@jbrowse/plugin-alignments 2.8.0 → 2.9.0

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Files changed (7) hide show
  1. package/dist/AlignmentsFeatureDetail/index.d.ts +4 -1
  2. package/dist/AlignmentsTrack/configSchemaF.d.ts +5 -0
  3. package/dist/LinearSNPCoverageDisplay/models/configSchema.js +1 -1
  4. package/esm/AlignmentsFeatureDetail/index.d.ts +4 -1
  5. package/esm/AlignmentsTrack/configSchemaF.d.ts +5 -0
  6. package/esm/LinearSNPCoverageDisplay/models/configSchema.js +1 -1
  7. package/package.json +2 -2
package/dist/AlignmentsFeatureDetail/index.d.ts CHANGED
@@ -10,6 +10,7 @@ export declare function stateModelFactory(pluginManager: PluginManager): import(
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  track: import("mobx-state-tree").IMaybe<import("mobx-state-tree").IReferenceType<import("mobx-state-tree").IAnyType>>;
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  trackId: import("mobx-state-tree").IMaybe<import("mobx-state-tree").ISimpleType<string>>;
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  trackType: import("mobx-state-tree").IMaybe<import("mobx-state-tree").ISimpleType<string>>;
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+ maxDepth: import("mobx-state-tree").IMaybe<import("mobx-state-tree").ISimpleType<number>>;
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  } & {
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  type: import("mobx-state-tree").ISimpleType<"AlignmentsFeatureWidget">;
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  }, {
@@ -18,7 +19,7 @@ export declare function stateModelFactory(pluginManager: PluginManager): import(
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  setFeatureData(featureData: Record<string, unknown>): void;
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  clearFeatureData(): void;
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  setFormattedData(feat: Record<string, unknown>): void;
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- setExtra(type?: string | undefined, trackId?: string | undefined): void;
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+ setExtra(type?: string | undefined, trackId?: string | undefined, maxDepth?: number | undefined): void;
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  setError(e: unknown): void;
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  } & {
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  afterCreate(): void;
@@ -34,6 +35,7 @@ export declare function stateModelFactory(pluginManager: PluginManager): import(
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  track: import("mobx-state-tree").IMaybe<import("mobx-state-tree").IReferenceType<import("mobx-state-tree").IAnyType>>;
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  trackId: import("mobx-state-tree").IMaybe<import("mobx-state-tree").ISimpleType<string>>;
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  trackType: import("mobx-state-tree").IMaybe<import("mobx-state-tree").ISimpleType<string>>;
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+ maxDepth: import("mobx-state-tree").IMaybe<import("mobx-state-tree").ISimpleType<number>>;
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  }>> & import("mobx-state-tree/dist/internal").NonEmptyObject & import("mobx-state-tree")._NotCustomized, {
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  type: "BaseFeatureWidget";
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  id: string;
@@ -41,6 +43,7 @@ export declare function stateModelFactory(pluginManager: PluginManager): import(
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  view: import("mobx-state-tree").ReferenceIdentifier | undefined;
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  trackId: string | undefined;
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  trackType: string | undefined;
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+ maxDepth: number | undefined;
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  formattedFields: any;
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  finalizedFeatureData: any;
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  } & import("mobx-state-tree")._NotCustomized>;
package/dist/AlignmentsTrack/configSchemaF.d.ts CHANGED
@@ -58,6 +58,11 @@ export default function configSchemaFactory(pluginManager: PluginManager): impor
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  defaultValue: number;
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  description: string;
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  };
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+ maxDepth: {
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+ type: string;
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+ defaultValue: number;
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+ description: string;
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+ };
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  }, import("@jbrowse/core/configuration/configurationSchema").ConfigurationSchemaOptions<undefined, undefined>>;
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  formatAbout: import("@jbrowse/core/configuration/configurationSchema").ConfigurationSchemaType<{
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  config: {
package/dist/LinearSNPCoverageDisplay/models/configSchema.js CHANGED
@@ -39,7 +39,7 @@ function SNPCoverageConfigFactory(pluginManager) {
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  */
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  scaleType: {
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  type: 'stringEnum',
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- model: mobx_state_tree_1.types.enumeration('Scale type', ['linear', 'log']),
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+ model: mobx_state_tree_1.types.enumeration('Scale type', ['linear', 'log']), // todo zscale
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  description: 'The type of scale to use',
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  defaultValue: 'linear',
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  },
package/esm/AlignmentsFeatureDetail/index.d.ts CHANGED
@@ -10,6 +10,7 @@ export declare function stateModelFactory(pluginManager: PluginManager): import(
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  track: import("mobx-state-tree").IMaybe<import("mobx-state-tree").IReferenceType<import("mobx-state-tree").IAnyType>>;
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  trackId: import("mobx-state-tree").IMaybe<import("mobx-state-tree").ISimpleType<string>>;
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  trackType: import("mobx-state-tree").IMaybe<import("mobx-state-tree").ISimpleType<string>>;
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+ maxDepth: import("mobx-state-tree").IMaybe<import("mobx-state-tree").ISimpleType<number>>;
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  } & {
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  type: import("mobx-state-tree").ISimpleType<"AlignmentsFeatureWidget">;
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  }, {
@@ -18,7 +19,7 @@ export declare function stateModelFactory(pluginManager: PluginManager): import(
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  setFeatureData(featureData: Record<string, unknown>): void;
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  clearFeatureData(): void;
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  setFormattedData(feat: Record<string, unknown>): void;
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- setExtra(type?: string | undefined, trackId?: string | undefined): void;
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+ setExtra(type?: string | undefined, trackId?: string | undefined, maxDepth?: number | undefined): void;
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  setError(e: unknown): void;
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  } & {
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  afterCreate(): void;
@@ -34,6 +35,7 @@ export declare function stateModelFactory(pluginManager: PluginManager): import(
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  track: import("mobx-state-tree").IMaybe<import("mobx-state-tree").IReferenceType<import("mobx-state-tree").IAnyType>>;
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  trackId: import("mobx-state-tree").IMaybe<import("mobx-state-tree").ISimpleType<string>>;
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  trackType: import("mobx-state-tree").IMaybe<import("mobx-state-tree").ISimpleType<string>>;
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+ maxDepth: import("mobx-state-tree").IMaybe<import("mobx-state-tree").ISimpleType<number>>;
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  }>> & import("mobx-state-tree/dist/internal").NonEmptyObject & import("mobx-state-tree")._NotCustomized, {
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  type: "BaseFeatureWidget";
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  id: string;
@@ -41,6 +43,7 @@ export declare function stateModelFactory(pluginManager: PluginManager): import(
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  view: import("mobx-state-tree").ReferenceIdentifier | undefined;
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  trackId: string | undefined;
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  trackType: string | undefined;
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+ maxDepth: number | undefined;
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  formattedFields: any;
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  finalizedFeatureData: any;
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  } & import("mobx-state-tree")._NotCustomized>;
package/esm/AlignmentsTrack/configSchemaF.d.ts CHANGED
@@ -58,6 +58,11 @@ export default function configSchemaFactory(pluginManager: PluginManager): impor
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  defaultValue: number;
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  description: string;
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  };
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+ maxDepth: {
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+ type: string;
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+ defaultValue: number;
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+ description: string;
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+ };
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  }, import("@jbrowse/core/configuration/configurationSchema").ConfigurationSchemaOptions<undefined, undefined>>;
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  formatAbout: import("@jbrowse/core/configuration/configurationSchema").ConfigurationSchemaType<{
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  config: {
package/esm/LinearSNPCoverageDisplay/models/configSchema.js CHANGED
@@ -37,7 +37,7 @@ export default function SNPCoverageConfigFactory(pluginManager) {
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  */
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  scaleType: {
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  type: 'stringEnum',
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- model: types.enumeration('Scale type', ['linear', 'log']),
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+ model: types.enumeration('Scale type', ['linear', 'log']), // todo zscale
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  description: 'The type of scale to use',
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  defaultValue: 'linear',
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  },
package/package.json CHANGED
@@ -1,6 +1,6 @@
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  {
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  "name": "@jbrowse/plugin-alignments",
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- "version": "2.8.0",
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+ "version": "2.9.0",
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  "description": "JBrowse 2 alignments adapters, tracks, etc.",
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  "keywords": [
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  "jbrowse",
@@ -63,5 +63,5 @@
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  "distModule": "esm/index.js",
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  "srcModule": "src/index.ts",
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  "module": "esm/index.js",
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- "gitHead": "ee8c2bdc8bd4f1a70b1eefda984f04a2830d9ca0"
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+ "gitHead": "a50b6f67cf8c8f3c65a7b8cd858de2fcca1f2909"
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  }