@jbrowse/bandage-core 9.7.0 → 9.8.0
This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
- package/dist/chunks/{chunk-CVYDR2OP.js → chunk-373Y3KUJ.js} +1 -1
- package/dist/chunks/{chunk-LFKMASER.js → chunk-3FVITQAJ.js} +1 -1
- package/dist/chunks/{chunk-XPT66H6H.js → chunk-AM3P3WWO.js} +1 -1
- package/dist/chunks/{chunk-BR25DGIJ.js → chunk-BOHK5BD3.js} +3 -3
- package/dist/chunks/{chunk-7FARTP3U.js → chunk-CG77WIFD.js} +6 -6
- package/dist/chunks/{chunk-GFRPX6M2.js → chunk-EPREHMKU.js} +2 -2
- package/dist/chunks/{chunk-ESRCSSS2.js → chunk-JEF73V3A.js} +1 -1
- package/dist/chunks/{chunk-OXTR3BVF.js → chunk-QG5IVMRS.js} +1 -1
- package/dist/chunks/{chunk-UD5FOCI2.js → chunk-QMJXHYVQ.js} +1 -1
- package/dist/chunks/{chunk-A4MYLGKG.js → chunk-ZBWMTXTM.js} +1 -1
- package/dist/cli/figure.js +8 -8
- package/dist/figure.js +8 -8
- package/dist/index.js +10 -10
- package/dist/layout/walkRowDraw.js +3 -3
- package/dist/layout/walkStrip.js +4 -4
- package/dist/referenceRampCss.js +2 -2
- package/dist/referenceStrip.js +2 -2
- package/dist/renderer/GeometryBuilder.js +1 -1
- package/dist/tubeMap/nodeColors.js +2 -2
- package/dist/types/version.d.ts +1 -1
- package/dist/version.js +1 -1
- package/dist/walkEncoding.js +2 -2
- package/dist/walkHighlight.js +3 -3
- package/package.json +1 -1
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@@ -579,7 +579,7 @@ function buildGeometry(options) {
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};
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const edgeCurveStart = edgeCurves.length;
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const arrowStart = arrows.length;
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const laneWalks = highlight && onWalk && !ribbons ? highlight.walks : void 0;
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const laneWalks = highlight?.walks.length && onWalk && !ribbons ? highlight.walks : void 0;
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if (laneWalks) {
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const fromNode = nodeById.get(edge.from);
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const width = fromNode ? nodeWidthPx(fromNode, contigThickness, nodeWidth, depthNorm) : contigThickness;
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@@ -627,7 +627,7 @@ function buildGeometry(options) {
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buildSingleEdge(
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offset.x,
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offset.y,
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highlight && !highlight.names.has(edge.pathIds[pathIdx]) ? fadeAbgr(ribbonColor, FADED_ALPHA) : ribbonColor,
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highlight && (highlight.walks.length ? !highlight.names.has(edge.pathIds[pathIdx]) : !onWalk) ? fadeAbgr(ribbonColor, FADED_ALPHA) : ribbonColor,
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pathIdx === arrowRibbon ? edgeColor : void 0
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);
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}
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@@ -663,7 +663,7 @@ function buildGeometry(options) {
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const slots = nodePathSlots.get(nodeId);
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const slotWidth = width / pathCount;
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const drawable = segments.length >= 2;
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const lanes = highlight && !faded && !slots?.length ? highlight.walks : void 0;
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const lanes = highlight?.walks.length && !faded && !slots?.length ? highlight.walks : void 0;
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if (drawable && lanes) {
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const laneWidth = Math.max(width / lanes.length, MIN_WALK_LANE_PX);
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const normals = pointNormalsOf(segments, yToX);
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@@ -2,7 +2,7 @@ import {
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stripGeneGaps,
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walkStripFrame,
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walkStripLabelsTree
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} from "./chunk-
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} from "./chunk-QMJXHYVQ.js";
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import {
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Canvas2DRenderer
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} from "./chunk-WBCOREDZ.js";
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@@ -16,7 +16,7 @@ import {
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walkRowsKey,
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walkRowsKeyTree,
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walkRowsTree
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} from "./chunk-
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} from "./chunk-EPREHMKU.js";
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import {
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genePins
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} from "./chunk-BUBZ32IC.js";
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@@ -31,10 +31,10 @@ import {
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import {
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facetLifts,
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walkLift
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} from "./chunk-
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} from "./chunk-3FVITQAJ.js";
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import {
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encodingStops
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} from "./chunk-
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} from "./chunk-AM3P3WWO.js";
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import {
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rangeText,
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walkKey
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@@ -42,10 +42,10 @@ import {
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import {
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buildGeometry,
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computeReferenceRamp
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} from "./chunk-
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} from "./chunk-BOHK5BD3.js";
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import {
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version
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} from "./chunk-
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} from "./chunk-JEF73V3A.js";
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import {
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walkRowLabels,
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walkRowsExtent
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@@ -3,10 +3,10 @@ import {
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RAMP_GRADIENT_STOPS,
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rampHueCss,
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rampStops
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} from "./chunk-
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} from "./chunk-QG5IVMRS.js";
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import {
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REFERENCE_RAMP_ALT_CSS
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} from "./chunk-
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} from "./chunk-BOHK5BD3.js";
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import {
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LABEL_CHAR_PX
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} from "./chunk-AB35TJST.js";
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package/dist/cli/figure.js
CHANGED
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@@ -35,8 +35,8 @@ import "../chunks/chunk-LTUWJKHD.js";
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import "../chunks/chunk-WSIFAZU7.js";
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import {
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figureSvg
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} from "../chunks/chunk-
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import "../chunks/chunk-
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} from "../chunks/chunk-CG77WIFD.js";
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import "../chunks/chunk-QMJXHYVQ.js";
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import "../chunks/chunk-WBCOREDZ.js";
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import "../chunks/chunk-4BYTEJGW.js";
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import "../chunks/chunk-LOCJN3BZ.js";
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import {
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genesOnRow,
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placeRowGenes
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} from "../chunks/chunk-
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} from "../chunks/chunk-EPREHMKU.js";
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import "../chunks/chunk-BUBZ32IC.js";
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import "../chunks/chunk-3S3YVOJ7.js";
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import "../chunks/chunk-XKM5OHQQ.js";
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import "../chunks/chunk-
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import "../chunks/chunk-
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import "../chunks/chunk-3FVITQAJ.js";
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import "../chunks/chunk-AM3P3WWO.js";
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import "../chunks/chunk-2LQ5BWT7.js";
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import "../chunks/chunk-
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import "../chunks/chunk-
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import "../chunks/chunk-QG5IVMRS.js";
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import "../chunks/chunk-BOHK5BD3.js";
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import "../chunks/chunk-G2FD7S3C.js";
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import "../chunks/chunk-
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import "../chunks/chunk-JEF73V3A.js";
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import "../chunks/chunk-3C5UXR2U.js";
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import {
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filterSamples,
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package/dist/figure.js
CHANGED
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import {
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figureSvg
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} from "./chunks/chunk-
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import "./chunks/chunk-
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} from "./chunks/chunk-CG77WIFD.js";
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import "./chunks/chunk-QMJXHYVQ.js";
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import "./chunks/chunk-WBCOREDZ.js";
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import "./chunks/chunk-4BYTEJGW.js";
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import "./chunks/chunk-LOCJN3BZ.js";
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import "./chunks/chunk-47DYCZOK.js";
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import "./chunks/chunk-
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import "./chunks/chunk-EPREHMKU.js";
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import "./chunks/chunk-BUBZ32IC.js";
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import "./chunks/chunk-3S3YVOJ7.js";
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import "./chunks/chunk-XKM5OHQQ.js";
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import "./chunks/chunk-
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import "./chunks/chunk-
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import "./chunks/chunk-3FVITQAJ.js";
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import "./chunks/chunk-AM3P3WWO.js";
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import "./chunks/chunk-2LQ5BWT7.js";
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import "./chunks/chunk-
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import "./chunks/chunk-
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import "./chunks/chunk-QG5IVMRS.js";
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import "./chunks/chunk-BOHK5BD3.js";
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import "./chunks/chunk-
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import "./chunks/chunk-JEF73V3A.js";
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package/dist/index.js
CHANGED
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package/dist/layout/walkStrip.js
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package/dist/referenceRampCss.js
CHANGED
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package/dist/referenceStrip.js
CHANGED
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12
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import "./chunks/chunk-G2FD7S3C.js";
|
|
13
13
|
import "./chunks/chunk-7GBL7SJY.js";
|
|
14
14
|
import "./chunks/chunk-PBENCR5L.js";
|
|
@@ -1,7 +1,7 @@
|
|
|
1
1
|
import {
|
|
2
2
|
tubeMapNodeColors
|
|
3
|
-
} from "../chunks/chunk-
|
|
4
|
-
import "../chunks/chunk-
|
|
3
|
+
} from "../chunks/chunk-ZBWMTXTM.js";
|
|
4
|
+
import "../chunks/chunk-BOHK5BD3.js";
|
|
5
5
|
import "../chunks/chunk-G2FD7S3C.js";
|
|
6
6
|
import "../chunks/chunk-7GBL7SJY.js";
|
|
7
7
|
import "../chunks/chunk-PBENCR5L.js";
|
package/dist/types/version.d.ts
CHANGED
|
@@ -1 +1 @@
|
|
|
1
|
-
export declare const version = "9.
|
|
1
|
+
export declare const version = "9.8.0";
|
package/dist/version.js
CHANGED
package/dist/walkEncoding.js
CHANGED
|
@@ -9,8 +9,8 @@ import {
|
|
|
9
9
|
schemeColor,
|
|
10
10
|
schemeCss,
|
|
11
11
|
schemeRgb
|
|
12
|
-
} from "./chunks/chunk-
|
|
13
|
-
import "./chunks/chunk-
|
|
12
|
+
} from "./chunks/chunk-AM3P3WWO.js";
|
|
13
|
+
import "./chunks/chunk-BOHK5BD3.js";
|
|
14
14
|
import "./chunks/chunk-G2FD7S3C.js";
|
|
15
15
|
import "./chunks/chunk-7GBL7SJY.js";
|
|
16
16
|
import "./chunks/chunk-PBENCR5L.js";
|
package/dist/walkHighlight.js
CHANGED
|
@@ -2,9 +2,9 @@ import {
|
|
|
2
2
|
facetLifts,
|
|
3
3
|
walkHighlight,
|
|
4
4
|
walkLift
|
|
5
|
-
} from "./chunks/chunk-
|
|
6
|
-
import "./chunks/chunk-
|
|
7
|
-
import "./chunks/chunk-
|
|
5
|
+
} from "./chunks/chunk-3FVITQAJ.js";
|
|
6
|
+
import "./chunks/chunk-AM3P3WWO.js";
|
|
7
|
+
import "./chunks/chunk-BOHK5BD3.js";
|
|
8
8
|
import "./chunks/chunk-G2FD7S3C.js";
|
|
9
9
|
import "./chunks/chunk-7GBL7SJY.js";
|
|
10
10
|
import "./chunks/chunk-PBENCR5L.js";
|
package/package.json
CHANGED
|
@@ -1,6 +1,6 @@
|
|
|
1
1
|
{
|
|
2
2
|
"name": "@jbrowse/bandage-core",
|
|
3
|
-
"version": "9.
|
|
3
|
+
"version": "9.8.0",
|
|
4
4
|
"description": "Pangenome graph layout and drawing with no host: GFA in, the Bandage force-directed engine and reference-anchored layouts, a Canvas2D renderer, hit testing and labels out",
|
|
5
5
|
"license": "GPL-3.0-or-later",
|
|
6
6
|
"repository": {
|