@jbrowse/plugin-bed 1.7.10 → 2.0.1

package/dist/BigBedAdapter/BigBedAdapter.test.js

@@ -1,63 +0,0 @@
-"use strict";
-
-var _interopRequireDefault = require("@babel/runtime/helpers/interopRequireDefault");
-
-var _regenerator = _interopRequireDefault(require("@babel/runtime/regenerator"));
-
-var _asyncToGenerator2 = _interopRequireDefault(require("@babel/runtime/helpers/asyncToGenerator"));
-
-var _operators = require("rxjs/operators");
-
-var _BigBedAdapter = _interopRequireDefault(require("./BigBedAdapter"));
-
-var _configSchema = _interopRequireDefault(require("./configSchema"));
-
-test('adapter can fetch features from volvox.bb', /*#__PURE__*/(0, _asyncToGenerator2.default)( /*#__PURE__*/_regenerator.default.mark(function _callee() {
-  var adapter, features, featuresArray, featuresJsonArray;
-  return _regenerator.default.wrap(function _callee$(_context) {
-    while (1) {
-      switch (_context.prev = _context.next) {
-        case 0:
-          adapter = new _BigBedAdapter.default(_configSchema.default.create({
-            bigBedLocation: {
-              localPath: require.resolve('./test_data/volvox.bb'),
-              locationType: 'LocalPathLocation'
-            }
-          }));
-          features = adapter.getFeatures({
-            assemblyName: 'volvox',
-            refName: 'ctgA',
-            start: 0,
-            end: 20000
-          });
-          _context.t0 = expect;
-          _context.next = 5;
-          return adapter.hasDataForRefName('ctgA');
-
-        case 5:
-          _context.t1 = _context.sent;
-          (0, _context.t0)(_context.t1).toBe(true);
-          _context.t2 = expect;
-          _context.next = 10;
-          return adapter.hasDataForRefName('ctgB');
-
-        case 10:
-          _context.t3 = _context.sent;
-          (0, _context.t2)(_context.t3).toBe(false);
-          _context.next = 14;
-          return features.pipe((0, _operators.toArray)()).toPromise();
-
-        case 14:
-          featuresArray = _context.sent;
-          featuresJsonArray = featuresArray.map(function (f) {
-            return f.toJSON();
-          });
-          expect(featuresJsonArray).toMatchSnapshot();
-
-        case 17:
-        case "end":
-          return _context.stop();
-      }
-    }
-  }, _callee);
-})));

package/dist/declare.d.js

@@ -1 +0,0 @@
-"use strict";

package/dist/index.test.js

@@ -1,24 +0,0 @@
-"use strict";
-
-var _interopRequireDefault = require("@babel/runtime/helpers/interopRequireDefault");
-
-var _PluginManager = _interopRequireDefault(require("@jbrowse/core/PluginManager"));
-
-var _mobxStateTree = require("mobx-state-tree");
-
-var _ = _interopRequireDefault(require("."));
-
-test('plugin in a stock JBrowse', function () {
-  console.warn = jest.fn();
-  var pluginManager = new _PluginManager.default([new _.default()]);
-  pluginManager.createPluggableElements();
-  pluginManager.configure();
-  expect(function () {
-    return pluginManager.addPlugin(new _.default());
-  }).toThrow(/JBrowse already configured, cannot add plugins/);
-  var BigBedAdapter = pluginManager.getAdapterType('BigBedAdapter');
-  var config = BigBedAdapter.configSchema.create({
-    type: 'BigBedAdapter'
-  });
-  expect((0, _mobxStateTree.getSnapshot)(config)).toMatchSnapshot();
-});