@jbrowse/plugin-alignments 4.1.1 → 4.1.4

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Files changed (52) hide show
  1. package/esm/AlignmentsFeatureDetail/configSchema.d.ts +1 -1
  2. package/esm/AlignmentsFeatureDetail/stateModelFactory.d.ts +3 -3
  3. package/esm/AlignmentsTrack/configSchemaF.d.ts +8 -8
  4. package/esm/BamAdapter/configSchema.d.ts +4 -4
  5. package/esm/CramAdapter/configSchema.d.ts +2 -2
  6. package/esm/HtsgetBamAdapter/configSchema.d.ts +2 -2
  7. package/esm/LinearAlignmentsDisplay/configSchema.d.ts +3 -3
  8. package/esm/LinearPileupDisplay/SharedLinearPileupDisplayMixin.d.ts +22 -10
  9. package/esm/LinearPileupDisplay/configSchema.d.ts +6 -6
  10. package/esm/LinearPileupDisplay/model.d.ts +22 -10
  11. package/esm/LinearReadArcsDisplay/configSchema.d.ts +4 -4
  12. package/esm/LinearReadCloudDisplay/configSchema.d.ts +4 -4
  13. package/esm/LinearSNPCoverageDisplay/configSchema.d.ts +5 -5
  14. package/esm/LinearSNPCoverageDisplay/model.d.ts +12 -6
  15. package/esm/PileupRenderer/configSchema.d.ts +2 -2
  16. package/esm/PileupRenderer/makeImageData.js +3 -4
  17. package/esm/RenderLinearReadArcsDisplayRPC/drawFeatsRPC.d.ts +2 -1
  18. package/esm/RenderLinearReadArcsDisplayRPC/drawFeatsRPC.js +3 -4
  19. package/esm/RenderLinearReadArcsDisplayRPC/executeRenderLinearReadArcsDisplay.js +5 -4
  20. package/esm/RenderLinearReadCloudDisplayRPC/drawFeatsCommon.d.ts +2 -2
  21. package/esm/RenderLinearReadCloudDisplayRPC/drawFeatsCommon.js +3 -3
  22. package/esm/RenderLinearReadCloudDisplayRPC/drawLongReadChains.d.ts +3 -2
  23. package/esm/RenderLinearReadCloudDisplayRPC/drawLongReadChains.js +3 -4
  24. package/esm/RenderLinearReadCloudDisplayRPC/drawPairChains.d.ts +3 -2
  25. package/esm/RenderLinearReadCloudDisplayRPC/drawPairChains.js +4 -5
  26. package/esm/RenderLinearReadCloudDisplayRPC/executeRenderLinearReadCloudDisplay.js +5 -4
  27. package/esm/SNPCoverageAdapter/configSchema.d.ts +2 -2
  28. package/esm/SNPCoverageRenderer/buildClickMap.d.ts +5 -0
  29. package/esm/SNPCoverageRenderer/buildClickMap.js +17 -0
  30. package/esm/SNPCoverageRenderer/calculateModificationCounts.d.ts +1 -19
  31. package/esm/SNPCoverageRenderer/calculateModificationCounts.js +1 -6
  32. package/esm/SNPCoverageRenderer/configSchema.d.ts +2 -2
  33. package/esm/SNPCoverageRenderer/constants.d.ts +12 -0
  34. package/esm/SNPCoverageRenderer/constants.js +12 -0
  35. package/esm/SNPCoverageRenderer/createInterbaseItem.d.ts +7 -0
  36. package/esm/SNPCoverageRenderer/createInterbaseItem.js +13 -0
  37. package/esm/SNPCoverageRenderer/drawCrossHatches.d.ts +3 -0
  38. package/esm/SNPCoverageRenderer/drawCrossHatches.js +10 -0
  39. package/esm/SNPCoverageRenderer/drawNoncovEvents.d.ts +3 -0
  40. package/esm/SNPCoverageRenderer/drawNoncovEvents.js +56 -0
  41. package/esm/SNPCoverageRenderer/drawSecondPassMethylation.d.ts +2 -0
  42. package/esm/SNPCoverageRenderer/drawSecondPassMethylation.js +30 -0
  43. package/esm/SNPCoverageRenderer/drawSecondPassModifications.d.ts +6 -0
  44. package/esm/SNPCoverageRenderer/drawSecondPassModifications.js +85 -0
  45. package/esm/SNPCoverageRenderer/drawSecondPassSNPs.d.ts +2 -0
  46. package/esm/SNPCoverageRenderer/drawSecondPassSNPs.js +64 -0
  47. package/esm/SNPCoverageRenderer/drawStackedBars.d.ts +3 -0
  48. package/esm/SNPCoverageRenderer/drawStackedBars.js +10 -0
  49. package/esm/SNPCoverageRenderer/makeImage.d.ts +1 -1
  50. package/esm/SNPCoverageRenderer/makeImage.js +10 -306
  51. package/esm/SNPCoverageRenderer/types.d.ts +62 -1
  52. package/package.json +8 -8
package/esm/AlignmentsFeatureDetail/configSchema.d.ts CHANGED
@@ -1 +1 @@
1
- export declare const configSchema: import("node_modules/@jbrowse/core/src/configuration/configurationSchema").ConfigurationSchemaType<{}, import("node_modules/@jbrowse/core/src/configuration/configurationSchema").ConfigurationSchemaOptions<undefined, undefined>>;
1
+ export declare const configSchema: import("@jbrowse/core/configuration/configurationSchema").ConfigurationSchemaType<{}, import("@jbrowse/core/configuration/configurationSchema").ConfigurationSchemaOptions<undefined, undefined>>;
package/esm/AlignmentsFeatureDetail/stateModelFactory.d.ts CHANGED
@@ -33,7 +33,7 @@ export declare function stateModelFactory(pluginManager: PluginManager): import(
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  readonly hasExon: boolean | undefined;
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  readonly hasExonOrCDS: boolean | undefined;
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  } & {
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- afterAttach(): void;
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+ afterCreate(): void;
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  }, import("@jbrowse/mobx-state-tree")._NotCustomized, import("@jbrowse/mobx-state-tree")._NotCustomized>, [undefined]>;
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  descriptions: import("@jbrowse/mobx-state-tree").IType<Record<string, unknown> | undefined, Record<string, unknown> | undefined, Record<string, unknown> | undefined>;
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  } & {
@@ -83,12 +83,12 @@ export declare function stateModelFactory(pluginManager: PluginManager): import(
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  readonly hasExon: boolean | undefined;
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  readonly hasExonOrCDS: boolean | undefined;
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  } & {
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- afterAttach(): void;
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+ afterCreate(): void;
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  }, import("@jbrowse/mobx-state-tree")._NotCustomized, import("@jbrowse/mobx-state-tree")._NotCustomized>, [undefined]>;
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  descriptions: import("@jbrowse/mobx-state-tree").IType<Record<string, unknown> | undefined, Record<string, unknown> | undefined, Record<string, unknown> | undefined>;
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  }>> & import("@jbrowse/mobx-state-tree/dist/internal").NonEmptyObject & import("@jbrowse/mobx-state-tree")._NotCustomized, {
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- id: string;
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  type: "BaseFeatureWidget";
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+ id: string;
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  track: import("@jbrowse/mobx-state-tree").ReferenceIdentifier | undefined;
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  view: import("@jbrowse/mobx-state-tree").ReferenceIdentifier | undefined;
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  trackId: string | undefined;
package/esm/AlignmentsTrack/configSchemaF.d.ts CHANGED
@@ -1,5 +1,5 @@
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  import type PluginManager from '@jbrowse/core/PluginManager';
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- export default function configSchemaFactory(pluginManager: PluginManager): import("node_modules/@jbrowse/core/src/configuration/configurationSchema").ConfigurationSchemaType<{}, import("node_modules/@jbrowse/core/src/configuration/configurationSchema").ConfigurationSchemaOptions<import("node_modules/@jbrowse/core/src/configuration/configurationSchema").ConfigurationSchemaType<{
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+ export default function configSchemaFactory(pluginManager: PluginManager): import("@jbrowse/core/configuration/configurationSchema").ConfigurationSchemaType<{}, import("@jbrowse/core/configuration/configurationSchema").ConfigurationSchemaOptions<import("@jbrowse/core/configuration/configurationSchema").ConfigurationSchemaType<{
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  name: {
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  description: string;
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  type: string;
@@ -31,7 +31,7 @@ export default function configSchemaFactory(pluginManager: PluginManager): impor
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  defaultValue: string;
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  };
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  adapter: import("@jbrowse/mobx-state-tree").IAnyModelType;
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- textSearching: import("node_modules/@jbrowse/core/src/configuration/configurationSchema").ConfigurationSchemaType<{
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+ textSearching: import("@jbrowse/core/configuration/configurationSchema").ConfigurationSchemaType<{
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  indexingAttributes: {
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  type: string;
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  description: string;
@@ -43,9 +43,9 @@ export default function configSchemaFactory(pluginManager: PluginManager): impor
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  defaultValue: string[];
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  };
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  textSearchAdapter: import("@jbrowse/mobx-state-tree").IAnyModelType;
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- }, import("node_modules/@jbrowse/core/src/configuration/configurationSchema").ConfigurationSchemaOptions<undefined, undefined>>;
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+ }, import("@jbrowse/core/configuration/configurationSchema").ConfigurationSchemaOptions<undefined, undefined>>;
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  displays: import("@jbrowse/mobx-state-tree").IArrayType<import("@jbrowse/mobx-state-tree").IAnyModelType>;
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- formatDetails: import("node_modules/@jbrowse/core/src/configuration/configurationSchema").ConfigurationSchemaType<{
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+ formatDetails: import("@jbrowse/core/configuration/configurationSchema").ConfigurationSchemaType<{
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  feature: {
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  type: string;
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  description: string;
@@ -68,8 +68,8 @@ export default function configSchemaFactory(pluginManager: PluginManager): impor
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  defaultValue: number;
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  description: string;
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  };
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- }, import("node_modules/@jbrowse/core/src/configuration/configurationSchema").ConfigurationSchemaOptions<undefined, undefined>>;
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- formatAbout: import("node_modules/@jbrowse/core/src/configuration/configurationSchema").ConfigurationSchemaType<{
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+ }, import("@jbrowse/core/configuration/configurationSchema").ConfigurationSchemaOptions<undefined, undefined>>;
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+ formatAbout: import("@jbrowse/core/configuration/configurationSchema").ConfigurationSchemaType<{
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  config: {
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  type: string;
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  description: string;
@@ -80,5 +80,5 @@ export default function configSchemaFactory(pluginManager: PluginManager): impor
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  type: string;
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  defaultValue: boolean;
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  };
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- }, import("node_modules/@jbrowse/core/src/configuration/configurationSchema").ConfigurationSchemaOptions<undefined, undefined>>;
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- }, import("node_modules/@jbrowse/core/src/configuration/configurationSchema").ConfigurationSchemaOptions<undefined, "trackId">>, undefined>>;
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+ }, import("@jbrowse/core/configuration/configurationSchema").ConfigurationSchemaOptions<undefined, undefined>>;
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+ }, import("@jbrowse/core/configuration/configurationSchema").ConfigurationSchemaOptions<undefined, "trackId">>, undefined>>;
package/esm/BamAdapter/configSchema.d.ts CHANGED
@@ -1,4 +1,4 @@
1
- declare const configSchema: import("node_modules/@jbrowse/core/src/configuration/configurationSchema").ConfigurationSchemaType<{
1
+ declare const configSchema: import("@jbrowse/core/configuration/configurationSchema").ConfigurationSchemaType<{
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  bamLocation: {
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  type: string;
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  defaultValue: {
@@ -6,7 +6,7 @@ declare const configSchema: import("node_modules/@jbrowse/core/src/configuration
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  locationType: string;
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  };
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  };
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- index: import("node_modules/@jbrowse/core/src/configuration/configurationSchema").ConfigurationSchemaType<{
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+ index: import("@jbrowse/core/configuration/configurationSchema").ConfigurationSchemaType<{
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  indexType: {
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  model: import("@jbrowse/mobx-state-tree").ISimpleType<string>;
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  type: string;
@@ -19,11 +19,11 @@ declare const configSchema: import("node_modules/@jbrowse/core/src/configuration
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  locationType: string;
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  };
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  };
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- }, import("node_modules/@jbrowse/core/src/configuration/configurationSchema").ConfigurationSchemaOptions<undefined, undefined>>;
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+ }, import("@jbrowse/core/configuration/configurationSchema").ConfigurationSchemaOptions<undefined, undefined>>;
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  fetchSizeLimit: {
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  type: string;
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  description: string;
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  defaultValue: number;
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  };
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- }, import("node_modules/@jbrowse/core/src/configuration/configurationSchema").ConfigurationSchemaOptions<undefined, undefined>>;
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+ }, import("@jbrowse/core/configuration/configurationSchema").ConfigurationSchemaOptions<undefined, undefined>>;
29
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  export default configSchema;
package/esm/CramAdapter/configSchema.d.ts CHANGED
@@ -1,4 +1,4 @@
1
- declare const configSchema: import("node_modules/@jbrowse/core/src/configuration/configurationSchema").ConfigurationSchemaType<{
1
+ declare const configSchema: import("@jbrowse/core/configuration/configurationSchema").ConfigurationSchemaType<{
2
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  fetchSizeLimit: {
3
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  type: string;
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  description: string;
@@ -18,5 +18,5 @@ declare const configSchema: import("node_modules/@jbrowse/core/src/configuration
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  locationType: string;
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  };
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  };
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- }, import("node_modules/@jbrowse/core/src/configuration/configurationSchema").ConfigurationSchemaOptions<undefined, undefined>>;
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+ }, import("@jbrowse/core/configuration/configurationSchema").ConfigurationSchemaOptions<undefined, undefined>>;
22
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  export default configSchema;
package/esm/HtsgetBamAdapter/configSchema.d.ts CHANGED
@@ -1,4 +1,4 @@
1
- declare const HtsgetBamAdapter: import("node_modules/@jbrowse/core/src/configuration/configurationSchema").ConfigurationSchemaType<{
1
+ declare const HtsgetBamAdapter: import("@jbrowse/core/configuration/configurationSchema").ConfigurationSchemaType<{
2
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  htsgetBase: {
3
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  type: string;
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  description: string;
@@ -9,5 +9,5 @@ declare const HtsgetBamAdapter: import("node_modules/@jbrowse/core/src/configura
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  description: string;
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  defaultValue: string;
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  };
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- }, import("node_modules/@jbrowse/core/src/configuration/configurationSchema").ConfigurationSchemaOptions<undefined, undefined>>;
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+ }, import("@jbrowse/core/configuration/configurationSchema").ConfigurationSchemaOptions<undefined, undefined>>;
13
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  export default HtsgetBamAdapter;
package/esm/LinearAlignmentsDisplay/configSchema.d.ts CHANGED
@@ -1,12 +1,12 @@
1
1
  import type PluginManager from '@jbrowse/core/PluginManager';
2
- export default function configModelFactory(pluginManager: PluginManager): import("node_modules/@jbrowse/core/src/configuration/configurationSchema").ConfigurationSchemaType<{
2
+ export default function configModelFactory(pluginManager: PluginManager): import("@jbrowse/core/configuration/configurationSchema").ConfigurationSchemaType<{
3
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  pileupDisplay: import("@jbrowse/core/configuration").AnyConfigurationSchemaType;
4
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  snpCoverageDisplay: import("@jbrowse/core/configuration").AnyConfigurationSchemaType;
5
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  height: {
6
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  type: string;
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  defaultValue: number;
8
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  };
9
- }, import("node_modules/@jbrowse/core/src/configuration/configurationSchema").ConfigurationSchemaOptions<import("node_modules/@jbrowse/core/src/configuration/configurationSchema").ConfigurationSchemaType<{
9
+ }, import("@jbrowse/core/configuration/configurationSchema").ConfigurationSchemaOptions<import("@jbrowse/core/configuration/configurationSchema").ConfigurationSchemaType<{
10
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  maxFeatureScreenDensity: {
11
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  type: string;
12
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  description: string;
@@ -33,4 +33,4 @@ export default function configModelFactory(pluginManager: PluginManager): import
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  description: string;
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  defaultValue: never[];
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  };
36
- }, import("node_modules/@jbrowse/core/src/configuration/configurationSchema").ConfigurationSchemaOptions<undefined, "displayId">>, undefined>>;
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+ }, import("@jbrowse/core/configuration/configurationSchema").ConfigurationSchemaOptions<undefined, "displayId">>, undefined>>;
package/esm/LinearPileupDisplay/SharedLinearPileupDisplayMixin.d.ts CHANGED
@@ -38,6 +38,7 @@ export declare function SharedLinearPileupDisplayMixin(configSchema: AnyConfigur
38
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  statusMessage?: string;
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  reactElement?: React.ReactElement;
40
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  isRenderingPending?: boolean;
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+ displayHeight?: number;
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  };
42
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  }) => import("react/jsx-runtime").JSX.Element;
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  renderProps: any;
@@ -56,10 +57,11 @@ export declare function SharedLinearPileupDisplayMixin(configSchema: AnyConfigur
56
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  beforeDestroy(): void;
57
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  } & {
58
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  readonly statusMessage: any;
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+ readonly displayHeight: number | undefined;
59
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  } & {
60
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  afterAttach(): void;
61
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  }, import("@jbrowse/mobx-state-tree")._NotCustomized, import("@jbrowse/mobx-state-tree")._NotCustomized>>;
62
- configuration: import("node_modules/@jbrowse/core/src/configuration/configurationSchema.ts").ConfigurationSchemaType<{
64
+ configuration: import("@jbrowse/core/configuration/configurationSchema").ConfigurationSchemaType<{
63
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  maxFeatureScreenDensity: {
64
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  type: string;
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  description: string;
@@ -86,7 +88,7 @@ export declare function SharedLinearPileupDisplayMixin(configSchema: AnyConfigur
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  description: string;
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  defaultValue: never[];
88
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  };
89
- }, import("node_modules/@jbrowse/core/src/configuration/configurationSchema.ts").ConfigurationSchemaOptions<undefined, "displayId">>;
91
+ }, import("@jbrowse/core/configuration/configurationSchema").ConfigurationSchemaOptions<undefined, "displayId">>;
90
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  showLegend: import("@jbrowse/mobx-state-tree").IMaybe<import("@jbrowse/mobx-state-tree").ISimpleType<boolean>>;
91
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  showTooltips: import("@jbrowse/mobx-state-tree").IMaybe<import("@jbrowse/mobx-state-tree").ISimpleType<boolean>>;
92
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  } & {
@@ -389,6 +391,7 @@ export declare function SharedLinearPileupDisplayMixin(configSchema: AnyConfigur
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  statusMessage?: string;
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  reactElement?: React.ReactElement;
391
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  isRenderingPending?: boolean;
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+ displayHeight?: number;
392
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  };
393
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  }) => import("react/jsx-runtime").JSX.Element;
394
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  renderProps: any;
@@ -407,6 +410,7 @@ export declare function SharedLinearPileupDisplayMixin(configSchema: AnyConfigur
407
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  beforeDestroy(): void;
408
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  } & {
409
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  readonly statusMessage: any;
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+ readonly displayHeight: number | undefined;
410
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  } & {
411
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  afterAttach(): void;
412
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  }, import("@jbrowse/mobx-state-tree")._NotCustomized, import("@jbrowse/mobx-state-tree")._NotCustomized>> & import("@jbrowse/mobx-state-tree").IStateTreeNode<import("@jbrowse/mobx-state-tree").IMapType<import("@jbrowse/mobx-state-tree").IModelType<{
@@ -433,6 +437,7 @@ export declare function SharedLinearPileupDisplayMixin(configSchema: AnyConfigur
433
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  statusMessage?: string;
434
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  reactElement?: React.ReactElement;
435
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  isRenderingPending?: boolean;
440
+ displayHeight?: number;
436
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  };
437
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  }) => import("react/jsx-runtime").JSX.Element;
438
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  renderProps: any;
@@ -451,6 +456,7 @@ export declare function SharedLinearPileupDisplayMixin(configSchema: AnyConfigur
451
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  beforeDestroy(): void;
452
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  } & {
453
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  readonly statusMessage: any;
459
+ readonly displayHeight: number | undefined;
454
460
  } & {
455
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  afterAttach(): void;
456
462
  }, import("@jbrowse/mobx-state-tree")._NotCustomized, import("@jbrowse/mobx-state-tree")._NotCustomized>>>;
@@ -464,7 +470,7 @@ export declare function SharedLinearPileupDisplayMixin(configSchema: AnyConfigur
464
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  [x: string]: any;
465
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  } & import("@jbrowse/mobx-state-tree/dist/internal").NonEmptyObject & any & import("@jbrowse/mobx-state-tree").IStateTreeNode<AnyConfigurationSchemaType>);
466
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  } & import("@jbrowse/mobx-state-tree").IStateTreeNode<AnyConfigurationSchemaType>);
467
- } & import("@jbrowse/mobx-state-tree").IStateTreeNode<import("node_modules/@jbrowse/core/src/configuration/configurationSchema.ts").ConfigurationSchemaType<{
473
+ } & import("@jbrowse/mobx-state-tree").IStateTreeNode<import("@jbrowse/core/configuration/configurationSchema").ConfigurationSchemaType<{
468
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  maxFeatureScreenDensity: {
469
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  type: string;
470
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  description: string;
@@ -491,7 +497,7 @@ export declare function SharedLinearPileupDisplayMixin(configSchema: AnyConfigur
491
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  description: string;
492
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  defaultValue: never[];
493
499
  };
494
- }, import("node_modules/@jbrowse/core/src/configuration/configurationSchema.ts").ConfigurationSchemaOptions<undefined, "displayId">>>;
500
+ }, import("@jbrowse/core/configuration/configurationSchema").ConfigurationSchemaOptions<undefined, "displayId">>>;
495
501
  showLegend: boolean | undefined;
496
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  showTooltips: boolean | undefined;
497
503
  } & import("@jbrowse/mobx-state-tree/dist/internal").NonEmptyObject & {
@@ -781,6 +787,7 @@ export declare function SharedLinearPileupDisplayMixin(configSchema: AnyConfigur
781
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  statusMessage?: string;
782
788
  reactElement?: React.ReactElement;
783
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  isRenderingPending?: boolean;
790
+ displayHeight?: number;
784
791
  };
785
792
  }) => import("react/jsx-runtime").JSX.Element;
786
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  renderProps: any;
@@ -799,10 +806,11 @@ export declare function SharedLinearPileupDisplayMixin(configSchema: AnyConfigur
799
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  beforeDestroy(): void;
800
807
  } & {
801
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  readonly statusMessage: any;
809
+ readonly displayHeight: number | undefined;
802
810
  } & {
803
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  afterAttach(): void;
804
812
  }, import("@jbrowse/mobx-state-tree")._NotCustomized, import("@jbrowse/mobx-state-tree")._NotCustomized>>;
805
- configuration: import("node_modules/@jbrowse/core/src/configuration/configurationSchema.ts").ConfigurationSchemaType<{
813
+ configuration: import("@jbrowse/core/configuration/configurationSchema").ConfigurationSchemaType<{
806
814
  maxFeatureScreenDensity: {
807
815
  type: string;
808
816
  description: string;
@@ -829,7 +837,7 @@ export declare function SharedLinearPileupDisplayMixin(configSchema: AnyConfigur
829
837
  description: string;
830
838
  defaultValue: never[];
831
839
  };
832
- }, import("node_modules/@jbrowse/core/src/configuration/configurationSchema.ts").ConfigurationSchemaOptions<undefined, "displayId">>;
840
+ }, import("@jbrowse/core/configuration/configurationSchema").ConfigurationSchemaOptions<undefined, "displayId">>;
833
841
  showLegend: import("@jbrowse/mobx-state-tree").IMaybe<import("@jbrowse/mobx-state-tree").ISimpleType<boolean>>;
834
842
  showTooltips: import("@jbrowse/mobx-state-tree").IMaybe<import("@jbrowse/mobx-state-tree").ISimpleType<boolean>>;
835
843
  }, {
@@ -1375,6 +1383,7 @@ export declare function SharedLinearPileupDisplayMixin(configSchema: AnyConfigur
1375
1383
  statusMessage?: string;
1376
1384
  reactElement?: React.ReactElement;
1377
1385
  isRenderingPending?: boolean;
1386
+ displayHeight?: number;
1378
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  };
1379
1388
  }) => import("react/jsx-runtime").JSX.Element;
1380
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  renderProps: any;
@@ -1393,10 +1402,11 @@ export declare function SharedLinearPileupDisplayMixin(configSchema: AnyConfigur
1393
1402
  beforeDestroy(): void;
1394
1403
  } & {
1395
1404
  readonly statusMessage: any;
1405
+ readonly displayHeight: number | undefined;
1396
1406
  } & {
1397
1407
  afterAttach(): void;
1398
1408
  }, import("@jbrowse/mobx-state-tree")._NotCustomized, import("@jbrowse/mobx-state-tree")._NotCustomized>>;
1399
- configuration: import("node_modules/@jbrowse/core/src/configuration/configurationSchema.ts").ConfigurationSchemaType<{
1409
+ configuration: import("@jbrowse/core/configuration/configurationSchema").ConfigurationSchemaType<{
1400
1410
  maxFeatureScreenDensity: {
1401
1411
  type: string;
1402
1412
  description: string;
@@ -1423,7 +1433,7 @@ export declare function SharedLinearPileupDisplayMixin(configSchema: AnyConfigur
1423
1433
  description: string;
1424
1434
  defaultValue: never[];
1425
1435
  };
1426
- }, import("node_modules/@jbrowse/core/src/configuration/configurationSchema.ts").ConfigurationSchemaOptions<undefined, "displayId">>;
1436
+ }, import("@jbrowse/core/configuration/configurationSchema").ConfigurationSchemaOptions<undefined, "displayId">>;
1427
1437
  showLegend: import("@jbrowse/mobx-state-tree").IMaybe<import("@jbrowse/mobx-state-tree").ISimpleType<boolean>>;
1428
1438
  showTooltips: import("@jbrowse/mobx-state-tree").IMaybe<import("@jbrowse/mobx-state-tree").ISimpleType<boolean>>;
1429
1439
  } & {
@@ -1472,6 +1482,7 @@ export declare function SharedLinearPileupDisplayMixin(configSchema: AnyConfigur
1472
1482
  statusMessage?: string;
1473
1483
  reactElement?: React.ReactElement;
1474
1484
  isRenderingPending?: boolean;
1485
+ displayHeight?: number;
1475
1486
  };
1476
1487
  }) => import("react/jsx-runtime").JSX.Element;
1477
1488
  renderProps: any;
@@ -1490,10 +1501,11 @@ export declare function SharedLinearPileupDisplayMixin(configSchema: AnyConfigur
1490
1501
  beforeDestroy(): void;
1491
1502
  } & {
1492
1503
  readonly statusMessage: any;
1504
+ readonly displayHeight: number | undefined;
1493
1505
  } & {
1494
1506
  afterAttach(): void;
1495
1507
  }, import("@jbrowse/mobx-state-tree")._NotCustomized, import("@jbrowse/mobx-state-tree")._NotCustomized>>;
1496
- configuration: import("node_modules/@jbrowse/core/src/configuration/configurationSchema.ts").ConfigurationSchemaType<{
1508
+ configuration: import("@jbrowse/core/configuration/configurationSchema").ConfigurationSchemaType<{
1497
1509
  maxFeatureScreenDensity: {
1498
1510
  type: string;
1499
1511
  description: string;
@@ -1520,7 +1532,7 @@ export declare function SharedLinearPileupDisplayMixin(configSchema: AnyConfigur
1520
1532
  description: string;
1521
1533
  defaultValue: never[];
1522
1534
  };
1523
- }, import("node_modules/@jbrowse/core/src/configuration/configurationSchema.ts").ConfigurationSchemaOptions<undefined, "displayId">>;
1535
+ }, import("@jbrowse/core/configuration/configurationSchema").ConfigurationSchemaOptions<undefined, "displayId">>;
1524
1536
  showLegend: import("@jbrowse/mobx-state-tree").IMaybe<import("@jbrowse/mobx-state-tree").ISimpleType<boolean>>;
1525
1537
  showTooltips: import("@jbrowse/mobx-state-tree").IMaybe<import("@jbrowse/mobx-state-tree").ISimpleType<boolean>>;
1526
1538
  } & {
package/esm/LinearPileupDisplay/configSchema.d.ts CHANGED
@@ -1,13 +1,13 @@
1
1
  import type PluginManager from '@jbrowse/core/PluginManager';
2
- declare function configSchemaF(pluginManager: PluginManager): import("node_modules/@jbrowse/core/src/configuration/configurationSchema.ts").ConfigurationSchemaType<{
2
+ declare function configSchemaF(pluginManager: PluginManager): import("@jbrowse/core/configuration/configurationSchema").ConfigurationSchemaType<{
3
3
  defaultRendering: {
4
4
  type: string;
5
5
  model: import("@jbrowse/mobx-state-tree").ISimpleType<string>;
6
6
  defaultValue: string;
7
7
  };
8
- renderers: import("node_modules/@jbrowse/core/src/configuration/configurationSchema.ts").ConfigurationSchemaType<{
8
+ renderers: import("@jbrowse/core/configuration/configurationSchema").ConfigurationSchemaType<{
9
9
  PileupRenderer: import("@jbrowse/core/configuration").AnyConfigurationSchemaType;
10
- }, import("node_modules/@jbrowse/core/src/configuration/configurationSchema.ts").ConfigurationSchemaOptions<undefined, undefined>>;
10
+ }, import("@jbrowse/core/configuration/configurationSchema").ConfigurationSchemaOptions<undefined, undefined>>;
11
11
  maxFeatureScreenDensity: {
12
12
  type: string;
13
13
  description: string;
@@ -28,9 +28,9 @@ declare function configSchemaF(pluginManager: PluginManager): import("node_modul
28
28
  flagExclude: number;
29
29
  };
30
30
  };
31
- }, import("node_modules/@jbrowse/core/src/configuration/configurationSchema.ts").ConfigurationSchemaOptions<import("node_modules/@jbrowse/core/src/configuration/configurationSchema.ts").ConfigurationSchemaType<{
31
+ }, import("@jbrowse/core/configuration/configurationSchema").ConfigurationSchemaOptions<import("@jbrowse/core/configuration/configurationSchema").ConfigurationSchemaType<{
32
32
  renderer: import("@jbrowse/mobx-state-tree").IAnyModelType;
33
- }, import("node_modules/@jbrowse/core/src/configuration/configurationSchema.ts").ConfigurationSchemaOptions<import("node_modules/@jbrowse/core/src/configuration/configurationSchema.ts").ConfigurationSchemaType<{
33
+ }, import("@jbrowse/core/configuration/configurationSchema").ConfigurationSchemaOptions<import("@jbrowse/core/configuration/configurationSchema").ConfigurationSchemaType<{
34
34
  maxFeatureScreenDensity: {
35
35
  type: string;
36
36
  description: string;
@@ -57,5 +57,5 @@ declare function configSchemaF(pluginManager: PluginManager): import("node_modul
57
57
  description: string;
58
58
  defaultValue: never[];
59
59
  };
60
- }, import("node_modules/@jbrowse/core/src/configuration/configurationSchema.ts").ConfigurationSchemaOptions<undefined, "displayId">>, undefined>>, undefined>>;
60
+ }, import("@jbrowse/core/configuration/configurationSchema").ConfigurationSchemaOptions<undefined, "displayId">>, undefined>>, undefined>>;
61
61
  export default configSchemaF;
package/esm/LinearPileupDisplay/model.d.ts CHANGED
@@ -35,6 +35,7 @@ declare function stateModelFactory(configSchema: AnyConfigurationSchemaType): im
35
35
  statusMessage?: string;
36
36
  reactElement?: React.ReactElement;
37
37
  isRenderingPending?: boolean;
38
+ displayHeight?: number;
38
39
  };
39
40
  }) => import("react/jsx-runtime").JSX.Element;
40
41
  renderProps: any;
@@ -53,10 +54,11 @@ declare function stateModelFactory(configSchema: AnyConfigurationSchemaType): im
53
54
  beforeDestroy(): void;
54
55
  } & {
55
56
  readonly statusMessage: any;
57
+ readonly displayHeight: number | undefined;
56
58
  } & {
57
59
  afterAttach(): void;
58
60
  }, import("@jbrowse/mobx-state-tree")._NotCustomized, import("@jbrowse/mobx-state-tree")._NotCustomized>>;
59
- configuration: import("node_modules/@jbrowse/core/src/configuration/configurationSchema.ts").ConfigurationSchemaType<{
61
+ configuration: import("@jbrowse/core/configuration/configurationSchema").ConfigurationSchemaType<{
60
62
  maxFeatureScreenDensity: {
61
63
  type: string;
62
64
  description: string;
@@ -83,7 +85,7 @@ declare function stateModelFactory(configSchema: AnyConfigurationSchemaType): im
83
85
  description: string;
84
86
  defaultValue: never[];
85
87
  };
86
- }, import("node_modules/@jbrowse/core/src/configuration/configurationSchema.ts").ConfigurationSchemaOptions<undefined, "displayId">>;
88
+ }, import("@jbrowse/core/configuration/configurationSchema").ConfigurationSchemaOptions<undefined, "displayId">>;
87
89
  showLegend: import("@jbrowse/mobx-state-tree").IMaybe<import("@jbrowse/mobx-state-tree").ISimpleType<boolean>>;
88
90
  showTooltips: import("@jbrowse/mobx-state-tree").IMaybe<import("@jbrowse/mobx-state-tree").ISimpleType<boolean>>;
89
91
  } & {
@@ -392,6 +394,7 @@ declare function stateModelFactory(configSchema: AnyConfigurationSchemaType): im
392
394
  statusMessage?: string;
393
395
  reactElement?: React.ReactElement;
394
396
  isRenderingPending?: boolean;
397
+ displayHeight?: number;
395
398
  };
396
399
  }) => import("react/jsx-runtime").JSX.Element;
397
400
  renderProps: any;
@@ -410,6 +413,7 @@ declare function stateModelFactory(configSchema: AnyConfigurationSchemaType): im
410
413
  beforeDestroy(): void;
411
414
  } & {
412
415
  readonly statusMessage: any;
416
+ readonly displayHeight: number | undefined;
413
417
  } & {
414
418
  afterAttach(): void;
415
419
  }, import("@jbrowse/mobx-state-tree")._NotCustomized, import("@jbrowse/mobx-state-tree")._NotCustomized>> & import("@jbrowse/mobx-state-tree").IStateTreeNode<import("@jbrowse/mobx-state-tree").IMapType<import("@jbrowse/mobx-state-tree").IModelType<{
@@ -436,6 +440,7 @@ declare function stateModelFactory(configSchema: AnyConfigurationSchemaType): im
436
440
  statusMessage?: string;
437
441
  reactElement?: React.ReactElement;
438
442
  isRenderingPending?: boolean;
443
+ displayHeight?: number;
439
444
  };
440
445
  }) => import("react/jsx-runtime").JSX.Element;
441
446
  renderProps: any;
@@ -454,6 +459,7 @@ declare function stateModelFactory(configSchema: AnyConfigurationSchemaType): im
454
459
  beforeDestroy(): void;
455
460
  } & {
456
461
  readonly statusMessage: any;
462
+ readonly displayHeight: number | undefined;
457
463
  } & {
458
464
  afterAttach(): void;
459
465
  }, import("@jbrowse/mobx-state-tree")._NotCustomized, import("@jbrowse/mobx-state-tree")._NotCustomized>>>;
@@ -467,7 +473,7 @@ declare function stateModelFactory(configSchema: AnyConfigurationSchemaType): im
467
473
  [x: string]: any;
468
474
  } & import("@jbrowse/mobx-state-tree/dist/internal").NonEmptyObject & any & import("@jbrowse/mobx-state-tree").IStateTreeNode<AnyConfigurationSchemaType>);
469
475
  } & import("@jbrowse/mobx-state-tree").IStateTreeNode<AnyConfigurationSchemaType>);
470
- } & import("@jbrowse/mobx-state-tree").IStateTreeNode<import("node_modules/@jbrowse/core/src/configuration/configurationSchema.ts").ConfigurationSchemaType<{
476
+ } & import("@jbrowse/mobx-state-tree").IStateTreeNode<import("@jbrowse/core/configuration/configurationSchema").ConfigurationSchemaType<{
471
477
  maxFeatureScreenDensity: {
472
478
  type: string;
473
479
  description: string;
@@ -494,7 +500,7 @@ declare function stateModelFactory(configSchema: AnyConfigurationSchemaType): im
494
500
  description: string;
495
501
  defaultValue: never[];
496
502
  };
497
- }, import("node_modules/@jbrowse/core/src/configuration/configurationSchema.ts").ConfigurationSchemaOptions<undefined, "displayId">>>;
503
+ }, import("@jbrowse/core/configuration/configurationSchema").ConfigurationSchemaOptions<undefined, "displayId">>>;
498
504
  showLegend: boolean | undefined;
499
505
  showTooltips: boolean | undefined;
500
506
  } & import("@jbrowse/mobx-state-tree/dist/internal").NonEmptyObject & {
@@ -784,6 +790,7 @@ declare function stateModelFactory(configSchema: AnyConfigurationSchemaType): im
784
790
  statusMessage?: string;
785
791
  reactElement?: React.ReactElement;
786
792
  isRenderingPending?: boolean;
793
+ displayHeight?: number;
787
794
  };
788
795
  }) => import("react/jsx-runtime").JSX.Element;
789
796
  renderProps: any;
@@ -802,10 +809,11 @@ declare function stateModelFactory(configSchema: AnyConfigurationSchemaType): im
802
809
  beforeDestroy(): void;
803
810
  } & {
804
811
  readonly statusMessage: any;
812
+ readonly displayHeight: number | undefined;
805
813
  } & {
806
814
  afterAttach(): void;
807
815
  }, import("@jbrowse/mobx-state-tree")._NotCustomized, import("@jbrowse/mobx-state-tree")._NotCustomized>>;
808
- configuration: import("node_modules/@jbrowse/core/src/configuration/configurationSchema.ts").ConfigurationSchemaType<{
816
+ configuration: import("@jbrowse/core/configuration/configurationSchema").ConfigurationSchemaType<{
809
817
  maxFeatureScreenDensity: {
810
818
  type: string;
811
819
  description: string;
@@ -832,7 +840,7 @@ declare function stateModelFactory(configSchema: AnyConfigurationSchemaType): im
832
840
  description: string;
833
841
  defaultValue: never[];
834
842
  };
835
- }, import("node_modules/@jbrowse/core/src/configuration/configurationSchema.ts").ConfigurationSchemaOptions<undefined, "displayId">>;
843
+ }, import("@jbrowse/core/configuration/configurationSchema").ConfigurationSchemaOptions<undefined, "displayId">>;
836
844
  showLegend: import("@jbrowse/mobx-state-tree").IMaybe<import("@jbrowse/mobx-state-tree").ISimpleType<boolean>>;
837
845
  showTooltips: import("@jbrowse/mobx-state-tree").IMaybe<import("@jbrowse/mobx-state-tree").ISimpleType<boolean>>;
838
846
  }, {
@@ -1490,6 +1498,7 @@ declare function stateModelFactory(configSchema: AnyConfigurationSchemaType): im
1490
1498
  statusMessage?: string;
1491
1499
  reactElement?: React.ReactElement;
1492
1500
  isRenderingPending?: boolean;
1501
+ displayHeight?: number;
1493
1502
  };
1494
1503
  }) => import("react/jsx-runtime").JSX.Element;
1495
1504
  renderProps: any;
@@ -1508,10 +1517,11 @@ declare function stateModelFactory(configSchema: AnyConfigurationSchemaType): im
1508
1517
  beforeDestroy(): void;
1509
1518
  } & {
1510
1519
  readonly statusMessage: any;
1520
+ readonly displayHeight: number | undefined;
1511
1521
  } & {
1512
1522
  afterAttach(): void;
1513
1523
  }, import("@jbrowse/mobx-state-tree")._NotCustomized, import("@jbrowse/mobx-state-tree")._NotCustomized>>;
1514
- configuration: import("node_modules/@jbrowse/core/src/configuration/configurationSchema.ts").ConfigurationSchemaType<{
1524
+ configuration: import("@jbrowse/core/configuration/configurationSchema").ConfigurationSchemaType<{
1515
1525
  maxFeatureScreenDensity: {
1516
1526
  type: string;
1517
1527
  description: string;
@@ -1538,7 +1548,7 @@ declare function stateModelFactory(configSchema: AnyConfigurationSchemaType): im
1538
1548
  description: string;
1539
1549
  defaultValue: never[];
1540
1550
  };
1541
- }, import("node_modules/@jbrowse/core/src/configuration/configurationSchema.ts").ConfigurationSchemaOptions<undefined, "displayId">>;
1551
+ }, import("@jbrowse/core/configuration/configurationSchema").ConfigurationSchemaOptions<undefined, "displayId">>;
1542
1552
  showLegend: import("@jbrowse/mobx-state-tree").IMaybe<import("@jbrowse/mobx-state-tree").ISimpleType<boolean>>;
1543
1553
  showTooltips: import("@jbrowse/mobx-state-tree").IMaybe<import("@jbrowse/mobx-state-tree").ISimpleType<boolean>>;
1544
1554
  } & {
@@ -1587,6 +1597,7 @@ declare function stateModelFactory(configSchema: AnyConfigurationSchemaType): im
1587
1597
  statusMessage?: string;
1588
1598
  reactElement?: React.ReactElement;
1589
1599
  isRenderingPending?: boolean;
1600
+ displayHeight?: number;
1590
1601
  };
1591
1602
  }) => import("react/jsx-runtime").JSX.Element;
1592
1603
  renderProps: any;
@@ -1605,10 +1616,11 @@ declare function stateModelFactory(configSchema: AnyConfigurationSchemaType): im
1605
1616
  beforeDestroy(): void;
1606
1617
  } & {
1607
1618
  readonly statusMessage: any;
1619
+ readonly displayHeight: number | undefined;
1608
1620
  } & {
1609
1621
  afterAttach(): void;
1610
1622
  }, import("@jbrowse/mobx-state-tree")._NotCustomized, import("@jbrowse/mobx-state-tree")._NotCustomized>>;
1611
- configuration: import("node_modules/@jbrowse/core/src/configuration/configurationSchema.ts").ConfigurationSchemaType<{
1623
+ configuration: import("@jbrowse/core/configuration/configurationSchema").ConfigurationSchemaType<{
1612
1624
  maxFeatureScreenDensity: {
1613
1625
  type: string;
1614
1626
  description: string;
@@ -1635,7 +1647,7 @@ declare function stateModelFactory(configSchema: AnyConfigurationSchemaType): im
1635
1647
  description: string;
1636
1648
  defaultValue: never[];
1637
1649
  };
1638
- }, import("node_modules/@jbrowse/core/src/configuration/configurationSchema.ts").ConfigurationSchemaOptions<undefined, "displayId">>;
1650
+ }, import("@jbrowse/core/configuration/configurationSchema").ConfigurationSchemaOptions<undefined, "displayId">>;
1639
1651
  showLegend: import("@jbrowse/mobx-state-tree").IMaybe<import("@jbrowse/mobx-state-tree").ISimpleType<boolean>>;
1640
1652
  showTooltips: import("@jbrowse/mobx-state-tree").IMaybe<import("@jbrowse/mobx-state-tree").ISimpleType<boolean>>;
1641
1653
  } & {
package/esm/LinearReadArcsDisplay/configSchema.d.ts CHANGED
@@ -1,5 +1,5 @@
1
1
  import type PluginManager from '@jbrowse/core/PluginManager';
2
- declare function configSchemaF(pluginManager: PluginManager): import("node_modules/@jbrowse/core/src/configuration/configurationSchema.ts").ConfigurationSchemaType<{
2
+ declare function configSchemaF(pluginManager: PluginManager): import("@jbrowse/core/configuration/configurationSchema").ConfigurationSchemaType<{
3
3
  maxFeatureScreenDensity: {
4
4
  type: string;
5
5
  description: string;
@@ -28,9 +28,9 @@ declare function configSchemaF(pluginManager: PluginManager): import("node_modul
28
28
  flagExclude: number;
29
29
  };
30
30
  };
31
- }, import("node_modules/@jbrowse/core/src/configuration/configurationSchema.ts").ConfigurationSchemaOptions<import("node_modules/@jbrowse/core/src/configuration/configurationSchema.ts").ConfigurationSchemaType<{
31
+ }, import("@jbrowse/core/configuration/configurationSchema").ConfigurationSchemaOptions<import("@jbrowse/core/configuration/configurationSchema").ConfigurationSchemaType<{
32
32
  renderer: import("@jbrowse/mobx-state-tree").IAnyModelType;
33
- }, import("node_modules/@jbrowse/core/src/configuration/configurationSchema.ts").ConfigurationSchemaOptions<import("node_modules/@jbrowse/core/src/configuration/configurationSchema.ts").ConfigurationSchemaType<{
33
+ }, import("@jbrowse/core/configuration/configurationSchema").ConfigurationSchemaOptions<import("@jbrowse/core/configuration/configurationSchema").ConfigurationSchemaType<{
34
34
  maxFeatureScreenDensity: {
35
35
  type: string;
36
36
  description: string;
@@ -57,5 +57,5 @@ declare function configSchemaF(pluginManager: PluginManager): import("node_modul
57
57
  description: string;
58
58
  defaultValue: never[];
59
59
  };
60
- }, import("node_modules/@jbrowse/core/src/configuration/configurationSchema.ts").ConfigurationSchemaOptions<undefined, "displayId">>, undefined>>, undefined>>;
60
+ }, import("@jbrowse/core/configuration/configurationSchema").ConfigurationSchemaOptions<undefined, "displayId">>, undefined>>, undefined>>;
61
61
  export default configSchemaF;
package/esm/LinearReadCloudDisplay/configSchema.d.ts CHANGED
@@ -1,5 +1,5 @@
1
1
  import type PluginManager from '@jbrowse/core/PluginManager';
2
- declare function configSchemaF(pluginManager: PluginManager): import("node_modules/@jbrowse/core/src/configuration/configurationSchema.ts").ConfigurationSchemaType<{
2
+ declare function configSchemaF(pluginManager: PluginManager): import("@jbrowse/core/configuration/configurationSchema").ConfigurationSchemaType<{
3
3
  minSubfeatureWidth: {
4
4
  type: string;
5
5
  defaultValue: number;
@@ -38,9 +38,9 @@ declare function configSchemaF(pluginManager: PluginManager): import("node_modul
38
38
  flagExclude: number;
39
39
  };
40
40
  };
41
- }, import("node_modules/@jbrowse/core/src/configuration/configurationSchema.ts").ConfigurationSchemaOptions<import("node_modules/@jbrowse/core/src/configuration/configurationSchema.ts").ConfigurationSchemaType<{
41
+ }, import("@jbrowse/core/configuration/configurationSchema").ConfigurationSchemaOptions<import("@jbrowse/core/configuration/configurationSchema").ConfigurationSchemaType<{
42
42
  renderer: import("@jbrowse/mobx-state-tree").IAnyModelType;
43
- }, import("node_modules/@jbrowse/core/src/configuration/configurationSchema.ts").ConfigurationSchemaOptions<import("node_modules/@jbrowse/core/src/configuration/configurationSchema.ts").ConfigurationSchemaType<{
43
+ }, import("@jbrowse/core/configuration/configurationSchema").ConfigurationSchemaOptions<import("@jbrowse/core/configuration/configurationSchema").ConfigurationSchemaType<{
44
44
  maxFeatureScreenDensity: {
45
45
  type: string;
46
46
  description: string;
@@ -67,5 +67,5 @@ declare function configSchemaF(pluginManager: PluginManager): import("node_modul
67
67
  description: string;
68
68
  defaultValue: never[];
69
69
  };
70
- }, import("node_modules/@jbrowse/core/src/configuration/configurationSchema.ts").ConfigurationSchemaOptions<undefined, "displayId">>, undefined>>, undefined>>;
70
+ }, import("@jbrowse/core/configuration/configurationSchema").ConfigurationSchemaOptions<undefined, "displayId">>, undefined>>, undefined>>;
71
71
  export default configSchemaF;
package/esm/LinearSNPCoverageDisplay/configSchema.d.ts CHANGED
@@ -1,5 +1,5 @@
1
1
  import type PluginManager from '@jbrowse/core/PluginManager';
2
- export default function SNPCoverageConfigFactory(pluginManager: PluginManager): import("node_modules/@jbrowse/core/src/configuration/configurationSchema.ts").ConfigurationSchemaType<{
2
+ export default function SNPCoverageConfigFactory(pluginManager: PluginManager): import("@jbrowse/core/configuration/configurationSchema").ConfigurationSchemaType<{
3
3
  autoscale: {
4
4
  type: string;
5
5
  defaultValue: string;
@@ -32,9 +32,9 @@ export default function SNPCoverageConfigFactory(pluginManager: PluginManager):
32
32
  description: string;
33
33
  defaultValue: boolean;
34
34
  };
35
- renderers: import("node_modules/@jbrowse/core/src/configuration/configurationSchema.ts").ConfigurationSchemaType<{
35
+ renderers: import("@jbrowse/core/configuration/configurationSchema").ConfigurationSchemaType<{
36
36
  SNPCoverageRenderer: import("@jbrowse/core/configuration").AnyConfigurationSchemaType;
37
- }, import("node_modules/@jbrowse/core/src/configuration/configurationSchema.ts").ConfigurationSchemaOptions<undefined, undefined>>;
37
+ }, import("@jbrowse/core/configuration/configurationSchema").ConfigurationSchemaOptions<undefined, undefined>>;
38
38
  colorBy: {
39
39
  type: string;
40
40
  description: string;
@@ -50,7 +50,7 @@ export default function SNPCoverageConfigFactory(pluginManager: PluginManager):
50
50
  flagExclude: number;
51
51
  };
52
52
  };
53
- }, import("node_modules/@jbrowse/core/src/configuration/configurationSchema.ts").ConfigurationSchemaOptions<import("node_modules/@jbrowse/core/src/configuration/configurationSchema.ts").ConfigurationSchemaType<{
53
+ }, import("@jbrowse/core/configuration/configurationSchema").ConfigurationSchemaOptions<import("@jbrowse/core/configuration/configurationSchema").ConfigurationSchemaType<{
54
54
  maxFeatureScreenDensity: {
55
55
  type: string;
56
56
  description: string;
@@ -77,4 +77,4 @@ export default function SNPCoverageConfigFactory(pluginManager: PluginManager):
77
77
  description: string;
78
78
  defaultValue: never[];
79
79
  };
80
- }, import("node_modules/@jbrowse/core/src/configuration/configurationSchema.ts").ConfigurationSchemaOptions<undefined, "displayId">>, undefined>>;
80
+ }, import("@jbrowse/core/configuration/configurationSchema").ConfigurationSchemaOptions<undefined, "displayId">>, undefined>>;