@jbrowse/plugin-bed 2.0.1 → 2.1.0
This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
- package/dist/BedAdapter/BedAdapter.d.ts +1 -1
- package/dist/BedTabixAdapter/BedTabixAdapter.js +0 -1
- package/dist/BedTabixAdapter/BedTabixAdapter.js.map +1 -1
- package/dist/BigBedAdapter/BigBedAdapter.d.ts +4 -21
- package/dist/BigBedAdapter/BigBedAdapter.js.map +1 -1
- package/dist/util.d.ts +1 -1
- package/dist/util.js.map +1 -1
- package/esm/BedAdapter/BedAdapter.d.ts +1 -1
- package/esm/BedTabixAdapter/BedTabixAdapter.js +0 -1
- package/esm/BedTabixAdapter/BedTabixAdapter.js.map +1 -1
- package/esm/BigBedAdapter/BigBedAdapter.d.ts +4 -21
- package/esm/BigBedAdapter/BigBedAdapter.js.map +1 -1
- package/esm/util.d.ts +1 -1
- package/esm/util.js.map +1 -1
- package/package.json +4 -4
- package/src/BedAdapter/BedAdapter.ts +1 -1
- package/src/BedTabixAdapter/BedTabixAdapter.ts +1 -2
- package/src/BigBedAdapter/BigBedAdapter.ts +2 -14
- package/src/util.ts +1 -1
- package/src/declare.d.ts +0 -1
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@@ -54,7 +54,6 @@ var __importDefault = (this && this.__importDefault) || function (mod) {
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return (mod && mod.__esModule) ? mod : { "default": mod };
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};
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Object.defineProperty(exports, "__esModule", { value: true });
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-
/* eslint-disable @typescript-eslint/no-explicit-any */
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var bed_1 = __importDefault(require("@gmod/bed"));
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var BaseAdapter_1 = require("@jbrowse/core/data_adapters/BaseAdapter");
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var io_1 = require("@jbrowse/core/util/io");
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@@ -1 +1 @@
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1
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-
{"version":3,"file":"BedTabixAdapter.js","sourceRoot":"","sources":["../../src/BedTabixAdapter/BedTabixAdapter.ts"],"names":[],"mappings":";;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;AAAA,
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1
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+
{"version":3,"file":"BedTabixAdapter.js","sourceRoot":"","sources":["../../src/BedTabixAdapter/BedTabixAdapter.ts"],"names":[],"mappings":";;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;AAAA,kDAA2B;AAC3B,uEAGgD;AAChD,4CAAoD;AACpD,gDAA0D;AAE1D,qCAA8C;AAC9C,gCAAqC;AAKrC;IAA6C,mCAAsB;IAWjE,yBACE,MAA6B,EAC7B,aAAiC,EACjC,aAA6B;QAH/B,YAKE,kBAAM,MAAM,EAAE,aAAa,EAAE,aAAa,CAAC,SAgB5C;QAfC,IAAM,QAAQ,GAAG,KAAI,CAAC,OAAO,CAAC,eAAe,CAAiB,CAAA;QAC9D,IAAM,IAAI,GAAG,KAAI,CAAC,OAAO,CAAC,CAAC,OAAO,EAAE,WAAW,CAAC,CAAC,CAAA;QACjD,IAAM,GAAG,GAAG,KAAI,CAAC,OAAO,CAAC,CAAC,OAAO,EAAE,UAAU,CAAC,CAAC,CAAA;QAC/C,IAAM,OAAO,GAAG,KAAI,CAAC,OAAO,CAAC,SAAS,CAAC,CAAA;QACvC,IAAM,EAAE,GAAG,KAAI,CAAC,aAAa,CAAA;QAE7B,KAAI,CAAC,GAAG,GAAG,IAAI,wBAAgB,CAAC;YAC9B,UAAU,EAAE,IAAA,iBAAY,EAAC,QAAQ,EAAE,EAAE,CAAC;YACtC,aAAa,EAAE,IAAI,KAAK,KAAK,CAAC,CAAC,CAAC,IAAA,iBAAY,EAAC,GAAG,EAAE,EAAE,CAAC,CAAC,CAAC,CAAC,SAAS;YACjE,aAAa,EAAE,IAAI,KAAK,KAAK,CAAC,CAAC,CAAC,IAAA,iBAAY,EAAC,GAAG,EAAE,EAAE,CAAC,CAAC,CAAC,CAAC,SAAS;YACjE,cAAc,EAAE,EAAE,GAAG,SAAA,CAAC,EAAI,EAAE,CAAA;SAC7B,CAAC,CAAA;QACF,KAAI,CAAC,WAAW,GAAG,KAAI,CAAC,OAAO,CAAC,aAAa,CAAC,CAAA;QAC9C,KAAI,CAAC,WAAW,GAAG,KAAI,CAAC,OAAO,CAAC,aAAa,CAAC,CAAA;QAC9C,KAAI,CAAC,MAAM,GAAG,IAAI,aAAG,CAAC,EAAE,OAAO,SAAA,EAAE,CAAC,CAAA;;IACpC,CAAC;IAEY,qCAAW,GAAxB,UAAyB,IAAsB;QAAtB,qBAAA,EAAA,SAAsB;;;gBAC7C,sBAAO,IAAI,CAAC,GAAG,CAAC,yBAAyB,CAAC,IAAI,CAAC,EAAA;;;KAChD;IAEK,mCAAS,GAAf;;;gBACE,sBAAO,IAAI,CAAC,GAAG,CAAC,SAAS,EAAE,EAAA;;;KAC5B;IAEK,kCAAQ,GAAd;;;;;;wBACE,IAAI,IAAI,CAAC,WAAW,CAAC,MAAM,EAAE;4BAC3B,sBAAO,IAAI,CAAC,WAAW,EAAA;yBACxB;wBACc,qBAAM,IAAI,CAAC,GAAG,CAAC,SAAS,EAAE,EAAA;;wBAAnC,MAAM,GAAG,SAA0B;wBACnC,IAAI,GAAG,MAAM,CAAC,KAAK,CAAC,IAAI,CAAC,CAAC,MAAM,CAAC,UAAA,CAAC,IAAI,OAAA,CAAC,CAAC,CAAC,EAAH,CAAG,CAAC,CAAA;wBAC1C,OAAO,GAAG,IAAI,CAAC,IAAI,CAAC,MAAM,GAAG,CAAC,CAAC,CAAA;wBACrC,sBAAO,CAAA,OAAO,aAAP,OAAO,uBAAP,OAAO,CAAE,QAAQ,CAAC,IAAI,CAAC;gCAC5B,CAAC,CAAC,OAAO;qCACJ,KAAK,CAAC,CAAC,CAAC;qCACR,KAAK,CAAC,IAAI,CAAC;qCACX,GAAG,CAAC,UAAA,CAAC,IAAI,OAAA,CAAC,CAAC,IAAI,EAAE,EAAR,CAAQ,CAAC;gCACvB,CAAC,CAAC,SAAS,EAAA;;;;KACd;IAEM,qCAAW,GAAlB,UAAmB,KAAa,EAAE,IAAsB;QAAxD,iBA8BC;QA9BiC,qBAAA,EAAA,SAAsB;QACtD,OAAO,IAAA,uBAAgB,EAAU,UAAM,QAAQ;;;;;4BAChC,qBAAM,IAAI,CAAC,GAAG,CAAC,WAAW,EAAE,EAAA;;wBAAnC,IAAI,GAAG,SAA4B;wBACjC,aAAa,GAAK,IAAI,cAAT,CAAS;wBACxB,MAAM,GAAG,aAAa,CAAC,GAAG,GAAG,CAAC,CAAA;wBAC9B,QAAQ,GAAG,aAAa,CAAC,KAAK,GAAG,CAAC,CAAA;wBAClC,MAAM,GAAG,aAAa,CAAC,GAAG,GAAG,CAAC,CAAA;wBAItB,qBAAM,IAAI,CAAC,QAAQ,EAAE,EAAA;;wBAA7B,KAAK,GAAG,SAAqB;wBACnC,qBAAM,IAAI,CAAC,GAAG,CAAC,QAAQ,CAAC,KAAK,CAAC,OAAO,EAAE,KAAK,CAAC,KAAK,EAAE,KAAK,CAAC,GAAG,EAAE;gCAC7D,YAAY,EAAE,UAAC,IAAI,EAAE,UAAU;oCAC7B,QAAQ,CAAC,IAAI,CACX,IAAA,kBAAW,EACT,IAAI,EACJ,MAAM,EACN,QAAQ,EACR,MAAM,EACN,KAAI,CAAC,WAAW,EAChB,KAAI,CAAC,MAAM,EACX,UAAG,KAAI,CAAC,EAAE,cAAI,UAAU,CAAE,EAC1B,KAAK,CACN,CACF,CAAA;gCACH,CAAC;gCACD,MAAM,EAAE,IAAI,CAAC,MAAM;6BACpB,CAAC,EAAA;;wBAhBF,SAgBE,CAAA;wBACF,QAAQ,CAAC,QAAQ,EAAE,CAAA;;;;aACpB,EAAE,IAAI,CAAC,MAAM,CAAC,CAAA;IACjB,CAAC;IAEM,uCAAa,GAApB,cAA8B,CAAC;IAhFjB,4BAAY,GAAG,CAAC,aAAa,EAAE,aAAa,CAAC,CAAA;IAiF7D,sBAAC;CAAA,AA1FD,CAA6C,oCAAsB,GA0FlE;kBA1FoB,eAAe"}
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@@ -1,35 +1,19 @@
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import { BigBed } from '@gmod/bbi';
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import BED from '@gmod/bed';
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import { BaseFeatureDataAdapter, BaseOptions } from '@jbrowse/core/data_adapters/BaseAdapter';
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import { Region } from '@jbrowse/core/util/types';
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import { Feature } from '@jbrowse/core/util/simpleFeature';
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interface BEDFeature {
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chrom: string;
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chromStart: number;
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chromEnd: number;
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[key: string]: any;
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}
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interface Parser {
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parseLine: (line: string, opts: {
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uniqueId: string | number;
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}) => BEDFeature;
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autoSql: {
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fields: {
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name: string;
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comment: string;
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}[];
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};
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}
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export default class BigBedAdapter extends BaseFeatureDataAdapter {
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private cached?;
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configurePre(opts?: BaseOptions): Promise<{
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bigbed: BigBed;
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header:
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parser:
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header: import("@gmod/bbi").Header;
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parser: BED;
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}>;
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configure(opts?: BaseOptions): Promise<{
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bigbed: BigBed;
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header: any;
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parser:
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parser: BED;
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}>;
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getRefNames(opts?: BaseOptions): Promise<string[]>;
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getHeader(opts?: BaseOptions): Promise<{
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@@ -43,4 +27,3 @@ export default class BigBedAdapter extends BaseFeatureDataAdapter {
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getFeatures(region: Region, opts?: BaseOptions): import("rxjs").Observable<Feature>;
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freeResources(): void;
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}
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export {};
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@@ -1 +1 @@
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-
{"version":3,"file":"BigBedAdapter.js","sourceRoot":"","sources":["../../src/BigBedAdapter/BigBedAdapter.ts"],"names":[],"mappings":";;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;AAAA,uDAAuD;AACvD,iCAAkC;AAClC,kDAA2B;AAC3B,uEAGgD;AAEhD,4CAAoD;AACpD,gDAA0D;AAC1D,mFAAyE;AACzE,4CAA8C;AAC9C,6DAA4D;AAC5D,gCAAiD;AAEjD,SAAS,MAAM,CAAC,CAAU;IACxB,OAAO,CAAC,CAAC,GAAG,CAAC,YAAY,CAAC,IAAI,CAAC,CAAC,GAAG,CAAC,YAAY,CAAC,IAAI,CAAC,CAAC,GAAG,CAAC,QAAQ,CAAC,KAAK,CAAC,CAAA;AAC5E,CAAC;
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{"version":3,"file":"BigBedAdapter.js","sourceRoot":"","sources":["../../src/BigBedAdapter/BigBedAdapter.ts"],"names":[],"mappings":";;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;AAAA,uDAAuD;AACvD,iCAAkC;AAClC,kDAA2B;AAC3B,uEAGgD;AAEhD,4CAAoD;AACpD,gDAA0D;AAC1D,mFAAyE;AACzE,4CAA8C;AAC9C,6DAA4D;AAC5D,gCAAiD;AAEjD,SAAS,MAAM,CAAC,CAAU;IACxB,OAAO,CAAC,CAAC,GAAG,CAAC,YAAY,CAAC,IAAI,CAAC,CAAC,GAAG,CAAC,YAAY,CAAC,IAAI,CAAC,CAAC,GAAG,CAAC,QAAQ,CAAC,KAAK,CAAC,CAAA;AAC5E,CAAC;AAED;IAA2C,iCAAsB;IAAjE;;IA8GA,CAAC;IA3Gc,oCAAY,GAAzB,UAA0B,IAAkB;;;;;;wBACpC,MAAM,GAAG,IAAI,YAAM,CAAC;4BACxB,UAAU,EAAE,IAAA,iBAAY,EACtB,IAAA,8BAAc,EAAC,IAAI,CAAC,MAAM,EAAE,gBAAgB,CAAC,EAC7C,IAAI,CAAC,aAAa,CACnB;yBACF,CAAC,CAAA;wBACa,qBAAM,MAAM,CAAC,SAAS,CAAC,IAAI,CAAC,EAAA;;wBAArC,MAAM,GAAG,SAA4B;wBACrC,MAAM,GAAG,IAAI,aAAG,CAAC,EAAE,OAAO,EAAE,MAAM,CAAC,OAAO,EAAE,CAAC,CAAA;wBACnD,sBAAO,EAAE,MAAM,QAAA,EAAE,MAAM,QAAA,EAAE,MAAM,QAAA,EAAE,EAAA;;;;KAClC;IAEY,iCAAS,GAAtB,UAAuB,IAAkB;;;;gBACvC,IAAI,CAAC,IAAI,CAAC,MAAM,EAAE;oBAChB,IAAI,CAAC,MAAM,GAAG,IAAI,CAAC,YAAY,CAAC,IAAI,CAAC,CAAC,KAAK,CAAC,UAAA,CAAC;wBAC3C,KAAI,CAAC,MAAM,GAAG,SAAS,CAAA;wBACvB,MAAM,CAAC,CAAA;oBACT,CAAC,CAAC,CAAA;iBACH;gBACD,sBAAO,IAAI,CAAC,MAAM,EAAA;;;KACnB;IAEY,mCAAW,GAAxB,UAAyB,IAAkB;;;;;4BACtB,qBAAM,IAAI,CAAC,SAAS,CAAC,IAAI,CAAC,EAAA;;wBAArC,MAAM,GAAK,CAAA,SAA0B,CAAA,OAA/B;wBACd,sBAAO,MAAM,CAAC,IAAI,CAAC,MAAM,CAAC,UAAU,CAAC,EAAA;;;;KACtC;IAEK,iCAAS,GAAf,UAAgB,IAAkB;;;;;4BACL,qBAAM,IAAI,CAAC,SAAS,CAAC,IAAI,CAAC,EAAA;;wBAA/C,KAAqB,SAA0B,EAA7C,MAAM,YAAA,EAAE,MAAM,YAAA;wBACd,OAAO,GAAe,MAAM,QAArB,EAAE,QAAQ,GAAK,MAAM,SAAX,CAAW;wBAC9B,KAAsB,MAAM,CAAC,OAAO,EAAlC,MAAM,YAAA,EAAK,IAAI,cAAjB,UAAmB,CAAF,CAAmB;wBAC1C,sBAAO;gCACL,OAAO,SAAA;gCACP,QAAQ,UAAA;gCACR,OAAO,eAAO,IAAI,CAAE;gCACpB,MAAM,EAAE,MAAM,CAAC,WAAW,CACxB,MAAM,CAAC,GAAG,CAAC,UAAC,EAAiB;wCAAf,IAAI,UAAA,EAAE,OAAO,aAAA;oCAAO,OAAA,CAAC,IAAI,EAAE,OAAO,CAAC;gCAAf,CAAe,CAAC,CACnD;6BACF,EAAA;;;;KACF;IAEM,mCAAW,GAAlB,UAAmB,MAAc,EAAE,IAAsB;QAAzD,iBA+DC;QA/DkC,qBAAA,EAAA,SAAsB;QAC/C,IAAA,OAAO,GAAiB,MAAM,QAAvB,EAAE,KAAK,GAAU,MAAM,MAAhB,EAAE,GAAG,GAAK,MAAM,IAAX,CAAW;QAC9B,IAAA,MAAM,GAAK,IAAI,OAAT,CAAS;QACvB,OAAO,IAAA,uBAAgB,EAAU,UAAM,QAAQ;;;;;;;wBAEhB,qBAAM,IAAI,CAAC,SAAS,CAAC,IAAI,CAAC,EAAA;;wBAA/C,KAAqB,SAA0B,EAA7C,oBAAM,EAAE,MAAM,YAAA;wBACX,qBAAM,MAAM,CAAC,gBAAgB,CAAC,OAAO,EAAE,KAAK,EAAE,GAAG,EAAE;gCAC5D,MAAM,QAAA;gCACN,YAAY,EAAE,GAAG,GAAG,KAAK;6BAC1B,CAAC,EAAA;;wBAHI,EAAE,GAAG,SAGT;wBACF,EAAE,CAAC,IAAI,CACL,IAAA,oBAAQ,GAAE,EACV,IAAA,eAAG,EAAC,UAAA,CAAC;4BACH,IAAM,IAAI,GAAG,QAAM,CAAC,SAAS,CAC3B,UAAG,OAAO,eAAK,CAAC,CAAC,KAAK,eAAK,CAAC,CAAC,GAAG,eAAK,CAAC,CAAC,IAAI,CAAE,EAC7C;gCACE,QAAQ,EAAE,CAAC,CAAC,QAAkB;6BAC/B,CACF,CAAA;4BAEO,IAAA,UAAU,GAA2C,IAAI,WAA/C,EAAE,UAAU,GAA+B,IAAI,WAAnC,EAAE,WAAW,GAAkB,IAAI,YAAtB,EAAE,WAAW,GAAK,IAAI,YAAT,CAAS;4BACjE,IAAI,UAAU,EAAE;gCACd,IAAM,MAAM,GAAG,WAAW,IAAI,WAAW,IAAI,EAAE,CAAA;gCAC/C,IAAM,KAAK,GAAG,UAAU,CAAA;gCACxB,IAAM,YAAY,GAAG,CAAC,CAAC,KAAK,CAAA;gCAC5B,IAAI,CAAC,WAAW,GAAG,EAAE,CAAA;gCAErB,KAAK,IAAI,CAAC,GAAG,CAAC,EAAE,CAAC,GAAG,UAAU,EAAE,CAAC,IAAI,CAAC,EAAE;oCACtC,IAAM,IAAI,GAAG,CAAC,MAAM,CAAC,CAAC,CAAC,IAAI,CAAC,CAAC,GAAG,YAAY,CAAA;oCAC5C,IAAM,IAAI,GAAG,IAAI,GAAG,CAAC,KAAK,CAAC,CAAC,CAAC,IAAI,CAAC,CAAC,CAAA;oCACnC,IAAI,CAAC,WAAW,CAAC,IAAI,CAAC;wCACpB,QAAQ,EAAE,UAAG,CAAC,CAAC,QAAQ,cAAI,CAAC,CAAE;wCAC9B,KAAK,EAAE,IAAI;wCACX,GAAG,EAAE,IAAI;wCACT,IAAI,EAAE,OAAO;qCACd,CAAC,CAAA;iCACH;6BACF;4BACD,IAAI,CAAC,CAAC,QAAQ,KAAK,SAAS,EAAE;gCAC5B,MAAM,IAAI,KAAK,CAAC,qBAAqB,CAAC,CAAA;6BACvC;4BACO,IAAA,UAAU,GAA+B,IAAI,WAAnC,EAAE,QAAQ,GAAqB,IAAI,SAAzB,EAAE,KAAK,GAAc,IAAI,MAAlB,EAAK,IAAI,UAAK,IAAI,EAA/C,mCAAwC,CAAF,CAAS;4BAErD,IAAM,CAAC,GAAG,IAAI,uBAAa,CAAC;gCAC1B,EAAE,EAAE,UAAG,KAAI,CAAC,EAAE,cAAI,CAAC,CAAC,QAAQ,CAAE;gCAC9B,IAAI,wBACC,IAAI,KACP,KAAK,EAAE,CAAC,CAAC,KAAK,EACd,GAAG,EAAE,CAAC,CAAC,GAAG,EACV,OAAO,SAAA,GACR;6BACF,CAAC,CAAA;4BAEF,4DAA4D;4BAC5D,+DAA+D;4BAC/D,6DAA6D;4BAC7D,OAAO,MAAM,CAAC,CAAC,CAAC,CAAC,CAAC,CAAC,IAAA,8BAAuB,EAAC,CAAC,CAAC,CAAC,CAAC,CAAC,CAAC,CAAA;wBACnD,CAAC,CAAC,CACH,CAAC,SAAS,CAAC,QAAQ,CAAC,CAAA;;;;wBAErB,QAAQ,CAAC,KAAK,CAAC,GAAC,CAAC,CAAA;;;;;aAEpB,EAAE,IAAI,CAAC,MAAM,CAAC,CAAA;IACjB,CAAC;IAEM,qCAAa,GAApB,cAA8B,CAAC;IACjC,oBAAC;AAAD,CAAC,AA9GD,CAA2C,oCAAsB,GA8GhE"}
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package/dist/util.d.ts
CHANGED
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import { SimpleFeature, Feature } from '@jbrowse/core/util';
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import BED from '@gmod/bed';
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export declare function ucscProcessedTranscript(feature: Feature): Feature | SimpleFeature;
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export declare function featureData(line: string, colRef: number, colStart: number, colEnd: number, scoreColumn: string, parser:
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export declare function featureData(line: string, colRef: number, colStart: number, colEnd: number, scoreColumn: string, parser: BED, uniqueId: string, names?: string[]): Feature | SimpleFeature;
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package/dist/util.js.map
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|
+
{"version":3,"file":"BedTabixAdapter.js","sourceRoot":"","sources":["../../src/BedTabixAdapter/BedTabixAdapter.ts"],"names":[],"mappings":"AAAA,OAAO,GAAG,MAAM,WAAW,CAAA;AAC3B,OAAO,EACL,sBAAsB,GAEvB,MAAM,yCAAyC,CAAA;AAChD,OAAO,EAAE,YAAY,EAAE,MAAM,uBAAuB,CAAA;AACpD,OAAO,EAAE,gBAAgB,EAAE,MAAM,yBAAyB,CAAA;AAE1D,OAAO,EAAE,gBAAgB,EAAE,MAAM,aAAa,CAAA;AAC9C,OAAO,EAAE,WAAW,EAAE,MAAM,SAAS,CAAA;AAKrC,MAAM,CAAC,OAAO,OAAO,eAAgB,SAAQ,sBAAsB;IAWjE,YACE,MAA6B,EAC7B,aAAiC,EACjC,aAA6B;QAE7B,KAAK,CAAC,MAAM,EAAE,aAAa,EAAE,aAAa,CAAC,CAAA;QAC3C,MAAM,QAAQ,GAAG,IAAI,CAAC,OAAO,CAAC,eAAe,CAAiB,CAAA;QAC9D,MAAM,IAAI,GAAG,IAAI,CAAC,OAAO,CAAC,CAAC,OAAO,EAAE,WAAW,CAAC,CAAC,CAAA;QACjD,MAAM,GAAG,GAAG,IAAI,CAAC,OAAO,CAAC,CAAC,OAAO,EAAE,UAAU,CAAC,CAAC,CAAA;QAC/C,MAAM,OAAO,GAAG,IAAI,CAAC,OAAO,CAAC,SAAS,CAAC,CAAA;QACvC,MAAM,EAAE,GAAG,IAAI,CAAC,aAAa,CAAA;QAE7B,IAAI,CAAC,GAAG,GAAG,IAAI,gBAAgB,CAAC;YAC9B,UAAU,EAAE,YAAY,CAAC,QAAQ,EAAE,EAAE,CAAC;YACtC,aAAa,EAAE,IAAI,KAAK,KAAK,CAAC,CAAC,CAAC,YAAY,CAAC,GAAG,EAAE,EAAE,CAAC,CAAC,CAAC,CAAC,SAAS;YACjE,aAAa,EAAE,IAAI,KAAK,KAAK,CAAC,CAAC,CAAC,YAAY,CAAC,GAAG,EAAE,EAAE,CAAC,CAAC,CAAC,CAAC,SAAS;YACjE,cAAc,EAAE,EAAE,GAAG,CAAC,IAAI,EAAE;SAC7B,CAAC,CAAA;QACF,IAAI,CAAC,WAAW,GAAG,IAAI,CAAC,OAAO,CAAC,aAAa,CAAC,CAAA;QAC9C,IAAI,CAAC,WAAW,GAAG,IAAI,CAAC,OAAO,CAAC,aAAa,CAAC,CAAA;QAC9C,IAAI,CAAC,MAAM,GAAG,IAAI,GAAG,CAAC,EAAE,OAAO,EAAE,CAAC,CAAA;IACpC,CAAC;IAEM,KAAK,CAAC,WAAW,CAAC,OAAoB,EAAE;QAC7C,OAAO,IAAI,CAAC,GAAG,CAAC,yBAAyB,CAAC,IAAI,CAAC,CAAA;IACjD,CAAC;IAED,KAAK,CAAC,SAAS;QACb,OAAO,IAAI,CAAC,GAAG,CAAC,SAAS,EAAE,CAAA;IAC7B,CAAC;IAED,KAAK,CAAC,QAAQ;QACZ,IAAI,IAAI,CAAC,WAAW,CAAC,MAAM,EAAE;YAC3B,OAAO,IAAI,CAAC,WAAW,CAAA;SACxB;QACD,MAAM,MAAM,GAAG,MAAM,IAAI,CAAC,GAAG,CAAC,SAAS,EAAE,CAAA;QACzC,MAAM,IAAI,GAAG,MAAM,CAAC,KAAK,CAAC,IAAI,CAAC,CAAC,MAAM,CAAC,CAAC,CAAC,EAAE,CAAC,CAAC,CAAC,CAAC,CAAC,CAAA;QAChD,MAAM,OAAO,GAAG,IAAI,CAAC,IAAI,CAAC,MAAM,GAAG,CAAC,CAAC,CAAA;QACrC,OAAO,CAAA,OAAO,aAAP,OAAO,uBAAP,OAAO,CAAE,QAAQ,CAAC,IAAI,CAAC;YAC5B,CAAC,CAAC,OAAO;iBACJ,KAAK,CAAC,CAAC,CAAC;iBACR,KAAK,CAAC,IAAI,CAAC;iBACX,GAAG,CAAC,CAAC,CAAC,EAAE,CAAC,CAAC,CAAC,IAAI,EAAE,CAAC;YACvB,CAAC,CAAC,SAAS,CAAA;IACf,CAAC;IAEM,WAAW,CAAC,KAAa,EAAE,OAAoB,EAAE;QACtD,OAAO,gBAAgB,CAAU,KAAK,EAAC,QAAQ,EAAC,EAAE;YAChD,MAAM,IAAI,GAAG,MAAM,IAAI,CAAC,GAAG,CAAC,WAAW,EAAE,CAAA;YACzC,MAAM,EAAE,aAAa,EAAE,GAAG,IAAI,CAAA;YAC9B,MAAM,MAAM,GAAG,aAAa,CAAC,GAAG,GAAG,CAAC,CAAA;YACpC,MAAM,QAAQ,GAAG,aAAa,CAAC,KAAK,GAAG,CAAC,CAAA;YACxC,MAAM,MAAM,GAAG,aAAa,CAAC,GAAG,GAAG,CAAC,CAAA;YACpC,uEAAuE;YACvE,qEAAqE;YACrE,8DAA8D;YAC9D,MAAM,KAAK,GAAG,MAAM,IAAI,CAAC,QAAQ,EAAE,CAAA;YACnC,MAAM,IAAI,CAAC,GAAG,CAAC,QAAQ,CAAC,KAAK,CAAC,OAAO,EAAE,KAAK,CAAC,KAAK,EAAE,KAAK,CAAC,GAAG,EAAE;gBAC7D,YAAY,EAAE,CAAC,IAAI,EAAE,UAAU,EAAE,EAAE;oBACjC,QAAQ,CAAC,IAAI,CACX,WAAW,CACT,IAAI,EACJ,MAAM,EACN,QAAQ,EACR,MAAM,EACN,IAAI,CAAC,WAAW,EAChB,IAAI,CAAC,MAAM,EACX,GAAG,IAAI,CAAC,EAAE,IAAI,UAAU,EAAE,EAC1B,KAAK,CACN,CACF,CAAA;gBACH,CAAC;gBACD,MAAM,EAAE,IAAI,CAAC,MAAM;aACpB,CAAC,CAAA;YACF,QAAQ,CAAC,QAAQ,EAAE,CAAA;QACrB,CAAC,EAAE,IAAI,CAAC,MAAM,CAAC,CAAA;IACjB,CAAC;IAEM,aAAa,KAAU,CAAC;;AAhFjB,4BAAY,GAAG,CAAC,aAAa,EAAE,aAAa,CAAC,CAAA"}
|
|
@@ -1,35 +1,19 @@
|
|
|
1
1
|
import { BigBed } from '@gmod/bbi';
|
|
2
|
+
import BED from '@gmod/bed';
|
|
2
3
|
import { BaseFeatureDataAdapter, BaseOptions } from '@jbrowse/core/data_adapters/BaseAdapter';
|
|
3
4
|
import { Region } from '@jbrowse/core/util/types';
|
|
4
5
|
import { Feature } from '@jbrowse/core/util/simpleFeature';
|
|
5
|
-
interface BEDFeature {
|
|
6
|
-
chrom: string;
|
|
7
|
-
chromStart: number;
|
|
8
|
-
chromEnd: number;
|
|
9
|
-
[key: string]: any;
|
|
10
|
-
}
|
|
11
|
-
interface Parser {
|
|
12
|
-
parseLine: (line: string, opts: {
|
|
13
|
-
uniqueId: string | number;
|
|
14
|
-
}) => BEDFeature;
|
|
15
|
-
autoSql: {
|
|
16
|
-
fields: {
|
|
17
|
-
name: string;
|
|
18
|
-
comment: string;
|
|
19
|
-
}[];
|
|
20
|
-
};
|
|
21
|
-
}
|
|
22
6
|
export default class BigBedAdapter extends BaseFeatureDataAdapter {
|
|
23
7
|
private cached?;
|
|
24
8
|
configurePre(opts?: BaseOptions): Promise<{
|
|
25
9
|
bigbed: BigBed;
|
|
26
|
-
header:
|
|
27
|
-
parser:
|
|
10
|
+
header: import("@gmod/bbi").Header;
|
|
11
|
+
parser: BED;
|
|
28
12
|
}>;
|
|
29
13
|
configure(opts?: BaseOptions): Promise<{
|
|
30
14
|
bigbed: BigBed;
|
|
31
15
|
header: any;
|
|
32
|
-
parser:
|
|
16
|
+
parser: BED;
|
|
33
17
|
}>;
|
|
34
18
|
getRefNames(opts?: BaseOptions): Promise<string[]>;
|
|
35
19
|
getHeader(opts?: BaseOptions): Promise<{
|
|
@@ -43,4 +27,3 @@ export default class BigBedAdapter extends BaseFeatureDataAdapter {
|
|
|
43
27
|
getFeatures(region: Region, opts?: BaseOptions): import("rxjs").Observable<Feature>;
|
|
44
28
|
freeResources(): void;
|
|
45
29
|
}
|
|
46
|
-
export {};
|
|
@@ -1 +1 @@
|
|
|
1
|
-
{"version":3,"file":"BigBedAdapter.js","sourceRoot":"","sources":["../../src/BigBedAdapter/BigBedAdapter.ts"],"names":[],"mappings":"AAAA,uDAAuD;AACvD,OAAO,EAAE,MAAM,EAAE,MAAM,WAAW,CAAA;AAClC,OAAO,GAAG,MAAM,WAAW,CAAA;AAC3B,OAAO,EACL,sBAAsB,GAEvB,MAAM,yCAAyC,CAAA;AAEhD,OAAO,EAAE,YAAY,EAAE,MAAM,uBAAuB,CAAA;AACpD,OAAO,EAAE,gBAAgB,EAAE,MAAM,yBAAyB,CAAA;AAC1D,OAAO,aAA0B,MAAM,kCAAkC,CAAA;AACzE,OAAO,EAAE,GAAG,EAAE,QAAQ,EAAE,MAAM,gBAAgB,CAAA;AAC9C,OAAO,EAAE,cAAc,EAAE,MAAM,6BAA6B,CAAA;AAC5D,OAAO,EAAE,uBAAuB,EAAE,MAAM,SAAS,CAAA;AAEjD,SAAS,MAAM,CAAC,CAAU;IACxB,OAAO,CAAC,CAAC,GAAG,CAAC,YAAY,CAAC,IAAI,CAAC,CAAC,GAAG,CAAC,YAAY,CAAC,IAAI,CAAC,CAAC,GAAG,CAAC,QAAQ,CAAC,KAAK,CAAC,CAAA;AAC5E,CAAC;
|
|
1
|
+
{"version":3,"file":"BigBedAdapter.js","sourceRoot":"","sources":["../../src/BigBedAdapter/BigBedAdapter.ts"],"names":[],"mappings":"AAAA,uDAAuD;AACvD,OAAO,EAAE,MAAM,EAAE,MAAM,WAAW,CAAA;AAClC,OAAO,GAAG,MAAM,WAAW,CAAA;AAC3B,OAAO,EACL,sBAAsB,GAEvB,MAAM,yCAAyC,CAAA;AAEhD,OAAO,EAAE,YAAY,EAAE,MAAM,uBAAuB,CAAA;AACpD,OAAO,EAAE,gBAAgB,EAAE,MAAM,yBAAyB,CAAA;AAC1D,OAAO,aAA0B,MAAM,kCAAkC,CAAA;AACzE,OAAO,EAAE,GAAG,EAAE,QAAQ,EAAE,MAAM,gBAAgB,CAAA;AAC9C,OAAO,EAAE,cAAc,EAAE,MAAM,6BAA6B,CAAA;AAC5D,OAAO,EAAE,uBAAuB,EAAE,MAAM,SAAS,CAAA;AAEjD,SAAS,MAAM,CAAC,CAAU;IACxB,OAAO,CAAC,CAAC,GAAG,CAAC,YAAY,CAAC,IAAI,CAAC,CAAC,GAAG,CAAC,YAAY,CAAC,IAAI,CAAC,CAAC,GAAG,CAAC,QAAQ,CAAC,KAAK,CAAC,CAAA;AAC5E,CAAC;AAED,MAAM,CAAC,OAAO,OAAO,aAAc,SAAQ,sBAAsB;IAGxD,KAAK,CAAC,YAAY,CAAC,IAAkB;QAC1C,MAAM,MAAM,GAAG,IAAI,MAAM,CAAC;YACxB,UAAU,EAAE,YAAY,CACtB,cAAc,CAAC,IAAI,CAAC,MAAM,EAAE,gBAAgB,CAAC,EAC7C,IAAI,CAAC,aAAa,CACnB;SACF,CAAC,CAAA;QACF,MAAM,MAAM,GAAG,MAAM,MAAM,CAAC,SAAS,CAAC,IAAI,CAAC,CAAA;QAC3C,MAAM,MAAM,GAAG,IAAI,GAAG,CAAC,EAAE,OAAO,EAAE,MAAM,CAAC,OAAO,EAAE,CAAC,CAAA;QACnD,OAAO,EAAE,MAAM,EAAE,MAAM,EAAE,MAAM,EAAE,CAAA;IACnC,CAAC;IAEM,KAAK,CAAC,SAAS,CAAC,IAAkB;QACvC,IAAI,CAAC,IAAI,CAAC,MAAM,EAAE;YAChB,IAAI,CAAC,MAAM,GAAG,IAAI,CAAC,YAAY,CAAC,IAAI,CAAC,CAAC,KAAK,CAAC,CAAC,CAAC,EAAE;gBAC9C,IAAI,CAAC,MAAM,GAAG,SAAS,CAAA;gBACvB,MAAM,CAAC,CAAA;YACT,CAAC,CAAC,CAAA;SACH;QACD,OAAO,IAAI,CAAC,MAAM,CAAA;IACpB,CAAC;IAEM,KAAK,CAAC,WAAW,CAAC,IAAkB;QACzC,MAAM,EAAE,MAAM,EAAE,GAAG,MAAM,IAAI,CAAC,SAAS,CAAC,IAAI,CAAC,CAAA;QAC7C,OAAO,MAAM,CAAC,IAAI,CAAC,MAAM,CAAC,UAAU,CAAC,CAAA;IACvC,CAAC;IAED,KAAK,CAAC,SAAS,CAAC,IAAkB;QAChC,MAAM,EAAE,MAAM,EAAE,MAAM,EAAE,GAAG,MAAM,IAAI,CAAC,SAAS,CAAC,IAAI,CAAC,CAAA;QACrD,MAAM,EAAE,OAAO,EAAE,QAAQ,EAAE,GAAG,MAAM,CAAA;QACpC,MAAM,EAAE,MAAM,EAAE,GAAG,IAAI,EAAE,GAAG,MAAM,CAAC,OAAO,CAAA;QAC1C,OAAO;YACL,OAAO;YACP,QAAQ;YACR,OAAO,EAAE,EAAE,GAAG,IAAI,EAAE;YACpB,MAAM,EAAE,MAAM,CAAC,WAAW,CACxB,MAAM,CAAC,GAAG,CAAC,CAAC,EAAE,IAAI,EAAE,OAAO,EAAE,EAAE,EAAE,CAAC,CAAC,IAAI,EAAE,OAAO,CAAC,CAAC,CACnD;SACF,CAAA;IACH,CAAC;IAEM,WAAW,CAAC,MAAc,EAAE,OAAoB,EAAE;QACvD,MAAM,EAAE,OAAO,EAAE,KAAK,EAAE,GAAG,EAAE,GAAG,MAAM,CAAA;QACtC,MAAM,EAAE,MAAM,EAAE,GAAG,IAAI,CAAA;QACvB,OAAO,gBAAgB,CAAU,KAAK,EAAC,QAAQ,EAAC,EAAE;YAChD,IAAI;gBACF,MAAM,EAAE,MAAM,EAAE,MAAM,EAAE,GAAG,MAAM,IAAI,CAAC,SAAS,CAAC,IAAI,CAAC,CAAA;gBACrD,MAAM,EAAE,GAAG,MAAM,MAAM,CAAC,gBAAgB,CAAC,OAAO,EAAE,KAAK,EAAE,GAAG,EAAE;oBAC5D,MAAM;oBACN,YAAY,EAAE,GAAG,GAAG,KAAK;iBAC1B,CAAC,CAAA;gBACF,EAAE,CAAC,IAAI,CACL,QAAQ,EAAE,EACV,GAAG,CAAC,CAAC,CAAC,EAAE;oBACN,MAAM,IAAI,GAAG,MAAM,CAAC,SAAS,CAC3B,GAAG,OAAO,KAAK,CAAC,CAAC,KAAK,KAAK,CAAC,CAAC,GAAG,KAAK,CAAC,CAAC,IAAI,EAAE,EAC7C;wBACE,QAAQ,EAAE,CAAC,CAAC,QAAkB;qBAC/B,CACF,CAAA;oBAED,MAAM,EAAE,UAAU,EAAE,UAAU,EAAE,WAAW,EAAE,WAAW,EAAE,GAAG,IAAI,CAAA;oBACjE,IAAI,UAAU,EAAE;wBACd,MAAM,MAAM,GAAG,WAAW,IAAI,WAAW,IAAI,EAAE,CAAA;wBAC/C,MAAM,KAAK,GAAG,UAAU,CAAA;wBACxB,MAAM,YAAY,GAAG,CAAC,CAAC,KAAK,CAAA;wBAC5B,IAAI,CAAC,WAAW,GAAG,EAAE,CAAA;wBAErB,KAAK,IAAI,CAAC,GAAG,CAAC,EAAE,CAAC,GAAG,UAAU,EAAE,CAAC,IAAI,CAAC,EAAE;4BACtC,MAAM,IAAI,GAAG,CAAC,MAAM,CAAC,CAAC,CAAC,IAAI,CAAC,CAAC,GAAG,YAAY,CAAA;4BAC5C,MAAM,IAAI,GAAG,IAAI,GAAG,CAAC,KAAK,CAAC,CAAC,CAAC,IAAI,CAAC,CAAC,CAAA;4BACnC,IAAI,CAAC,WAAW,CAAC,IAAI,CAAC;gCACpB,QAAQ,EAAE,GAAG,CAAC,CAAC,QAAQ,IAAI,CAAC,EAAE;gCAC9B,KAAK,EAAE,IAAI;gCACX,GAAG,EAAE,IAAI;gCACT,IAAI,EAAE,OAAO;6BACd,CAAC,CAAA;yBACH;qBACF;oBACD,IAAI,CAAC,CAAC,QAAQ,KAAK,SAAS,EAAE;wBAC5B,MAAM,IAAI,KAAK,CAAC,qBAAqB,CAAC,CAAA;qBACvC;oBACD,MAAM,EAAE,UAAU,EAAE,QAAQ,EAAE,KAAK,EAAE,GAAG,IAAI,EAAE,GAAG,IAAI,CAAA;oBAErD,MAAM,CAAC,GAAG,IAAI,aAAa,CAAC;wBAC1B,EAAE,EAAE,GAAG,IAAI,CAAC,EAAE,IAAI,CAAC,CAAC,QAAQ,EAAE;wBAC9B,IAAI,EAAE;4BACJ,GAAG,IAAI;4BACP,KAAK,EAAE,CAAC,CAAC,KAAK;4BACd,GAAG,EAAE,CAAC,CAAC,GAAG;4BACV,OAAO;yBACR;qBACF,CAAC,CAAA;oBAEF,4DAA4D;oBAC5D,+DAA+D;oBAC/D,6DAA6D;oBAC7D,OAAO,MAAM,CAAC,CAAC,CAAC,CAAC,CAAC,CAAC,uBAAuB,CAAC,CAAC,CAAC,CAAC,CAAC,CAAC,CAAC,CAAA;gBACnD,CAAC,CAAC,CACH,CAAC,SAAS,CAAC,QAAQ,CAAC,CAAA;aACtB;YAAC,OAAO,CAAC,EAAE;gBACV,QAAQ,CAAC,KAAK,CAAC,CAAC,CAAC,CAAA;aAClB;QACH,CAAC,EAAE,IAAI,CAAC,MAAM,CAAC,CAAA;IACjB,CAAC;IAEM,aAAa,KAAU,CAAC;CAChC"}
|
package/esm/util.d.ts
CHANGED
|
@@ -1,4 +1,4 @@
|
|
|
1
1
|
import { SimpleFeature, Feature } from '@jbrowse/core/util';
|
|
2
2
|
import BED from '@gmod/bed';
|
|
3
3
|
export declare function ucscProcessedTranscript(feature: Feature): Feature | SimpleFeature;
|
|
4
|
-
export declare function featureData(line: string, colRef: number, colStart: number, colEnd: number, scoreColumn: string, parser:
|
|
4
|
+
export declare function featureData(line: string, colRef: number, colStart: number, colEnd: number, scoreColumn: string, parser: BED, uniqueId: string, names?: string[]): Feature | SimpleFeature;
|
package/esm/util.js.map
CHANGED
|
@@ -1 +1 @@
|
|
|
1
|
-
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|
|
1
|
+
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;IACD,OAAO,IAAI,CAAC,KAAK,CAAA;IACjB,OAAO,IAAI,CAAC,UAAU,CAAA;IACtB,OAAO,IAAI,CAAC,QAAQ,CAAA;IACpB,MAAM,CAAC,GAAG,IAAI,aAAa,CAAC;QAC1B,GAAG,IAAI;QACP,KAAK;QACL,GAAG;QACH,OAAO;QACP,QAAQ;KACT,CAAC,CAAA;IACF,OAAO,CAAC,CAAC,GAAG,CAAC,YAAY,CAAC,CAAC,CAAC,CAAC,uBAAuB,CAAC,CAAC,CAAC,CAAC,CAAC,CAAC,CAAC,CAAA;AAC7D,CAAC"}
|
package/package.json
CHANGED
|
@@ -1,6 +1,6 @@
|
|
|
1
1
|
{
|
|
2
2
|
"name": "@jbrowse/plugin-bed",
|
|
3
|
-
"version": "2.0
|
|
3
|
+
"version": "2.1.0",
|
|
4
4
|
"description": "JBrowse 2 bed adapters, tracks, etc.",
|
|
5
5
|
"keywords": [
|
|
6
6
|
"jbrowse",
|
|
@@ -39,8 +39,8 @@
|
|
|
39
39
|
"dependencies": {
|
|
40
40
|
"@babel/runtime": "^7.17.9",
|
|
41
41
|
"@flatten-js/interval-tree": "^1.0.15",
|
|
42
|
-
"@gmod/bbi": "^
|
|
43
|
-
"@gmod/bed": "^2.
|
|
42
|
+
"@gmod/bbi": "^2.0.2",
|
|
43
|
+
"@gmod/bed": "^2.1.2",
|
|
44
44
|
"@gmod/bgzf-filehandle": "^1.4.3",
|
|
45
45
|
"@gmod/tabix": "^1.5.2"
|
|
46
46
|
},
|
|
@@ -57,5 +57,5 @@
|
|
|
57
57
|
"distModule": "esm/index.js",
|
|
58
58
|
"srcModule": "src/index.ts",
|
|
59
59
|
"module": "esm/index.js",
|
|
60
|
-
"gitHead": "
|
|
60
|
+
"gitHead": "0db0462fa1f9f15ab4869da085bcab032b9483c3"
|
|
61
61
|
}
|
|
@@ -18,7 +18,7 @@ export default class BedAdapter extends BaseFeatureDataAdapter {
|
|
|
18
18
|
protected bedFeatures?: Promise<{
|
|
19
19
|
header: string
|
|
20
20
|
features: Record<string, string[]>
|
|
21
|
-
parser:
|
|
21
|
+
parser: BED
|
|
22
22
|
columnNames: string[]
|
|
23
23
|
scoreColumn: string
|
|
24
24
|
colRef: number
|
|
@@ -1,4 +1,3 @@
|
|
|
1
|
-
/* eslint-disable @typescript-eslint/no-explicit-any */
|
|
2
1
|
import BED from '@gmod/bed'
|
|
3
2
|
import {
|
|
4
3
|
BaseFeatureDataAdapter,
|
|
@@ -14,7 +13,7 @@ import { AnyConfigurationModel } from '@jbrowse/core/configuration'
|
|
|
14
13
|
import { getSubAdapterType } from '@jbrowse/core/data_adapters/dataAdapterCache'
|
|
15
14
|
|
|
16
15
|
export default class BedTabixAdapter extends BaseFeatureDataAdapter {
|
|
17
|
-
private parser:
|
|
16
|
+
private parser: BED
|
|
18
17
|
|
|
19
18
|
protected bed: TabixIndexedFile
|
|
20
19
|
|
|
@@ -17,20 +17,8 @@ function isUCSC(f: Feature) {
|
|
|
17
17
|
return f.get('thickStart') && f.get('blockCount') && f.get('strand') !== 0
|
|
18
18
|
}
|
|
19
19
|
|
|
20
|
-
interface BEDFeature {
|
|
21
|
-
chrom: string
|
|
22
|
-
chromStart: number
|
|
23
|
-
chromEnd: number
|
|
24
|
-
[key: string]: any
|
|
25
|
-
}
|
|
26
|
-
|
|
27
|
-
interface Parser {
|
|
28
|
-
parseLine: (line: string, opts: { uniqueId: string | number }) => BEDFeature
|
|
29
|
-
autoSql: { fields: { name: string; comment: string }[] }
|
|
30
|
-
}
|
|
31
|
-
|
|
32
20
|
export default class BigBedAdapter extends BaseFeatureDataAdapter {
|
|
33
|
-
private cached?: Promise<{ bigbed: BigBed; header: any; parser:
|
|
21
|
+
private cached?: Promise<{ bigbed: BigBed; header: any; parser: BED }>
|
|
34
22
|
|
|
35
23
|
public async configurePre(opts?: BaseOptions) {
|
|
36
24
|
const bigbed = new BigBed({
|
|
@@ -40,7 +28,7 @@ export default class BigBedAdapter extends BaseFeatureDataAdapter {
|
|
|
40
28
|
),
|
|
41
29
|
})
|
|
42
30
|
const header = await bigbed.getHeader(opts)
|
|
43
|
-
const parser = new BED({ autoSql: header.autoSql })
|
|
31
|
+
const parser = new BED({ autoSql: header.autoSql })
|
|
44
32
|
return { bigbed, header, parser }
|
|
45
33
|
}
|
|
46
34
|
|
package/src/util.ts
CHANGED
package/src/declare.d.ts
DELETED
|
@@ -1 +0,0 @@
|
|
|
1
|
-
declare module '@gmod/bed'
|