@jbrowse/plugin-bed 2.6.2 → 2.7.0
This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
- package/dist/BedAdapter/BedAdapter.d.ts +1 -3
- package/dist/BedpeAdapter/BedpeAdapter.d.ts +1 -3
- package/dist/BedpeAdapter/BedpeAdapter.js +0 -2
- package/esm/BedAdapter/BedAdapter.d.ts +1 -3
- package/esm/BedpeAdapter/BedpeAdapter.d.ts +1 -3
- package/esm/BedpeAdapter/BedpeAdapter.js +0 -2
- package/package.json +3 -3
|
@@ -13,9 +13,7 @@ export default class BedAdapter extends BaseFeatureDataAdapter {
|
|
|
13
13
|
colStart: number;
|
|
14
14
|
colEnd: number;
|
|
15
15
|
}>;
|
|
16
|
-
protected intervalTrees:
|
|
17
|
-
[key: string]: Promise<IntervalTree | undefined> | undefined;
|
|
18
|
-
};
|
|
16
|
+
protected intervalTrees: Record<string, Promise<IntervalTree | undefined> | undefined>;
|
|
19
17
|
static capabilities: string[];
|
|
20
18
|
private loadDataP;
|
|
21
19
|
private loadData;
|
|
@@ -9,9 +9,7 @@ export default class BedpeAdapter extends BaseFeatureDataAdapter {
|
|
|
9
9
|
feats2: Record<string, string[] | undefined>;
|
|
10
10
|
columnNames: string[];
|
|
11
11
|
}>;
|
|
12
|
-
protected intervalTrees:
|
|
13
|
-
[key: string]: Promise<IntervalTree | undefined> | undefined;
|
|
14
|
-
};
|
|
12
|
+
protected intervalTrees: Record<string, Promise<IntervalTree | undefined> | undefined>;
|
|
15
13
|
static capabilities: string[];
|
|
16
14
|
private loadDataP;
|
|
17
15
|
private loadData;
|
|
@@ -91,9 +91,7 @@ class BedpeAdapter extends BaseAdapter_1.BaseFeatureDataAdapter {
|
|
|
91
91
|
if (!feats2[r2]) {
|
|
92
92
|
feats2[r2] = [];
|
|
93
93
|
}
|
|
94
|
-
// eslint-disable-next-line @typescript-eslint/no-non-null-assertion
|
|
95
94
|
feats1[r1].push(line);
|
|
96
|
-
// eslint-disable-next-line @typescript-eslint/no-non-null-assertion
|
|
97
95
|
feats2[r2].push(line);
|
|
98
96
|
}
|
|
99
97
|
const columnNames = this.getConf('columnNames');
|
|
@@ -13,9 +13,7 @@ export default class BedAdapter extends BaseFeatureDataAdapter {
|
|
|
13
13
|
colStart: number;
|
|
14
14
|
colEnd: number;
|
|
15
15
|
}>;
|
|
16
|
-
protected intervalTrees:
|
|
17
|
-
[key: string]: Promise<IntervalTree | undefined> | undefined;
|
|
18
|
-
};
|
|
16
|
+
protected intervalTrees: Record<string, Promise<IntervalTree | undefined> | undefined>;
|
|
19
17
|
static capabilities: string[];
|
|
20
18
|
private loadDataP;
|
|
21
19
|
private loadData;
|
|
@@ -9,9 +9,7 @@ export default class BedpeAdapter extends BaseFeatureDataAdapter {
|
|
|
9
9
|
feats2: Record<string, string[] | undefined>;
|
|
10
10
|
columnNames: string[];
|
|
11
11
|
}>;
|
|
12
|
-
protected intervalTrees:
|
|
13
|
-
[key: string]: Promise<IntervalTree | undefined> | undefined;
|
|
14
|
-
};
|
|
12
|
+
protected intervalTrees: Record<string, Promise<IntervalTree | undefined> | undefined>;
|
|
15
13
|
static capabilities: string[];
|
|
16
14
|
private loadDataP;
|
|
17
15
|
private loadData;
|
|
@@ -84,9 +84,7 @@ class BedpeAdapter extends BaseFeatureDataAdapter {
|
|
|
84
84
|
if (!feats2[r2]) {
|
|
85
85
|
feats2[r2] = [];
|
|
86
86
|
}
|
|
87
|
-
// eslint-disable-next-line @typescript-eslint/no-non-null-assertion
|
|
88
87
|
feats1[r1].push(line);
|
|
89
|
-
// eslint-disable-next-line @typescript-eslint/no-non-null-assertion
|
|
90
88
|
feats2[r2].push(line);
|
|
91
89
|
}
|
|
92
90
|
const columnNames = this.getConf('columnNames');
|
package/package.json
CHANGED
|
@@ -1,6 +1,6 @@
|
|
|
1
1
|
{
|
|
2
2
|
"name": "@jbrowse/plugin-bed",
|
|
3
|
-
"version": "2.
|
|
3
|
+
"version": "2.7.0",
|
|
4
4
|
"description": "JBrowse 2 bed adapters, tracks, etc.",
|
|
5
5
|
"keywords": [
|
|
6
6
|
"jbrowse",
|
|
@@ -45,7 +45,7 @@
|
|
|
45
45
|
"peerDependencies": {
|
|
46
46
|
"@jbrowse/core": "^2.0.0",
|
|
47
47
|
"mobx": "^6.0.0",
|
|
48
|
-
"mobx-react": "^
|
|
48
|
+
"mobx-react": "^9.0.0",
|
|
49
49
|
"mobx-state-tree": "^5.0.0",
|
|
50
50
|
"rxjs": "^7.0.0"
|
|
51
51
|
},
|
|
@@ -55,5 +55,5 @@
|
|
|
55
55
|
"distModule": "esm/index.js",
|
|
56
56
|
"srcModule": "src/index.ts",
|
|
57
57
|
"module": "esm/index.js",
|
|
58
|
-
"gitHead": "
|
|
58
|
+
"gitHead": "dbe7fb1af01fc89f833d2744635eb44a17365b41"
|
|
59
59
|
}
|