@jbrowse/plugin-alignments 2.0.0 → 2.1.2

package/dist/BamAdapter/MismatchParser.js.map

@@ -1 +1 @@
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package/dist/BamAdapter/configSchema.js

@@ -1,35 +1,33 @@
 "use strict";
 Object.defineProperty(exports, "__esModule", { value: true });
-var configuration_1 = require("@jbrowse/core/configuration");
-var mobx_state_tree_1 = require("mobx-state-tree");
-exports.default = mobx_state_tree_1.types.late(function () {
-    return (0, configuration_1.ConfigurationSchema)('BamAdapter', {
-        bamLocation: {
-            type: 'fileLocation',
-            defaultValue: { uri: '/path/to/my.bam', locationType: 'UriLocation' },
+const configuration_1 = require("@jbrowse/core/configuration");
+const mobx_state_tree_1 = require("mobx-state-tree");
+exports.default = mobx_state_tree_1.types.late(() => (0, configuration_1.ConfigurationSchema)('BamAdapter', {
+    bamLocation: {
+        type: 'fileLocation',
+        defaultValue: { uri: '/path/to/my.bam', locationType: 'UriLocation' },
+    },
+    index: (0, configuration_1.ConfigurationSchema)('BamIndex', {
+        indexType: {
+            model: mobx_state_tree_1.types.enumeration('IndexType', ['BAI', 'CSI']),
+            type: 'stringEnum',
+            defaultValue: 'BAI',
         },
-        index: (0, configuration_1.ConfigurationSchema)('BamIndex', {
-            indexType: {
-                model: mobx_state_tree_1.types.enumeration('IndexType', ['BAI', 'CSI']),
-                type: 'stringEnum',
-                defaultValue: 'BAI',
-            },
-            location: {
-                type: 'fileLocation',
-                defaultValue: {
-                    uri: '/path/to/my.bam.bai',
-                    locationType: 'UriLocation',
-                },
+        location: {
+            type: 'fileLocation',
+            defaultValue: {
+                uri: '/path/to/my.bam.bai',
+                locationType: 'UriLocation',
             },
-        }),
-        fetchSizeLimit: {
-            type: 'number',
-            defaultValue: 5000000,
-        },
-        sequenceAdapter: {
-            type: 'frozen',
-            defaultValue: null,
         },
-    }, { explicitlyTyped: true });
-});
+    }),
+    fetchSizeLimit: {
+        type: 'number',
+        defaultValue: 5000000,
+    },
+    sequenceAdapter: {
+        type: 'frozen',
+        defaultValue: null,
+    },
+}, { explicitlyTyped: true }));
 //# sourceMappingURL=configSchema.js.map

package/dist/BamAdapter/configSchema.js.map

@@ -1 +1 @@
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+{"version":3,"file":"configSchema.js","sourceRoot":"","sources":["../../src/BamAdapter/configSchema.ts"],"names":[],"mappings":";;AAAA,+DAAiE;AACjE,qDAAuC;AAEvC,kBAAe,uBAAK,CAAC,IAAI,CAAC,GAAG,EAAE,CAC7B,IAAA,mCAAmB,EACjB,YAAY,EACZ;IACE,WAAW,EAAE;QACX,IAAI,EAAE,cAAc;QACpB,YAAY,EAAE,EAAE,GAAG,EAAE,iBAAiB,EAAE,YAAY,EAAE,aAAa,EAAE;KACtE;IACD,KAAK,EAAE,IAAA,mCAAmB,EAAC,UAAU,EAAE;QACrC,SAAS,EAAE;YACT,KAAK,EAAE,uBAAK,CAAC,WAAW,CAAC,WAAW,EAAE,CAAC,KAAK,EAAE,KAAK,CAAC,CAAC;YACrD,IAAI,EAAE,YAAY;YAClB,YAAY,EAAE,KAAK;SACpB;QACD,QAAQ,EAAE;YACR,IAAI,EAAE,cAAc;YACpB,YAAY,EAAE;gBACZ,GAAG,EAAE,qBAAqB;gBAC1B,YAAY,EAAE,aAAa;aAC5B;SACF;KACF,CAAC;IACF,cAAc,EAAE;QACd,IAAI,EAAE,QAAQ;QACd,YAAY,EAAE,OAAS;KACxB;IACD,eAAe,EAAE;QACf,IAAI,EAAE,QAAQ;QACd,YAAY,EAAE,IAAI;KACnB;CACF,EACD,EAAE,eAAe,EAAE,IAAI,EAAE,CAC1B,CACF,CAAA"}

package/dist/BamAdapter/index.js

@@ -26,15 +26,13 @@ var __importDefault = (this && this.__importDefault) || function (mod) {
     return (mod && mod.__esModule) ? mod : { "default": mod };
 };
 Object.defineProperty(exports, "__esModule", { value: true });
-var AdapterType_1 = __importDefault(require("@jbrowse/core/pluggableElementTypes/AdapterType"));
-var configSchema_1 = __importDefault(require("./configSchema"));
-exports.default = (function (pluginManager) {
-    pluginManager.addAdapterType(function () {
-        return new AdapterType_1.default({
-            name: 'BamAdapter',
-            configSchema: configSchema_1.default,
-            getAdapterClass: function () { return Promise.resolve().then(function () { return __importStar(require('./BamAdapter')); }).then(function (r) { return r.default; }); },
-        });
-    });
-});
+const AdapterType_1 = __importDefault(require("@jbrowse/core/pluggableElementTypes/AdapterType"));
+const configSchema_1 = __importDefault(require("./configSchema"));
+exports.default = (pluginManager) => {
+    pluginManager.addAdapterType(() => new AdapterType_1.default({
+        name: 'BamAdapter',
+        configSchema: configSchema_1.default,
+        getAdapterClass: () => Promise.resolve().then(() => __importStar(require('./BamAdapter'))).then(r => r.default),
+    }));
+};
 //# sourceMappingURL=index.js.map

package/dist/BamAdapter/index.js.map

@@ -1 +1 @@
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