@jbrowse/plugin-alignments 1.5.2 → 1.5.6
This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
- package/dist/BamAdapter/BamSlightlyLazyFeature.d.ts +1 -1
- package/dist/plugin-alignments.cjs.development.js +26 -30
- package/dist/plugin-alignments.cjs.development.js.map +1 -1
- package/dist/plugin-alignments.cjs.production.min.js +1 -1
- package/dist/plugin-alignments.cjs.production.min.js.map +1 -1
- package/dist/plugin-alignments.esm.js +26 -30
- package/dist/plugin-alignments.esm.js.map +1 -1
- package/package.json +2 -2
- package/src/AlignmentsFeatureDetail/__snapshots__/index.test.js.snap +8 -0
- package/src/BamAdapter/BamSlightlyLazyFeature.ts +5 -11
- package/src/CramAdapter/CramSlightlyLazyFeature.ts +1 -5
- package/src/PileupRenderer/components/PileupRendering.tsx +2 -0
package/package.json
CHANGED
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@@ -1,6 +1,6 @@
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{
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"name": "@jbrowse/plugin-alignments",
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"version": "1.5.
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"version": "1.5.6",
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"description": "JBrowse 2 alignments adapters, tracks, etc.",
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"keywords": [
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"jbrowse",
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@@ -61,5 +61,5 @@
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"publishConfig": {
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"access": "public"
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},
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"gitHead": "
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"gitHead": "f3d36cfd90f7c5bdf86869d6698d8cb68a8e122f"
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}
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@@ -147,6 +147,7 @@ exports[`open up a widget 1`] = `
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>
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<div
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class="makeStyles-fieldName"
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style="width: 96px;"
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>
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seq
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</div>
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<div
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class="makeStyles-fieldName"
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style="width: 96px;"
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score
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</div>
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<div
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class="makeStyles-fieldName"
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style="width: 96px;"
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qual
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</div>
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@@ -205,6 +208,7 @@ exports[`open up a widget 1`] = `
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<div
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class="makeStyles-fieldName"
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style="width: 96px;"
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</div>
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<div
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class="makeStyles-fieldName"
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style="width: 96px;"
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>
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CIGAR
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</div>
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<div
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class="makeStyles-fieldName"
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style="width: 96px;"
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>
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length_on_ref
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</div>
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>
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<div
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class="makeStyles-fieldName"
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style="width: 96px;"
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>
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template_length
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</div>
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>
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<div
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class="makeStyles-fieldName"
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style="width: 96px;"
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>
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seq_length
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</div>
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@@ -15,17 +15,11 @@ import {
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import BamAdapter from './BamAdapter'
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export default class BamSlightlyLazyFeature implements Feature {
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constructor(record: BamRecord, adapter: BamAdapter, ref?: string) {
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this.record = record
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this.adapter = adapter
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this.ref = ref
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}
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constructor(
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private record: BamRecord,
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private adapter: BamAdapter,
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private ref?: string,
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) {}
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_get_name() {
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return this.record.get('name')
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}
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export default class CramSlightlyLazyFeature implements Feature {
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// eslint-disable-next-line @typescript-eslint/no-explicit-any
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private record: any
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private _store: CramAdapter
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// eslint-disable-next-line @typescript-eslint/no-explicit-any
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constructor(record: any, store: CramAdapter) {
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this.record = record
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constructor(private record: any, store: CramAdapter) {
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this._store = store
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}
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@@ -158,8 +158,10 @@ function PileupRendering(props: {
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function callMouseHandler(handlerName: string, event: MouseEvent) {
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// @ts-ignore
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// eslint-disable-next-line react/destructuring-assignment
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const featureHandler = props[`onFeature${handlerName}`]
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// @ts-ignore
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// eslint-disable-next-line react/destructuring-assignment
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const canvasHandler = props[`on${handlerName}`]
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if (featureHandler && featureIdUnderMouse) {
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featureHandler(event, featureIdUnderMouse)
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