@jbrowse/core 2.1.4 → 2.1.6
This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
- package/BaseFeatureWidget/BaseFeatureDetail.d.ts +4 -3
- package/BaseFeatureWidget/BaseFeatureDetail.js +16 -17
- package/BaseFeatureWidget/SequenceBox.d.ts +29 -0
- package/BaseFeatureWidget/SequenceBox.js +61 -0
- package/BaseFeatureWidget/SequenceFeatureDetails.d.ts +2 -8
- package/BaseFeatureWidget/SequenceFeatureDetails.js +123 -135
- package/BaseFeatureWidget/SequenceFeatureSettingsDialog.d.ts +9 -0
- package/BaseFeatureWidget/SequenceFeatureSettingsDialog.js +71 -0
- package/BaseFeatureWidget/SequenceHelpDialog.d.ts +4 -0
- package/BaseFeatureWidget/SequenceHelpDialog.js +51 -0
- package/BaseFeatureWidget/SequencePanel.d.ts +10 -0
- package/BaseFeatureWidget/SequencePanel.js +72 -0
- package/BaseFeatureWidget/index.d.ts +7 -0
- package/BaseFeatureWidget/index.js +21 -5
- package/BaseFeatureWidget/test_data/DLGAP3.d.ts +80 -0
- package/BaseFeatureWidget/test_data/DLGAP3.js +585 -0
- package/BaseFeatureWidget/test_data/NCDN.d.ts +141 -0
- package/BaseFeatureWidget/test_data/NCDN.js +1118 -0
- package/BaseFeatureWidget/types.d.ts +2 -2
- package/BaseFeatureWidget/util.d.ts +13 -2
- package/BaseFeatureWidget/util.js +13 -1
- package/PluginLoader.d.ts +29 -13
- package/PluginLoader.js +47 -77
- package/PluginManager.d.ts +4 -3
- package/PluginManager.js +16 -8
- package/assemblyManager/assembly.d.ts +8 -15
- package/assemblyManager/assembly.js +14 -17
- package/assemblyManager/assemblyManager.d.ts +37 -86
- package/assemblyManager/assemblyManager.js +2 -1
- package/configuration/configurationSlot.js +2 -1
- package/data_adapters/CytobandAdapter.js +1 -1
- package/package.json +3 -3
- package/pluggableElementTypes/ViewType.d.ts +2 -0
- package/pluggableElementTypes/ViewType.js +1 -0
- package/pluggableElementTypes/models/BaseConnectionModelFactory.d.ts +7 -5
- package/pluggableElementTypes/models/BaseConnectionModelFactory.js +3 -2
- package/pluggableElementTypes/models/BaseDisplayModel.d.ts +1 -1
- package/pluggableElementTypes/models/BaseDisplayModel.js +3 -2
- package/pluggableElementTypes/models/BaseTrackModel.d.ts +1 -1
- package/pluggableElementTypes/models/BaseTrackModel.js +1 -1
- package/pluggableElementTypes/models/baseTrackConfig.js +16 -4
- package/rpc/RpcManager.d.ts +1 -1
- package/rpc/RpcManager.js +4 -1
- package/rpc/WebWorkerRpcDriver.d.ts +2 -0
- package/rpc/WebWorkerRpcDriver.js +21 -11
- package/rpc/configSchema.js +4 -1
- package/tsconfig.build.tsbuildinfo +1 -1
- package/ui/AboutDialog.d.ts +6 -0
- package/ui/AboutDialog.js +42 -20
- package/ui/App.d.ts +1 -1
- package/ui/App.js +49 -42
- package/ui/DrawerWidget.js +11 -6
- package/ui/FatalErrorDialog.d.ts +6 -22
- package/ui/FatalErrorDialog.js +10 -29
- package/ui/theme.d.ts +18 -171
- package/ui/theme.js +17 -20
- package/util/calculateStaticBlocks.js +3 -8
- package/util/index.d.ts +5 -1
- package/util/index.js +34 -11
- package/util/simpleFeature.d.ts +1 -2
- package/util/stats.js +7 -5
- package/util/tracks.d.ts +5 -2
- package/util/tracks.js +15 -5
- package/util/types/index.d.ts +1 -1
- package/util/types/index.js +3 -1
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declare namespace _default {
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const source: string;
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const type: string;
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const start: number;
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const end: number;
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const strand: number;
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const phase: number;
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const refName: string;
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const id: string;
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const dbxref: string[];
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const name: string;
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const description: string;
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const gbkey: string;
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const gene: string;
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const gene_biotype: string;
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const subfeatures: ({
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source: string;
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type: string;
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start: number;
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end: number;
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strand: number;
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phase: number;
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refName: string;
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id: string;
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parent: string;
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dbxref: string[];
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name: string;
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gbkey: string;
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gene: string;
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product: string;
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tag: string;
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transcript_id: string;
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subfeatures: ({
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source: string;
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type: string;
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start: number;
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end: number;
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strand: number;
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phase: number;
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refName: string;
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parent: string;
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dbxref: string[];
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gbkey: string;
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gene: string;
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product: string;
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tag: string;
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transcript_id: string;
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uniqueId: string;
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parentId: string;
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id?: undefined;
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name?: undefined;
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note?: undefined;
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protein_id?: undefined;
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} | {
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source: string;
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type: string;
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start: number;
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end: number;
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strand: number;
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phase: number;
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refName: string;
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id: string;
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parent: string;
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dbxref: string[];
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name: string;
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note: string;
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gbkey: string;
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gene: string;
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product: string;
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protein_id: string;
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tag: string;
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uniqueId: string;
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parentId: string;
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transcript_id?: undefined;
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})[];
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uniqueId: string;
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parentId: string;
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} | {
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source: string;
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type: string;
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start: number;
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end: number;
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strand: number;
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phase: number;
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refName: string;
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id: string;
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parent: string;
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dbxref: string[];
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name: string;
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gbkey: string;
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gene: string;
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product: string;
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transcript_id: string;
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subfeatures: ({
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source: string;
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type: string;
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start: number;
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end: number;
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strand: number;
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phase: number;
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refName: string;
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parent: string;
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dbxref: string[];
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gbkey: string;
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gene: string;
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product: string;
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transcript_id: string;
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uniqueId: string;
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parentId: string;
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id?: undefined;
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name?: undefined;
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note?: undefined;
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protein_id?: undefined;
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} | {
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source: string;
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type: string;
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start: number;
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end: number;
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strand: number;
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phase: number;
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refName: string;
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id: string;
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parent: string;
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dbxref: string[];
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name: string;
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note: string;
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gbkey: string;
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gene: string;
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product: string;
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protein_id: string;
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uniqueId: string;
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parentId: string;
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transcript_id?: undefined;
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})[];
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uniqueId: string;
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parentId: string;
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tag?: undefined;
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})[];
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const uniqueId: string;
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}
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export default _default;
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