@jbrowse/bandage-core 6.1.1 → 7.0.0

This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
Files changed (67) hide show
  1. package/dist/chunks/{chunk-GOY6REMT.js → chunk-2LQ5BWT7.js} +1 -1
  2. package/dist/chunks/{chunk-N62KBLFC.js → chunk-3ZZSX5HN.js} +1 -1
  3. package/dist/chunks/{chunk-R6ZUK4Y3.js → chunk-4FQTTG5F.js} +1 -1
  4. package/dist/chunks/{chunk-7UIMNBJT.js → chunk-6UFS3EWI.js} +6 -5
  5. package/dist/chunks/{chunk-OSDI57GY.js → chunk-7PWMTUAK.js} +27 -24
  6. package/dist/chunks/{chunk-XJWN753L.js → chunk-AWCMVPVP.js} +1 -1
  7. package/dist/chunks/{chunk-ZZA2AFB4.js → chunk-CNQSHEBS.js} +1 -1
  8. package/dist/chunks/{chunk-CS3E4ETM.js → chunk-DRA7733Q.js} +1 -1
  9. package/dist/chunks/{chunk-X5L37W4J.js → chunk-E7FWQQHP.js} +1 -1
  10. package/dist/chunks/{chunk-XH43CLO2.js → chunk-EOSVRILX.js} +1 -1
  11. package/dist/chunks/{chunk-SMQ545MU.js → chunk-EXSXBIMH.js} +1 -1
  12. package/dist/chunks/{chunk-YMSSF2RK.js → chunk-FP4H7SFT.js} +1 -1
  13. package/dist/chunks/{chunk-DKOB2OPC.js → chunk-GJMC3PGM.js} +3 -3
  14. package/dist/chunks/{chunk-PJESIRDU.js → chunk-JFNPL4UT.js} +2 -2
  15. package/dist/chunks/chunk-L53SXJZI.js +22 -0
  16. package/dist/chunks/{chunk-ZKGM7VLA.js → chunk-MH5IA57M.js} +1 -1
  17. package/dist/chunks/{chunk-MREQ7GIA.js → chunk-MLSWIMZO.js} +1 -1
  18. package/dist/chunks/{chunk-V5BPIOLS.js → chunk-MZ7QQRUJ.js} +1 -1
  19. package/dist/chunks/{chunk-4EMPBO7S.js → chunk-N6FECAXP.js} +51 -1
  20. package/dist/chunks/chunk-O4TGF4WS.js +503 -0
  21. package/dist/chunks/{chunk-CTSBC2O6.js → chunk-OWFPAIJI.js} +1 -1
  22. package/dist/chunks/{chunk-X4VVPLI5.js → chunk-TQ7VCGJR.js} +1 -1
  23. package/dist/chunks/{chunk-ZHCDYSA5.js → chunk-VECR253P.js} +1 -1
  24. package/dist/chunks/{chunk-RX5CSWJW.js → chunk-VST5SR4C.js} +6 -6
  25. package/dist/chunks/{chunk-T43W7NKK.js → chunk-WEMKWLDF.js} +1 -1
  26. package/dist/chunks/{chunk-Y3IOTZJA.js → chunk-WFB5TXRA.js} +1 -1
  27. package/dist/chunks/{chunk-STNG3Y5X.js → chunk-YZ5CCEDH.js} +0 -30
  28. package/dist/cli/figure.js +33 -36
  29. package/dist/deletionEdges.js +5 -1
  30. package/dist/figure.js +22 -22
  31. package/dist/graphLabels.js +2 -2
  32. package/dist/index.js +59 -47
  33. package/dist/labelLayout.js +6 -6
  34. package/dist/layout/deletionRoutes.js +1 -3
  35. package/dist/layout/stressEngine.js +11 -0
  36. package/dist/layout/tubeMapLayout.js +4 -4
  37. package/dist/layout/walkRowDraw.js +9 -9
  38. package/dist/layout/walkStrip.js +10 -10
  39. package/dist/layoutEngines.js +9 -0
  40. package/dist/layoutModes.js +7 -7
  41. package/dist/pathColors.js +3 -3
  42. package/dist/pipeline.js +4 -4
  43. package/dist/referenceRampCss.js +8 -8
  44. package/dist/referenceStrip.js +8 -8
  45. package/dist/renderer/GeometryBuilder.js +7 -7
  46. package/dist/tubeMap/axis.js +3 -3
  47. package/dist/tubeMap/coarsen.js +4 -4
  48. package/dist/tubeMap/genes.js +4 -4
  49. package/dist/tubeMap/nodeColors.js +8 -8
  50. package/dist/types/cli/figure.d.ts +2 -0
  51. package/dist/types/deletionEdges.d.ts +7 -0
  52. package/dist/types/index.d.ts +5 -2
  53. package/dist/types/labelLayout.d.ts +0 -1
  54. package/dist/types/layout/deletionRoutes.d.ts +0 -1
  55. package/dist/types/layout/stressEngine.d.ts +19 -0
  56. package/dist/types/layoutEngines.d.ts +2 -0
  57. package/dist/types/pipeline.d.ts +2 -0
  58. package/dist/types/version.d.ts +1 -1
  59. package/dist/util/SpatialIndex.js +3 -3
  60. package/dist/util/edgeCurves.js +2 -2
  61. package/dist/util/hitDetection.js +4 -4
  62. package/dist/version.js +1 -1
  63. package/dist/viewport.js +5 -5
  64. package/dist/walkEncoding.js +8 -8
  65. package/dist/walkHighlight.js +9 -9
  66. package/dist/walkKey.js +3 -3
  67. package/package.json +1 -1
@@ -4,72 +4,74 @@ import {
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  genesFromGff3Lines,
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  genesFromText
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  } from "../chunks/chunk-BXEPA4KS.js";
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+ import {
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+ layoutEngine
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+ } from "../chunks/chunk-L53SXJZI.js";
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+ import "../chunks/chunk-O4TGF4WS.js";
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  import {
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  LAYOUT_MODES,
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  layoutModeByValue
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- } from "../chunks/chunk-T43W7NKK.js";
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- import "../chunks/chunk-R6ZUK4Y3.js";
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+ } from "../chunks/chunk-WEMKWLDF.js";
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+ import "../chunks/chunk-4FQTTG5F.js";
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  import "../chunks/chunk-TEDQJPMI.js";
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  import "../chunks/chunk-LOEA5IHZ.js";
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  import "../chunks/chunk-L3O7AWLI.js";
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  import "../chunks/chunk-TZFWUT2C.js";
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+ import "../chunks/chunk-RVS2QCOX.js";
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  import "../chunks/chunk-HNQPEMYE.js";
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  import "../chunks/chunk-C44YRP5F.js";
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- import "../chunks/chunk-RVS2QCOX.js";
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- import {
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- loadBandage
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- } from "../chunks/chunk-7XHHVYG7.js";
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+ import "../chunks/chunk-7XHHVYG7.js";
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  import {
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  figureSvg
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- } from "../chunks/chunk-OSDI57GY.js";
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+ } from "../chunks/chunk-7PWMTUAK.js";
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  import "../chunks/chunk-47DYCZOK.js";
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- import "../chunks/chunk-V5BPIOLS.js";
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+ import "../chunks/chunk-MZ7QQRUJ.js";
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  import {
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  genesOnRow,
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  placeRowGenes
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- } from "../chunks/chunk-PJESIRDU.js";
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+ } from "../chunks/chunk-JFNPL4UT.js";
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  import "../chunks/chunk-CH3DLBUT.js";
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  import "../chunks/chunk-4BYTEJGW.js";
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- import "../chunks/chunk-BUBZ32IC.js";
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  import "../chunks/chunk-3S3YVOJ7.js";
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- import "../chunks/chunk-XH43CLO2.js";
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- import "../chunks/chunk-XJWN753L.js";
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- import "../chunks/chunk-ZKGM7VLA.js";
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- import "../chunks/chunk-X4VVPLI5.js";
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- import "../chunks/chunk-GOY6REMT.js";
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+ import "../chunks/chunk-BUBZ32IC.js";
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+ import "../chunks/chunk-EOSVRILX.js";
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+ import "../chunks/chunk-AWCMVPVP.js";
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+ import "../chunks/chunk-MH5IA57M.js";
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+ import "../chunks/chunk-TQ7VCGJR.js";
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+ import "../chunks/chunk-2LQ5BWT7.js";
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  import {
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  forceLayout,
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  loadGraph
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- } from "../chunks/chunk-7UIMNBJT.js";
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+ } from "../chunks/chunk-6UFS3EWI.js";
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  import "../chunks/chunk-PUG7LXDF.js";
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  import "../chunks/chunk-IGVV37VI.js";
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  import "../chunks/chunk-72N5DJHZ.js";
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  import "../chunks/chunk-QYBZZI5H.js";
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  import "../chunks/chunk-CDLPYR5O.js";
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- import "../chunks/chunk-STNG3Y5X.js";
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- import "../chunks/chunk-ZHCDYSA5.js";
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- import "../chunks/chunk-RX5CSWJW.js";
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+ import "../chunks/chunk-YZ5CCEDH.js";
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+ import "../chunks/chunk-VECR253P.js";
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+ import "../chunks/chunk-VST5SR4C.js";
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  import "../chunks/chunk-UMNCCYBN.js";
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- import "../chunks/chunk-DKOB2OPC.js";
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- import "../chunks/chunk-YMSSF2RK.js";
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- import "../chunks/chunk-MREQ7GIA.js";
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- import "../chunks/chunk-Y3IOTZJA.js";
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+ import "../chunks/chunk-PBENCR5L.js";
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+ import "../chunks/chunk-GJMC3PGM.js";
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+ import "../chunks/chunk-FP4H7SFT.js";
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+ import "../chunks/chunk-MLSWIMZO.js";
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+ import "../chunks/chunk-WFB5TXRA.js";
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  import "../chunks/chunk-EZPBJPK6.js";
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  import {
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  filterSamples,
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  walkRows
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  } from "../chunks/chunk-SZNZ2T6D.js";
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- import "../chunks/chunk-X5L37W4J.js";
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- import "../chunks/chunk-ST2IBUAN.js";
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+ import "../chunks/chunk-E7FWQQHP.js";
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  import "../chunks/chunk-ES2N6V56.js";
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- import "../chunks/chunk-N62KBLFC.js";
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+ import "../chunks/chunk-ST2IBUAN.js";
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+ import "../chunks/chunk-3ZZSX5HN.js";
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  import "../chunks/chunk-AB35TJST.js";
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  import "../chunks/chunk-TAMCZHLW.js";
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- import "../chunks/chunk-PBENCR5L.js";
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  import "../chunks/chunk-UVBGRJQX.js";
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  import "../chunks/chunk-6JEWNXCQ.js";
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  import "../chunks/chunk-JKJWSY4V.js";
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- import "../chunks/chunk-4EMPBO7S.js";
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+ import "../chunks/chunk-N6FECAXP.js";
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  import "../chunks/chunk-2CVHXFK7.js";
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  import "../chunks/chunk-CPMHA4W5.js";
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  import "../chunks/chunk-NNODIW4U.js";
@@ -178,12 +180,6 @@ async function indexedGenes(file, index, format, contigs, bind) {
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  features: format === "gff3" ? genesFromGff3Lines(lines) : genesFromBed(lines.join("\n"))
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  };
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  }
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- var engine = async (request) => {
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- const bandage = await loadBandage();
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- const start = performance.now();
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- const result = bandage.computeLayout(request.graph, request.options);
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- return { result, duration: performance.now() - start };
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- };
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  async function exists(location) {
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  try {
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  await (isUrl(location) ? fetchOk(location, { method: "HEAD" }) : access(location));
@@ -240,11 +236,12 @@ async function renderSpec(spec, base) {
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  quality: spec.quality ?? 2,
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  linearLayout: false,
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  bubbleSpread: spec.bubbleSpread ?? "auto",
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+ engine: spec.engine,
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  spacing: spec.spacing,
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  componentSeparation: spec.componentSeparation,
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- showDeletionEdges: !!spec.showDeletionEdges
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+ showDeletionEdges: spec.showDeletionEdges
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  },
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- engine
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+ layoutEngine
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  )).result;
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  const bars = spec.walkStrip ? walkRows(graph, source.region) : void 0;
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  const stripRows = bars && {
@@ -1,13 +1,17 @@
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  import {
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  bypassedPoints,
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+ closableDeletions,
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  deletionArcCurves,
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+ deletionDrawing,
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  deletionEdges
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- } from "./chunks/chunk-4EMPBO7S.js";
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+ } from "./chunks/chunk-N6FECAXP.js";
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  import "./chunks/chunk-2CVHXFK7.js";
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  import "./chunks/chunk-CPMHA4W5.js";
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  import "./chunks/chunk-FYQWPEEY.js";
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  export {
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  bypassedPoints,
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+ closableDeletions,
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  deletionArcCurves,
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+ deletionDrawing,
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  deletionEdges
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  };
package/dist/figure.js CHANGED
@@ -1,45 +1,45 @@
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  import {
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  figureSvg
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- } from "./chunks/chunk-OSDI57GY.js";
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+ } from "./chunks/chunk-7PWMTUAK.js";
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  import "./chunks/chunk-47DYCZOK.js";
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- import "./chunks/chunk-V5BPIOLS.js";
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- import "./chunks/chunk-PJESIRDU.js";
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+ import "./chunks/chunk-MZ7QQRUJ.js";
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+ import "./chunks/chunk-JFNPL4UT.js";
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  import "./chunks/chunk-CH3DLBUT.js";
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  import "./chunks/chunk-4BYTEJGW.js";
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- import "./chunks/chunk-BUBZ32IC.js";
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  import "./chunks/chunk-3S3YVOJ7.js";
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- import "./chunks/chunk-XH43CLO2.js";
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- import "./chunks/chunk-XJWN753L.js";
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- import "./chunks/chunk-ZKGM7VLA.js";
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- import "./chunks/chunk-X4VVPLI5.js";
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- import "./chunks/chunk-GOY6REMT.js";
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- import "./chunks/chunk-7UIMNBJT.js";
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+ import "./chunks/chunk-BUBZ32IC.js";
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+ import "./chunks/chunk-EOSVRILX.js";
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+ import "./chunks/chunk-AWCMVPVP.js";
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+ import "./chunks/chunk-MH5IA57M.js";
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+ import "./chunks/chunk-TQ7VCGJR.js";
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+ import "./chunks/chunk-2LQ5BWT7.js";
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+ import "./chunks/chunk-6UFS3EWI.js";
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  import "./chunks/chunk-PUG7LXDF.js";
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  import "./chunks/chunk-IGVV37VI.js";
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  import "./chunks/chunk-72N5DJHZ.js";
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  import "./chunks/chunk-QYBZZI5H.js";
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  import "./chunks/chunk-CDLPYR5O.js";
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- import "./chunks/chunk-STNG3Y5X.js";
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- import "./chunks/chunk-ZHCDYSA5.js";
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- import "./chunks/chunk-RX5CSWJW.js";
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+ import "./chunks/chunk-YZ5CCEDH.js";
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+ import "./chunks/chunk-VECR253P.js";
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+ import "./chunks/chunk-VST5SR4C.js";
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  import "./chunks/chunk-UMNCCYBN.js";
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- import "./chunks/chunk-DKOB2OPC.js";
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- import "./chunks/chunk-YMSSF2RK.js";
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- import "./chunks/chunk-MREQ7GIA.js";
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- import "./chunks/chunk-Y3IOTZJA.js";
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+ import "./chunks/chunk-PBENCR5L.js";
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+ import "./chunks/chunk-GJMC3PGM.js";
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+ import "./chunks/chunk-FP4H7SFT.js";
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+ import "./chunks/chunk-MLSWIMZO.js";
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+ import "./chunks/chunk-WFB5TXRA.js";
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  import "./chunks/chunk-EZPBJPK6.js";
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  import "./chunks/chunk-SZNZ2T6D.js";
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- import "./chunks/chunk-X5L37W4J.js";
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- import "./chunks/chunk-ST2IBUAN.js";
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+ import "./chunks/chunk-E7FWQQHP.js";
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  import "./chunks/chunk-ES2N6V56.js";
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- import "./chunks/chunk-N62KBLFC.js";
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+ import "./chunks/chunk-ST2IBUAN.js";
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+ import "./chunks/chunk-3ZZSX5HN.js";
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  import "./chunks/chunk-AB35TJST.js";
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  import "./chunks/chunk-TAMCZHLW.js";
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- import "./chunks/chunk-PBENCR5L.js";
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  import "./chunks/chunk-UVBGRJQX.js";
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  import "./chunks/chunk-6JEWNXCQ.js";
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  import "./chunks/chunk-JKJWSY4V.js";
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- import "./chunks/chunk-4EMPBO7S.js";
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+ import "./chunks/chunk-N6FECAXP.js";
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  import "./chunks/chunk-2CVHXFK7.js";
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  import "./chunks/chunk-CPMHA4W5.js";
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  import "./chunks/chunk-NNODIW4U.js";
@@ -6,10 +6,10 @@ import {
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  placeSizeLabels,
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  rowLabelBox,
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  sizeLabelCandidates
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- } from "./chunks/chunk-N62KBLFC.js";
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+ } from "./chunks/chunk-3ZZSX5HN.js";
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  import "./chunks/chunk-AB35TJST.js";
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  import "./chunks/chunk-TAMCZHLW.js";
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- import "./chunks/chunk-4EMPBO7S.js";
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+ import "./chunks/chunk-N6FECAXP.js";
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  import "./chunks/chunk-2CVHXFK7.js";
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  import "./chunks/chunk-CPMHA4W5.js";
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  import "./chunks/chunk-FYQWPEEY.js";
package/dist/index.js CHANGED
@@ -1,6 +1,12 @@
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  import {
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  wheelZoomFactor
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  } from "./chunks/chunk-TDQLINVI.js";
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+ import {
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+ connectorAt,
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+ drawTubeMapConnectors,
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+ referenceNodes,
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+ tubeMapConnectors
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+ } from "./chunks/chunk-GQ2AOHU4.js";
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  import {
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  drawTubeMap,
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  tubeMapPicture
@@ -9,30 +15,24 @@ import {
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  tubeMapFrame,
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  tubeMapNodeAt
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  } from "./chunks/chunk-VZQ4FKLR.js";
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+ import {
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+ referenceKnots,
20
+ warpX
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+ } from "./chunks/chunk-KQFOCDFY.js";
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  import {
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  drawTubeMapGenes,
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  tubeMapGenes
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- } from "./chunks/chunk-CTSBC2O6.js";
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+ } from "./chunks/chunk-OWFPAIJI.js";
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  import "./chunks/chunk-EJ5OZTCK.js";
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  import {
18
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  tubeMapNodeColors
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- } from "./chunks/chunk-ZZA2AFB4.js";
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- import {
21
- referenceKnots,
22
- warpX
23
- } from "./chunks/chunk-KQFOCDFY.js";
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+ } from "./chunks/chunk-CNQSHEBS.js";
24
30
  import {
25
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  drawTubeMapRuler,
26
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  referenceBoxes,
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  rulerBoxes,
28
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  tubeX
29
- } from "./chunks/chunk-CS3E4ETM.js";
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- import {
31
- connectorAt,
32
- drawTubeMapConnectors,
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- referenceNodes,
34
- tubeMapConnectors
35
- } from "./chunks/chunk-GQ2AOHU4.js";
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+ } from "./chunks/chunk-DRA7733Q.js";
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  import {
37
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  bubbleHalos
38
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  } from "./chunks/chunk-ISEI2FH3.js";
@@ -60,27 +60,34 @@ import {
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60
  drawReferenceStrip,
61
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  referenceStripBlocks,
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  stripBlockAt
63
- } from "./chunks/chunk-SMQ545MU.js";
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+ } from "./chunks/chunk-EXSXBIMH.js";
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+ import {
65
+ layoutEngine
66
+ } from "./chunks/chunk-L53SXJZI.js";
67
+ import {
68
+ LAYOUT_ENGINES,
69
+ stressLayout
70
+ } from "./chunks/chunk-O4TGF4WS.js";
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  import {
65
72
  FORCE_LAYOUT_LABEL,
66
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  LAYOUT_MODES,
67
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  layoutModeByValue,
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  modeUsesLayoutEngine
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- } from "./chunks/chunk-T43W7NKK.js";
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- import "./chunks/chunk-R6ZUK4Y3.js";
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+ } from "./chunks/chunk-WEMKWLDF.js";
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+ import "./chunks/chunk-4FQTTG5F.js";
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  import "./chunks/chunk-TEDQJPMI.js";
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  import "./chunks/chunk-LOEA5IHZ.js";
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  import "./chunks/chunk-L3O7AWLI.js";
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  import "./chunks/chunk-TZFWUT2C.js";
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+ import "./chunks/chunk-RVS2QCOX.js";
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  import "./chunks/chunk-HNQPEMYE.js";
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  import "./chunks/chunk-C44YRP5F.js";
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- import "./chunks/chunk-RVS2QCOX.js";
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  import {
79
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  loadBandage
80
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  } from "./chunks/chunk-7XHHVYG7.js";
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  import {
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  figureSvg
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- } from "./chunks/chunk-OSDI57GY.js";
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+ } from "./chunks/chunk-7PWMTUAK.js";
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  import {
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  svgCanvas
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  } from "./chunks/chunk-47DYCZOK.js";
@@ -94,7 +101,7 @@ import {
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  walkMarksTree,
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  walkStripFrame,
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  walkStripLabelsTree
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- } from "./chunks/chunk-V5BPIOLS.js";
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+ } from "./chunks/chunk-MZ7QQRUJ.js";
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  import {
99
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  BAR_PX,
100
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  DISAGREES,
@@ -116,24 +123,24 @@ import {
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  walkRowsKey,
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  walkRowsKeyTree,
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  walkRowsTree
119
- } from "./chunks/chunk-PJESIRDU.js";
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+ } from "./chunks/chunk-JFNPL4UT.js";
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  import {
121
128
  Canvas2DRenderer
122
129
  } from "./chunks/chunk-CH3DLBUT.js";
123
130
  import {
124
131
  getDpr
125
132
  } from "./chunks/chunk-4BYTEJGW.js";
126
- import {
127
- genePins
128
- } from "./chunks/chunk-BUBZ32IC.js";
129
133
  import {
130
134
  EXON_COLOR,
131
135
  exonOutlineTree,
132
136
  exonStretches
133
137
  } from "./chunks/chunk-3S3YVOJ7.js";
138
+ import {
139
+ genePins
140
+ } from "./chunks/chunk-BUBZ32IC.js";
134
141
  import {
135
142
  version
136
- } from "./chunks/chunk-XH43CLO2.js";
143
+ } from "./chunks/chunk-EOSVRILX.js";
137
144
  import {
138
145
  axisScaleOf,
139
146
  contains,
@@ -141,12 +148,12 @@ import {
141
148
  screenToLayout,
142
149
  viewportOf,
143
150
  zoomAbout
144
- } from "./chunks/chunk-XJWN753L.js";
151
+ } from "./chunks/chunk-AWCMVPVP.js";
145
152
  import {
146
153
  facetLifts,
147
154
  walkHighlight,
148
155
  walkLift
149
- } from "./chunks/chunk-ZKGM7VLA.js";
156
+ } from "./chunks/chunk-MH5IA57M.js";
150
157
  import {
151
158
  WALK_FIELDS,
152
159
  WALK_SCHEMES,
@@ -154,12 +161,12 @@ import {
154
161
  encodingSwatchCss,
155
162
  resolveEncoding,
156
163
  schemeCss
157
- } from "./chunks/chunk-X4VVPLI5.js";
164
+ } from "./chunks/chunk-TQ7VCGJR.js";
158
165
  import {
159
166
  rangeText,
160
167
  walkKey,
161
168
  walkPosition
162
- } from "./chunks/chunk-GOY6REMT.js";
169
+ } from "./chunks/chunk-2LQ5BWT7.js";
163
170
  import {
164
171
  FIT_PADDING,
165
172
  clampZoom,
@@ -170,37 +177,44 @@ import {
170
177
  forceLayout,
171
178
  layoutExtent,
172
179
  loadGraph
173
- } from "./chunks/chunk-7UIMNBJT.js";
180
+ } from "./chunks/chunk-6UFS3EWI.js";
174
181
  import "./chunks/chunk-PUG7LXDF.js";
175
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  import "./chunks/chunk-IGVV37VI.js";
176
183
  import "./chunks/chunk-72N5DJHZ.js";
177
184
  import "./chunks/chunk-QYBZZI5H.js";
178
185
  import "./chunks/chunk-CDLPYR5O.js";
179
- import "./chunks/chunk-STNG3Y5X.js";
186
+ import "./chunks/chunk-YZ5CCEDH.js";
180
187
  import {
181
188
  RAMP_GRADIENT_CSS,
182
189
  rampHue,
183
190
  rampHueCss,
184
191
  rampStops
185
- } from "./chunks/chunk-ZHCDYSA5.js";
192
+ } from "./chunks/chunk-VECR253P.js";
186
193
  import {
187
194
  REFERENCE_RAMP_MAX_HUE,
188
195
  buildGeometry,
189
196
  computeReferenceRamp
190
- } from "./chunks/chunk-RX5CSWJW.js";
197
+ } from "./chunks/chunk-VST5SR4C.js";
191
198
  import "./chunks/chunk-UMNCCYBN.js";
199
+ import {
200
+ NODE_WIDTHS,
201
+ maxNodeWidthPx,
202
+ meanDepth,
203
+ nodeInk,
204
+ nodeWidthPx
205
+ } from "./chunks/chunk-PBENCR5L.js";
192
206
  import {
193
207
  HALO_FACTOR,
194
208
  LEGEND_INSET_PX,
195
209
  geneCoverageNote,
196
210
  layoutLabels
197
- } from "./chunks/chunk-DKOB2OPC.js";
211
+ } from "./chunks/chunk-GJMC3PGM.js";
198
212
  import {
199
213
  findHoveredEdge,
200
214
  findHoveredNode
201
- } from "./chunks/chunk-YMSSF2RK.js";
202
- import "./chunks/chunk-MREQ7GIA.js";
203
- import "./chunks/chunk-Y3IOTZJA.js";
215
+ } from "./chunks/chunk-FP4H7SFT.js";
216
+ import "./chunks/chunk-MLSWIMZO.js";
217
+ import "./chunks/chunk-WFB5TXRA.js";
204
218
  import {
205
219
  walkRowsExtent
206
220
  } from "./chunks/chunk-EZPBJPK6.js";
@@ -211,25 +225,18 @@ import {
211
225
  import {
212
226
  pathColorsLegible,
213
227
  pathLegend
214
- } from "./chunks/chunk-X5L37W4J.js";
215
- import "./chunks/chunk-ST2IBUAN.js";
228
+ } from "./chunks/chunk-E7FWQQHP.js";
216
229
  import "./chunks/chunk-ES2N6V56.js";
230
+ import "./chunks/chunk-ST2IBUAN.js";
217
231
  import {
218
232
  formatBp
219
- } from "./chunks/chunk-N62KBLFC.js";
233
+ } from "./chunks/chunk-3ZZSX5HN.js";
220
234
  import {
221
235
  LABEL_CHAR_PX,
222
236
  LABEL_PAD,
223
237
  LABEL_PX
224
238
  } from "./chunks/chunk-AB35TJST.js";
225
239
  import "./chunks/chunk-TAMCZHLW.js";
226
- import {
227
- NODE_WIDTHS,
228
- maxNodeWidthPx,
229
- meanDepth,
230
- nodeInk,
231
- nodeWidthPx
232
- } from "./chunks/chunk-PBENCR5L.js";
233
240
  import {
234
241
  BUBBLE_SPREADS
235
242
  } from "./chunks/chunk-UVBGRJQX.js";
@@ -239,8 +246,9 @@ import {
239
246
  resolveColorScheme
240
247
  } from "./chunks/chunk-JKJWSY4V.js";
241
248
  import {
249
+ deletionDrawing,
242
250
  deletionEdges
243
- } from "./chunks/chunk-4EMPBO7S.js";
251
+ } from "./chunks/chunk-N6FECAXP.js";
244
252
  import "./chunks/chunk-2CVHXFK7.js";
245
253
  import {
246
254
  ROW_HEIGHT_PX
@@ -305,6 +313,7 @@ export {
305
313
  LABEL_CHAR_PX,
306
314
  LABEL_PAD,
307
315
  LABEL_PX,
316
+ LAYOUT_ENGINES,
308
317
  LAYOUT_MODES,
309
318
  LEGEND_INSET_PX,
310
319
  NODE_WIDTHS,
@@ -340,6 +349,7 @@ export {
340
349
  contains,
341
350
  cutGbzRegion,
342
351
  cutWindowGFA,
352
+ deletionDrawing,
343
353
  deletionEdges,
344
354
  drawReferenceStrip,
345
355
  drawTubeMap,
@@ -375,6 +385,7 @@ export {
375
385
  getDpr,
376
386
  graphBackbone,
377
387
  haplotypeWanted,
388
+ layoutEngine,
378
389
  layoutExtent,
379
390
  layoutLabels,
380
391
  layoutModeByValue,
@@ -419,6 +430,7 @@ export {
419
430
  screenToLayout,
420
431
  segmentAt,
421
432
  serializeEl,
433
+ stressLayout,
422
434
  stripBlockAt,
423
435
  stripGeneGaps,
424
436
  stripMarks,
@@ -4,14 +4,14 @@ import {
4
4
  geneCoverageNote,
5
5
  geneLabelCandidates,
6
6
  layoutLabels
7
- } from "./chunks/chunk-DKOB2OPC.js";
8
- import "./chunks/chunk-YMSSF2RK.js";
9
- import "./chunks/chunk-MREQ7GIA.js";
10
- import "./chunks/chunk-Y3IOTZJA.js";
11
- import "./chunks/chunk-N62KBLFC.js";
7
+ } from "./chunks/chunk-GJMC3PGM.js";
8
+ import "./chunks/chunk-FP4H7SFT.js";
9
+ import "./chunks/chunk-MLSWIMZO.js";
10
+ import "./chunks/chunk-WFB5TXRA.js";
11
+ import "./chunks/chunk-3ZZSX5HN.js";
12
12
  import "./chunks/chunk-AB35TJST.js";
13
13
  import "./chunks/chunk-TAMCZHLW.js";
14
- import "./chunks/chunk-4EMPBO7S.js";
14
+ import "./chunks/chunk-N6FECAXP.js";
15
15
  import "./chunks/chunk-2CVHXFK7.js";
16
16
  import "./chunks/chunk-CPMHA4W5.js";
17
17
  import "./chunks/chunk-FYQWPEEY.js";
@@ -1,11 +1,9 @@
1
1
  import {
2
- closableDeletions,
3
2
  routeNodes,
4
3
  takeRoutes,
5
4
  withDeletionRoutes
6
- } from "../chunks/chunk-STNG3Y5X.js";
5
+ } from "../chunks/chunk-YZ5CCEDH.js";
7
6
  export {
8
- closableDeletions,
9
7
  routeNodes,
10
8
  takeRoutes,
11
9
  withDeletionRoutes
@@ -0,0 +1,11 @@
1
+ import {
2
+ LAYOUT_ENGINES,
3
+ LAYOUT_ENGINE_VALUES,
4
+ stressLayout
5
+ } from "../chunks/chunk-O4TGF4WS.js";
6
+ import "../chunks/chunk-FYQWPEEY.js";
7
+ export {
8
+ LAYOUT_ENGINES,
9
+ LAYOUT_ENGINE_VALUES,
10
+ stressLayout
11
+ };
@@ -5,15 +5,15 @@ import {
5
5
  tubeMapTracks,
6
6
  tubeWidth,
7
7
  visitStrands
8
- } from "../chunks/chunk-R6ZUK4Y3.js";
8
+ } from "../chunks/chunk-4FQTTG5F.js";
9
9
  import "../chunks/chunk-TEDQJPMI.js";
10
10
  import "../chunks/chunk-C44YRP5F.js";
11
- import "../chunks/chunk-X5L37W4J.js";
11
+ import "../chunks/chunk-E7FWQQHP.js";
12
12
  import "../chunks/chunk-ST2IBUAN.js";
13
- import "../chunks/chunk-N62KBLFC.js";
13
+ import "../chunks/chunk-3ZZSX5HN.js";
14
14
  import "../chunks/chunk-AB35TJST.js";
15
15
  import "../chunks/chunk-TAMCZHLW.js";
16
- import "../chunks/chunk-4EMPBO7S.js";
16
+ import "../chunks/chunk-N6FECAXP.js";
17
17
  import "../chunks/chunk-2CVHXFK7.js";
18
18
  import "../chunks/chunk-CPMHA4W5.js";
19
19
  import "../chunks/chunk-BPLIXMH7.js";
@@ -21,19 +21,19 @@ import {
21
21
  walkRowsKey,
22
22
  walkRowsKeyTree,
23
23
  walkRowsTree
24
- } from "../chunks/chunk-PJESIRDU.js";
25
- import "../chunks/chunk-ZHCDYSA5.js";
26
- import "../chunks/chunk-RX5CSWJW.js";
24
+ } from "../chunks/chunk-JFNPL4UT.js";
25
+ import "../chunks/chunk-VECR253P.js";
26
+ import "../chunks/chunk-VST5SR4C.js";
27
27
  import "../chunks/chunk-UMNCCYBN.js";
28
- import "../chunks/chunk-Y3IOTZJA.js";
29
- import "../chunks/chunk-X5L37W4J.js";
30
- import "../chunks/chunk-ST2IBUAN.js";
28
+ import "../chunks/chunk-PBENCR5L.js";
29
+ import "../chunks/chunk-WFB5TXRA.js";
30
+ import "../chunks/chunk-E7FWQQHP.js";
31
31
  import "../chunks/chunk-ES2N6V56.js";
32
- import "../chunks/chunk-N62KBLFC.js";
32
+ import "../chunks/chunk-ST2IBUAN.js";
33
+ import "../chunks/chunk-3ZZSX5HN.js";
33
34
  import "../chunks/chunk-AB35TJST.js";
34
35
  import "../chunks/chunk-TAMCZHLW.js";
35
- import "../chunks/chunk-PBENCR5L.js";
36
- import "../chunks/chunk-4EMPBO7S.js";
36
+ import "../chunks/chunk-N6FECAXP.js";
37
37
  import "../chunks/chunk-2CVHXFK7.js";
38
38
  import "../chunks/chunk-CPMHA4W5.js";
39
39
  import "../chunks/chunk-NNODIW4U.js";
@@ -8,20 +8,20 @@ import {
8
8
  walkMarksTree,
9
9
  walkStripFrame,
10
10
  walkStripLabelsTree
11
- } from "../chunks/chunk-V5BPIOLS.js";
12
- import "../chunks/chunk-PJESIRDU.js";
13
- import "../chunks/chunk-ZHCDYSA5.js";
14
- import "../chunks/chunk-RX5CSWJW.js";
11
+ } from "../chunks/chunk-MZ7QQRUJ.js";
12
+ import "../chunks/chunk-JFNPL4UT.js";
13
+ import "../chunks/chunk-VECR253P.js";
14
+ import "../chunks/chunk-VST5SR4C.js";
15
15
  import "../chunks/chunk-UMNCCYBN.js";
16
- import "../chunks/chunk-Y3IOTZJA.js";
17
- import "../chunks/chunk-X5L37W4J.js";
18
- import "../chunks/chunk-ST2IBUAN.js";
16
+ import "../chunks/chunk-PBENCR5L.js";
17
+ import "../chunks/chunk-WFB5TXRA.js";
18
+ import "../chunks/chunk-E7FWQQHP.js";
19
19
  import "../chunks/chunk-ES2N6V56.js";
20
- import "../chunks/chunk-N62KBLFC.js";
20
+ import "../chunks/chunk-ST2IBUAN.js";
21
+ import "../chunks/chunk-3ZZSX5HN.js";
21
22
  import "../chunks/chunk-AB35TJST.js";
22
23
  import "../chunks/chunk-TAMCZHLW.js";
23
- import "../chunks/chunk-PBENCR5L.js";
24
- import "../chunks/chunk-4EMPBO7S.js";
24
+ import "../chunks/chunk-N6FECAXP.js";
25
25
  import "../chunks/chunk-2CVHXFK7.js";
26
26
  import "../chunks/chunk-CPMHA4W5.js";
27
27
  import "../chunks/chunk-NNODIW4U.js";
@@ -0,0 +1,9 @@
1
+ import {
2
+ layoutEngine
3
+ } from "./chunks/chunk-L53SXJZI.js";
4
+ import "./chunks/chunk-O4TGF4WS.js";
5
+ import "./chunks/chunk-7XHHVYG7.js";
6
+ import "./chunks/chunk-FYQWPEEY.js";
7
+ export {
8
+ layoutEngine
9
+ };