@jbrowse/plugin-alignments 2.2.2 → 2.3.0

This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
Files changed (308) hide show
  1. package/dist/AlignmentsFeatureDetail/AlignmentsFeatureDetail.js +1 -1
  2. package/dist/AlignmentsFeatureDetail/AlignmentsFeatureDetail.js.map +1 -1
  3. package/dist/AlignmentsTrack/index.js +1 -0
  4. package/dist/AlignmentsTrack/index.js.map +1 -1
  5. package/dist/BamAdapter/BamSlightlyLazyFeature.d.ts +3 -4
  6. package/dist/BamAdapter/BamSlightlyLazyFeature.js +11 -18
  7. package/dist/BamAdapter/BamSlightlyLazyFeature.js.map +1 -1
  8. package/dist/BamAdapter/index.js +1 -0
  9. package/dist/BamAdapter/index.js.map +1 -1
  10. package/dist/CramAdapter/CramSlightlyLazyFeature.d.ts +5 -7
  11. package/dist/CramAdapter/CramSlightlyLazyFeature.js +6 -8
  12. package/dist/CramAdapter/CramSlightlyLazyFeature.js.map +1 -1
  13. package/dist/CramAdapter/index.js +1 -0
  14. package/dist/CramAdapter/index.js.map +1 -1
  15. package/dist/GuessAlignmentsTypes/index.d.ts +3 -0
  16. package/dist/GuessAlignmentsTypes/index.js +56 -0
  17. package/dist/GuessAlignmentsTypes/index.js.map +1 -0
  18. package/dist/HtsgetBamAdapter/index.js +11 -11
  19. package/dist/HtsgetBamAdapter/index.js.map +1 -1
  20. package/dist/LinearAlignmentsDisplay/components/AlignmentsDisplay.js +10 -13
  21. package/dist/LinearAlignmentsDisplay/components/AlignmentsDisplay.js.map +1 -1
  22. package/dist/LinearAlignmentsDisplay/index.js +1 -0
  23. package/dist/LinearAlignmentsDisplay/index.js.map +1 -1
  24. package/dist/LinearAlignmentsDisplay/models/configSchema.d.ts +6 -3
  25. package/dist/LinearAlignmentsDisplay/models/configSchema.js +2 -3
  26. package/dist/LinearAlignmentsDisplay/models/configSchema.js.map +1 -1
  27. package/dist/LinearAlignmentsDisplay/models/model.d.ts +22 -36
  28. package/dist/LinearAlignmentsDisplay/models/model.js +166 -151
  29. package/dist/LinearAlignmentsDisplay/models/model.js.map +1 -1
  30. package/dist/LinearPileupDisplay/components/SetFeatureHeight.d.ts +2 -2
  31. package/dist/LinearPileupDisplay/components/SetFeatureHeight.js +2 -4
  32. package/dist/LinearPileupDisplay/components/SetFeatureHeight.js.map +1 -1
  33. package/dist/LinearPileupDisplay/configSchema.d.ts +0 -3
  34. package/dist/LinearPileupDisplay/configSchema.js.map +1 -1
  35. package/dist/LinearPileupDisplay/index.js +2 -0
  36. package/dist/LinearPileupDisplay/index.js.map +1 -1
  37. package/dist/LinearPileupDisplay/model.d.ts +19 -16
  38. package/dist/LinearPileupDisplay/model.js +28 -13
  39. package/dist/LinearPileupDisplay/model.js.map +1 -1
  40. package/dist/LinearReadArcsDisplay/components/ReactComponent.d.ts +6 -0
  41. package/dist/LinearReadArcsDisplay/components/ReactComponent.js +49 -0
  42. package/dist/LinearReadArcsDisplay/components/ReactComponent.js.map +1 -0
  43. package/dist/LinearReadArcsDisplay/configSchema.d.ts +6 -0
  44. package/dist/LinearReadArcsDisplay/configSchema.js +52 -0
  45. package/dist/LinearReadArcsDisplay/configSchema.js.map +1 -0
  46. package/dist/LinearReadArcsDisplay/drawFeats.d.ts +14 -0
  47. package/dist/LinearReadArcsDisplay/drawFeats.js +162 -0
  48. package/dist/LinearReadArcsDisplay/drawFeats.js.map +1 -0
  49. package/dist/LinearReadArcsDisplay/index.d.ts +2 -0
  50. package/dist/LinearReadArcsDisplay/index.js +27 -0
  51. package/dist/LinearReadArcsDisplay/index.js.map +1 -0
  52. package/dist/LinearReadArcsDisplay/model.d.ts +342 -0
  53. package/dist/LinearReadArcsDisplay/model.js +327 -0
  54. package/dist/LinearReadArcsDisplay/model.js.map +1 -0
  55. package/dist/LinearReadCloudDisplay/components/ReactComponent.d.ts +6 -0
  56. package/dist/LinearReadCloudDisplay/components/ReactComponent.js +49 -0
  57. package/dist/LinearReadCloudDisplay/components/ReactComponent.js.map +1 -0
  58. package/dist/LinearReadCloudDisplay/configSchema.d.ts +6 -0
  59. package/dist/LinearReadCloudDisplay/configSchema.js +51 -0
  60. package/dist/LinearReadCloudDisplay/configSchema.js.map +1 -0
  61. package/dist/LinearReadCloudDisplay/drawFeats.d.ts +10 -0
  62. package/dist/LinearReadCloudDisplay/drawFeats.js +159 -0
  63. package/dist/LinearReadCloudDisplay/drawFeats.js.map +1 -0
  64. package/dist/LinearReadCloudDisplay/index.d.ts +2 -0
  65. package/dist/LinearReadCloudDisplay/index.js +27 -0
  66. package/dist/LinearReadCloudDisplay/index.js.map +1 -0
  67. package/dist/LinearReadCloudDisplay/model.d.ts +320 -0
  68. package/dist/LinearReadCloudDisplay/model.js +252 -0
  69. package/dist/LinearReadCloudDisplay/model.js.map +1 -0
  70. package/dist/LinearSNPCoverageDisplay/index.js +1 -0
  71. package/dist/LinearSNPCoverageDisplay/index.js.map +1 -1
  72. package/dist/LinearSNPCoverageDisplay/models/model.d.ts +19 -20
  73. package/dist/LinearSNPCoverageDisplay/models/model.js +1 -6
  74. package/dist/LinearSNPCoverageDisplay/models/model.js.map +1 -1
  75. package/dist/{BamAdapter/MismatchParser.d.ts → MismatchParser/index.d.ts} +23 -0
  76. package/dist/{BamAdapter/MismatchParser.js → MismatchParser/index.js} +116 -3
  77. package/dist/MismatchParser/index.js.map +1 -0
  78. package/dist/PileupRPC/base.d.ts +8 -0
  79. package/dist/PileupRPC/base.js +22 -0
  80. package/dist/PileupRPC/base.js.map +1 -0
  81. package/dist/PileupRPC/index.d.ts +3 -0
  82. package/dist/PileupRPC/index.js +9 -0
  83. package/dist/PileupRPC/index.js.map +1 -0
  84. package/dist/PileupRPC/methods/GetGlobalValueForTag.d.ts +14 -0
  85. package/dist/PileupRPC/methods/GetGlobalValueForTag.js +29 -0
  86. package/dist/PileupRPC/methods/GetGlobalValueForTag.js.map +1 -0
  87. package/dist/PileupRPC/methods/GetReducedFeatures.d.ts +25 -0
  88. package/dist/PileupRPC/methods/GetReducedFeatures.js +61 -0
  89. package/dist/PileupRPC/methods/GetReducedFeatures.js.map +1 -0
  90. package/dist/PileupRPC/methods/GetVisibleModifications.d.ts +14 -0
  91. package/dist/PileupRPC/methods/GetVisibleModifications.js +32 -0
  92. package/dist/PileupRPC/methods/GetVisibleModifications.js.map +1 -0
  93. package/dist/PileupRPC/rpcMethods.d.ts +4 -34
  94. package/dist/PileupRPC/rpcMethods.js +7 -77
  95. package/dist/PileupRPC/rpcMethods.js.map +1 -1
  96. package/dist/PileupRPC/util.d.ts +8 -0
  97. package/dist/PileupRPC/util.js +20 -0
  98. package/dist/PileupRPC/util.js.map +1 -0
  99. package/dist/PileupRenderer/PileupRenderer.d.ts +1 -1
  100. package/dist/PileupRenderer/PileupRenderer.js +5 -5
  101. package/dist/PileupRenderer/PileupRenderer.js.map +1 -1
  102. package/dist/PileupRenderer/index.js +1 -0
  103. package/dist/PileupRenderer/index.js.map +1 -1
  104. package/dist/PileupRenderer/sortUtil.d.ts +1 -1
  105. package/dist/PileupRenderer/sortUtil.js +2 -2
  106. package/dist/PileupRenderer/sortUtil.js.map +1 -1
  107. package/dist/SNPCoverageAdapter/generateCoverageBins.js +1 -1
  108. package/dist/SNPCoverageAdapter/generateCoverageBins.js.map +1 -1
  109. package/dist/SNPCoverageAdapter/index.js +1 -3
  110. package/dist/SNPCoverageAdapter/index.js.map +1 -1
  111. package/dist/index.d.ts +2 -2
  112. package/dist/index.js +12 -58
  113. package/dist/index.js.map +1 -1
  114. package/dist/{LinearPileupDisplay/components → shared}/FilterByTag.d.ts +0 -0
  115. package/dist/{LinearPileupDisplay/components → shared}/FilterByTag.js +3 -9
  116. package/dist/shared/FilterByTag.js.map +1 -0
  117. package/dist/shared/color.d.ts +17 -0
  118. package/dist/shared/color.js +43 -0
  119. package/dist/shared/color.js.map +1 -0
  120. package/dist/shared/fetchChains.d.ts +27 -0
  121. package/dist/shared/fetchChains.js +30 -0
  122. package/dist/shared/fetchChains.js.map +1 -0
  123. package/dist/shared/index.d.ts +36 -0
  124. package/dist/{shared.js → shared/index.js} +12 -2
  125. package/dist/shared/index.js.map +1 -0
  126. package/esm/AlignmentsFeatureDetail/AlignmentsFeatureDetail.js +1 -1
  127. package/esm/AlignmentsFeatureDetail/AlignmentsFeatureDetail.js.map +1 -1
  128. package/esm/AlignmentsTrack/index.js +1 -0
  129. package/esm/AlignmentsTrack/index.js.map +1 -1
  130. package/esm/BamAdapter/BamSlightlyLazyFeature.d.ts +3 -4
  131. package/esm/BamAdapter/BamSlightlyLazyFeature.js +11 -18
  132. package/esm/BamAdapter/BamSlightlyLazyFeature.js.map +1 -1
  133. package/esm/BamAdapter/index.js +1 -0
  134. package/esm/BamAdapter/index.js.map +1 -1
  135. package/esm/CramAdapter/CramSlightlyLazyFeature.d.ts +5 -7
  136. package/esm/CramAdapter/CramSlightlyLazyFeature.js +6 -8
  137. package/esm/CramAdapter/CramSlightlyLazyFeature.js.map +1 -1
  138. package/esm/CramAdapter/index.js +1 -0
  139. package/esm/CramAdapter/index.js.map +1 -1
  140. package/esm/GuessAlignmentsTypes/index.d.ts +3 -0
  141. package/esm/GuessAlignmentsTypes/index.js +54 -0
  142. package/esm/GuessAlignmentsTypes/index.js.map +1 -0
  143. package/esm/HtsgetBamAdapter/index.js +11 -11
  144. package/esm/HtsgetBamAdapter/index.js.map +1 -1
  145. package/esm/LinearAlignmentsDisplay/components/AlignmentsDisplay.js +10 -13
  146. package/esm/LinearAlignmentsDisplay/components/AlignmentsDisplay.js.map +1 -1
  147. package/esm/LinearAlignmentsDisplay/index.js +1 -0
  148. package/esm/LinearAlignmentsDisplay/index.js.map +1 -1
  149. package/esm/LinearAlignmentsDisplay/models/configSchema.d.ts +6 -3
  150. package/esm/LinearAlignmentsDisplay/models/configSchema.js +2 -4
  151. package/esm/LinearAlignmentsDisplay/models/configSchema.js.map +1 -1
  152. package/esm/LinearAlignmentsDisplay/models/model.d.ts +22 -36
  153. package/esm/LinearAlignmentsDisplay/models/model.js +167 -152
  154. package/esm/LinearAlignmentsDisplay/models/model.js.map +1 -1
  155. package/esm/LinearPileupDisplay/components/SetFeatureHeight.d.ts +2 -2
  156. package/esm/LinearPileupDisplay/components/SetFeatureHeight.js +2 -4
  157. package/esm/LinearPileupDisplay/components/SetFeatureHeight.js.map +1 -1
  158. package/esm/LinearPileupDisplay/configSchema.d.ts +0 -3
  159. package/esm/LinearPileupDisplay/configSchema.js.map +1 -1
  160. package/esm/LinearPileupDisplay/index.js +2 -0
  161. package/esm/LinearPileupDisplay/index.js.map +1 -1
  162. package/esm/LinearPileupDisplay/model.d.ts +19 -16
  163. package/esm/LinearPileupDisplay/model.js +29 -14
  164. package/esm/LinearPileupDisplay/model.js.map +1 -1
  165. package/esm/LinearReadArcsDisplay/components/ReactComponent.d.ts +6 -0
  166. package/esm/LinearReadArcsDisplay/components/ReactComponent.js +44 -0
  167. package/esm/LinearReadArcsDisplay/components/ReactComponent.js.map +1 -0
  168. package/esm/LinearReadArcsDisplay/configSchema.d.ts +6 -0
  169. package/esm/LinearReadArcsDisplay/configSchema.js +50 -0
  170. package/esm/LinearReadArcsDisplay/configSchema.js.map +1 -0
  171. package/esm/LinearReadArcsDisplay/drawFeats.d.ts +14 -0
  172. package/esm/LinearReadArcsDisplay/drawFeats.js +157 -0
  173. package/esm/LinearReadArcsDisplay/drawFeats.js.map +1 -0
  174. package/esm/LinearReadArcsDisplay/index.d.ts +2 -0
  175. package/esm/LinearReadArcsDisplay/index.js +21 -0
  176. package/esm/LinearReadArcsDisplay/index.js.map +1 -0
  177. package/esm/LinearReadArcsDisplay/model.d.ts +342 -0
  178. package/esm/LinearReadArcsDisplay/model.js +299 -0
  179. package/esm/LinearReadArcsDisplay/model.js.map +1 -0
  180. package/esm/LinearReadCloudDisplay/components/ReactComponent.d.ts +6 -0
  181. package/esm/LinearReadCloudDisplay/components/ReactComponent.js +44 -0
  182. package/esm/LinearReadCloudDisplay/components/ReactComponent.js.map +1 -0
  183. package/esm/LinearReadCloudDisplay/configSchema.d.ts +6 -0
  184. package/esm/LinearReadCloudDisplay/configSchema.js +49 -0
  185. package/esm/LinearReadCloudDisplay/configSchema.js.map +1 -0
  186. package/esm/LinearReadCloudDisplay/drawFeats.d.ts +10 -0
  187. package/esm/LinearReadCloudDisplay/drawFeats.js +156 -0
  188. package/esm/LinearReadCloudDisplay/drawFeats.js.map +1 -0
  189. package/esm/LinearReadCloudDisplay/index.d.ts +2 -0
  190. package/esm/LinearReadCloudDisplay/index.js +21 -0
  191. package/esm/LinearReadCloudDisplay/index.js.map +1 -0
  192. package/esm/LinearReadCloudDisplay/model.d.ts +320 -0
  193. package/esm/LinearReadCloudDisplay/model.js +224 -0
  194. package/esm/LinearReadCloudDisplay/model.js.map +1 -0
  195. package/esm/LinearSNPCoverageDisplay/index.js +1 -0
  196. package/esm/LinearSNPCoverageDisplay/index.js.map +1 -1
  197. package/esm/LinearSNPCoverageDisplay/models/model.d.ts +19 -20
  198. package/esm/LinearSNPCoverageDisplay/models/model.js +2 -7
  199. package/esm/LinearSNPCoverageDisplay/models/model.js.map +1 -1
  200. package/esm/{BamAdapter/MismatchParser.d.ts → MismatchParser/index.d.ts} +23 -0
  201. package/esm/{BamAdapter/MismatchParser.js → MismatchParser/index.js} +107 -2
  202. package/esm/MismatchParser/index.js.map +1 -0
  203. package/esm/PileupRPC/base.d.ts +8 -0
  204. package/esm/PileupRPC/base.js +16 -0
  205. package/esm/PileupRPC/base.js.map +1 -0
  206. package/esm/PileupRPC/index.d.ts +3 -0
  207. package/esm/PileupRPC/index.js +7 -0
  208. package/esm/PileupRPC/index.js.map +1 -0
  209. package/esm/PileupRPC/methods/GetGlobalValueForTag.d.ts +14 -0
  210. package/esm/PileupRPC/methods/GetGlobalValueForTag.js +23 -0
  211. package/esm/PileupRPC/methods/GetGlobalValueForTag.js.map +1 -0
  212. package/esm/PileupRPC/methods/GetReducedFeatures.d.ts +25 -0
  213. package/esm/PileupRPC/methods/GetReducedFeatures.js +55 -0
  214. package/esm/PileupRPC/methods/GetReducedFeatures.js.map +1 -0
  215. package/esm/PileupRPC/methods/GetVisibleModifications.d.ts +14 -0
  216. package/esm/PileupRPC/methods/GetVisibleModifications.js +26 -0
  217. package/esm/PileupRPC/methods/GetVisibleModifications.js.map +1 -0
  218. package/esm/PileupRPC/rpcMethods.d.ts +4 -34
  219. package/esm/PileupRPC/rpcMethods.js +4 -74
  220. package/esm/PileupRPC/rpcMethods.js.map +1 -1
  221. package/esm/PileupRPC/util.d.ts +8 -0
  222. package/esm/PileupRPC/util.js +15 -0
  223. package/esm/PileupRPC/util.js.map +1 -0
  224. package/esm/PileupRenderer/PileupRenderer.d.ts +1 -1
  225. package/esm/PileupRenderer/PileupRenderer.js +5 -5
  226. package/esm/PileupRenderer/PileupRenderer.js.map +1 -1
  227. package/esm/PileupRenderer/index.js +1 -0
  228. package/esm/PileupRenderer/index.js.map +1 -1
  229. package/esm/PileupRenderer/sortUtil.d.ts +1 -1
  230. package/esm/PileupRenderer/sortUtil.js +1 -1
  231. package/esm/PileupRenderer/sortUtil.js.map +1 -1
  232. package/esm/SNPCoverageAdapter/generateCoverageBins.js +1 -1
  233. package/esm/SNPCoverageAdapter/generateCoverageBins.js.map +1 -1
  234. package/esm/SNPCoverageAdapter/index.js +1 -3
  235. package/esm/SNPCoverageAdapter/index.js.map +1 -1
  236. package/esm/index.d.ts +2 -2
  237. package/esm/index.js +10 -56
  238. package/esm/index.js.map +1 -1
  239. package/esm/{LinearPileupDisplay/components → shared}/FilterByTag.d.ts +0 -0
  240. package/esm/{LinearPileupDisplay/components → shared}/FilterByTag.js +3 -9
  241. package/esm/shared/FilterByTag.js.map +1 -0
  242. package/esm/shared/color.d.ts +17 -0
  243. package/esm/shared/color.js +37 -0
  244. package/esm/shared/color.js.map +1 -0
  245. package/esm/shared/fetchChains.d.ts +27 -0
  246. package/esm/shared/fetchChains.js +26 -0
  247. package/esm/shared/fetchChains.js.map +1 -0
  248. package/esm/shared/index.d.ts +36 -0
  249. package/esm/{shared.js → shared/index.js} +11 -1
  250. package/esm/shared/index.js.map +1 -0
  251. package/package.json +4 -4
  252. package/src/AlignmentsFeatureDetail/AlignmentsFeatureDetail.tsx +1 -1
  253. package/src/AlignmentsTrack/index.ts +1 -0
  254. package/src/BamAdapter/BamSlightlyLazyFeature.ts +13 -19
  255. package/src/BamAdapter/index.ts +1 -0
  256. package/src/CramAdapter/CramSlightlyLazyFeature.ts +13 -15
  257. package/src/CramAdapter/__snapshots__/CramAdapter.test.ts.snap +0 -10
  258. package/src/CramAdapter/index.ts +1 -0
  259. package/src/GuessAlignmentsTypes/index.ts +79 -0
  260. package/src/HtsgetBamAdapter/index.ts +11 -15
  261. package/src/LinearAlignmentsDisplay/components/AlignmentsDisplay.tsx +21 -29
  262. package/src/LinearAlignmentsDisplay/index.ts +1 -0
  263. package/src/LinearAlignmentsDisplay/models/configSchema.ts +2 -6
  264. package/src/LinearAlignmentsDisplay/models/model.tsx +238 -199
  265. package/src/LinearPileupDisplay/components/SetFeatureHeight.tsx +4 -6
  266. package/src/LinearPileupDisplay/configSchema.ts +1 -3
  267. package/src/LinearPileupDisplay/index.ts +2 -0
  268. package/src/LinearPileupDisplay/model.ts +36 -23
  269. package/src/LinearReadArcsDisplay/components/ReactComponent.tsx +86 -0
  270. package/src/LinearReadArcsDisplay/configSchema.ts +58 -0
  271. package/src/LinearReadArcsDisplay/declare.d.ts +1 -0
  272. package/src/LinearReadArcsDisplay/drawFeats.ts +199 -0
  273. package/src/LinearReadArcsDisplay/index.ts +23 -0
  274. package/src/LinearReadArcsDisplay/model.tsx +370 -0
  275. package/src/LinearReadCloudDisplay/components/ReactComponent.tsx +86 -0
  276. package/src/LinearReadCloudDisplay/configSchema.ts +57 -0
  277. package/src/LinearReadCloudDisplay/drawFeats.ts +201 -0
  278. package/src/LinearReadCloudDisplay/index.ts +23 -0
  279. package/src/LinearReadCloudDisplay/model.tsx +289 -0
  280. package/src/LinearSNPCoverageDisplay/index.ts +1 -0
  281. package/src/LinearSNPCoverageDisplay/models/model.ts +3 -13
  282. package/src/{BamAdapter/MismatchParser.test.ts → MismatchParser/index.test.ts} +1 -1
  283. package/src/{BamAdapter/MismatchParser.ts → MismatchParser/index.ts} +129 -2
  284. package/src/PileupRPC/base.ts +24 -0
  285. package/src/PileupRPC/index.ts +12 -0
  286. package/src/PileupRPC/methods/GetGlobalValueForTag.ts +41 -0
  287. package/src/PileupRPC/methods/GetReducedFeatures.ts +76 -0
  288. package/src/PileupRPC/methods/GetVisibleModifications.ts +45 -0
  289. package/src/PileupRPC/rpcMethods.ts +8 -113
  290. package/src/PileupRPC/util.ts +19 -0
  291. package/src/PileupRenderer/PileupRenderer.ts +5 -8
  292. package/src/PileupRenderer/index.ts +1 -0
  293. package/src/PileupRenderer/sortUtil.ts +2 -3
  294. package/src/SNPCoverageAdapter/generateCoverageBins.ts +1 -1
  295. package/src/SNPCoverageAdapter/index.ts +1 -3
  296. package/src/index.ts +12 -93
  297. package/src/{LinearPileupDisplay/components → shared}/FilterByTag.tsx +3 -9
  298. package/src/shared/color.ts +47 -0
  299. package/src/shared/fetchChains.ts +63 -0
  300. package/src/{shared.ts → shared/index.ts} +17 -4
  301. package/dist/BamAdapter/MismatchParser.js.map +0 -1
  302. package/dist/LinearPileupDisplay/components/FilterByTag.js.map +0 -1
  303. package/dist/shared.d.ts +0 -25
  304. package/dist/shared.js.map +0 -1
  305. package/esm/BamAdapter/MismatchParser.js.map +0 -1
  306. package/esm/LinearPileupDisplay/components/FilterByTag.js.map +0 -1
  307. package/esm/shared.d.ts +0 -25
  308. package/esm/shared.js.map +0 -1
@@ -0,0 +1,342 @@
1
+ import React from 'react';
2
+ import { Instance } from 'mobx-state-tree';
3
+ import { AnyConfigurationSchemaType } from '@jbrowse/core/configuration';
4
+ import { ChainData } from '../shared/fetchChains';
5
+ import { ExportSvgOptions } from '@jbrowse/plugin-linear-genome-view/src/LinearGenomeView';
6
+ interface Filter {
7
+ flagInclude: number;
8
+ flagExclude: number;
9
+ readName?: string;
10
+ tagFilter?: {
11
+ tag: string;
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+ value: string;
13
+ };
14
+ }
15
+ /**
16
+ * #stateModel LinearReadArcsDisplay
17
+ * extends `BaseLinearDisplay`
18
+ */
19
+ declare function stateModelFactory(configSchema: AnyConfigurationSchemaType): import("mobx-state-tree").IModelType<{
20
+ id: import("mobx-state-tree").IOptionalIType<import("mobx-state-tree").ISimpleType<string>, [undefined]>;
21
+ type: import("mobx-state-tree").ISimpleType<string>;
22
+ rpcDriverName: import("mobx-state-tree").IMaybe<import("mobx-state-tree").ISimpleType<string>>;
23
+ } & {
24
+ height: import("mobx-state-tree").IOptionalIType<import("mobx-state-tree").ISimpleType<number>, [undefined]>;
25
+ blockState: import("mobx-state-tree").IMapType<import("mobx-state-tree").IModelType<{
26
+ key: import("mobx-state-tree").ISimpleType<string>;
27
+ region: import("mobx-state-tree").IModelType<{
28
+ refName: import("mobx-state-tree").ISimpleType<string>;
29
+ start: import("mobx-state-tree").ISimpleType<number>;
30
+ end: import("mobx-state-tree").ISimpleType<number>;
31
+ reversed: import("mobx-state-tree").IOptionalIType<import("mobx-state-tree").ISimpleType<boolean>, [undefined]>;
32
+ } & {
33
+ assemblyName: import("mobx-state-tree").ISimpleType<string>;
34
+ }, {
35
+ setRefName(newRefName: string): void;
36
+ }, import("mobx-state-tree")._NotCustomized, import("mobx-state-tree")._NotCustomized>;
37
+ reloadFlag: import("mobx-state-tree").IType<number | undefined, number, number>;
38
+ isLeftEndOfDisplayedRegion: import("mobx-state-tree").IType<boolean | undefined, boolean, boolean>;
39
+ isRightEndOfDisplayedRegion: import("mobx-state-tree").IType<boolean | undefined, boolean, boolean>;
40
+ }, {
41
+ renderInProgress: AbortController | undefined;
42
+ filled: boolean;
43
+ reactElement: React.ReactElement<any, string | React.JSXElementConstructor<any>> | undefined;
44
+ features: Map<string, import("@jbrowse/core/util").Feature> | undefined;
45
+ layout: any;
46
+ status: string;
47
+ error: unknown;
48
+ message: string | undefined;
49
+ maxHeightReached: boolean;
50
+ ReactComponent: ({ model, }: {
51
+ model: any;
52
+ }) => any;
53
+ renderProps: any;
54
+ } & {
55
+ doReload(): void;
56
+ afterAttach(): void;
57
+ setStatus(message: string): void;
58
+ setLoading(abortController: AbortController): void;
59
+ setMessage(messageText: string): void;
60
+ setRendered(props: {
61
+ reactElement: React.ReactElement<any, string | React.JSXElementConstructor<any>>;
62
+ features: Map<string, import("@jbrowse/core/util").Feature>;
63
+ layout: any; /**
64
+ * #action
65
+ */
66
+ maxHeightReached: boolean;
67
+ renderProps: any;
68
+ } | undefined): void;
69
+ setError(error: unknown): void;
70
+ reload(): void;
71
+ beforeDestroy(): void;
72
+ }, import("mobx-state-tree")._NotCustomized, import("mobx-state-tree")._NotCustomized>>;
73
+ userBpPerPxLimit: import("mobx-state-tree").IMaybe<import("mobx-state-tree").ISimpleType<number>>;
74
+ userByteSizeLimit: import("mobx-state-tree").IMaybe<import("mobx-state-tree").ISimpleType<number>>;
75
+ } & {
76
+ type: import("mobx-state-tree").ISimpleType<"LinearReadArcsDisplay">;
77
+ configuration: import("mobx-state-tree").ITypeUnion<any, any, any>;
78
+ filterBy: import("mobx-state-tree").IOptionalIType<import("mobx-state-tree").IModelType<{
79
+ flagInclude: import("mobx-state-tree").IOptionalIType<import("mobx-state-tree").ISimpleType<number>, [undefined]>;
80
+ flagExclude: import("mobx-state-tree").IOptionalIType<import("mobx-state-tree").ISimpleType<number>, [undefined]>;
81
+ readName: import("mobx-state-tree").IMaybe<import("mobx-state-tree").ISimpleType<string>>;
82
+ tagFilter: import("mobx-state-tree").IMaybe<import("mobx-state-tree").IModelType<{
83
+ tag: import("mobx-state-tree").ISimpleType<string>;
84
+ value: import("mobx-state-tree").ISimpleType<string>;
85
+ }, {}, import("mobx-state-tree")._NotCustomized, import("mobx-state-tree")._NotCustomized>>;
86
+ }, {}, import("mobx-state-tree")._NotCustomized, import("mobx-state-tree")._NotCustomized>, [undefined]>;
87
+ lineWidth: import("mobx-state-tree").IMaybe<import("mobx-state-tree").ISimpleType<number>>;
88
+ colorBy: import("mobx-state-tree").IMaybe<import("mobx-state-tree").IModelType<{
89
+ type: import("mobx-state-tree").ISimpleType<string>;
90
+ tag: import("mobx-state-tree").IMaybe<import("mobx-state-tree").ISimpleType<string>>;
91
+ extra: import("mobx-state-tree").IType<any, any, any>;
92
+ }, {}, import("mobx-state-tree")._NotCustomized, import("mobx-state-tree")._NotCustomized>>;
93
+ drawInter: import("mobx-state-tree").IType<boolean | undefined, boolean, boolean>;
94
+ drawLongRange: import("mobx-state-tree").IType<boolean | undefined, boolean, boolean>;
95
+ }, {
96
+ rendererTypeName: string;
97
+ error: unknown; /**
98
+ * #action
99
+ * thin, bold, extrabold, etc
100
+ */
101
+ } & {
102
+ readonly RenderingComponent: React.FC<{
103
+ model: {
104
+ id: string;
105
+ type: string;
106
+ rpcDriverName: string | undefined;
107
+ } & import("mobx-state-tree/dist/internal").NonEmptyObject & {
108
+ rendererTypeName: string;
109
+ error: unknown; /**
110
+ * #getter
111
+ */
112
+ } & import("mobx-state-tree").IStateTreeNode<import("mobx-state-tree").IModelType<{
113
+ id: import("mobx-state-tree").IOptionalIType<import("mobx-state-tree").ISimpleType<string>, [undefined]>;
114
+ type: import("mobx-state-tree").ISimpleType<string>;
115
+ rpcDriverName: import("mobx-state-tree").IMaybe<import("mobx-state-tree").ISimpleType<string>>;
116
+ }, {
117
+ rendererTypeName: string;
118
+ error: unknown;
119
+ }, import("mobx-state-tree")._NotCustomized, import("mobx-state-tree")._NotCustomized>>;
120
+ onHorizontalScroll?: Function | undefined;
121
+ blockState?: Record<string, any> | undefined;
122
+ }>;
123
+ readonly DisplayBlurb: React.FC<{
124
+ model: {
125
+ id: string;
126
+ type: string;
127
+ rpcDriverName: string | undefined;
128
+ } & import("mobx-state-tree/dist/internal").NonEmptyObject & {
129
+ rendererTypeName: string;
130
+ error: unknown;
131
+ } & import("mobx-state-tree").IStateTreeNode<import("mobx-state-tree").IModelType<{
132
+ id: import("mobx-state-tree").IOptionalIType<import("mobx-state-tree").ISimpleType<string>, [undefined]>;
133
+ type: import("mobx-state-tree").ISimpleType<string>;
134
+ rpcDriverName: import("mobx-state-tree").IMaybe<import("mobx-state-tree").ISimpleType<string>>;
135
+ }, {
136
+ rendererTypeName: string;
137
+ error: unknown;
138
+ }, import("mobx-state-tree")._NotCustomized, import("mobx-state-tree")._NotCustomized>>;
139
+ }> | null;
140
+ readonly adapterConfig: any;
141
+ readonly parentTrack: any;
142
+ renderProps(): any;
143
+ readonly rendererType: import("@jbrowse/core/pluggableElementTypes").RendererType;
144
+ readonly DisplayMessageComponent: React.FC<any> | undefined;
145
+ trackMenuItems(): import("@jbrowse/core/ui").MenuItem[];
146
+ readonly viewMenuActions: import("@jbrowse/core/ui").MenuItem[];
147
+ regionCannotBeRendered(): undefined;
148
+ } & {
149
+ setError(error?: unknown): void;
150
+ setRpcDriverName(rpcDriverName: string): void;
151
+ reload(): void;
152
+ } & {
153
+ currBpPerPx: number;
154
+ scrollTop: number;
155
+ message: string;
156
+ featureIdUnderMouse: string | undefined;
157
+ contextMenuFeature: import("@jbrowse/core/util").Feature | undefined;
158
+ estimatedRegionStatsP: Promise<import("@jbrowse/core/data_adapters/BaseAdapter").Stats> | undefined;
159
+ estimatedRegionStats: import("@jbrowse/core/data_adapters/BaseAdapter").Stats | undefined;
160
+ } & {
161
+ readonly blockType: "dynamicBlocks" | "staticBlocks";
162
+ readonly blockDefinitions: import("@jbrowse/core/util/blockTypes").BlockSet;
163
+ } & {
164
+ readonly renderDelay: number;
165
+ readonly TooltipComponent: React.FC<any>;
166
+ readonly selectedFeatureId: string | undefined;
167
+ readonly DisplayMessageComponent: React.FC<any> | undefined;
168
+ } & {
169
+ readonly features: import("@jbrowse/core/util/compositeMap").default<string, import("@jbrowse/core/util").Feature>;
170
+ readonly featureUnderMouse: import("@jbrowse/core/util").Feature | undefined;
171
+ getFeatureOverlapping(blockKey: string, x: number, y: number): any;
172
+ getFeatureByID(blockKey: string, id: string): [number, number, number, number] | undefined;
173
+ searchFeatureByID(id: string): [number, number, number, number] | undefined;
174
+ readonly currentBytesRequested: number;
175
+ readonly currentFeatureScreenDensity: number;
176
+ readonly maxFeatureScreenDensity: any;
177
+ readonly estimatedStatsReady: boolean;
178
+ readonly maxAllowableBytes: number;
179
+ } & {
180
+ setMessage(message: string): void;
181
+ afterAttach(): void;
182
+ estimateRegionsStats(regions: import("@jbrowse/core/util").Region[], opts: {
183
+ headers?: Record<string, string> | undefined;
184
+ signal?: AbortSignal | undefined;
185
+ filters?: string[] | undefined;
186
+ }): Promise<{}>;
187
+ setRegionStatsP(p?: Promise<import("@jbrowse/core/data_adapters/BaseAdapter").Stats> | undefined): void;
188
+ setRegionStats(estimatedRegionStats?: import("@jbrowse/core/data_adapters/BaseAdapter").Stats | undefined): void;
189
+ clearRegionStats(): void;
190
+ setHeight(displayHeight: number): number;
191
+ resizeHeight(distance: number): number;
192
+ setScrollTop(scrollTop: number): void;
193
+ updateStatsLimit(stats: import("@jbrowse/core/data_adapters/BaseAdapter").Stats): void;
194
+ addBlock(key: string, block: import("@jbrowse/core/util/blockTypes").BaseBlock): void;
195
+ setCurrBpPerPx(n: number): void;
196
+ deleteBlock(key: string): void;
197
+ selectFeature(feature: import("@jbrowse/core/util").Feature): void;
198
+ clearFeatureSelection(): void;
199
+ setFeatureIdUnderMouse(feature: string | undefined): void;
200
+ reload(): void;
201
+ setContextMenuFeature(feature?: import("@jbrowse/core/util").Feature | undefined): void;
202
+ } & {
203
+ readonly regionTooLarge: boolean;
204
+ readonly regionTooLargeReason: string;
205
+ } & {
206
+ reload(): Promise<void>;
207
+ afterAttach(): void;
208
+ } & {
209
+ regionCannotBeRenderedText(_region: import("@jbrowse/core/util").Region): "" | "Force load to see features";
210
+ regionCannotBeRendered(_region: import("@jbrowse/core/util").Region): JSX.Element | null;
211
+ trackMenuItems(): import("@jbrowse/core/ui").MenuItem[];
212
+ contextMenuItems(): {
213
+ label: string;
214
+ icon: import("@mui/material/OverridableComponent").OverridableComponent<import("@mui/material").SvgIconTypeMap<{}, "svg">> & {
215
+ muiName: string;
216
+ };
217
+ onClick: () => void;
218
+ }[];
219
+ renderProps(): any;
220
+ } & {
221
+ renderSvg(opts: ExportSvgOptions & {
222
+ overrideHeight: number;
223
+ }): Promise<JSX.Element>;
224
+ } & {
225
+ loading: boolean;
226
+ drawn: boolean;
227
+ chainData: ChainData | undefined;
228
+ ref: HTMLCanvasElement | null;
229
+ lastDrawnOffsetPx: number;
230
+ } & {
231
+ /**
232
+ * #action
233
+ * internal, a reference to a HTMLCanvas because we use a autorun to draw the canvas
234
+ */
235
+ reload(): void;
236
+ /**
237
+ * #action
238
+ * internal, a reference to a HTMLCanvas because we use a autorun to draw the canvas
239
+ */
240
+ setRef(ref: HTMLCanvasElement | null): void;
241
+ /**
242
+ * #action
243
+ */
244
+ setColorScheme(s: {
245
+ type: string;
246
+ }): void;
247
+ /**
248
+ * #action
249
+ */
250
+ setChainData(args: ChainData): void;
251
+ /**
252
+ * #action
253
+ */
254
+ setDrawInter(f: boolean): void;
255
+ /**
256
+ * #action
257
+ */
258
+ setDrawLongRange(f: boolean): void;
259
+ /**
260
+ * #action
261
+ */
262
+ setLoading(f: boolean): void;
263
+ /**
264
+ * #action
265
+ * used during tests to detect when we can complete a snapshot test
266
+ */
267
+ setDrawn(f: boolean): void;
268
+ /**
269
+ * #action
270
+ */
271
+ setFilterBy(filter: Filter): void;
272
+ /**
273
+ * #action
274
+ * allows the drawing to slide around a little bit if it takes a long time to refresh
275
+ */
276
+ setLastDrawnOffsetPx(n: number): void;
277
+ /**
278
+ * #action
279
+ * thin, bold, extrabold, etc
280
+ */
281
+ setLineWidth(n: number): void;
282
+ } & {
283
+ /**
284
+ * #getter
285
+ */
286
+ readonly lineWidthSetting: any;
287
+ /**
288
+ * #getter
289
+ */
290
+ readonly ready: boolean;
291
+ readonly rendererTypeName: string;
292
+ renderProps(): any;
293
+ /**
294
+ * #method
295
+ */
296
+ trackMenuItems(): (import("@jbrowse/core/ui").MenuDivider | import("@jbrowse/core/ui").MenuSubHeader | import("@jbrowse/core/ui").NormalMenuItem | import("@jbrowse/core/ui").CheckboxMenuItem | import("@jbrowse/core/ui").RadioMenuItem | import("@jbrowse/core/ui").SubMenuItem | {
297
+ label: string;
298
+ icon: import("@mui/material/OverridableComponent").OverridableComponent<import("@mui/material").SvgIconTypeMap<{}, "svg">> & {
299
+ muiName: string;
300
+ };
301
+ onClick: () => void;
302
+ type?: undefined;
303
+ checked?: undefined;
304
+ subMenu?: undefined;
305
+ } | {
306
+ label: string;
307
+ type: string;
308
+ checked: boolean;
309
+ onClick: () => void;
310
+ icon?: undefined;
311
+ subMenu?: undefined;
312
+ } | {
313
+ label: string;
314
+ icon: import("@mui/material/OverridableComponent").OverridableComponent<import("@mui/material").SvgIconTypeMap<{}, "svg">> & {
315
+ muiName: string;
316
+ };
317
+ subMenu: {
318
+ label: string;
319
+ onClick: () => void;
320
+ }[];
321
+ onClick?: undefined;
322
+ type?: undefined;
323
+ checked?: undefined;
324
+ })[];
325
+ } & {
326
+ /**
327
+ * #method
328
+ */
329
+ renderSvg(opts: ExportSvgOptions): Promise<JSX.Element | undefined>;
330
+ } & {
331
+ afterAttach(): void;
332
+ }, import("mobx-state-tree")._NotCustomized, {
333
+ type: string;
334
+ height: number;
335
+ id: string;
336
+ rpcDriverName: string | undefined;
337
+ userBpPerPxLimit: number | undefined;
338
+ userByteSizeLimit: number | undefined;
339
+ } & import("mobx-state-tree")._NotCustomized>;
340
+ export type LinearReadArcsDisplayStateModel = ReturnType<typeof stateModelFactory>;
341
+ export type LinearReadArcsDisplayModel = Instance<LinearReadArcsDisplayStateModel>;
342
+ export default stateModelFactory;
@@ -0,0 +1,299 @@
1
+ import React, { lazy } from 'react';
2
+ import { autorun } from 'mobx';
3
+ import { addDisposer, cast, types } from 'mobx-state-tree';
4
+ import { ConfigurationReference, ConfigurationSchema, getConf, } from '@jbrowse/core/configuration';
5
+ import { getSession, getContainingView } from '@jbrowse/core/util';
6
+ import { BaseLinearDisplay, } from '@jbrowse/plugin-linear-genome-view';
7
+ // icons
8
+ import PaletteIcon from '@mui/icons-material/Palette';
9
+ import FilterListIcon from '@mui/icons-material/ClearAll';
10
+ // locals
11
+ import { FilterModel } from '../shared';
12
+ import drawFeats from './drawFeats';
13
+ import { fetchChains } from '../shared/fetchChains';
14
+ // async
15
+ const FilterByTagDlg = lazy(() => import('../shared/FilterByTag'));
16
+ /**
17
+ * #stateModel LinearReadArcsDisplay
18
+ * extends `BaseLinearDisplay`
19
+ */
20
+ function stateModelFactory(configSchema) {
21
+ return types
22
+ .compose('LinearReadArcsDisplay', BaseLinearDisplay, types.model({
23
+ /**
24
+ * #property
25
+ */
26
+ type: types.literal('LinearReadArcsDisplay'),
27
+ /**
28
+ * #property
29
+ */
30
+ configuration: ConfigurationReference(configSchema),
31
+ /**
32
+ * #property
33
+ */
34
+ filterBy: types.optional(FilterModel, {}),
35
+ /**
36
+ * #property
37
+ */
38
+ lineWidth: types.maybe(types.number),
39
+ /**
40
+ * #property
41
+ */
42
+ colorBy: types.maybe(types.model({
43
+ type: types.string,
44
+ tag: types.maybe(types.string),
45
+ extra: types.frozen(),
46
+ })),
47
+ /**
48
+ * #property
49
+ */
50
+ drawInter: true,
51
+ /**
52
+ * #property
53
+ */
54
+ drawLongRange: true,
55
+ }))
56
+ .volatile(() => ({
57
+ loading: false,
58
+ drawn: false,
59
+ chainData: undefined,
60
+ ref: null,
61
+ lastDrawnOffsetPx: 0,
62
+ }))
63
+ .actions(self => ({
64
+ /**
65
+ * #action
66
+ * internal, a reference to a HTMLCanvas because we use a autorun to draw the canvas
67
+ */
68
+ reload() {
69
+ self.error = undefined;
70
+ },
71
+ /**
72
+ * #action
73
+ * internal, a reference to a HTMLCanvas because we use a autorun to draw the canvas
74
+ */
75
+ setRef(ref) {
76
+ self.ref = ref;
77
+ },
78
+ /**
79
+ * #action
80
+ */
81
+ setColorScheme(s) {
82
+ self.colorBy = cast(s);
83
+ },
84
+ /**
85
+ * #action
86
+ */
87
+ setChainData(args) {
88
+ self.chainData = args;
89
+ },
90
+ /**
91
+ * #action
92
+ */
93
+ setDrawInter(f) {
94
+ self.drawInter = f;
95
+ },
96
+ /**
97
+ * #action
98
+ */
99
+ setDrawLongRange(f) {
100
+ self.drawLongRange = f;
101
+ },
102
+ /**
103
+ * #action
104
+ */
105
+ setLoading(f) {
106
+ self.loading = f;
107
+ },
108
+ /**
109
+ * #action
110
+ * used during tests to detect when we can complete a snapshot test
111
+ */
112
+ setDrawn(f) {
113
+ self.drawn = f;
114
+ },
115
+ /**
116
+ * #action
117
+ */
118
+ setFilterBy(filter) {
119
+ self.filterBy = cast(filter);
120
+ },
121
+ /**
122
+ * #action
123
+ * allows the drawing to slide around a little bit if it takes a long time to refresh
124
+ */
125
+ setLastDrawnOffsetPx(n) {
126
+ self.lastDrawnOffsetPx = n;
127
+ },
128
+ /**
129
+ * #action
130
+ * thin, bold, extrabold, etc
131
+ */
132
+ setLineWidth(n) {
133
+ self.lineWidth = n;
134
+ },
135
+ }))
136
+ .views(self => {
137
+ const { trackMenuItems: superTrackMenuItems, renderProps: superRenderProps, } = self;
138
+ return {
139
+ /**
140
+ * #getter
141
+ */
142
+ get lineWidthSetting() {
143
+ var _a;
144
+ return (_a = self.lineWidth) !== null && _a !== void 0 ? _a : getConf(self, 'lineWidth');
145
+ },
146
+ /**
147
+ * #getter
148
+ */
149
+ get ready() {
150
+ return !!self.chainData;
151
+ },
152
+ // we don't use a server side renderer, but we need to provide this
153
+ // to avoid confusing the system currently
154
+ get rendererTypeName() {
155
+ return 'PileupRenderer';
156
+ },
157
+ // we don't use a server side renderer, so this fills in minimal
158
+ // info so as not to crash
159
+ renderProps() {
160
+ return {
161
+ ...superRenderProps(),
162
+ // never ready, we don't want to use server side render
163
+ notReady: true,
164
+ config: ConfigurationSchema('empty', {}).create(),
165
+ };
166
+ },
167
+ /**
168
+ * #method
169
+ */
170
+ trackMenuItems() {
171
+ return [
172
+ ...superTrackMenuItems(),
173
+ {
174
+ label: 'Filter by',
175
+ icon: FilterListIcon,
176
+ onClick: () => {
177
+ getSession(self).queueDialog(handleClose => [
178
+ FilterByTagDlg,
179
+ { model: self, handleClose },
180
+ ]);
181
+ },
182
+ },
183
+ {
184
+ label: 'Line width',
185
+ subMenu: [
186
+ {
187
+ label: 'Thin',
188
+ onClick: () => self.setLineWidth(1),
189
+ },
190
+ {
191
+ label: 'Bold',
192
+ onClick: () => self.setLineWidth(2),
193
+ },
194
+ {
195
+ label: 'Extra bold',
196
+ onClick: () => self.setLineWidth(5),
197
+ },
198
+ ],
199
+ },
200
+ {
201
+ label: 'Draw inter-region vertical lines',
202
+ type: 'checkbox',
203
+ checked: self.drawInter,
204
+ onClick: () => self.setDrawInter(!self.drawInter),
205
+ },
206
+ {
207
+ label: 'Draw long range connections',
208
+ type: 'checkbox',
209
+ checked: self.drawLongRange,
210
+ onClick: () => self.setDrawLongRange(!self.drawLongRange),
211
+ },
212
+ {
213
+ label: 'Color scheme',
214
+ icon: PaletteIcon,
215
+ subMenu: [
216
+ {
217
+ label: 'Insert size ± 3σ and orientation',
218
+ onClick: () => self.setColorScheme({ type: 'insertSizeAndOrientation' }),
219
+ },
220
+ {
221
+ label: 'Insert size ± 3σ',
222
+ onClick: () => self.setColorScheme({ type: 'insertSize' }),
223
+ },
224
+ {
225
+ label: 'Orientation',
226
+ onClick: () => self.setColorScheme({ type: 'orientation' }),
227
+ },
228
+ {
229
+ label: 'Insert size gradient',
230
+ onClick: () => self.setColorScheme({ type: 'gradient' }),
231
+ },
232
+ ],
233
+ },
234
+ ];
235
+ },
236
+ };
237
+ })
238
+ .views(self => ({
239
+ /**
240
+ * #method
241
+ */
242
+ async renderSvg(opts) {
243
+ const view = getContainingView(self);
244
+ const width = view.dynamicBlocks.totalWidthPx;
245
+ const height = self.height;
246
+ let str;
247
+ if (opts.rasterizeLayers) {
248
+ const canvas = document.createElement('canvas');
249
+ canvas.width = width * 2;
250
+ canvas.height = height * 2;
251
+ const ctx = canvas.getContext('2d');
252
+ if (!ctx) {
253
+ return;
254
+ }
255
+ ctx.scale(2, 2);
256
+ await drawFeats(self, ctx);
257
+ str = (React.createElement("image", { width: width, height: height, xlinkHref: canvas.toDataURL('image/png') }));
258
+ }
259
+ else {
260
+ // @ts-ignore
261
+ const C2S = await import('canvas2svg');
262
+ const ctx = new C2S.default(width, height);
263
+ await drawFeats(self, ctx);
264
+ str = (
265
+ // eslint-disable-next-line react/no-danger
266
+ React.createElement("g", { dangerouslySetInnerHTML: { __html: ctx.getSvg().innerHTML } }));
267
+ }
268
+ return React.createElement("g", null, str);
269
+ },
270
+ }))
271
+ .actions(self => ({
272
+ afterAttach() {
273
+ addDisposer(self, autorun(() => fetchChains(self), { delay: 1000 }));
274
+ addDisposer(self, autorun(async () => {
275
+ try {
276
+ const canvas = self.ref;
277
+ if (!canvas) {
278
+ return;
279
+ }
280
+ const ctx = canvas.getContext('2d');
281
+ if (!ctx) {
282
+ return;
283
+ }
284
+ ctx.clearRect(0, 0, canvas.width, self.height * 2);
285
+ ctx.resetTransform();
286
+ ctx.scale(2, 2);
287
+ await drawFeats(self, ctx);
288
+ self.setDrawn(true);
289
+ }
290
+ catch (e) {
291
+ console.error(e);
292
+ self.setError(e);
293
+ }
294
+ }, { delay: 1000 }));
295
+ },
296
+ }));
297
+ }
298
+ export default stateModelFactory;
299
+ //# sourceMappingURL=model.js.map
@@ -0,0 +1 @@
1
+ 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@@ -0,0 +1,6 @@
1
+ /// <reference types="react" />
2
+ import { LinearReadCloudDisplayModel } from '../model';
3
+ declare const _default: ({ model, }: {
4
+ model: LinearReadCloudDisplayModel;
5
+ }) => JSX.Element;
6
+ export default _default;