@jbrowse/bandage-core 9.7.0 → 9.8.0

This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
@@ -2,7 +2,7 @@ import {
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  LIFT_BACKDROP_CSS,
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  computeColorSchemeRange,
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  getNodeColor
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- } from "./chunk-BR25DGIJ.js";
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+ } from "./chunk-BOHK5BD3.js";
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  import {
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  abgrToCssRgba
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  } from "./chunk-G2FD7S3C.js";
@@ -1,7 +1,7 @@
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  import {
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  encodedColor,
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  resolveEncoding
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- } from "./chunk-XPT66H6H.js";
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+ } from "./chunk-AM3P3WWO.js";
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  import {
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  pathOrigin
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  } from "./chunk-ST2IBUAN.js";
@@ -2,7 +2,7 @@ import {
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  REFERENCE_RAMP_ALT_COLOR,
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  REFERENCE_RAMP_MAX_HUE,
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  hslToRgb
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- } from "./chunk-BR25DGIJ.js";
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+ } from "./chunk-BOHK5BD3.js";
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  import {
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  packAbgr
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  } from "./chunk-G2FD7S3C.js";
@@ -579,7 +579,7 @@ function buildGeometry(options) {
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  };
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  const edgeCurveStart = edgeCurves.length;
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  const arrowStart = arrows.length;
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- const laneWalks = highlight && onWalk && !ribbons ? highlight.walks : void 0;
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+ const laneWalks = highlight?.walks.length && onWalk && !ribbons ? highlight.walks : void 0;
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  if (laneWalks) {
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  const fromNode = nodeById.get(edge.from);
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  const width = fromNode ? nodeWidthPx(fromNode, contigThickness, nodeWidth, depthNorm) : contigThickness;
@@ -627,7 +627,7 @@ function buildGeometry(options) {
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  buildSingleEdge(
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  offset.x,
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  offset.y,
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- highlight && !highlight.names.has(edge.pathIds[pathIdx]) ? fadeAbgr(ribbonColor, FADED_ALPHA) : ribbonColor,
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+ highlight && (highlight.walks.length ? !highlight.names.has(edge.pathIds[pathIdx]) : !onWalk) ? fadeAbgr(ribbonColor, FADED_ALPHA) : ribbonColor,
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  pathIdx === arrowRibbon ? edgeColor : void 0
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  );
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  }
@@ -663,7 +663,7 @@ function buildGeometry(options) {
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  const slots = nodePathSlots.get(nodeId);
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  const slotWidth = width / pathCount;
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  const drawable = segments.length >= 2;
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- const lanes = highlight && !faded && !slots?.length ? highlight.walks : void 0;
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+ const lanes = highlight?.walks.length && !faded && !slots?.length ? highlight.walks : void 0;
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  if (drawable && lanes) {
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  const laneWidth = Math.max(width / lanes.length, MIN_WALK_LANE_PX);
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  const normals = pointNormalsOf(segments, yToX);
@@ -2,7 +2,7 @@ import {
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  stripGeneGaps,
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  walkStripFrame,
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  walkStripLabelsTree
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- } from "./chunk-UD5FOCI2.js";
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+ } from "./chunk-QMJXHYVQ.js";
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  import {
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  Canvas2DRenderer
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  } from "./chunk-WBCOREDZ.js";
@@ -16,7 +16,7 @@ import {
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  walkRowsKey,
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  walkRowsKeyTree,
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  walkRowsTree
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- } from "./chunk-GFRPX6M2.js";
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+ } from "./chunk-EPREHMKU.js";
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  import {
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  genePins
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  } from "./chunk-BUBZ32IC.js";
@@ -31,10 +31,10 @@ import {
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  import {
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  facetLifts,
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  walkLift
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- } from "./chunk-LFKMASER.js";
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+ } from "./chunk-3FVITQAJ.js";
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  import {
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  encodingStops
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- } from "./chunk-XPT66H6H.js";
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+ } from "./chunk-AM3P3WWO.js";
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  import {
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  rangeText,
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  walkKey
@@ -42,10 +42,10 @@ import {
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  import {
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  buildGeometry,
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  computeReferenceRamp
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- } from "./chunk-BR25DGIJ.js";
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+ } from "./chunk-BOHK5BD3.js";
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  import {
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  version
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- } from "./chunk-ESRCSSS2.js";
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+ } from "./chunk-JEF73V3A.js";
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  import {
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  walkRowLabels,
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  walkRowsExtent
@@ -3,10 +3,10 @@ import {
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  RAMP_GRADIENT_STOPS,
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  rampHueCss,
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  rampStops
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- } from "./chunk-OXTR3BVF.js";
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+ } from "./chunk-QG5IVMRS.js";
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  import {
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  REFERENCE_RAMP_ALT_CSS
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- } from "./chunk-BR25DGIJ.js";
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+ } from "./chunk-BOHK5BD3.js";
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  import {
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  LABEL_CHAR_PX
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  } from "./chunk-AB35TJST.js";
@@ -1,5 +1,5 @@
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  // src/version.ts
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- var version = "9.7.0";
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+ var version = "9.8.0";
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  export {
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  version
@@ -1,6 +1,6 @@
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  import {
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  REFERENCE_RAMP_MAX_HUE
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- } from "./chunk-BR25DGIJ.js";
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+ } from "./chunk-BOHK5BD3.js";
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  // src/referenceRampCss.ts
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  function rampHueCss(hue) {
@@ -2,7 +2,7 @@ import {
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  alongRow,
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  boxesGenes,
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  rowPitch
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- } from "./chunk-GFRPX6M2.js";
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+ } from "./chunk-EPREHMKU.js";
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  import {
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  LABEL_CHAR_PX
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  } from "./chunk-AB35TJST.js";
@@ -1,7 +1,7 @@
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  import {
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  computeColorSchemeRange,
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  getNodeColor
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- } from "./chunk-BR25DGIJ.js";
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+ } from "./chunk-BOHK5BD3.js";
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  import {
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  abgrToCssRgba
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  } from "./chunk-G2FD7S3C.js";
@@ -35,8 +35,8 @@ import "../chunks/chunk-LTUWJKHD.js";
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  import "../chunks/chunk-WSIFAZU7.js";
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  import {
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  figureSvg
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- } from "../chunks/chunk-7FARTP3U.js";
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- import "../chunks/chunk-UD5FOCI2.js";
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+ } from "../chunks/chunk-CG77WIFD.js";
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+ import "../chunks/chunk-QMJXHYVQ.js";
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  import "../chunks/chunk-WBCOREDZ.js";
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  import "../chunks/chunk-4BYTEJGW.js";
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  import "../chunks/chunk-LOCJN3BZ.js";
@@ -44,17 +44,17 @@ import "../chunks/chunk-47DYCZOK.js";
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  import {
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  genesOnRow,
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  placeRowGenes
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- } from "../chunks/chunk-GFRPX6M2.js";
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+ } from "../chunks/chunk-EPREHMKU.js";
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  import "../chunks/chunk-BUBZ32IC.js";
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  import "../chunks/chunk-3S3YVOJ7.js";
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  import "../chunks/chunk-XKM5OHQQ.js";
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- import "../chunks/chunk-LFKMASER.js";
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- import "../chunks/chunk-XPT66H6H.js";
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+ import "../chunks/chunk-3FVITQAJ.js";
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+ import "../chunks/chunk-AM3P3WWO.js";
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  import "../chunks/chunk-2LQ5BWT7.js";
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- import "../chunks/chunk-OXTR3BVF.js";
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- import "../chunks/chunk-BR25DGIJ.js";
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+ import "../chunks/chunk-QG5IVMRS.js";
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+ import "../chunks/chunk-BOHK5BD3.js";
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  import "../chunks/chunk-G2FD7S3C.js";
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- import "../chunks/chunk-ESRCSSS2.js";
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+ import "../chunks/chunk-JEF73V3A.js";
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  import "../chunks/chunk-3C5UXR2U.js";
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  import {
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  filterSamples,
package/dist/figure.js CHANGED
@@ -1,22 +1,22 @@
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  import {
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  figureSvg
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- } from "./chunks/chunk-7FARTP3U.js";
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- import "./chunks/chunk-UD5FOCI2.js";
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+ } from "./chunks/chunk-CG77WIFD.js";
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+ import "./chunks/chunk-QMJXHYVQ.js";
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  import "./chunks/chunk-WBCOREDZ.js";
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  import "./chunks/chunk-4BYTEJGW.js";
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  import "./chunks/chunk-LOCJN3BZ.js";
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  import "./chunks/chunk-47DYCZOK.js";
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- import "./chunks/chunk-GFRPX6M2.js";
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+ import "./chunks/chunk-EPREHMKU.js";
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  import "./chunks/chunk-BUBZ32IC.js";
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  import "./chunks/chunk-3S3YVOJ7.js";
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  import "./chunks/chunk-XKM5OHQQ.js";
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- import "./chunks/chunk-LFKMASER.js";
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- import "./chunks/chunk-XPT66H6H.js";
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+ import "./chunks/chunk-3FVITQAJ.js";
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+ import "./chunks/chunk-AM3P3WWO.js";
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  import "./chunks/chunk-2LQ5BWT7.js";
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- import "./chunks/chunk-OXTR3BVF.js";
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- import "./chunks/chunk-BR25DGIJ.js";
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+ import "./chunks/chunk-QG5IVMRS.js";
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+ import "./chunks/chunk-BOHK5BD3.js";
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  import "./chunks/chunk-G2FD7S3C.js";
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- import "./chunks/chunk-ESRCSSS2.js";
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+ import "./chunks/chunk-JEF73V3A.js";
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  import "./chunks/chunk-3C5UXR2U.js";
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  import "./chunks/chunk-MAUEPAMG.js";
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  import "./chunks/chunk-7GBL7SJY.js";
package/dist/index.js CHANGED
@@ -7,7 +7,7 @@ import {
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  } from "./chunks/chunk-WEDZ76AK.js";
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  import {
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  tubeMapNodeColors
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- } from "./chunks/chunk-A4MYLGKG.js";
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+ } from "./chunks/chunk-ZBWMTXTM.js";
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  import {
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  bundleRoutes
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  } from "./chunks/chunk-5QOMIEHX.js";
@@ -73,7 +73,7 @@ import {
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  drawReferenceStrip,
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  referenceStripBlocks,
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  stripBlockAt
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- } from "./chunks/chunk-CVYDR2OP.js";
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+ } from "./chunks/chunk-373Y3KUJ.js";
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  import {
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  LAYOUT_ENGINES,
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  layoutEngine
@@ -122,7 +122,7 @@ import {
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  } from "./chunks/chunk-AZFVORTC.js";
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  import {
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  figureSvg
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- } from "./chunks/chunk-7FARTP3U.js";
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+ } from "./chunks/chunk-CG77WIFD.js";
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  import {
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  WALK_STRIP_CEILING_PX,
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  cutsWholeWalks,
@@ -134,7 +134,7 @@ import {
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  walkStripApplies,
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  walkStripFrame,
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  walkStripLabelsTree
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- } from "./chunks/chunk-UD5FOCI2.js";
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+ } from "./chunks/chunk-QMJXHYVQ.js";
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  import {
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  Canvas2DRenderer
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  } from "./chunks/chunk-WBCOREDZ.js";
@@ -173,7 +173,7 @@ import {
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  walkRowsKey,
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  walkRowsKeyTree,
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  walkRowsTree
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- } from "./chunks/chunk-GFRPX6M2.js";
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+ } from "./chunks/chunk-EPREHMKU.js";
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  import {
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  genePins
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  } from "./chunks/chunk-BUBZ32IC.js";
@@ -194,7 +194,7 @@ import {
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  facetLifts,
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  walkHighlight,
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  walkLift
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- } from "./chunks/chunk-LFKMASER.js";
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+ } from "./chunks/chunk-3FVITQAJ.js";
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  import {
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  WALK_FIELDS,
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  WALK_SCHEMES,
@@ -202,7 +202,7 @@ import {
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  encodingSwatchCss,
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  resolveEncoding,
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  schemeCss
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- } from "./chunks/chunk-XPT66H6H.js";
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+ } from "./chunks/chunk-AM3P3WWO.js";
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  import {
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  rangeText,
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  walkKey,
@@ -213,16 +213,16 @@ import {
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  rampHue,
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  rampHueCss,
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  rampStops
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- } from "./chunks/chunk-OXTR3BVF.js";
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+ } from "./chunks/chunk-QG5IVMRS.js";
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  import {
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  REFERENCE_RAMP_MAX_HUE,
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  buildGeometry,
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  computeReferenceRamp
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- } from "./chunks/chunk-BR25DGIJ.js";
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+ } from "./chunks/chunk-BOHK5BD3.js";
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  import "./chunks/chunk-G2FD7S3C.js";
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  import {
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  version
225
- } from "./chunks/chunk-ESRCSSS2.js";
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+ } from "./chunks/chunk-JEF73V3A.js";
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  import {
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  walkRowLabels,
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  walkRowsExtent
@@ -26,9 +26,9 @@ import {
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  walkRowsKey,
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  walkRowsKeyTree,
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  walkRowsTree
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- } from "../chunks/chunk-GFRPX6M2.js";
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- import "../chunks/chunk-OXTR3BVF.js";
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- import "../chunks/chunk-BR25DGIJ.js";
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+ } from "../chunks/chunk-EPREHMKU.js";
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+ import "../chunks/chunk-QG5IVMRS.js";
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+ import "../chunks/chunk-BOHK5BD3.js";
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  import "../chunks/chunk-G2FD7S3C.js";
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  import "../chunks/chunk-7GBL7SJY.js";
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  import "../chunks/chunk-PBENCR5L.js";
@@ -9,12 +9,12 @@ import {
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  walkStripApplies,
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  walkStripFrame,
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  walkStripLabelsTree
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- } from "../chunks/chunk-UD5FOCI2.js";
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+ } from "../chunks/chunk-QMJXHYVQ.js";
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  import {
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  LABELLED_ROW_PX
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- } from "../chunks/chunk-GFRPX6M2.js";
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- import "../chunks/chunk-OXTR3BVF.js";
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- import "../chunks/chunk-BR25DGIJ.js";
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+ } from "../chunks/chunk-EPREHMKU.js";
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+ import "../chunks/chunk-QG5IVMRS.js";
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+ import "../chunks/chunk-BOHK5BD3.js";
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  import "../chunks/chunk-G2FD7S3C.js";
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  import "../chunks/chunk-7GBL7SJY.js";
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  import "../chunks/chunk-PBENCR5L.js";
@@ -4,8 +4,8 @@ import {
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  rampHue,
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  rampHueCss,
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  rampStops
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- } from "./chunks/chunk-OXTR3BVF.js";
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- import "./chunks/chunk-BR25DGIJ.js";
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+ } from "./chunks/chunk-QG5IVMRS.js";
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+ import "./chunks/chunk-BOHK5BD3.js";
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  import "./chunks/chunk-G2FD7S3C.js";
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  import "./chunks/chunk-7GBL7SJY.js";
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  import "./chunks/chunk-PBENCR5L.js";
@@ -7,8 +7,8 @@ import {
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  stripBlockAt,
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  stripOverhang,
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  stripPixels
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- } from "./chunks/chunk-CVYDR2OP.js";
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- import "./chunks/chunk-BR25DGIJ.js";
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+ } from "./chunks/chunk-373Y3KUJ.js";
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+ import "./chunks/chunk-BOHK5BD3.js";
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  import "./chunks/chunk-G2FD7S3C.js";
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  import "./chunks/chunk-7GBL7SJY.js";
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  import "./chunks/chunk-PBENCR5L.js";
@@ -11,7 +11,7 @@ import {
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  endTangent,
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  getNodeColor,
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  hslToRgb
14
- } from "../chunks/chunk-BR25DGIJ.js";
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+ } from "../chunks/chunk-BOHK5BD3.js";
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  import "../chunks/chunk-G2FD7S3C.js";
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  import "../chunks/chunk-7GBL7SJY.js";
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  import "../chunks/chunk-PBENCR5L.js";
@@ -1,7 +1,7 @@
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  import {
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  tubeMapNodeColors
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- } from "../chunks/chunk-A4MYLGKG.js";
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- import "../chunks/chunk-BR25DGIJ.js";
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+ } from "../chunks/chunk-ZBWMTXTM.js";
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+ import "../chunks/chunk-BOHK5BD3.js";
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  import "../chunks/chunk-G2FD7S3C.js";
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  import "../chunks/chunk-7GBL7SJY.js";
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  import "../chunks/chunk-PBENCR5L.js";
@@ -1 +1 @@
1
- export declare const version = "9.7.0";
1
+ export declare const version = "9.8.0";
package/dist/version.js CHANGED
@@ -1,6 +1,6 @@
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  import {
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  version
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- } from "./chunks/chunk-ESRCSSS2.js";
3
+ } from "./chunks/chunk-JEF73V3A.js";
4
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  export {
5
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  version
6
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  };
@@ -9,8 +9,8 @@ import {
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  schemeColor,
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  schemeCss,
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  schemeRgb
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- } from "./chunks/chunk-XPT66H6H.js";
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- import "./chunks/chunk-BR25DGIJ.js";
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+ } from "./chunks/chunk-AM3P3WWO.js";
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+ import "./chunks/chunk-BOHK5BD3.js";
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  import "./chunks/chunk-G2FD7S3C.js";
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  import "./chunks/chunk-7GBL7SJY.js";
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  import "./chunks/chunk-PBENCR5L.js";
@@ -2,9 +2,9 @@ import {
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  facetLifts,
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  walkHighlight,
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  walkLift
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- } from "./chunks/chunk-LFKMASER.js";
6
- import "./chunks/chunk-XPT66H6H.js";
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- import "./chunks/chunk-BR25DGIJ.js";
5
+ } from "./chunks/chunk-3FVITQAJ.js";
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+ import "./chunks/chunk-AM3P3WWO.js";
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+ import "./chunks/chunk-BOHK5BD3.js";
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  import "./chunks/chunk-G2FD7S3C.js";
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  import "./chunks/chunk-7GBL7SJY.js";
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  import "./chunks/chunk-PBENCR5L.js";
package/package.json CHANGED
@@ -1,6 +1,6 @@
1
1
  {
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2
  "name": "@jbrowse/bandage-core",
3
- "version": "9.7.0",
3
+ "version": "9.8.0",
4
4
  "description": "Pangenome graph layout and drawing with no host: GFA in, the Bandage force-directed engine and reference-anchored layouts, a Canvas2D renderer, hit testing and labels out",
5
5
  "license": "GPL-3.0-or-later",
6
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  "repository": {