@jbrowse/plugin-alignments 2.15.3 → 2.16.0

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Files changed (5) hide show
  1. package/dist/MismatchParser/index.d.ts +1 -0
  2. package/dist/PileupRenderer/renderMismatches.js +1 -1
  3. package/esm/MismatchParser/index.d.ts +1 -0
  4. package/esm/PileupRenderer/renderMismatches.js +1 -1
  5. package/package.json +3 -3
package/dist/MismatchParser/index.d.ts CHANGED
@@ -1,4 +1,5 @@
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  import { Feature } from '@jbrowse/core/util';
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+ import type { Buffer } from 'buffer';
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  export interface Mismatch {
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  qual?: number;
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  start: number;
package/dist/PileupRenderer/renderMismatches.js CHANGED
@@ -97,7 +97,7 @@ function renderMismatches({ ctx, feat, renderArgs, minSubfeatureWidth, largeInse
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  // make small exons more visible when zoomed far out
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  const adjustPx = widthPx - (bpPerPx > 10 ? 1.5 : 0);
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  ctx.clearRect(leftPx, topPx, adjustPx, heightPx);
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- (0, util_2.fillRect)(ctx, Math.max(0, leftPx), topPx + heightPx / 2 - 1, adjustPx + (leftPx < 0 ? leftPx : 0), 2, canvasWidth, '#333');
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+ (0, util_2.fillRect)(ctx, Math.max(0, leftPx), topPx + heightPx / 2 - 1, adjustPx + Math.min(leftPx, 0), 2, canvasWidth, '#333');
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  }
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  }
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  }
package/esm/MismatchParser/index.d.ts CHANGED
@@ -1,4 +1,5 @@
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  import { Feature } from '@jbrowse/core/util';
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+ import type { Buffer } from 'buffer';
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  export interface Mismatch {
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  qual?: number;
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  start: number;
package/esm/PileupRenderer/renderMismatches.js CHANGED
@@ -94,7 +94,7 @@ export function renderMismatches({ ctx, feat, renderArgs, minSubfeatureWidth, la
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  // make small exons more visible when zoomed far out
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  const adjustPx = widthPx - (bpPerPx > 10 ? 1.5 : 0);
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  ctx.clearRect(leftPx, topPx, adjustPx, heightPx);
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- fillRect(ctx, Math.max(0, leftPx), topPx + heightPx / 2 - 1, adjustPx + (leftPx < 0 ? leftPx : 0), 2, canvasWidth, '#333');
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+ fillRect(ctx, Math.max(0, leftPx), topPx + heightPx / 2 - 1, adjustPx + Math.min(leftPx, 0), 2, canvasWidth, '#333');
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  }
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  }
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  }
package/package.json CHANGED
@@ -1,6 +1,6 @@
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  {
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  "name": "@jbrowse/plugin-alignments",
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- "version": "2.15.3",
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+ "version": "2.16.0",
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  "description": "JBrowse 2 alignments adapters, tracks, etc.",
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  "keywords": [
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  "jbrowse",
@@ -38,7 +38,7 @@
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  "dependencies": {
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  "@gmod/bam": "^2.0.0",
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  "@gmod/cram": "^3.0.3",
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- "@jbrowse/sv-core": "^2.15.3",
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+ "@jbrowse/sv-core": "^2.16.0",
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  "@mui/icons-material": "^6.0.0",
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  "canvas2svg": "^1.0.16",
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  "clone": "^2.1.2",
@@ -64,5 +64,5 @@
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  "distModule": "esm/index.js",
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  "srcModule": "src/index.ts",
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  "module": "esm/index.js",
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- "gitHead": "c0f82fe7b210622dd462e702641cc6da01109c6e"
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+ "gitHead": "1e6d4fbc27ce684eed19e3c217f34bd2da24ab75"
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  }