@jbrowse/plugin-bed 2.2.2 → 2.3.0

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Files changed (21) hide show
  1. package/dist/BedAdapter/index.js +1 -0
  2. package/dist/BedAdapter/index.js.map +1 -1
  3. package/dist/BedTabixAdapter/index.js +1 -0
  4. package/dist/BedTabixAdapter/index.js.map +1 -1
  5. package/dist/BedpeAdapter/index.js +1 -0
  6. package/dist/BedpeAdapter/index.js.map +1 -1
  7. package/dist/BigBedAdapter/index.js +1 -0
  8. package/dist/BigBedAdapter/index.js.map +1 -1
  9. package/esm/BedAdapter/index.js +1 -0
  10. package/esm/BedAdapter/index.js.map +1 -1
  11. package/esm/BedTabixAdapter/index.js +1 -0
  12. package/esm/BedTabixAdapter/index.js.map +1 -1
  13. package/esm/BedpeAdapter/index.js +1 -0
  14. package/esm/BedpeAdapter/index.js.map +1 -1
  15. package/esm/BigBedAdapter/index.js +1 -0
  16. package/esm/BigBedAdapter/index.js.map +1 -1
  17. package/package.json +2 -2
  18. package/src/BedAdapter/index.ts +1 -0
  19. package/src/BedTabixAdapter/index.ts +1 -0
  20. package/src/BedpeAdapter/index.ts +1 -0
  21. package/src/BigBedAdapter/index.ts +1 -0
package/dist/BedAdapter/index.js CHANGED
@@ -31,6 +31,7 @@ const configSchema_1 = __importDefault(require("./configSchema"));
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  exports.default = (pluginManager) => {
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  pluginManager.addAdapterType(() => new AdapterType_1.default({
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  name: 'BedAdapter',
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+ displayName: 'BED adapter',
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  configSchema: configSchema_1.default,
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  getAdapterClass: () => Promise.resolve().then(() => __importStar(require('./BedAdapter'))).then(r => r.default),
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  }));
package/dist/BedAdapter/index.js.map CHANGED
@@ -1 +1 @@
1
- {"version":3,"file":"index.js","sourceRoot":"","sources":["../../src/BedAdapter/index.ts"],"names":[],"mappings":";;;;;;;;;;;;;;;;;;;;;;;;;;;;AACA,kGAAyE;AAEzE,kEAAyC;AAEzC,kBAAe,CAAC,aAA4B,EAAE,EAAE;IAC9C,aAAa,CAAC,cAAc,CAC1B,GAAG,EAAE,CACH,IAAI,qBAAW,CAAC;QACd,IAAI,EAAE,YAAY;QAClB,YAAY,EAAZ,sBAAY;QACZ,eAAe,EAAE,GAAG,EAAE,CAAC,kDAAO,cAAc,IAAE,IAAI,CAAC,CAAC,CAAC,EAAE,CAAC,CAAC,CAAC,OAAO,CAAC;KACnE,CAAC,CACL,CAAA;AACH,CAAC,CAAA"}
1
+ {"version":3,"file":"index.js","sourceRoot":"","sources":["../../src/BedAdapter/index.ts"],"names":[],"mappings":";;;;;;;;;;;;;;;;;;;;;;;;;;;;AACA,kGAAyE;AAEzE,kEAAyC;AAEzC,kBAAe,CAAC,aAA4B,EAAE,EAAE;IAC9C,aAAa,CAAC,cAAc,CAC1B,GAAG,EAAE,CACH,IAAI,qBAAW,CAAC;QACd,IAAI,EAAE,YAAY;QAClB,WAAW,EAAE,aAAa;QAC1B,YAAY,EAAZ,sBAAY;QACZ,eAAe,EAAE,GAAG,EAAE,CAAC,kDAAO,cAAc,IAAE,IAAI,CAAC,CAAC,CAAC,EAAE,CAAC,CAAC,CAAC,OAAO,CAAC;KACnE,CAAC,CACL,CAAA;AACH,CAAC,CAAA"}
package/dist/BedTabixAdapter/index.js CHANGED
@@ -31,6 +31,7 @@ const configSchema_1 = __importDefault(require("./configSchema"));
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  exports.default = (pluginManager) => {
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  pluginManager.addAdapterType(() => new AdapterType_1.default({
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  name: 'BedTabixAdapter',
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+ displayName: 'BED tabix adapter',
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  configSchema: configSchema_1.default,
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  getAdapterClass: () => Promise.resolve().then(() => __importStar(require('./BedTabixAdapter'))).then(r => r.default),
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  }));
package/dist/BedTabixAdapter/index.js.map CHANGED
@@ -1 +1 @@
1
- {"version":3,"file":"index.js","sourceRoot":"","sources":["../../src/BedTabixAdapter/index.ts"],"names":[],"mappings":";;;;;;;;;;;;;;;;;;;;;;;;;;;;AACA,kGAAyE;AAEzE,kEAAyC;AAEzC,kBAAe,CAAC,aAA4B,EAAE,EAAE;IAC9C,aAAa,CAAC,cAAc,CAC1B,GAAG,EAAE,CACH,IAAI,qBAAW,CAAC;QACd,IAAI,EAAE,iBAAiB;QACvB,YAAY,EAAZ,sBAAY;QACZ,eAAe,EAAE,GAAG,EAAE,CAAC,kDAAO,mBAAmB,IAAE,IAAI,CAAC,CAAC,CAAC,EAAE,CAAC,CAAC,CAAC,OAAO,CAAC;KACxE,CAAC,CACL,CAAA;AACH,CAAC,CAAA"}
1
+ {"version":3,"file":"index.js","sourceRoot":"","sources":["../../src/BedTabixAdapter/index.ts"],"names":[],"mappings":";;;;;;;;;;;;;;;;;;;;;;;;;;;;AACA,kGAAyE;AAEzE,kEAAyC;AAEzC,kBAAe,CAAC,aAA4B,EAAE,EAAE;IAC9C,aAAa,CAAC,cAAc,CAC1B,GAAG,EAAE,CACH,IAAI,qBAAW,CAAC;QACd,IAAI,EAAE,iBAAiB;QACvB,WAAW,EAAE,mBAAmB;QAChC,YAAY,EAAZ,sBAAY;QACZ,eAAe,EAAE,GAAG,EAAE,CAAC,kDAAO,mBAAmB,IAAE,IAAI,CAAC,CAAC,CAAC,EAAE,CAAC,CAAC,CAAC,OAAO,CAAC;KACxE,CAAC,CACL,CAAA;AACH,CAAC,CAAA"}
package/dist/BedpeAdapter/index.js CHANGED
@@ -31,6 +31,7 @@ const configSchema_1 = __importDefault(require("./configSchema"));
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  exports.default = (pluginManager) => {
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  pluginManager.addAdapterType(() => new AdapterType_1.default({
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  name: 'BedpeAdapter',
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+ displayName: 'BEDPE adapter',
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  configSchema: configSchema_1.default,
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  getAdapterClass: () => Promise.resolve().then(() => __importStar(require('./BedpeAdapter'))).then(r => r.default),
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  }));
package/dist/BedpeAdapter/index.js.map CHANGED
@@ -1 +1 @@
1
- {"version":3,"file":"index.js","sourceRoot":"","sources":["../../src/BedpeAdapter/index.ts"],"names":[],"mappings":";;;;;;;;;;;;;;;;;;;;;;;;;;;;AACA,kGAAyE;AAEzE,kEAAyC;AAEzC,kBAAe,CAAC,aAA4B,EAAE,EAAE;IAC9C,aAAa,CAAC,cAAc,CAC1B,GAAG,EAAE,CACH,IAAI,qBAAW,CAAC;QACd,IAAI,EAAE,cAAc;QACpB,YAAY,EAAZ,sBAAY;QACZ,eAAe,EAAE,GAAG,EAAE,CAAC,kDAAO,gBAAgB,IAAE,IAAI,CAAC,CAAC,CAAC,EAAE,CAAC,CAAC,CAAC,OAAO,CAAC;KACrE,CAAC,CACL,CAAA;AACH,CAAC,CAAA"}
1
+ {"version":3,"file":"index.js","sourceRoot":"","sources":["../../src/BedpeAdapter/index.ts"],"names":[],"mappings":";;;;;;;;;;;;;;;;;;;;;;;;;;;;AACA,kGAAyE;AAEzE,kEAAyC;AAEzC,kBAAe,CAAC,aAA4B,EAAE,EAAE;IAC9C,aAAa,CAAC,cAAc,CAC1B,GAAG,EAAE,CACH,IAAI,qBAAW,CAAC;QACd,IAAI,EAAE,cAAc;QACpB,WAAW,EAAE,eAAe;QAC5B,YAAY,EAAZ,sBAAY;QACZ,eAAe,EAAE,GAAG,EAAE,CAAC,kDAAO,gBAAgB,IAAE,IAAI,CAAC,CAAC,CAAC,EAAE,CAAC,CAAC,CAAC,OAAO,CAAC;KACrE,CAAC,CACL,CAAA;AACH,CAAC,CAAA"}
package/dist/BigBedAdapter/index.js CHANGED
@@ -31,6 +31,7 @@ const configSchema_1 = __importDefault(require("./configSchema"));
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  exports.default = (pluginManager) => {
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  pluginManager.addAdapterType(() => new AdapterType_1.default({
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  name: 'BigBedAdapter',
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+ displayName: 'BigBed adapter',
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  configSchema: configSchema_1.default,
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  getAdapterClass: () => Promise.resolve().then(() => __importStar(require('./BigBedAdapter'))).then(r => r.default),
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  }));
package/dist/BigBedAdapter/index.js.map CHANGED
@@ -1 +1 @@
1
- {"version":3,"file":"index.js","sourceRoot":"","sources":["../../src/BigBedAdapter/index.ts"],"names":[],"mappings":";;;;;;;;;;;;;;;;;;;;;;;;;;;;AACA,kGAAyE;AAEzE,kEAAyC;AAEzC,kBAAe,CAAC,aAA4B,EAAE,EAAE;IAC9C,aAAa,CAAC,cAAc,CAC1B,GAAG,EAAE,CACH,IAAI,qBAAW,CAAC;QACd,IAAI,EAAE,eAAe;QACrB,YAAY,EAAZ,sBAAY;QACZ,eAAe,EAAE,GAAG,EAAE,CAAC,kDAAO,iBAAiB,IAAE,IAAI,CAAC,CAAC,CAAC,EAAE,CAAC,CAAC,CAAC,OAAO,CAAC;KACtE,CAAC,CACL,CAAA;AACH,CAAC,CAAA"}
1
+ {"version":3,"file":"index.js","sourceRoot":"","sources":["../../src/BigBedAdapter/index.ts"],"names":[],"mappings":";;;;;;;;;;;;;;;;;;;;;;;;;;;;AACA,kGAAyE;AAEzE,kEAAyC;AAEzC,kBAAe,CAAC,aAA4B,EAAE,EAAE;IAC9C,aAAa,CAAC,cAAc,CAC1B,GAAG,EAAE,CACH,IAAI,qBAAW,CAAC;QACd,IAAI,EAAE,eAAe;QACrB,WAAW,EAAE,gBAAgB;QAC7B,YAAY,EAAZ,sBAAY;QACZ,eAAe,EAAE,GAAG,EAAE,CAAC,kDAAO,iBAAiB,IAAE,IAAI,CAAC,CAAC,CAAC,EAAE,CAAC,CAAC,CAAC,OAAO,CAAC;KACtE,CAAC,CACL,CAAA;AACH,CAAC,CAAA"}
package/esm/BedAdapter/index.js CHANGED
@@ -3,6 +3,7 @@ import configSchema from './configSchema';
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  export default (pluginManager) => {
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  pluginManager.addAdapterType(() => new AdapterType({
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  name: 'BedAdapter',
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+ displayName: 'BED adapter',
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  configSchema,
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  getAdapterClass: () => import('./BedAdapter').then(r => r.default),
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  }));
package/esm/BedAdapter/index.js.map CHANGED
@@ -1 +1 @@
1
- {"version":3,"file":"index.js","sourceRoot":"","sources":["../../src/BedAdapter/index.ts"],"names":[],"mappings":"AACA,OAAO,WAAW,MAAM,iDAAiD,CAAA;AAEzE,OAAO,YAAY,MAAM,gBAAgB,CAAA;AAEzC,eAAe,CAAC,aAA4B,EAAE,EAAE;IAC9C,aAAa,CAAC,cAAc,CAC1B,GAAG,EAAE,CACH,IAAI,WAAW,CAAC;QACd,IAAI,EAAE,YAAY;QAClB,YAAY;QACZ,eAAe,EAAE,GAAG,EAAE,CAAC,MAAM,CAAC,cAAc,CAAC,CAAC,IAAI,CAAC,CAAC,CAAC,EAAE,CAAC,CAAC,CAAC,OAAO,CAAC;KACnE,CAAC,CACL,CAAA;AACH,CAAC,CAAA"}
1
+ {"version":3,"file":"index.js","sourceRoot":"","sources":["../../src/BedAdapter/index.ts"],"names":[],"mappings":"AACA,OAAO,WAAW,MAAM,iDAAiD,CAAA;AAEzE,OAAO,YAAY,MAAM,gBAAgB,CAAA;AAEzC,eAAe,CAAC,aAA4B,EAAE,EAAE;IAC9C,aAAa,CAAC,cAAc,CAC1B,GAAG,EAAE,CACH,IAAI,WAAW,CAAC;QACd,IAAI,EAAE,YAAY;QAClB,WAAW,EAAE,aAAa;QAC1B,YAAY;QACZ,eAAe,EAAE,GAAG,EAAE,CAAC,MAAM,CAAC,cAAc,CAAC,CAAC,IAAI,CAAC,CAAC,CAAC,EAAE,CAAC,CAAC,CAAC,OAAO,CAAC;KACnE,CAAC,CACL,CAAA;AACH,CAAC,CAAA"}
package/esm/BedTabixAdapter/index.js CHANGED
@@ -3,6 +3,7 @@ import configSchema from './configSchema';
3
3
  export default (pluginManager) => {
4
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  pluginManager.addAdapterType(() => new AdapterType({
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  name: 'BedTabixAdapter',
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+ displayName: 'BED tabix adapter',
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  configSchema,
7
8
  getAdapterClass: () => import('./BedTabixAdapter').then(r => r.default),
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  }));
package/esm/BedTabixAdapter/index.js.map CHANGED
@@ -1 +1 @@
1
- {"version":3,"file":"index.js","sourceRoot":"","sources":["../../src/BedTabixAdapter/index.ts"],"names":[],"mappings":"AACA,OAAO,WAAW,MAAM,iDAAiD,CAAA;AAEzE,OAAO,YAAY,MAAM,gBAAgB,CAAA;AAEzC,eAAe,CAAC,aAA4B,EAAE,EAAE;IAC9C,aAAa,CAAC,cAAc,CAC1B,GAAG,EAAE,CACH,IAAI,WAAW,CAAC;QACd,IAAI,EAAE,iBAAiB;QACvB,YAAY;QACZ,eAAe,EAAE,GAAG,EAAE,CAAC,MAAM,CAAC,mBAAmB,CAAC,CAAC,IAAI,CAAC,CAAC,CAAC,EAAE,CAAC,CAAC,CAAC,OAAO,CAAC;KACxE,CAAC,CACL,CAAA;AACH,CAAC,CAAA"}
1
+ {"version":3,"file":"index.js","sourceRoot":"","sources":["../../src/BedTabixAdapter/index.ts"],"names":[],"mappings":"AACA,OAAO,WAAW,MAAM,iDAAiD,CAAA;AAEzE,OAAO,YAAY,MAAM,gBAAgB,CAAA;AAEzC,eAAe,CAAC,aAA4B,EAAE,EAAE;IAC9C,aAAa,CAAC,cAAc,CAC1B,GAAG,EAAE,CACH,IAAI,WAAW,CAAC;QACd,IAAI,EAAE,iBAAiB;QACvB,WAAW,EAAE,mBAAmB;QAChC,YAAY;QACZ,eAAe,EAAE,GAAG,EAAE,CAAC,MAAM,CAAC,mBAAmB,CAAC,CAAC,IAAI,CAAC,CAAC,CAAC,EAAE,CAAC,CAAC,CAAC,OAAO,CAAC;KACxE,CAAC,CACL,CAAA;AACH,CAAC,CAAA"}
package/esm/BedpeAdapter/index.js CHANGED
@@ -3,6 +3,7 @@ import configSchema from './configSchema';
3
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  export default (pluginManager) => {
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  pluginManager.addAdapterType(() => new AdapterType({
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  name: 'BedpeAdapter',
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+ displayName: 'BEDPE adapter',
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  configSchema,
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  getAdapterClass: () => import('./BedpeAdapter').then(r => r.default),
8
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  }));
package/esm/BedpeAdapter/index.js.map CHANGED
@@ -1 +1 @@
1
- {"version":3,"file":"index.js","sourceRoot":"","sources":["../../src/BedpeAdapter/index.ts"],"names":[],"mappings":"AACA,OAAO,WAAW,MAAM,iDAAiD,CAAA;AAEzE,OAAO,YAAY,MAAM,gBAAgB,CAAA;AAEzC,eAAe,CAAC,aAA4B,EAAE,EAAE;IAC9C,aAAa,CAAC,cAAc,CAC1B,GAAG,EAAE,CACH,IAAI,WAAW,CAAC;QACd,IAAI,EAAE,cAAc;QACpB,YAAY;QACZ,eAAe,EAAE,GAAG,EAAE,CAAC,MAAM,CAAC,gBAAgB,CAAC,CAAC,IAAI,CAAC,CAAC,CAAC,EAAE,CAAC,CAAC,CAAC,OAAO,CAAC;KACrE,CAAC,CACL,CAAA;AACH,CAAC,CAAA"}
1
+ {"version":3,"file":"index.js","sourceRoot":"","sources":["../../src/BedpeAdapter/index.ts"],"names":[],"mappings":"AACA,OAAO,WAAW,MAAM,iDAAiD,CAAA;AAEzE,OAAO,YAAY,MAAM,gBAAgB,CAAA;AAEzC,eAAe,CAAC,aAA4B,EAAE,EAAE;IAC9C,aAAa,CAAC,cAAc,CAC1B,GAAG,EAAE,CACH,IAAI,WAAW,CAAC;QACd,IAAI,EAAE,cAAc;QACpB,WAAW,EAAE,eAAe;QAC5B,YAAY;QACZ,eAAe,EAAE,GAAG,EAAE,CAAC,MAAM,CAAC,gBAAgB,CAAC,CAAC,IAAI,CAAC,CAAC,CAAC,EAAE,CAAC,CAAC,CAAC,OAAO,CAAC;KACrE,CAAC,CACL,CAAA;AACH,CAAC,CAAA"}
package/esm/BigBedAdapter/index.js CHANGED
@@ -3,6 +3,7 @@ import configSchema from './configSchema';
3
3
  export default (pluginManager) => {
4
4
  pluginManager.addAdapterType(() => new AdapterType({
5
5
  name: 'BigBedAdapter',
6
+ displayName: 'BigBed adapter',
6
7
  configSchema,
7
8
  getAdapterClass: () => import('./BigBedAdapter').then(r => r.default),
8
9
  }));
package/esm/BigBedAdapter/index.js.map CHANGED
@@ -1 +1 @@
1
- {"version":3,"file":"index.js","sourceRoot":"","sources":["../../src/BigBedAdapter/index.ts"],"names":[],"mappings":"AACA,OAAO,WAAW,MAAM,iDAAiD,CAAA;AAEzE,OAAO,YAAY,MAAM,gBAAgB,CAAA;AAEzC,eAAe,CAAC,aAA4B,EAAE,EAAE;IAC9C,aAAa,CAAC,cAAc,CAC1B,GAAG,EAAE,CACH,IAAI,WAAW,CAAC;QACd,IAAI,EAAE,eAAe;QACrB,YAAY;QACZ,eAAe,EAAE,GAAG,EAAE,CAAC,MAAM,CAAC,iBAAiB,CAAC,CAAC,IAAI,CAAC,CAAC,CAAC,EAAE,CAAC,CAAC,CAAC,OAAO,CAAC;KACtE,CAAC,CACL,CAAA;AACH,CAAC,CAAA"}
1
+ {"version":3,"file":"index.js","sourceRoot":"","sources":["../../src/BigBedAdapter/index.ts"],"names":[],"mappings":"AACA,OAAO,WAAW,MAAM,iDAAiD,CAAA;AAEzE,OAAO,YAAY,MAAM,gBAAgB,CAAA;AAEzC,eAAe,CAAC,aAA4B,EAAE,EAAE;IAC9C,aAAa,CAAC,cAAc,CAC1B,GAAG,EAAE,CACH,IAAI,WAAW,CAAC;QACd,IAAI,EAAE,eAAe;QACrB,WAAW,EAAE,gBAAgB;QAC7B,YAAY;QACZ,eAAe,EAAE,GAAG,EAAE,CAAC,MAAM,CAAC,iBAAiB,CAAC,CAAC,IAAI,CAAC,CAAC,CAAC,EAAE,CAAC,CAAC,CAAC,OAAO,CAAC;KACtE,CAAC,CACL,CAAA;AACH,CAAC,CAAA"}
package/package.json CHANGED
@@ -1,6 +1,6 @@
1
1
  {
2
2
  "name": "@jbrowse/plugin-bed",
3
- "version": "2.2.2",
3
+ "version": "2.3.0",
4
4
  "description": "JBrowse 2 bed adapters, tracks, etc.",
5
5
  "keywords": [
6
6
  "jbrowse",
@@ -56,5 +56,5 @@
56
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  "distModule": "esm/index.js",
57
57
  "srcModule": "src/index.ts",
58
58
  "module": "esm/index.js",
59
- "gitHead": "abbc00e8feedbc58de84a7a3e735ec0224909b29"
59
+ "gitHead": "a85b280a8af4d1a11e81ab42913f5f6049e6e580"
60
60
  }
package/src/BedAdapter/index.ts CHANGED
@@ -8,6 +8,7 @@ export default (pluginManager: PluginManager) => {
8
8
  () =>
9
9
  new AdapterType({
10
10
  name: 'BedAdapter',
11
+ displayName: 'BED adapter',
11
12
  configSchema,
12
13
  getAdapterClass: () => import('./BedAdapter').then(r => r.default),
13
14
  }),
package/src/BedTabixAdapter/index.ts CHANGED
@@ -8,6 +8,7 @@ export default (pluginManager: PluginManager) => {
8
8
  () =>
9
9
  new AdapterType({
10
10
  name: 'BedTabixAdapter',
11
+ displayName: 'BED tabix adapter',
11
12
  configSchema,
12
13
  getAdapterClass: () => import('./BedTabixAdapter').then(r => r.default),
13
14
  }),
package/src/BedpeAdapter/index.ts CHANGED
@@ -8,6 +8,7 @@ export default (pluginManager: PluginManager) => {
8
8
  () =>
9
9
  new AdapterType({
10
10
  name: 'BedpeAdapter',
11
+ displayName: 'BEDPE adapter',
11
12
  configSchema,
12
13
  getAdapterClass: () => import('./BedpeAdapter').then(r => r.default),
13
14
  }),
package/src/BigBedAdapter/index.ts CHANGED
@@ -8,6 +8,7 @@ export default (pluginManager: PluginManager) => {
8
8
  () =>
9
9
  new AdapterType({
10
10
  name: 'BigBedAdapter',
11
+ displayName: 'BigBed adapter',
11
12
  configSchema,
12
13
  getAdapterClass: () => import('./BigBedAdapter').then(r => r.default),
13
14
  }),