@jbrowse/launch-args 5.0.0-beta.18 → 5.0.0-beta.19

package/esm/displaySettings.js

@@ -280,7 +280,7 @@ function parseFlagMask(prefix, val) {
         })
             .reduce((a, b) => a | b, 0);
 }
-// The feature display and the variant display share LinearCanvasBaseDisplay's
+// The feature display and the variant display share LinearFeatureBaseDisplay's
 // schema, so a modifier reading one of its slots takes both.
 const CANVAS = ['feature', 'variant'];
 function settingsOf(result) {
@@ -356,7 +356,7 @@ const modifiers = {
             }
         },
     },
-    // alignments write `pileup.mark.height`, the canvas displays `displayMode`
+    // alignments write `pileup.mark.height`, the feature displays `displayMode`
     // or `mark.height`
     featureHeight: {
         on: ['alignments', ...CANVAS],
@@ -486,7 +486,7 @@ const modifiers = {
             });
         },
     },
-    // a constant, a read field on alignments, or `strand` on a canvas display;
+    // a constant, a read field on alignments, or `strand` on a feature display;
     // any other field is `encoding.color.field=tags.HP`
     color: {
         on: ALL_CATEGORIES,

package/esm/displaySlots.generated.js

@@ -18,6 +18,6 @@ export const displaySlotPaths = {
     LinearReferenceSequenceDisplay: ["displayId", "fetchSizeLimit", "forceLoad", "forward", "forward.show", "height", "renderer", "reverse", "reverse.show", "translation", "translation.show", "type"],
     LinearSyntenyDisplay: ["displayId", "middle", "renderer", "type"],
     LinearVariantDisplay: ["color1", "color2", "color3", "containerTypes", "displayId", "displayMode", "encoding", "encoding.color", "encoding.color.field", "encoding.color.legend", "encoding.color.scale", "encoding.color.value", "facet", "facet.field", "facet.hidden", "facet.sort", "featureHeight", "fetchSizeLimit", "filter", "filter.equal", "filter.field", "filter.gt", "filter.gte", "filter.lt", "filter.lte", "filter.oneOf", "filter.range", "filter.valid", "forceLoad", "growMaxHeight", "height", "heightMode", "impliedUTRs", "jexlFilters", "labels", "labels.description", "labels.description.field", "labels.description.show", "labels.name", "labels.name.field", "labels.name.show", "legend", "legend.show", "mark", "mark.height", "maxDisplayedBpPerPx", "maxFeatureScreenDensity", "maxHeight", "mouseover", "outline", "renderer", "showDescriptions", "showLabels", "subfeatureLabels", "tooltip", "tooltip.field", "tooltip.show", "transcriptTypes", "type"],
-    LinearWiggleDisplay: ["autoscale", "axis", "axis.branchLength", "axis.grid", "axis.labels", "axis.tree", "axis.width", "data", "data.resolution", "defaultRendering", "displayCrossHatches", "displayId", "encoding", "encoding.color", "encoding.color.field", "encoding.color.legend", "encoding.color.scale", "encoding.color.value", "encoding.size", "encoding.size.value", "encoding.strokeWidth", "encoding.strokeWidth.value", "encoding.y", "encoding.y.axis", "encoding.y.field", "encoding.y.rules", "encoding.y.scale", "extent", "fetchSizeLimit", "height", "inverted", "jexlFilters", "legend", "legend.show", "mark", "mark.extent", "mark.interpolate", "mark.type", "maxDisplayedBpPerPx", "maxFeatureScreenDensity", "maxScore", "minScore", "minimalTicks", "mouseover", "numStdDev", "origin", "renderers", "rowColor", "rowColor.field", "rowColor.scale", "rowColor.scale.domain", "rowColor.scale.range", "rowColor.scale.unknown", "rows", "rows.field", "rows.kept", "rows.labels", "rows.sort", "rows.tree", "rows.treeProvenance", "scaleType", "type"],
+    LinearWiggleDisplay: ["autoscale", "axis", "axis.branchLength", "axis.grid", "axis.labels", "axis.tree", "axis.width", "data", "data.resolution", "defaultRendering", "displayCrossHatches", "displayId", "encoding", "encoding.color", "encoding.color.field", "encoding.color.legend", "encoding.color.scale", "encoding.color.value", "encoding.size", "encoding.size.value", "encoding.strokeWidth", "encoding.strokeWidth.value", "encoding.y", "encoding.y.axis", "encoding.y.field", "encoding.y.rules", "encoding.y.scale", "fetchSizeLimit", "height", "inverted", "jexlFilters", "legend", "legend.show", "mark", "mark.extent", "mark.interpolate", "mark.type", "maxDisplayedBpPerPx", "maxFeatureScreenDensity", "maxScore", "minScore", "minimalTicks", "mouseover", "numStdDev", "origin", "renderers", "rowColor", "rowColor.field", "rowColor.scale", "rowColor.scale.domain", "rowColor.scale.range", "rowColor.scale.unknown", "rows", "rows.field", "rows.kept", "rows.labels", "rows.sort", "rows.tree", "rows.treeProvenance", "scaleType", "type"],
     MultiWaySyntenyDisplay: ["axis", "axis.show", "data", "data.resolution", "displayId", "encoding", "encoding.color", "encoding.color.field", "encoding.color.legend", "encoding.color.scale", "encoding.color.value", "fetchSizeLimit", "forceLoad", "height", "jexlFilters", "labels", "labels.lanes", "labels.lanes.placement", "labels.name", "labels.name.field", "labels.name.show", "laneGeneTracks", "laneLayers", "laneLayers.adapter", "laneLayers.adapter.baseUri", "laneLayers.adapter.type", "laneLayers.adapter.uri", "laneLayers.height", "laneLayers.marks", "laneLayers.marks.encoding", "laneLayers.marks.mark", "laneLayers.marks.maxBpPerPx", "laneLayers.marks.minBpPerPx", "laneLayers.marks.transform", "laneLayers.name", "laneLayers.tracks", "legend", "legend.show", "maxDisplayedBpPerPx", "maxFeatureScreenDensity", "mouseover", "ribbons", "ribbons.encoding", "ribbons.encoding.color", "ribbons.encoding.opacity", "ribbons.filter", "ribbons.filter.equal", "ribbons.filter.field", "ribbons.filter.gt", "ribbons.filter.gte", "ribbons.filter.lt", "ribbons.filter.lte", "ribbons.filter.oneOf", "ribbons.filter.range", "ribbons.filter.valid", "ribbons.mark", "ribbons.mark.interpolate", "rows", "rows.field", "rows.kept", "rows.labels", "rows.sort", "rows.tree", "rows.treeProvenance", "type", "utrs", "utrs.encoding", "utrs.encoding.color"],
 };

package/package.json

@@ -1,6 +1,6 @@
 {
   "name": "@jbrowse/launch-args",
-  "version": "5.0.0-beta.18",
+  "version": "5.0.0-beta.19",
   "type": "module",
   "description": "The command-line grammar jbrowse-img, jb2capture and JBrowse Desktop share: data files, a genome, a location and tracks, turned into JBrowse config",
   "keywords": [
@@ -29,11 +29,11 @@
     "esm"
   ],
   "dependencies": {
-    "@jbrowse/add-track-core": "^5.0.0-beta.18",
-    "@jbrowse/cigar-utils": "^5.0.0-beta.18"
+    "@jbrowse/add-track-core": "^5.0.0-beta.19",
+    "@jbrowse/cigar-utils": "^5.0.0-beta.19"
   },
   "devDependencies": {
-    "@jbrowse/core": "^5.0.0-beta.18"
+    "@jbrowse/core": "^5.0.0-beta.19"
   },
   "publishConfig": {
     "access": "public"