [undefined]>;
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+ type: import("mobx-state-tree").ISimpleType<string>;
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+ rpcDriverName: import("mobx-state-tree").IMaybe<import("mobx-state-tree").ISimpleType<string>>;
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+ }, {
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+ rendererTypeName: string;
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+ error: unknown;
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+ }, import("mobx-state-tree")._NotCustomized, import("mobx-state-tree")._NotCustomized>>;
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+ }> | null;
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+ readonly adapterConfig: any;
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+ readonly parentTrack: any;
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+ renderProps(): any;
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+ readonly rendererType: any;
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+ readonly DisplayMessageComponent: React.FC<any> | undefined;
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+ trackMenuItems(): import("@jbrowse/core/ui").MenuItem[];
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+ readonly viewMenuActions: import("@jbrowse/core/ui").MenuItem[];
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+ regionCannotBeRendered(): undefined;
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+ } & {
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+ setError(error?: unknown): void;
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+ setRpcDriverName(rpcDriverName: string): void;
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+ reload(): void;
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+ } & {
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+ filled: boolean;
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+ reactElement: React.ReactElement<any, string | React.JSXElementConstructor<any>> | undefined;
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+ data: undefined;
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+ message: string;
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+ renderingComponent: AnyReactComponentType | undefined;
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+ refNameMap: Record<string, string> | undefined;
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+ } & {
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+ onChordClick(feature: Feature): void;
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+ } & {
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+ readonly blockDefinitions: any;
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+ renderProps(): any;
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+ /**
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+ * the pluggable element type object for this diplay's
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+ * renderer
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+ */
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+ readonly rendererType: any;
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+ isCompatibleWithRenderer(renderer: RendererType): boolean;
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+ /**
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+ * returns a string feature ID if the globally-selected object
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+ * is probably a feature
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+ */
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+ readonly selectedFeatureId: string | undefined;
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+ } & {
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+ renderStarted(): void;
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+ renderSuccess({ message, data, reactElement, renderingComponent, }: {
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+ message: string;
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+ data: any;
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+ reactElement: React.ReactElement;
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+ renderingComponent: AnyReactComponentType;
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+ }): void;
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+ renderError(error: unknown): void;
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+ setRefNameMap(refNameMap: Record<string, string>): void;
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+ } & {
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+ afterAttach(): void;
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+ }, import("mobx-state-tree")._NotCustomized, import("mobx-state-tree")._NotCustomized>;
@@ -1,2 +1,2 @@
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- declare const baseChordDisplayConfig: import("@jbrowse/core/configuration").AnyConfigurationSchemaType;
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- export { baseChordDisplayConfig };
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+ declare const baseChordDisplayConfig: import("@jbrowse/core/configuration").AnyConfigurationSchemaType;
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+ export { baseChordDisplayConfig };
@@ -1,30 +1,30 @@
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- declare function _default({ jbrequire }: {
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- jbrequire: any;
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- }): {
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- renderReactionData: (self: any) => {
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- rendererType: any;
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- rpcManager: any;
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- renderProps: any;
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- renderArgs: {
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- assemblyName: any;
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- adapterConfig: any;
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- rendererType: any;
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- regions: any;
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- blockDefinitions: any;
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- sessionId: any;
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- timeout: number;
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- };
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- };
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- renderReactionEffect: (props: any, signal: any, self: any) => Promise<{
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- message: any;
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- html?: undefined;
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- data?: undefined;
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- renderingComponent?: undefined;
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- } | {
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- html: any;
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- data: any;
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- renderingComponent: any;
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- message?: undefined;
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- }>;
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- };
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- export default _default;
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+ declare function _default({ jbrequire }: {
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+ jbrequire: any;
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+ }): {
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+ renderReactionData: (self: any) => {
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+ rendererType: any;
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+ rpcManager: any;
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+ renderProps: any;
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+ renderArgs: {
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+ assemblyName: any;
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+ adapterConfig: any;
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+ rendererType: any;
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+ regions: any;
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+ blockDefinitions: any;
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+ sessionId: any;
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+ timeout: number;
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+ };
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+ };
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+ renderReactionEffect: (props: any, signal: any, self: any) => Promise<{
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+ message: any;
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+ html?: undefined;
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+ data?: undefined;
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+ renderingComponent?: undefined;
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+ } | {
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+ html: any;
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+ data: any;
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+ renderingComponent: any;
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+ message?: undefined;
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+ }>;
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+ };
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+ export default _default;
@@ -1,4 +1,4 @@
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- export default CircularView;
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- declare function CircularView({ model }: {
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- model: any;
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- }): JSX.Element;
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+ export default CircularView;
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+ declare function CircularView({ model }: {
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+ model: any;
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+ }): JSX.Element;
@@ -1,5 +1,5 @@
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- /// <reference types="react" />
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- declare const ImportForm: ({ model }: {
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- model: any;
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- }) => JSX.Element;
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- export default ImportForm;
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+ /// <reference types="react" />
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+ declare const ImportForm: ({ model }: {
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+ model: any;
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+ }) => JSX.Element;
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+ export default ImportForm;
@@ -1,5 +1,5 @@
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- export default CircularRuler;
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- declare function CircularRuler({ model, slice }: {
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- model: any;
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- slice: any;
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- }): JSX.Element;
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+ export default CircularRuler;
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+ declare function CircularRuler({ model, slice }: {
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+ model: any;
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+ slice: any;
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+ }): JSX.Element;
@@ -1,97 +1,97 @@
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- import { AnyConfigurationModel } from '@jbrowse/core/configuration/configurationSchema';
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- import PluginManager from '@jbrowse/core/PluginManager';
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- import { SnapshotOrInstance, Instance } from 'mobx-state-tree';
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- import { Region } from '@jbrowse/core/util/types/mst';
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- export default function CircularView(pluginManager: PluginManager): import("mobx-state-tree").IModelType<{
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- id: import("mobx-state-tree").IOptionalIType<import("mobx-state-tree").ISimpleType<string>, [undefined]>;
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- displayName: import("mobx-state-tree").IMaybe<import("mobx-state-tree").ISimpleType<string>>;
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- } & {
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- type: import("mobx-state-tree").ISimpleType<"CircularView">;
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- offsetRadians: import("mobx-state-tree").IType<number | undefined, number, number>;
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- bpPerPx: import("mobx-state-tree").IType<number | undefined, number, number>;
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- tracks: import("mobx-state-tree").IArrayType<import("mobx-state-tree").IAnyType>;
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- hideVerticalResizeHandle: import("mobx-state-tree").IType<boolean | undefined, boolean, boolean>;
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- hideTrackSelectorButton: import("mobx-state-tree").IType<boolean | undefined, boolean, boolean>;
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- lockedFitToWindow: import("mobx-state-tree").IType<boolean | undefined, boolean, boolean>;
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- disableImportForm: import("mobx-state-tree").IType<boolean | undefined, boolean, boolean>;
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- height: import("mobx-state-tree").IOptionalIType<import("mobx-state-tree").ISimpleType<number>, [undefined]>;
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- minimumRadiusPx: import("mobx-state-tree").IType<number | undefined, number, number>;
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- spacingPx: import("mobx-state-tree").IType<number | undefined, number, number>;
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- paddingPx: import("mobx-state-tree").IType<number | undefined, number, number>;
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- lockedPaddingPx: import("mobx-state-tree").IType<number | undefined, number, number>;
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- minVisibleWidth: import("mobx-state-tree").IType<number | undefined, number, number>;
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- minimumBlockWidth: import("mobx-state-tree").IType<number | undefined, number, number>;
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- displayedRegions: import("mobx-state-tree").IArrayType<import("mobx-state-tree").IModelType<{
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- refName: import("mobx-state-tree").ISimpleType<string>;
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- start: import("mobx-state-tree").ISimpleType<number>;
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- end: import("mobx-state-tree").ISimpleType<number>;
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- reversed: import("mobx-state-tree").IOptionalIType<import("mobx-state-tree").ISimpleType<boolean>, [undefined]>;
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- } & {
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- assemblyName: import("mobx-state-tree").ISimpleType<string>;
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- }, {
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- setRefName(newRefName: string): void;
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- }, import("mobx-state-tree")._NotCustomized, import("mobx-state-tree")._NotCustomized>>;
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- scrollX: import("mobx-state-tree").IType<number | undefined, number, number>;
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- scrollY: import("mobx-state-tree").IType<number | undefined, number, number>;
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- trackSelectorType: import("mobx-state-tree").IType<string | undefined, string, string>;
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- }, {
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- width: number;
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- } & {
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- menuItems(): import("@jbrowse/core/ui").MenuItem[];
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- } & {
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- setDisplayName(name: string): void;
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- setWidth(newWidth: number): void;
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- } & {
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- width: number;
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- } & {
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- readonly staticSlices: import("./slices").Slice[];
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- readonly visibleStaticSlices: import("./slices").Slice[];
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- readonly visibleSection: {
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- rho: number[];
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- theta: number[];
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- };
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- readonly circumferencePx: number;
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- readonly radiusPx: number;
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- readonly bpPerRadian: number;
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- readonly pxPerRadian: number;
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- readonly centerXY: [number, number];
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- readonly totalBp: number;
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- readonly maximumRadiusPx: number;
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- readonly maxBpPerPx: number;
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- readonly minBpPerPx: number;
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- readonly atMaxBpPerPx: boolean;
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- readonly atMinBpPerPx: boolean;
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- readonly tooSmallToLock: boolean;
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- readonly figureDimensions: number[];
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- readonly figureWidth: number;
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- readonly figureHeight: number;
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- readonly elidedRegions: any[];
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- readonly assemblyNames: string[];
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- readonly initialized: boolean;
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- } & {
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- error: Error | undefined;
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- } & {
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- setWidth(newWidth: number): number;
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- setHeight(newHeight: number): number;
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- resizeHeight(distance: number): number;
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- resizeWidth(distance: number): number;
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- rotateClockwiseButton(): void;
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- rotateCounterClockwiseButton(): void;
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- rotateClockwise(distance?: number): void;
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- rotateCounterClockwise(distance?: number): void;
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- zoomInButton(): void;
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- zoomOutButton(): void;
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- setBpPerPx(newVal: number): void;
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- setModelViewWhenAdjust(secondCondition: boolean): void;
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- closeView(): void;
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- setDisplayedRegions(regions: SnapshotOrInstance<typeof Region>[]): void;
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- activateTrackSelector(): import("@jbrowse/core/util").Widget;
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- toggleTrack(trackId: string): void;
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- setError(error: Error): void;
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- showTrack(trackId: string, initialSnapshot?: {}): void;
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- addTrackConf(configuration: AnyConfigurationModel, initialSnapshot?: {}): void;
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- hideTrack(trackId: string): number;
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- toggleFitToWindowLock(): boolean;
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- }, import("mobx-state-tree")._NotCustomized, import("mobx-state-tree")._NotCustomized>;
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- export declare type CircularViewStateModel = ReturnType<typeof CircularView>;
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- export declare type CircularViewModel = Instance<CircularViewStateModel>;
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+ import { AnyConfigurationModel } from '@jbrowse/core/configuration/configurationSchema';
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+ import PluginManager from '@jbrowse/core/PluginManager';
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+ import { SnapshotOrInstance, Instance } from 'mobx-state-tree';
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+ import { Region } from '@jbrowse/core/util/types/mst';
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+ export default function CircularView(pluginManager: PluginManager): import("mobx-state-tree").IModelType<{
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+ id: import("mobx-state-tree").IOptionalIType<import("mobx-state-tree").ISimpleType<string>, [undefined]>;
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+ displayName: import("mobx-state-tree").IMaybe<import("mobx-state-tree").ISimpleType<string>>;
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+ } & {
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+ type: import("mobx-state-tree").ISimpleType<"CircularView">;
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+ offsetRadians: import("mobx-state-tree").IType<number | undefined, number, number>;
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+ bpPerPx: import("mobx-state-tree").IType<number | undefined, number, number>;
12
+ tracks: import("mobx-state-tree").IArrayType<import("mobx-state-tree").IAnyType>;
13
+ hideVerticalResizeHandle: import("mobx-state-tree").IType<boolean | undefined, boolean, boolean>;
14
+ hideTrackSelectorButton: import("mobx-state-tree").IType<boolean | undefined, boolean, boolean>;
15
+ lockedFitToWindow: import("mobx-state-tree").IType<boolean | undefined, boolean, boolean>;
16
+ disableImportForm: import("mobx-state-tree").IType<boolean | undefined, boolean, boolean>;
17
+ height: import("mobx-state-tree").IOptionalIType<import("mobx-state-tree").ISimpleType<number>, [undefined]>;
18
+ minimumRadiusPx: import("mobx-state-tree").IType<number | undefined, number, number>;
19
+ spacingPx: import("mobx-state-tree").IType<number | undefined, number, number>;
20
+ paddingPx: import("mobx-state-tree").IType<number | undefined, number, number>;
21
+ lockedPaddingPx: import("mobx-state-tree").IType<number | undefined, number, number>;
22
+ minVisibleWidth: import("mobx-state-tree").IType<number | undefined, number, number>;
23
+ minimumBlockWidth: import("mobx-state-tree").IType<number | undefined, number, number>;
24
+ displayedRegions: import("mobx-state-tree").IArrayType<import("mobx-state-tree").IModelType<{
25
+ refName: import("mobx-state-tree").ISimpleType<string>;
26
+ start: import("mobx-state-tree").ISimpleType<number>;
27
+ end: import("mobx-state-tree").ISimpleType<number>;
28
+ reversed: import("mobx-state-tree").IOptionalIType<import("mobx-state-tree").ISimpleType<boolean>, [undefined]>;
29
+ } & {
30
+ assemblyName: import("mobx-state-tree").ISimpleType<string>;
31
+ }, {
32
+ setRefName(newRefName: string): void;
33
+ }, import("mobx-state-tree")._NotCustomized, import("mobx-state-tree")._NotCustomized>>;
34
+ scrollX: import("mobx-state-tree").IType<number | undefined, number, number>;
35
+ scrollY: import("mobx-state-tree").IType<number | undefined, number, number>;
36
+ trackSelectorType: import("mobx-state-tree").IType<string | undefined, string, string>;
37
+ }, {
38
+ width: number;
39
+ } & {
40
+ menuItems(): import("@jbrowse/core/ui").MenuItem[];
41
+ } & {
42
+ setDisplayName(name: string): void;
43
+ setWidth(newWidth: number): void;
44
+ } & {
45
+ width: number;
46
+ } & {
47
+ readonly staticSlices: import("./slices").Slice[];
48
+ readonly visibleStaticSlices: import("./slices").Slice[];
49
+ readonly visibleSection: {
50
+ rho: number[];
51
+ theta: number[];
52
+ };
53
+ readonly circumferencePx: number;
54
+ readonly radiusPx: number;
55
+ readonly bpPerRadian: number;
56
+ readonly pxPerRadian: number;
57
+ readonly centerXY: [number, number];
58
+ readonly totalBp: number;
59
+ readonly maximumRadiusPx: number;
60
+ readonly maxBpPerPx: number;
61
+ readonly minBpPerPx: number;
62
+ readonly atMaxBpPerPx: boolean;
63
+ readonly atMinBpPerPx: boolean;
64
+ readonly tooSmallToLock: boolean;
65
+ readonly figureDimensions: number[];
66
+ readonly figureWidth: number;
67
+ readonly figureHeight: number;
68
+ readonly elidedRegions: any[];
69
+ readonly assemblyNames: string[];
70
+ readonly initialized: boolean;
71
+ } & {
72
+ error: Error | undefined;
73
+ } & {
74
+ setWidth(newWidth: number): number;
75
+ setHeight(newHeight: number): number;
76
+ resizeHeight(distance: number): number;
77
+ resizeWidth(distance: number): number;
78
+ rotateClockwiseButton(): void;
79
+ rotateCounterClockwiseButton(): void;
80
+ rotateClockwise(distance?: number): void;
81
+ rotateCounterClockwise(distance?: number): void;
82
+ zoomInButton(): void;
83
+ zoomOutButton(): void;
84
+ setBpPerPx(newVal: number): void;
85
+ setModelViewWhenAdjust(secondCondition: boolean): void;
86
+ closeView(): void;
87
+ setDisplayedRegions(regions: SnapshotOrInstance<typeof Region>[]): void;
88
+ activateTrackSelector(): import("@jbrowse/core/util").Widget;
89
+ toggleTrack(trackId: string): void;
90
+ setError(error: Error): void;
91
+ showTrack(trackId: string, initialSnapshot?: {}): void;
92
+ addTrackConf(configuration: AnyConfigurationModel, initialSnapshot?: {}): void;
93
+ hideTrack(trackId: string): number;
94
+ toggleFitToWindowLock(): boolean;
95
+ }, import("mobx-state-tree")._NotCustomized, import("mobx-state-tree")._NotCustomized>;
96
+ export declare type CircularViewStateModel = ReturnType<typeof CircularView>;
97
+ export declare type CircularViewModel = Instance<CircularViewStateModel>;
@@ -1,27 +1,27 @@
1
- import { Region } from '@jbrowse/core/util';
2
- export declare class Slice {
3
- region: Region & {
4
- widthBp: number;
5
- elided: boolean;
6
- };
7
- radianWidth: number;
8
- key: string;
9
- offsetRadians: number;
10
- startRadians: number;
11
- endRadians: number;
12
- bpPerRadian: number;
13
- flipped: boolean;
14
- constructor(view: {
15
- bpPerRadian: number;
16
- }, region: Region & {
17
- widthBp: number;
18
- elided: boolean;
19
- }, currentRadianOffset: number, radianWidth: number);
20
- bpToXY(bp: number, radiusPx: number): [number, number];
21
- toJSON(): {
22
- [k: string]: any;
23
- };
24
- }
25
- declare function calculateStaticSlices(self: any): Slice[];
26
- declare function sliceIsVisible(self: any, slice: Slice): boolean;
27
- export { calculateStaticSlices, sliceIsVisible };
1
+ import { Region } from '@jbrowse/core/util';
2
+ export declare class Slice {
3
+ region: Region & {
4
+ widthBp: number;
5
+ elided: boolean;
6
+ };
7
+ radianWidth: number;
8
+ key: string;
9
+ offsetRadians: number;
10
+ startRadians: number;
11
+ endRadians: number;
12
+ bpPerRadian: number;
13
+ flipped: boolean;
14
+ constructor(view: {
15
+ bpPerRadian: number;
16
+ }, region: Region & {
17
+ widthBp: number;
18
+ elided: boolean;
19
+ }, currentRadianOffset: number, radianWidth: number);
20
+ bpToXY(bp: number, radiusPx: number): [number, number];
21
+ toJSON(): {
22
+ [k: string]: any;
23
+ };
24
+ }
25
+ declare function calculateStaticSlices(self: any): Slice[];
26
+ declare function sliceIsVisible(self: any, slice: Slice): boolean;
27
+ export { calculateStaticSlices, sliceIsVisible };
@@ -1,6 +1,6 @@
1
- export declare function cartesianToPolar(x: number, y: number): number[];
2
- export declare function thetaRangesOverlap(r1start: number, r1length: number, r2start: number, r2length: number): boolean;
3
- export declare function viewportVisibleSection(viewSides: [number, number, number, number], circleCenter: [number, number], circleRadius: number): {
4
- rho: number[];
5
- theta: number[];
6
- };
1
+ export declare function cartesianToPolar(x: number, y: number): number[];
2
+ export declare function thetaRangesOverlap(r1start: number, r1length: number, r2start: number, r2length: number): boolean;
3
+ export declare function viewportVisibleSection(viewSides: [number, number, number, number], circleCenter: [number, number], circleRadius: number): {
4
+ rho: number[];
5
+ theta: number[];
6
+ };