@jbrowse/core 2.4.2 → 2.6.0

package/rpc/coreRpcMethods.d.ts

@@ -5,5 +5,5 @@ export { default as CoreGetFileInfo } from './methods/CoreGetFileInfo';
 export { default as CoreGetFeatures } from './methods/CoreGetFeatures';
 export { default as CoreRender } from './methods/CoreRender';
 export { default as CoreFreeResources } from './methods/CoreFreeResources';
+export { default as CoreGetFeatureDensityStats } from './methods/CoreGetFeatureDensityStats';
 export { type RenderArgs } from './methods/util';
-export { default as CoreEstimateRegionStats } from './methods/CoreEstimateRegionStats';

package/rpc/coreRpcMethods.js

@@ -3,7 +3,7 @@ var __importDefault = (this && this.__importDefault) || function (mod) {
     return (mod && mod.__esModule) ? mod : { "default": mod };
 };
 Object.defineProperty(exports, "__esModule", { value: true });
-exports.CoreEstimateRegionStats = exports.CoreFreeResources = exports.CoreRender = exports.CoreGetFeatures = exports.CoreGetFileInfo = exports.CoreGetMetadata = exports.CoreGetFeatureDetails = exports.CoreGetRefNames = void 0;
+exports.CoreGetFeatureDensityStats = exports.CoreFreeResources = exports.CoreRender = exports.CoreGetFeatures = exports.CoreGetFileInfo = exports.CoreGetMetadata = exports.CoreGetFeatureDetails = exports.CoreGetRefNames = void 0;
 var CoreGetRefNames_1 = require("./methods/CoreGetRefNames");
 Object.defineProperty(exports, "CoreGetRefNames", { enumerable: true, get: function () { return __importDefault(CoreGetRefNames_1).default; } });
 var CoreGetFeatureDetails_1 = require("./methods/CoreGetFeatureDetails");
@@ -18,5 +18,5 @@ var CoreRender_1 = require("./methods/CoreRender");
 Object.defineProperty(exports, "CoreRender", { enumerable: true, get: function () { return __importDefault(CoreRender_1).default; } });
 var CoreFreeResources_1 = require("./methods/CoreFreeResources");
 Object.defineProperty(exports, "CoreFreeResources", { enumerable: true, get: function () { return __importDefault(CoreFreeResources_1).default; } });
-var CoreEstimateRegionStats_1 = require("./methods/CoreEstimateRegionStats");
-Object.defineProperty(exports, "CoreEstimateRegionStats", { enumerable: true, get: function () { return __importDefault(CoreEstimateRegionStats_1).default; } });
+var CoreGetFeatureDensityStats_1 = require("./methods/CoreGetFeatureDensityStats");
+Object.defineProperty(exports, "CoreGetFeatureDensityStats", { enumerable: true, get: function () { return __importDefault(CoreGetFeatureDensityStats_1).default; } });

package/rpc/mainThreadRpcConfig.d.ts

@@ -1,2 +1,8 @@
-declare const MainThreadRpcDriverConfigSchema: import("../configuration").AnyConfigurationSchemaType;
+declare const MainThreadRpcDriverConfigSchema: import("../configuration/configurationSchema").ConfigurationSchemaType<{}, import("../configuration/configurationSchema").ConfigurationSchemaOptions<import("../configuration/configurationSchema").ConfigurationSchemaType<{
+    workerCount: {
+        type: string;
+        description: string;
+        defaultValue: number;
+    };
+}, import("../configuration/configurationSchema").ConfigurationSchemaOptions<undefined, undefined>>, undefined>>;
 export default MainThreadRpcDriverConfigSchema;

package/rpc/methods/{CoreEstimateRegionStats.d.ts → CoreGetFeatureDensityStats.d.ts}

@@ -2,7 +2,7 @@ import RpcMethodType from '../../pluggableElementTypes/RpcMethodType';
 import { RenderArgs } from './util';
 import { RemoteAbortSignal } from '../remoteAbortSignals';
 import { Region } from '../../util';
-export default class CoreEstimateRegionStats extends RpcMethodType {
+export default class CoreGetFeatureDensityStats extends RpcMethodType {
     name: string;
     serializeArguments(args: RenderArgs & {
         signal?: AbortSignal;
@@ -14,5 +14,5 @@ export default class CoreEstimateRegionStats extends RpcMethodType {
         signal?: RemoteAbortSignal;
         headers?: Record<string, string>;
         sessionId: string;
-    }, rpcDriver: string): Promise<import("../../data_adapters/BaseAdapter").Stats>;
+    }, rpcDriver: string): Promise<import("../../data_adapters/BaseAdapter").FeatureDensityStats>;
 }

package/rpc/methods/{CoreEstimateRegionStats.js → CoreGetFeatureDensityStats.js}

@@ -8,10 +8,10 @@ const dataAdapterCache_1 = require("../../data_adapters/dataAdapterCache");
 const RpcMethodType_1 = __importDefault(require("../../pluggableElementTypes/RpcMethodType"));
 const BaseAdapter_1 = require("../../data_adapters/BaseAdapter");
 const util_1 = require("../../util");
-class CoreEstimateRegionStats extends RpcMethodType_1.default {
+class CoreGetFeatureDensityStats extends RpcMethodType_1.default {
     constructor() {
         super(...arguments);
-        this.name = 'CoreEstimateRegionStats';
+        this.name = 'CoreGetFeatureDensityStats';
     }
     async serializeArguments(args, rpcDriver) {
         var _a;
@@ -31,7 +31,7 @@ class CoreEstimateRegionStats extends RpcMethodType_1.default {
         if (!(0, BaseAdapter_1.isFeatureAdapter)(dataAdapter)) {
             throw new Error('Adapter does not support retrieving features');
         }
-        return dataAdapter.estimateRegionsStats(regions, deserializedArgs);
+        return dataAdapter.getMultiRegionFeatureDensityStats(regions, deserializedArgs);
     }
 }
-exports.default = CoreEstimateRegionStats;
+exports.default = CoreGetFeatureDensityStats;

package/rpc/methods/CoreGetFeatureDetails.js

@@ -28,17 +28,17 @@ class CoreGetFeatureDetails extends RpcMethodType_1.default {
         return RendererType.serializeArgsInClient(superArgs);
     }
     async execute(args, rpcDriver) {
+        var _a, _b;
         let deserializedArgs = args;
         if (rpcDriver !== 'MainThreadRpcDriver') {
             deserializedArgs = await this.deserializeArguments(args, rpcDriver);
         }
         const { rendererType, featureId } = deserializedArgs;
         const RendererType = (0, util_2.validateRendererType)(rendererType, this.pluginManager.getRendererType(rendererType));
-        // @ts-expect-error
-        const sess = RendererType.sessions[(0, util_1.getLayoutId)(args)];
-        const { layout } = sess.cachedLayout;
-        const xref = layout.getDataByID(featureId);
-        return { feature: xref.toJSON() };
+        return {
+            // @ts-expect-error
+            feature: (_b = (_a = RendererType.sessions[(0, util_1.getLayoutId)(args)]) === null || _a === void 0 ? void 0 : _a.cachedLayout.layout.getDataByID(featureId)) === null || _b === void 0 ? void 0 : _b.toJSON(),
+        };
     }
 }
 exports.default = CoreGetFeatureDetails;

package/rpc/webWorkerRpcConfig.d.ts

@@ -1,2 +1,8 @@
-declare const WebWorkerRpcDriverConfigSchema: import("../configuration").AnyConfigurationSchemaType;
+declare const WebWorkerRpcDriverConfigSchema: import("../configuration/configurationSchema").ConfigurationSchemaType<{}, import("../configuration/configurationSchema").ConfigurationSchemaOptions<import("../configuration/configurationSchema").ConfigurationSchemaType<{
+    workerCount: {
+        type: string;
+        description: string;
+        defaultValue: number;
+    };
+}, import("../configuration/configurationSchema").ConfigurationSchemaOptions<undefined, undefined>>, undefined>>;
 export default WebWorkerRpcDriverConfigSchema;