@jbrowse/bandage-core 9.8.0 → 9.9.0

package/dist/chunks/chunk-IJYFJVIT.js

@@ -0,0 +1,77 @@
+// src/tubeMap/warp.ts
+var MAX_GAP_PX = 24;
+var MAX_GAP_SHARE = 0.5;
+var isReal = (c) => c.bp1 > c.bp0;
+function referenceKnots(columns, bpToScreen) {
+  const real = columns.filter(isReal);
+  if (real.length === 0) {
+    const first = columns[0];
+    return first ? [{ tx: first.x0, sx: bpToScreen(first.bp0) }] : [];
+  }
+  const tx = [];
+  const target = [];
+  const gap = [];
+  real.forEach((c, i) => {
+    tx.push(c.x0, c.x1);
+    target.push(bpToScreen(c.bp0), bpToScreen(c.bp1));
+    gap.push(i === 0 ? 0 : Math.min(c.x0 - real[i - 1].x1, MAX_GAP_PX), 0);
+  });
+  const span = target.at(-1) - target[0];
+  const demand = gap.reduce((a, b) => a + b, 0);
+  const scale = demand > 0 ? Math.min(1, MAX_GAP_SHARE * span / demand) : 1;
+  return spread(target, gap, scale).map((sx, k) => ({ tx: tx[k], sx }));
+}
+function spread(target, gap, scale) {
+  const offset = [];
+  let sum = 0;
+  for (const g of gap) {
+    sum += g * scale;
+    offset.push(sum);
+  }
+  const blocks = [];
+  target.forEach((t, k) => {
+    let block = { mean: t - offset[k], n: 1 };
+    let last = blocks.at(-1);
+    while (last && last.mean >= block.mean) {
+      blocks.pop();
+      const n = last.n + block.n;
+      block = { mean: (last.mean * last.n + block.mean * block.n) / n, n };
+      last = blocks.at(-1);
+    }
+    blocks.push(block);
+  });
+  return blocks.flatMap((b) => Array(b.n).fill(b.mean)).map((q, k) => q + offset[k]);
+}
+function warpX(knots, tx) {
+  const n = knots.length;
+  if (n === 0) {
+    return tx;
+  }
+  const first = knots[0];
+  const last = knots[n - 1];
+  if (tx <= first.tx) {
+    return first.sx + (tx - first.tx);
+  }
+  if (tx >= last.tx) {
+    return last.sx + (tx - last.tx);
+  }
+  let lo = 0;
+  let hi = n - 1;
+  while (hi - lo > 1) {
+    const mid = lo + hi >> 1;
+    if (knots[mid].tx <= tx) {
+      lo = mid;
+    } else {
+      hi = mid;
+    }
+  }
+  const a = knots[lo];
+  const b = knots[hi];
+  const span = b.tx - a.tx;
+  return span > 0 ? a.sx + (tx - a.tx) / span * (b.sx - a.sx) : a.sx;
+}
+
+export {
+  referenceKnots,
+  warpX
+};

package/dist/chunks/{chunk-OCMBULGN.js → chunk-J7YKQ5YW.js}

@@ -4,7 +4,7 @@ import {
 import {
   pathOrigin,
   surveyPaths
-} from "./chunk-ST2IBUAN.js";
+} from "./chunk-IGJCTPFB.js";
 
 // src/gfa/gfaConverter.ts
 function surveySegments(gfaGraph) {

package/dist/chunks/{chunk-VZQ4FKLR.js → chunk-JABM3MUS.js}

@@ -1,7 +1,7 @@
 import {
   referenceKnots,
   warpX
-} from "./chunk-KQFOCDFY.js";
+} from "./chunk-IJYFJVIT.js";
 
 // src/tubeMap/frame.ts
 var MIN_TUBE_Y_SCALE = 0.05;

package/dist/chunks/{chunk-ZBWMTXTM.js → chunk-KJEMKHVB.js}

@@ -1,7 +1,7 @@
 import {
   computeColorSchemeRange,
   getNodeColor
-} from "./chunk-BOHK5BD3.js";
+} from "./chunk-F4BKWWLS.js";
 import {
   abgrToCssRgba
 } from "./chunk-G2FD7S3C.js";

package/dist/chunks/{chunk-QMJXHYVQ.js → chunk-MECWJY2R.js}

@@ -2,7 +2,7 @@ import {
   alongRow,
   boxesGenes,
   rowPitch
-} from "./chunk-EPREHMKU.js";
+} from "./chunk-P6O4RSOQ.js";
 import {
   LABEL_CHAR_PX
 } from "./chunk-AB35TJST.js";
@@ -11,7 +11,7 @@ import {
 } from "./chunk-NNODIW4U.js";
 import {
   pathOrigin
-} from "./chunk-ST2IBUAN.js";
+} from "./chunk-IGJCTPFB.js";
 
 // src/layout/walkStrip.ts
 function walkStripApplies(o) {

package/dist/chunks/{chunk-EPREHMKU.js → chunk-P6O4RSOQ.js}

@@ -3,10 +3,10 @@ import {
   RAMP_GRADIENT_STOPS,
   rampHueCss,
   rampStops
-} from "./chunk-QG5IVMRS.js";
+} from "./chunk-YS7VA5SI.js";
 import {
   REFERENCE_RAMP_ALT_CSS
-} from "./chunk-BOHK5BD3.js";
+} from "./chunk-F4BKWWLS.js";
 import {
   LABEL_CHAR_PX
 } from "./chunk-AB35TJST.js";

package/dist/chunks/{chunk-373Y3KUJ.js → chunk-RK3MF4FD.js}

@@ -2,7 +2,7 @@ import {
   LIFT_BACKDROP_CSS,
   computeColorSchemeRange,
   getNodeColor
-} from "./chunk-BOHK5BD3.js";
+} from "./chunk-F4BKWWLS.js";
 import {
   abgrToCssRgba
 } from "./chunk-G2FD7S3C.js";

package/dist/chunks/{chunk-C55SC5AJ.js → chunk-ROQGMTFB.js}

@@ -1,6 +1,6 @@
 import {
   bubbleSubgraph
-} from "./chunk-VHW7FDHU.js";
+} from "./chunk-A6PSWTLX.js";
 import {
   coversGraph
 } from "./chunk-EHUBJDDB.js";

package/dist/chunks/{chunk-3C5UXR2U.js → chunk-TOVOJNT7.js}

@@ -1,6 +1,6 @@
 import {
   walkRows
-} from "./chunk-MAUEPAMG.js";
+} from "./chunk-6PYZYBBF.js";
 import {
   ROW_HEIGHT_PX
 } from "./chunk-CPMHA4W5.js";

package/dist/chunks/{chunk-JEF73V3A.js → chunk-UVZ56CZX.js}

@@ -1,5 +1,5 @@
 // src/version.ts
-var version = "9.8.0";
+var version = "9.9.0";
 
 export {
   version

package/dist/chunks/{chunk-5QOMIEHX.js → chunk-WVBYR6Y7.js}

@@ -1,9 +1,9 @@
 import {
   pathSteps
-} from "./chunk-6N7H22SS.js";
+} from "./chunk-HOZI3FBG.js";
 import {
   pathOrigin
-} from "./chunk-ST2IBUAN.js";
+} from "./chunk-IGJCTPFB.js";
 
 // src/tubeMap/bundle.ts
 function bundleRoutes(graph, groupOf = () => "", merge = true) {

package/dist/chunks/{chunk-BV64PQ2C.js → chunk-YAN2ZPNV.js}

@@ -1,7 +1,7 @@
 import {
   engineKey,
   forceLayout
-} from "./chunk-ZGRYFUXE.js";
+} from "./chunk-FPTI3WAV.js";
 
 // src/layout/forceCache.ts
 var DEFAULT_SIZE = 4;

package/dist/chunks/{chunk-BLRJ6IGK.js → chunk-YGN4KL7W.js}

@@ -1,6 +1,6 @@
 import {
   ENGINE_DEFAULTS
-} from "./chunk-ZGRYFUXE.js";
+} from "./chunk-FPTI3WAV.js";
 
 // src/figureSettings.ts
 var FIGURE_DEFAULTS = {

package/dist/chunks/{chunk-QG5IVMRS.js → chunk-YS7VA5SI.js}

@@ -1,6 +1,6 @@
 import {
   REFERENCE_RAMP_MAX_HUE
-} from "./chunk-BOHK5BD3.js";
+} from "./chunk-F4BKWWLS.js";
 
 // src/referenceRampCss.ts
 function rampHueCss(hue) {

package/dist/chunks/{chunk-XKM5OHQQ.js → chunk-ZBLKAWSD.js}

@@ -1,6 +1,6 @@
 import {
   clampZoom
-} from "./chunk-ZGRYFUXE.js";
+} from "./chunk-FPTI3WAV.js";
 
 // src/viewport.ts
 function axisScaleOf(scale, pixelRows) {

package/dist/cli/figure.js

@@ -14,9 +14,9 @@ import "../chunks/chunk-LYJ4US66.js";
 import {
   LAYOUT_MODES,
   layoutModeByValue
-} from "../chunks/chunk-Z7UWHVOM.js";
+} from "../chunks/chunk-IJRNMO4D.js";
 import "../chunks/chunk-LOEA5IHZ.js";
-import "../chunks/chunk-6N7H22SS.js";
+import "../chunks/chunk-HOZI3FBG.js";
 import "../chunks/chunk-CWFNEKST.js";
 import "../chunks/chunk-L3O7AWLI.js";
 import "../chunks/chunk-TZFWUT2C.js";
@@ -35,32 +35,32 @@ import "../chunks/chunk-LTUWJKHD.js";
 import "../chunks/chunk-WSIFAZU7.js";
 import {
   figureSvg
-} from "../chunks/chunk-CG77WIFD.js";
-import "../chunks/chunk-QMJXHYVQ.js";
+} from "../chunks/chunk-BEMPOHHG.js";
+import "../chunks/chunk-47DYCZOK.js";
+import "../chunks/chunk-MECWJY2R.js";
 import "../chunks/chunk-WBCOREDZ.js";
 import "../chunks/chunk-4BYTEJGW.js";
 import "../chunks/chunk-LOCJN3BZ.js";
-import "../chunks/chunk-47DYCZOK.js";
 import {
   genesOnRow,
   placeRowGenes
-} from "../chunks/chunk-EPREHMKU.js";
+} from "../chunks/chunk-P6O4RSOQ.js";
 import "../chunks/chunk-BUBZ32IC.js";
 import "../chunks/chunk-3S3YVOJ7.js";
-import "../chunks/chunk-XKM5OHQQ.js";
-import "../chunks/chunk-3FVITQAJ.js";
-import "../chunks/chunk-AM3P3WWO.js";
+import "../chunks/chunk-ZBLKAWSD.js";
+import "../chunks/chunk-EE37PVQY.js";
+import "../chunks/chunk-F5BYHLIN.js";
 import "../chunks/chunk-2LQ5BWT7.js";
-import "../chunks/chunk-QG5IVMRS.js";
-import "../chunks/chunk-BOHK5BD3.js";
+import "../chunks/chunk-YS7VA5SI.js";
+import "../chunks/chunk-F4BKWWLS.js";
 import "../chunks/chunk-G2FD7S3C.js";
-import "../chunks/chunk-JEF73V3A.js";
-import "../chunks/chunk-3C5UXR2U.js";
+import "../chunks/chunk-UVZ56CZX.js";
+import "../chunks/chunk-TOVOJNT7.js";
 import {
   filterSamples,
   walkRows
-} from "../chunks/chunk-MAUEPAMG.js";
-import "../chunks/chunk-7GBL7SJY.js";
+} from "../chunks/chunk-6PYZYBBF.js";
+import "../chunks/chunk-EDASNMLY.js";
 import "../chunks/chunk-PBENCR5L.js";
 import {
   featuresOnBackbone,
@@ -80,16 +80,17 @@ import {
   engineSettingsOf,
   forceLayout,
   loadGraph
-} from "../chunks/chunk-ZGRYFUXE.js";
+} from "../chunks/chunk-FPTI3WAV.js";
 import "../chunks/chunk-PUG7LXDF.js";
 import "../chunks/chunk-IGVV37VI.js";
-import "../chunks/chunk-OCMBULGN.js";
+import "../chunks/chunk-J7YKQ5YW.js";
+import "../chunks/chunk-G45YY72K.js";
 import "../chunks/chunk-OA7RIMZ2.js";
 import "../chunks/chunk-QYBZZI5H.js";
 import "../chunks/chunk-CDLPYR5O.js";
 import "../chunks/chunk-JVLURPFW.js";
 import "../chunks/chunk-ES2N6V56.js";
-import "../chunks/chunk-ST2IBUAN.js";
+import "../chunks/chunk-IGJCTPFB.js";
 import "../chunks/chunk-BPLIXMH7.js";
 import "../chunks/chunk-TAMCZHLW.js";
 import "../chunks/chunk-UVBGRJQX.js";

package/dist/cli/fold.js

@@ -7,16 +7,17 @@ import {
 } from "../chunks/chunk-B4645SM2.js";
 import {
   loadGraph
-} from "../chunks/chunk-ZGRYFUXE.js";
+} from "../chunks/chunk-FPTI3WAV.js";
 import "../chunks/chunk-PUG7LXDF.js";
 import "../chunks/chunk-IGVV37VI.js";
-import "../chunks/chunk-OCMBULGN.js";
+import "../chunks/chunk-J7YKQ5YW.js";
+import "../chunks/chunk-G45YY72K.js";
 import "../chunks/chunk-OA7RIMZ2.js";
 import "../chunks/chunk-QYBZZI5H.js";
 import "../chunks/chunk-CDLPYR5O.js";
 import "../chunks/chunk-JVLURPFW.js";
 import "../chunks/chunk-ES2N6V56.js";
-import "../chunks/chunk-ST2IBUAN.js";
+import "../chunks/chunk-IGJCTPFB.js";
 import "../chunks/chunk-BPLIXMH7.js";
 import "../chunks/chunk-TAMCZHLW.js";
 import "../chunks/chunk-UVBGRJQX.js";

package/dist/figure.js

@@ -1,25 +1,25 @@
 import {
   figureSvg
-} from "./chunks/chunk-CG77WIFD.js";
-import "./chunks/chunk-QMJXHYVQ.js";
+} from "./chunks/chunk-BEMPOHHG.js";
+import "./chunks/chunk-47DYCZOK.js";
+import "./chunks/chunk-MECWJY2R.js";
 import "./chunks/chunk-WBCOREDZ.js";
 import "./chunks/chunk-4BYTEJGW.js";
 import "./chunks/chunk-LOCJN3BZ.js";
-import "./chunks/chunk-47DYCZOK.js";
-import "./chunks/chunk-EPREHMKU.js";
+import "./chunks/chunk-P6O4RSOQ.js";
 import "./chunks/chunk-BUBZ32IC.js";
 import "./chunks/chunk-3S3YVOJ7.js";
-import "./chunks/chunk-XKM5OHQQ.js";
-import "./chunks/chunk-3FVITQAJ.js";
-import "./chunks/chunk-AM3P3WWO.js";
+import "./chunks/chunk-ZBLKAWSD.js";
+import "./chunks/chunk-EE37PVQY.js";
+import "./chunks/chunk-F5BYHLIN.js";
 import "./chunks/chunk-2LQ5BWT7.js";
-import "./chunks/chunk-QG5IVMRS.js";
-import "./chunks/chunk-BOHK5BD3.js";
+import "./chunks/chunk-YS7VA5SI.js";
+import "./chunks/chunk-F4BKWWLS.js";
 import "./chunks/chunk-G2FD7S3C.js";
-import "./chunks/chunk-JEF73V3A.js";
-import "./chunks/chunk-3C5UXR2U.js";
-import "./chunks/chunk-MAUEPAMG.js";
-import "./chunks/chunk-7GBL7SJY.js";
+import "./chunks/chunk-UVZ56CZX.js";
+import "./chunks/chunk-TOVOJNT7.js";
+import "./chunks/chunk-6PYZYBBF.js";
+import "./chunks/chunk-EDASNMLY.js";
 import "./chunks/chunk-PBENCR5L.js";
 import "./chunks/chunk-RAKOB6IV.js";
 import "./chunks/chunk-DRG4236Y.js";
@@ -31,16 +31,17 @@ import "./chunks/chunk-AB35TJST.js";
 import "./chunks/chunk-JKJWSY4V.js";
 import "./chunks/chunk-NNODIW4U.js";
 import "./chunks/chunk-XV4P5KEQ.js";
-import "./chunks/chunk-ZGRYFUXE.js";
+import "./chunks/chunk-FPTI3WAV.js";
 import "./chunks/chunk-PUG7LXDF.js";
 import "./chunks/chunk-IGVV37VI.js";
-import "./chunks/chunk-OCMBULGN.js";
+import "./chunks/chunk-J7YKQ5YW.js";
+import "./chunks/chunk-G45YY72K.js";
 import "./chunks/chunk-OA7RIMZ2.js";
 import "./chunks/chunk-QYBZZI5H.js";
 import "./chunks/chunk-CDLPYR5O.js";
 import "./chunks/chunk-JVLURPFW.js";
 import "./chunks/chunk-ES2N6V56.js";
-import "./chunks/chunk-ST2IBUAN.js";
+import "./chunks/chunk-IGJCTPFB.js";
 import "./chunks/chunk-BPLIXMH7.js";
 import "./chunks/chunk-TAMCZHLW.js";
 import "./chunks/chunk-UVBGRJQX.js";

package/dist/figureSettings.js

@@ -1,17 +1,18 @@
 import {
   FIGURE_DEFAULTS,
   figureSpecSettings
-} from "./chunks/chunk-BLRJ6IGK.js";
-import "./chunks/chunk-ZGRYFUXE.js";
+} from "./chunks/chunk-YGN4KL7W.js";
+import "./chunks/chunk-FPTI3WAV.js";
 import "./chunks/chunk-PUG7LXDF.js";
 import "./chunks/chunk-IGVV37VI.js";
-import "./chunks/chunk-OCMBULGN.js";
+import "./chunks/chunk-J7YKQ5YW.js";
+import "./chunks/chunk-G45YY72K.js";
 import "./chunks/chunk-OA7RIMZ2.js";
 import "./chunks/chunk-QYBZZI5H.js";
 import "./chunks/chunk-CDLPYR5O.js";
 import "./chunks/chunk-JVLURPFW.js";
 import "./chunks/chunk-ES2N6V56.js";
-import "./chunks/chunk-ST2IBUAN.js";
+import "./chunks/chunk-IGJCTPFB.js";
 import "./chunks/chunk-BPLIXMH7.js";
 import "./chunks/chunk-TAMCZHLW.js";
 import "./chunks/chunk-UVBGRJQX.js";

package/dist/gfa/gfaConverter.js

@@ -1,9 +1,9 @@
 import {
   convertGFAToGraph
-} from "../chunks/chunk-OCMBULGN.js";
+} from "../chunks/chunk-J7YKQ5YW.js";
 import "../chunks/chunk-QYBZZI5H.js";
 import "../chunks/chunk-CDLPYR5O.js";
-import "../chunks/chunk-ST2IBUAN.js";
+import "../chunks/chunk-IGJCTPFB.js";
 import "../chunks/chunk-BPLIXMH7.js";
 import "../chunks/chunk-FYQWPEEY.js";
 export {

package/dist/gfa/gfaTables.js

@@ -0,0 +1,6 @@
+import {
+  gfaTables
+} from "../chunks/chunk-G45YY72K.js";
+export {
+  gfaTables
+};

package/dist/index.js

@@ -1,16 +1,24 @@
 import {
   wheelZoomFactor
 } from "./chunks/chunk-TDQLINVI.js";
+import {
+  tubeMapFrame,
+  tubeMapNodeAt
+} from "./chunks/chunk-JABM3MUS.js";
 import {
   drawTubeMapGenes,
   tubeMapGenes
 } from "./chunks/chunk-WEDZ76AK.js";
 import {
   tubeMapNodeColors
-} from "./chunks/chunk-ZBWMTXTM.js";
+} from "./chunks/chunk-KJEMKHVB.js";
+import {
+  referenceKnots,
+  warpX
+} from "./chunks/chunk-IJYFJVIT.js";
 import {
   bundleRoutes
-} from "./chunks/chunk-5QOMIEHX.js";
+} from "./chunks/chunk-WVBYR6Y7.js";
 import {
   connectorAt,
   drawLitConnector,
@@ -29,26 +37,18 @@ import {
   tubeMapMismatchAt,
   tubeMapPicture,
   tubeMapTrackAt
-} from "./chunks/chunk-75HR3756.js";
+} from "./chunks/chunk-2NROXCK3.js";
 import "./chunks/chunk-XXT2JCAC.js";
-import {
-  tubeMapFrame,
-  tubeMapNodeAt
-} from "./chunks/chunk-VZQ4FKLR.js";
-import {
-  referenceKnots,
-  warpX
-} from "./chunks/chunk-KQFOCDFY.js";
 import {
   createForceLayoutCache
-} from "./chunks/chunk-BV64PQ2C.js";
+} from "./chunks/chunk-YAN2ZPNV.js";
 import {
   graphBubbles,
   superbubblesFromGraph
-} from "./chunks/chunk-C55SC5AJ.js";
+} from "./chunks/chunk-ROQGMTFB.js";
 import {
   bubbleSubgraph
-} from "./chunks/chunk-VHW7FDHU.js";
+} from "./chunks/chunk-A6PSWTLX.js";
 import {
   genesFromBed,
   genesFromGff3Lines,
@@ -73,7 +73,7 @@ import {
   drawReferenceStrip,
   referenceStripBlocks,
   stripBlockAt
-} from "./chunks/chunk-373Y3KUJ.js";
+} from "./chunks/chunk-RK3MF4FD.js";
 import {
   LAYOUT_ENGINES,
   layoutEngine
@@ -87,9 +87,9 @@ import {
   LAYOUT_MODES,
   layoutModeByValue,
   modeUsesLayoutEngine
-} from "./chunks/chunk-Z7UWHVOM.js";
+} from "./chunks/chunk-IJRNMO4D.js";
 import "./chunks/chunk-LOEA5IHZ.js";
-import "./chunks/chunk-6N7H22SS.js";
+import "./chunks/chunk-HOZI3FBG.js";
 import "./chunks/chunk-CWFNEKST.js";
 import "./chunks/chunk-L3O7AWLI.js";
 import "./chunks/chunk-TZFWUT2C.js";
@@ -122,7 +122,10 @@ import {
 } from "./chunks/chunk-AZFVORTC.js";
 import {
   figureSvg
-} from "./chunks/chunk-CG77WIFD.js";
+} from "./chunks/chunk-BEMPOHHG.js";
+import {
+  svgCanvas
+} from "./chunks/chunk-47DYCZOK.js";
 import {
   WALK_STRIP_CEILING_PX,
   cutsWholeWalks,
@@ -134,7 +137,7 @@ import {
   walkStripApplies,
   walkStripFrame,
   walkStripLabelsTree
-} from "./chunks/chunk-QMJXHYVQ.js";
+} from "./chunks/chunk-MECWJY2R.js";
 import {
   Canvas2DRenderer
 } from "./chunks/chunk-WBCOREDZ.js";
@@ -144,9 +147,6 @@ import {
 import {
   layoutGeometryInputs
 } from "./chunks/chunk-LOCJN3BZ.js";
-import {
-  svgCanvas
-} from "./chunks/chunk-47DYCZOK.js";
 import {
   BAR_PX,
   CALL_TICK,
@@ -173,7 +173,7 @@ import {
   walkRowsKey,
   walkRowsKeyTree,
   walkRowsTree
-} from "./chunks/chunk-EPREHMKU.js";
+} from "./chunks/chunk-P6O4RSOQ.js";
 import {
   genePins
 } from "./chunks/chunk-BUBZ32IC.js";
@@ -189,12 +189,12 @@ import {
   screenToLayout,
   viewportOf,
   zoomAbout
-} from "./chunks/chunk-XKM5OHQQ.js";
+} from "./chunks/chunk-ZBLKAWSD.js";
 import {
   facetLifts,
   walkHighlight,
   walkLift
-} from "./chunks/chunk-3FVITQAJ.js";
+} from "./chunks/chunk-EE37PVQY.js";
 import {
   WALK_FIELDS,
   WALK_SCHEMES,
@@ -202,7 +202,7 @@ import {
   encodingSwatchCss,
   resolveEncoding,
   schemeCss
-} from "./chunks/chunk-AM3P3WWO.js";
+} from "./chunks/chunk-F5BYHLIN.js";
 import {
   rangeText,
   walkKey,
@@ -213,29 +213,29 @@ import {
   rampHue,
   rampHueCss,
   rampStops
-} from "./chunks/chunk-QG5IVMRS.js";
+} from "./chunks/chunk-YS7VA5SI.js";
 import {
   REFERENCE_RAMP_MAX_HUE,
   buildGeometry,
   computeReferenceRamp
-} from "./chunks/chunk-BOHK5BD3.js";
+} from "./chunks/chunk-F4BKWWLS.js";
 import "./chunks/chunk-G2FD7S3C.js";
 import {
   version
-} from "./chunks/chunk-JEF73V3A.js";
+} from "./chunks/chunk-UVZ56CZX.js";
 import {
   walkRowLabels,
   walkRowsExtent
-} from "./chunks/chunk-3C5UXR2U.js";
+} from "./chunks/chunk-TOVOJNT7.js";
 import {
   filterSamples,
   walkRows
-} from "./chunks/chunk-MAUEPAMG.js";
+} from "./chunks/chunk-6PYZYBBF.js";
 import {
   pathColorsLegible,
   pathLegend,
   walkLabelsOf
-} from "./chunks/chunk-7GBL7SJY.js";
+} from "./chunks/chunk-EDASNMLY.js";
 import {
   NODE_WIDTHS,
   maxNodeWidthPx,
@@ -293,7 +293,7 @@ import {
 import {
   FIGURE_DEFAULTS,
   figureSpecSettings
-} from "./chunks/chunk-BLRJ6IGK.js";
+} from "./chunks/chunk-YGN4KL7W.js";
 import {
   ENGINE_DEFAULTS,
   FIT_PADDING,
@@ -306,10 +306,13 @@ import {
   forceLayout,
   layoutExtent,
   loadGraph
-} from "./chunks/chunk-ZGRYFUXE.js";
+} from "./chunks/chunk-FPTI3WAV.js";
 import "./chunks/chunk-PUG7LXDF.js";
 import "./chunks/chunk-IGVV37VI.js";
-import "./chunks/chunk-OCMBULGN.js";
+import "./chunks/chunk-J7YKQ5YW.js";
+import {
+  gfaTables
+} from "./chunks/chunk-G45YY72K.js";
 import {
   graphFromTables,
   graphTablesGFA
@@ -318,7 +321,7 @@ import "./chunks/chunk-QYBZZI5H.js";
 import "./chunks/chunk-CDLPYR5O.js";
 import "./chunks/chunk-JVLURPFW.js";
 import "./chunks/chunk-ES2N6V56.js";
-import "./chunks/chunk-ST2IBUAN.js";
+import "./chunks/chunk-IGJCTPFB.js";
 import {
   panSNContig,
   panSNHaplotype,
@@ -441,6 +444,7 @@ export {
   genesFromText,
   genesOnRow,
   getDpr,
+  gfaTables,
   graphBackbone,
   graphBubbles,
   graphFromTables,