@jbrowse/core 3.6.2 → 3.6.4

package/assemblyManager/assemblyManager.d.ts

@@ -207,6 +207,7 @@ declare function assemblyManagerFactory(conf: IAnyType, pm: PluginManager): impo
         afterCreate(): void;
     }, import("mobx-state-tree")._NotCustomized, import("mobx-state-tree")._NotCustomized>>>;
 } & {
+    getCanonicalAssemblyName(asmName: string): string | undefined;
     get(asmName: string): ({
         configuration: any;
     } & import("mobx-state-tree/dist/internal").NonEmptyObject & {

package/assemblyManager/assemblyManager.js

@@ -25,8 +25,24 @@ function assemblyManagerFactory(conf, pm) {
         },
     }))
         .views(self => ({
+        getCanonicalAssemblyName(asmName) {
+            var _a;
+            return (_a = self.assemblyNameMap[asmName]) === null || _a === void 0 ? void 0 : _a.name;
+        },
         get(asmName) {
-            return self.assemblyNameMap[asmName];
+            if (asmName) {
+                const assembly = self.assemblyNameMap[asmName];
+                if (assembly) {
+                    return assembly;
+                }
+                else if (!this.assemblyNamesList.includes(asmName)) {
+                    pm.evaluateExtensionPoint('Core-handleUnrecognizedAssembly', undefined, {
+                        assemblyName: asmName,
+                        session: (0, mobx_state_tree_1.getParent)(self).session,
+                    });
+                }
+            }
+            return undefined;
         },
         get assemblyNamesList() {
             return this.assemblyList.map(asm => asm.name);
@@ -51,7 +67,9 @@ function assemblyManagerFactory(conf, pm) {
             let assembly = self.get(assemblyName);
             if (!assembly) {
                 try {
-                    await (0, util_1.when)(() => Boolean(self.get(assemblyName)), { timeout: 1000 });
+                    await (0, util_1.when)(() => Boolean(self.get(assemblyName)), {
+                        timeout: 10000,
+                    });
                     assembly = self.get(assemblyName);
                 }
                 catch (e) {

package/package.json

@@ -1,6 +1,6 @@
 {
   "name": "@jbrowse/core",
-  "version": "3.6.2",
+  "version": "3.6.4",
   "description": "JBrowse 2 core libraries used by plugins",
   "keywords": [
     "jbrowse",
@@ -69,5 +69,5 @@
     "access": "public",
     "directory": "dist"
   },
-  "gitHead": "2a2c52face5f1b8fe899f48d5903e5c5f06dba63"
+  "gitHead": "3db8e50ce2bd9c081efbf6c2e7ae5f342380a25a"
 }