@jbrowse/plugin-alignments 2.4.1 → 2.5.0

package/esm/NestedFrequencyTable.js

@@ -1,91 +0,0 @@
-/* eslint-disable @typescript-eslint/no-explicit-any */
-// see perf results on object.keys vs for-in loop
-// https://jsperf.com/object-keys-vs-hasownproperty/55
-export default class NestedFrequencyTable {
-    constructor(initialData = {}) {
-        this.categories = { ...initialData };
-    }
-    // get the sum of all the category counts
-    total() {
-        // calculate total if necessary
-        let t = 0;
-        for (const k in this.categories) {
-            const v = this.categories[k];
-            t += v.total ? v.total() : v;
-        }
-        return t;
-    }
-    // decrement the count for the given category
-    decrement(slotName, amount) {
-        if (!amount) {
-            amount = 1;
-        }
-        slotName = slotName ? slotName.toString() : 'default';
-        if (this.categories[slotName]) {
-            this.categories[slotName] = Math.max(0, this.categories[slotName] - amount);
-            return this.categories[slotName];
-        }
-        return 0;
-    }
-    // increment the count for the given category
-    increment(slotName, amount) {
-        if (!amount) {
-            amount = 1;
-        }
-        slotName = slotName ? slotName.toString() : 'default';
-        this.categories[slotName] = (this.categories[slotName] || 0) + amount;
-        return this.categories[slotName];
-    }
-    // get the value of the given category.  may be a number or a
-    // frequency table.
-    get(slotName) {
-        return this.categories[slotName] || 0;
-    }
-    // get a given category as a frequency table
-    getNested(path) {
-        if (typeof path === 'string') {
-            path = path.split('/');
-        }
-        if (path.length === 0) {
-            return this;
-        }
-        const slotName = path[0].toString();
-        let slot = this.categories[slotName];
-        if (!slot || !slot.categories) {
-            this.categories[slotName] = new NestedFrequencyTable(slot ? { default: slot + 0 } : {});
-        }
-        slot = this.categories[slotName];
-        if (path.length > 1) {
-            return slot.getNested(path.slice(1));
-        }
-        return slot;
-    }
-    toString() {
-        return this.total()
-            .toPrecision(6)
-            .toString()
-            .replace(/\.?0+$/, '');
-    }
-    valueOf() {
-        return this.total();
-    }
-    // iterate through the categories and counts, call like:
-    //
-    //   tbl.forEach( function( count, categoryName ) {
-    //      // do something
-    //   }, this );
-    //
-    forEach(func, ctx) {
-        if (ctx) {
-            for (const slotName in this.categories) {
-                func.call(ctx, this.categories[slotName], slotName);
-            }
-        }
-        else {
-            for (const slotName in this.categories) {
-                func(this.categories[slotName], slotName);
-            }
-        }
-    }
-}
-//# sourceMappingURL=NestedFrequencyTable.js.map

package/esm/NestedFrequencyTable.js.map

@@ -1 +0,0 @@
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package/src/NestedFrequencyTable.ts

@@ -1,113 +0,0 @@
-/* eslint-disable @typescript-eslint/no-explicit-any */
-// see perf results on object.keys vs for-in loop
-// https://jsperf.com/object-keys-vs-hasownproperty/55
-export default class NestedFrequencyTable {
-  public categories: { [key: string]: any }
-
-  constructor(initialData = {}) {
-    this.categories = { ...initialData }
-  }
-
-  // get the sum of all the category counts
-  total() {
-    // calculate total if necessary
-    let t = 0
-
-    for (const k in this.categories) {
-      const v = this.categories[k]
-      t += v.total ? v.total() : v
-    }
-
-    return t
-  }
-
-  // decrement the count for the given category
-  decrement(slotName: string, amount: number) {
-    if (!amount) {
-      amount = 1
-    }
-
-    slotName = slotName ? slotName.toString() : 'default'
-
-    if (this.categories[slotName]) {
-      this.categories[slotName] = Math.max(
-        0,
-        this.categories[slotName] - amount,
-      )
-      return this.categories[slotName]
-    }
-    return 0
-  }
-
-  // increment the count for the given category
-  increment(slotName: string, amount: number) {
-    if (!amount) {
-      amount = 1
-    }
-
-    slotName = slotName ? slotName.toString() : 'default'
-
-    this.categories[slotName] = (this.categories[slotName] || 0) + amount
-    return this.categories[slotName]
-  }
-
-  // get the value of the given category.  may be a number or a
-  // frequency table.
-  get(slotName: string) {
-    return this.categories[slotName] || 0
-  }
-
-  // get a given category as a frequency table
-  getNested(path: string | string[]) {
-    if (typeof path === 'string') {
-      path = path.split('/')
-    }
-
-    if (path.length === 0) {
-      return this
-    }
-
-    const slotName = path[0].toString()
-    let slot = this.categories[slotName]
-    if (!slot || !slot.categories) {
-      this.categories[slotName] = new NestedFrequencyTable(
-        slot ? { default: slot + 0 } : {},
-      )
-    }
-    slot = this.categories[slotName]
-
-    if (path.length > 1) {
-      return slot.getNested(path.slice(1))
-    }
-    return slot
-  }
-
-  toString() {
-    return this.total()
-      .toPrecision(6)
-      .toString()
-      .replace(/\.?0+$/, '')
-  }
-
-  valueOf() {
-    return this.total()
-  }
-
-  // iterate through the categories and counts, call like:
-  //
-  //   tbl.forEach( function( count, categoryName ) {
-  //      // do something
-  //   }, this );
-  //
-  forEach(func: Function, ctx: any) {
-    if (ctx) {
-      for (const slotName in this.categories) {
-        func.call(ctx, this.categories[slotName], slotName)
-      }
-    } else {
-      for (const slotName in this.categories) {
-        func(this.categories[slotName], slotName)
-      }
-    }
-  }
-}