@jbrowse/bandage-core 7.2.1 → 7.4.0
This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
- package/dist/chunks/{chunk-MH5IA57M.js → chunk-3LXG54PN.js} +1 -1
- package/dist/chunks/{chunk-Y7UR3MDE.js → chunk-4UBWXZVX.js} +1 -1
- package/dist/chunks/{chunk-MQSOTYVF.js → chunk-5XHORHYK.js} +43 -49
- package/dist/chunks/{chunk-2T3SRIFH.js → chunk-7G7TFATC.js} +5 -5
- package/dist/chunks/{chunk-E7FWQQHP.js → chunk-7GBL7SJY.js} +15 -4
- package/dist/chunks/{chunk-VECR253P.js → chunk-AVJK272H.js} +1 -1
- package/dist/chunks/{chunk-4FQTTG5F.js → chunk-AYOSNXLQ.js} +1 -1
- package/dist/chunks/chunk-AZFVORTC.js +19 -0
- package/dist/chunks/{chunk-JKXE6CIP.js → chunk-FRR2RGBT.js} +5 -5
- package/dist/chunks/chunk-H5S2ONCJ.js +27 -0
- package/dist/chunks/chunk-K5SIJGAE.js +12 -0
- package/dist/chunks/{chunk-CNQSHEBS.js → chunk-KEVQ46GG.js} +1 -1
- package/dist/chunks/{chunk-BZKEMAWC.js → chunk-LNSAKOXP.js} +1 -1
- package/dist/chunks/chunk-LOCJN3BZ.js +14 -0
- package/dist/chunks/{chunk-3JANT2SW.js → chunk-MP7LXLWV.js} +13 -0
- package/dist/chunks/{chunk-OY3CDWFN.js → chunk-PY7EZFL3.js} +4 -4
- package/dist/chunks/{chunk-VST5SR4C.js → chunk-RCWYY6XA.js} +4 -4
- package/dist/chunks/{chunk-EXSXBIMH.js → chunk-UJ6GYL6T.js} +1 -1
- package/dist/chunks/{chunk-EPWYRSHH.js → chunk-WZATPZNH.js} +30 -8
- package/dist/chunks/chunk-XVSBZ4ZW.js +54 -0
- package/dist/chunks/{chunk-TQ7VCGJR.js → chunk-ZNMHIPUZ.js} +1 -1
- package/dist/cli/figure.js +60 -70
- package/dist/figure.js +28 -27
- package/dist/figureSettings.js +25 -0
- package/dist/hoverText.js +8 -0
- package/dist/index.js +153 -121
- package/dist/layout/forceCache.js +23 -0
- package/dist/layout/tubeMapLayout.js +4 -4
- package/dist/layout/walkRowDraw.js +8 -8
- package/dist/layout/walkRowLayout.js +4 -2
- package/dist/layout/walkStrip.js +9 -9
- package/dist/layoutModes.js +9 -9
- package/dist/layoutQualities.js +6 -0
- package/dist/pathColors.js +7 -5
- package/dist/pipeline.js +8 -4
- package/dist/referenceRampCss.js +6 -6
- package/dist/referenceStrip.js +6 -6
- package/dist/renderer/GeometryBuilder.js +5 -5
- package/dist/renderer/geometryInputs.js +6 -0
- package/dist/tubeMap/coarsen.js +5 -5
- package/dist/tubeMap/nodeColors.js +6 -6
- package/dist/types/figure.d.ts +1 -0
- package/dist/types/figureSettings.d.ts +15 -0
- package/dist/types/hoverText.d.ts +17 -0
- package/dist/types/index.d.ts +11 -2
- package/dist/types/layout/forceCache.d.ts +11 -0
- package/dist/types/layout/walkRowLayout.d.ts +2 -1
- package/dist/types/layoutQualities.d.ts +17 -0
- package/dist/types/pathColors.d.ts +4 -0
- package/dist/types/pipeline.d.ts +2 -0
- package/dist/types/renderer/geometryInputs.d.ts +11 -0
- package/dist/types/version.d.ts +1 -1
- package/dist/version.js +1 -1
- package/dist/viewport.js +5 -5
- package/dist/walkEncoding.js +6 -6
- package/dist/walkHighlight.js +7 -7
- package/package.json +1 -1
package/dist/index.js
CHANGED
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@@ -1,12 +1,6 @@
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import {
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wheelZoomFactor
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} from "./chunks/chunk-TDQLINVI.js";
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import {
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connectorAt,
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drawTubeMapConnectors,
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referenceNodes,
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tubeMapConnectors
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} from "./chunks/chunk-GQ2AOHU4.js";
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import {
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drawTubeMap,
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tubeMapPicture
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tubeMapFrame,
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tubeMapNodeAt
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} from "./chunks/chunk-VZQ4FKLR.js";
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import {
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referenceKnots,
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warpX
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} from "./chunks/chunk-KQFOCDFY.js";
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import {
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drawTubeMapGenes,
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tubeMapGenes
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import "./chunks/chunk-EJ5OZTCK.js";
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import {
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tubeMapNodeColors
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} from "./chunks/chunk-
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} from "./chunks/chunk-KEVQ46GG.js";
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import {
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referenceKnots,
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warpX
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} from "./chunks/chunk-KQFOCDFY.js";
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import {
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drawTubeMapRuler,
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referenceBoxes,
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rulerBoxes,
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tubeX
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} from "./chunks/chunk-DRA7733Q.js";
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import {
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connectorAt,
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drawTubeMapConnectors,
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referenceNodes,
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tubeMapConnectors
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} from "./chunks/chunk-GQ2AOHU4.js";
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import {
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createForceLayoutCache
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} from "./chunks/chunk-XVSBZ4ZW.js";
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import {
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bubbleSubgraph
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} from "./chunks/chunk-VHW7FDHU.js";
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import {
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genesFromBed,
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genesFromGff3Lines,
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genesFromText,
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mergeOverlappingByName
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} from "./chunks/chunk-BXEPA4KS.js";
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import {
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bubbleHalos
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} from "./chunks/chunk-ISEI2FH3.js";
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classifyBubble
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} from "./chunks/chunk-WOO7QYKB.js";
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import "./chunks/chunk-MFKORG3F.js";
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import {
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bubbleSubgraph
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} from "./chunks/chunk-VHW7FDHU.js";
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import {
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genesFromBed,
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genesFromGff3Lines,
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genesFromText,
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mergeOverlappingByName
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} from "./chunks/chunk-BXEPA4KS.js";
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import {
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REFERENCE_STRIP_ZONE_PX,
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drawReferenceStrip,
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referenceStripBlocks,
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stripBlockAt
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} from "./chunks/chunk-
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import {
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LAYOUT_ENGINES,
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layoutEngine
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} from "./chunks/chunk-6EJIU6IA.js";
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import {
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stressLayout
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} from "./chunks/chunk-UNOE2NDN.js";
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import "./chunks/chunk-LYJ4US66.js";
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} from "./chunks/chunk-UJ6GYL6T.js";
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import {
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FORCE_LAYOUT_LABEL,
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LAYOUT_MODES,
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layoutModeByValue,
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modeUsesLayoutEngine
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} from "./chunks/chunk-
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import "./chunks/chunk-4FQTTG5F.js";
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import "./chunks/chunk-TEDQJPMI.js";
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} from "./chunks/chunk-FRR2RGBT.js";
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import "./chunks/chunk-LOEA5IHZ.js";
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import "./chunks/chunk-AYOSNXLQ.js";
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import "./chunks/chunk-TEDQJPMI.js";
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import "./chunks/chunk-L3O7AWLI.js";
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import "./chunks/chunk-TZFWUT2C.js";
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import "./chunks/chunk-C44YRP5F.js";
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import "./chunks/chunk-RVS2QCOX.js";
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import "./chunks/chunk-HNQPEMYE.js";
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import
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import {
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LAYOUT_QUALITIES
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} from "./chunks/chunk-K5SIJGAE.js";
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import {
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cutGbzRegion,
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openGbz,
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parseRegion
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} from "./chunks/chunk-73RSLGZT.js";
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import {
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cutWindowGFA,
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referencePathQuery,
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referenceSamplesOf,
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resolveReferenceSample
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} from "./chunks/chunk-LTUWJKHD.js";
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import "./chunks/chunk-WSIFAZU7.js";
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import {
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edgeHoverText,
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regionLabel
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} from "./chunks/chunk-AZFVORTC.js";
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import {
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LAYOUT_ENGINES,
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layoutEngine
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} from "./chunks/chunk-6EJIU6IA.js";
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import "./chunks/chunk-LYJ4US66.js";
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walkRows
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} from "./chunks/chunk-7GBL7SJY.js";
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import {
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|
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|
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|
|
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1
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import {
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|
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3
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walkRowLayout,
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|
walkRowsExtent
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|
package/dist/layout/walkStrip.js
CHANGED
|
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walkMarksTree,
|
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|
+
import "../chunks/chunk-ES2N6V56.js";
|
|
24
|
+
import "../chunks/chunk-ST2IBUAN.js";
|
|
25
|
+
import "../chunks/chunk-BPLIXMH7.js";
|
|
24
26
|
import "../chunks/chunk-TAMCZHLW.js";
|
|
25
27
|
import "../chunks/chunk-N6FECAXP.js";
|
|
26
28
|
import "../chunks/chunk-2CVHXFK7.js";
|
|
27
29
|
import "../chunks/chunk-CPMHA4W5.js";
|
|
28
|
-
import "../chunks/chunk-NNODIW4U.js";
|
|
29
|
-
import "../chunks/chunk-BPLIXMH7.js";
|
|
30
30
|
import "../chunks/chunk-FYQWPEEY.js";
|
|
31
31
|
export {
|
|
32
32
|
LABELLED_ROW_PX,
|
package/dist/layoutModes.js
CHANGED
|
@@ -4,27 +4,27 @@ import {
|
|
|
4
4
|
LAYOUT_MODE_VALUES,
|
|
5
5
|
layoutModeByValue,
|
|
6
6
|
modeUsesLayoutEngine
|
|
7
|
-
} from "./chunks/chunk-
|
|
8
|
-
import "./chunks/chunk-4FQTTG5F.js";
|
|
9
|
-
import "./chunks/chunk-TEDQJPMI.js";
|
|
7
|
+
} from "./chunks/chunk-FRR2RGBT.js";
|
|
10
8
|
import "./chunks/chunk-LOEA5IHZ.js";
|
|
9
|
+
import "./chunks/chunk-AYOSNXLQ.js";
|
|
10
|
+
import "./chunks/chunk-TEDQJPMI.js";
|
|
11
11
|
import "./chunks/chunk-L3O7AWLI.js";
|
|
12
12
|
import "./chunks/chunk-TZFWUT2C.js";
|
|
13
|
+
import "./chunks/chunk-C44YRP5F.js";
|
|
13
14
|
import "./chunks/chunk-RVS2QCOX.js";
|
|
14
15
|
import "./chunks/chunk-HNQPEMYE.js";
|
|
15
|
-
import "./chunks/chunk-
|
|
16
|
-
import "./chunks/chunk-3JANT2SW.js";
|
|
16
|
+
import "./chunks/chunk-MP7LXLWV.js";
|
|
17
17
|
import "./chunks/chunk-SZNZ2T6D.js";
|
|
18
|
-
import "./chunks/chunk-
|
|
19
|
-
import "./chunks/chunk-ES2N6V56.js";
|
|
20
|
-
import "./chunks/chunk-ST2IBUAN.js";
|
|
18
|
+
import "./chunks/chunk-7GBL7SJY.js";
|
|
21
19
|
import "./chunks/chunk-3ZZSX5HN.js";
|
|
22
20
|
import "./chunks/chunk-AB35TJST.js";
|
|
21
|
+
import "./chunks/chunk-ES2N6V56.js";
|
|
22
|
+
import "./chunks/chunk-ST2IBUAN.js";
|
|
23
|
+
import "./chunks/chunk-BPLIXMH7.js";
|
|
23
24
|
import "./chunks/chunk-TAMCZHLW.js";
|
|
24
25
|
import "./chunks/chunk-N6FECAXP.js";
|
|
25
26
|
import "./chunks/chunk-2CVHXFK7.js";
|
|
26
27
|
import "./chunks/chunk-CPMHA4W5.js";
|
|
27
|
-
import "./chunks/chunk-BPLIXMH7.js";
|
|
28
28
|
import "./chunks/chunk-FYQWPEEY.js";
|
|
29
29
|
export {
|
|
30
30
|
FORCE_LAYOUT_LABEL,
|
package/dist/pathColors.js
CHANGED
|
@@ -7,16 +7,17 @@ import {
|
|
|
7
7
|
pathCssColor,
|
|
8
8
|
pathGreyCssColor,
|
|
9
9
|
pathHueAt,
|
|
10
|
-
pathLegend
|
|
11
|
-
|
|
12
|
-
|
|
10
|
+
pathLegend,
|
|
11
|
+
walkLabelsOf
|
|
12
|
+
} from "./chunks/chunk-7GBL7SJY.js";
|
|
13
13
|
import "./chunks/chunk-3ZZSX5HN.js";
|
|
14
14
|
import "./chunks/chunk-AB35TJST.js";
|
|
15
|
+
import "./chunks/chunk-ST2IBUAN.js";
|
|
16
|
+
import "./chunks/chunk-BPLIXMH7.js";
|
|
15
17
|
import "./chunks/chunk-TAMCZHLW.js";
|
|
16
18
|
import "./chunks/chunk-N6FECAXP.js";
|
|
17
19
|
import "./chunks/chunk-2CVHXFK7.js";
|
|
18
20
|
import "./chunks/chunk-CPMHA4W5.js";
|
|
19
|
-
import "./chunks/chunk-BPLIXMH7.js";
|
|
20
21
|
import "./chunks/chunk-FYQWPEEY.js";
|
|
21
22
|
export {
|
|
22
23
|
MAX_PATH_COLORS,
|
|
@@ -27,5 +28,6 @@ export {
|
|
|
27
28
|
pathCssColor,
|
|
28
29
|
pathGreyCssColor,
|
|
29
30
|
pathHueAt,
|
|
30
|
-
pathLegend
|
|
31
|
+
pathLegend,
|
|
32
|
+
walkLabelsOf
|
|
31
33
|
};
|