@jbrowse/bandage-core 11.9.0 → 11.11.0

package/dist/figureData.js

@@ -3,29 +3,29 @@ import {
   gfaFigureData,
   laidOutGraph,
   walkLayers
-} from "./chunks/chunk-T2UNTWU5.js";
+} from "./chunks/chunk-7553WCL3.js";
 import "./chunks/chunk-CO6RGQAD.js";
-import "./chunks/chunk-ARXDNQLF.js";
+import "./chunks/chunk-WE7CLY2E.js";
+import "./chunks/chunk-XR2HMGAS.js";
 import "./chunks/chunk-BDS5VZYZ.js";
 import "./chunks/chunk-KKHXMJEE.js";
-import "./chunks/chunk-XR2HMGAS.js";
 import "./chunks/chunk-GJLZ2MKE.js";
 import "./chunks/chunk-MYLAJDKB.js";
 import "./chunks/chunk-5OJZV6YT.js";
-import "./chunks/chunk-UAFATXYA.js";
 import "./chunks/chunk-3GLG3ZLE.js";
+import "./chunks/chunk-UAFATXYA.js";
 import "./chunks/chunk-FNDNSDKW.js";
 import "./chunks/chunk-ZKSC7QVE.js";
 import "./chunks/chunk-HNWJ4B7S.js";
 import "./chunks/chunk-HEYIAMTC.js";
-import "./chunks/chunk-N3DCLT7M.js";
+import "./chunks/chunk-N4QOWBRR.js";
 import "./chunks/chunk-3DHGSHC3.js";
-import "./chunks/chunk-I5CHAYDZ.js";
+import "./chunks/chunk-R36RBFNH.js";
 import "./chunks/chunk-LOCJN3BZ.js";
-import "./chunks/chunk-ZWBQ4RRK.js";
-import "./chunks/chunk-UEWIGD52.js";
-import "./chunks/chunk-GDZQFELP.js";
-import "./chunks/chunk-3BDQQTXY.js";
+import "./chunks/chunk-F47LKG5B.js";
+import "./chunks/chunk-EB4Q35QD.js";
+import "./chunks/chunk-GXCMBPC6.js";
+import "./chunks/chunk-4KBZ7WPP.js";
 import "./chunks/chunk-G2FD7S3C.js";
 import "./chunks/chunk-IZKM4NY7.js";
 import "./chunks/chunk-GQZVR5DW.js";
@@ -35,7 +35,7 @@ import "./chunks/chunk-C3KAPREU.js";
 import "./chunks/chunk-LODKC7PJ.js";
 import "./chunks/chunk-VQ353UDK.js";
 import "./chunks/chunk-ZANALBSX.js";
-import "./chunks/chunk-2MXFG3W7.js";
+import "./chunks/chunk-PYK4JKYW.js";
 import "./chunks/chunk-JVT3XTKN.js";
 import "./chunks/chunk-OPPVSPEF.js";
 import "./chunks/chunk-NAYS472K.js";
@@ -65,6 +65,7 @@ import "./chunks/chunk-ZPZ7GNBT.js";
 import "./chunks/chunk-BSOZW3FC.js";
 import "./chunks/chunk-RJWPJCIB.js";
 import "./chunks/chunk-HOAIOEI7.js";
+import "./chunks/chunk-DAEEMZ74.js";
 import "./chunks/chunk-BLUEFYIR.js";
 import "./chunks/chunk-2JL2JVZ2.js";
 export {

package/dist/figureScene.js

@@ -1,11 +1,11 @@
 import {
   figureScene
-} from "./chunks/chunk-I5CHAYDZ.js";
+} from "./chunks/chunk-R36RBFNH.js";
 import "./chunks/chunk-LOCJN3BZ.js";
-import "./chunks/chunk-ZWBQ4RRK.js";
-import "./chunks/chunk-UEWIGD52.js";
-import "./chunks/chunk-GDZQFELP.js";
-import "./chunks/chunk-3BDQQTXY.js";
+import "./chunks/chunk-F47LKG5B.js";
+import "./chunks/chunk-EB4Q35QD.js";
+import "./chunks/chunk-GXCMBPC6.js";
+import "./chunks/chunk-4KBZ7WPP.js";
 import "./chunks/chunk-G2FD7S3C.js";
 import "./chunks/chunk-IZKM4NY7.js";
 import "./chunks/chunk-GQZVR5DW.js";
@@ -15,7 +15,7 @@ import "./chunks/chunk-C3KAPREU.js";
 import "./chunks/chunk-LODKC7PJ.js";
 import "./chunks/chunk-VQ353UDK.js";
 import "./chunks/chunk-ZANALBSX.js";
-import "./chunks/chunk-2MXFG3W7.js";
+import "./chunks/chunk-PYK4JKYW.js";
 import "./chunks/chunk-JVT3XTKN.js";
 import "./chunks/chunk-OPPVSPEF.js";
 import "./chunks/chunk-NAYS472K.js";
@@ -45,6 +45,7 @@ import "./chunks/chunk-ZPZ7GNBT.js";
 import "./chunks/chunk-BSOZW3FC.js";
 import "./chunks/chunk-RJWPJCIB.js";
 import "./chunks/chunk-HOAIOEI7.js";
+import "./chunks/chunk-DAEEMZ74.js";
 import "./chunks/chunk-BLUEFYIR.js";
 import "./chunks/chunk-2JL2JVZ2.js";
 export {

package/dist/figureSettings.js

@@ -1,7 +1,7 @@
 import {
   FIGURE_DEFAULTS,
   figureSpecSettings
-} from "./chunks/chunk-2MXFG3W7.js";
+} from "./chunks/chunk-PYK4JKYW.js";
 import "./chunks/chunk-JVT3XTKN.js";
 import "./chunks/chunk-OPPVSPEF.js";
 import "./chunks/chunk-NAYS472K.js";

package/dist/index.js

@@ -1,6 +1,13 @@
 import {
   wheelZoomFactor
 } from "./chunks/chunk-TDQLINVI.js";
+import {
+  drawTubeMap,
+  drawTubeMapHighlight,
+  tubeMapMismatchAt,
+  tubeMapPicture,
+  tubeMapTrackAt
+} from "./chunks/chunk-HIN56TLA.js";
 import {
   tubeMapFrame,
   tubeMapNodeAt
@@ -9,9 +16,14 @@ import {
   drawTubeMapGenes,
   tubeMapGenes
 } from "./chunks/chunk-RT4U3DH3.js";
+import "./chunks/chunk-BX4AUMZE.js";
 import {
   tubeMapNodeColors
-} from "./chunks/chunk-GYJMPVOU.js";
+} from "./chunks/chunk-I5HVXRAO.js";
+import {
+  referenceKnots,
+  warpX
+} from "./chunks/chunk-MYDHU2UV.js";
 import {
   bundleRoutes
 } from "./chunks/chunk-S6E3PMH7.js";
@@ -27,18 +39,6 @@ import {
   rulerBoxes,
   tubeX
 } from "./chunks/chunk-I53QYITQ.js";
-import {
-  drawTubeMap,
-  drawTubeMapHighlight,
-  tubeMapMismatchAt,
-  tubeMapPicture,
-  tubeMapTrackAt
-} from "./chunks/chunk-HIN56TLA.js";
-import "./chunks/chunk-BX4AUMZE.js";
-import {
-  referenceKnots,
-  warpX
-} from "./chunks/chunk-MYDHU2UV.js";
 import {
   ribbonJoin,
   sharedRowOrder,
@@ -48,6 +48,15 @@ import {
 import {
   createForceLayoutCache
 } from "./chunks/chunk-2A6Z2DHF.js";
+import {
+  backboneGenes
+} from "./chunks/chunk-376YFQOY.js";
+import {
+  genesFromBed,
+  genesFromGff3Lines,
+  genesFromText,
+  mergeOverlappingByName
+} from "./chunks/chunk-EQDQ7P4Y.js";
 import {
   graphBubbles,
   superbubblesFromGraph
@@ -68,21 +77,16 @@ import "./chunks/chunk-FX4RDMDN.js";
 import {
   bubbleSubgraph
 } from "./chunks/chunk-MHZTTLBU.js";
-import {
-  backboneGenes
-} from "./chunks/chunk-376YFQOY.js";
-import {
-  genesFromBed,
-  genesFromGff3Lines,
-  genesFromText,
-  mergeOverlappingByName
-} from "./chunks/chunk-EQDQ7P4Y.js";
 import {
   REFERENCE_STRIP_ZONE_PX,
   drawReferenceStrip,
   referenceStripBlocks,
   stripBlockAt
-} from "./chunks/chunk-VTGQCLGI.js";
+} from "./chunks/chunk-LNLYK3Y5.js";
+import {
+  edgeHoverText,
+  regionLabel
+} from "./chunks/chunk-AZFVORTC.js";
 import {
   LAYOUT_QUALITIES
 } from "./chunks/chunk-K5SIJGAE.js";
@@ -91,12 +95,49 @@ import {
   parseLocus
 } from "./chunks/chunk-PQIFYQVI.js";
 import {
-  edgeHoverText,
-  regionLabel
-} from "./chunks/chunk-AZFVORTC.js";
+  figureData,
+  gfaFigureData
+} from "./chunks/chunk-7553WCL3.js";
+import {
+  LAYOUT_ENGINES,
+  layoutEngine
+} from "./chunks/chunk-CO6RGQAD.js";
+import {
+  FORCE_LAYOUT_LABEL,
+  LAYOUT_MODES,
+  layoutModeByValue,
+  modeUsesLayoutEngine
+} from "./chunks/chunk-WE7CLY2E.js";
+import "./chunks/chunk-XR2HMGAS.js";
+import "./chunks/chunk-BDS5VZYZ.js";
+import "./chunks/chunk-KKHXMJEE.js";
+import "./chunks/chunk-GJLZ2MKE.js";
+import "./chunks/chunk-MYLAJDKB.js";
+import "./chunks/chunk-5OJZV6YT.js";
+import "./chunks/chunk-3GLG3ZLE.js";
+import "./chunks/chunk-UAFATXYA.js";
+import {
+  HPRC_GBZ,
+  cutGbzRegion,
+  openGbz,
+  parseRegion
+} from "./chunks/chunk-FNDNSDKW.js";
+import {
+  compactTables,
+  cutWindowGFA,
+  cutWindowTables,
+  haplotypeWanted,
+  referencePathQuery,
+  referenceSamplesOf,
+  resolveReferenceSample
+} from "./chunks/chunk-ZKSC7QVE.js";
+import "./chunks/chunk-HNWJ4B7S.js";
 import {
   figureSvg
-} from "./chunks/chunk-3BOREHCJ.js";
+} from "./chunks/chunk-JPT44REW.js";
+import {
+  svgCanvas
+} from "./chunks/chunk-V4YML3GR.js";
 import {
   WALK_STRIP_CEILING_PX,
   cutsWholeWalks,
@@ -108,16 +149,13 @@ import {
   walkStripApplies,
   walkStripFrame,
   walkStripLabelsTree
-} from "./chunks/chunk-JO2T77NW.js";
+} from "./chunks/chunk-KYTV5EAZ.js";
 import {
   Canvas2DRenderer
 } from "./chunks/chunk-4DMSPNYV.js";
 import {
   getDpr
 } from "./chunks/chunk-RBCE2OQH.js";
-import {
-  svgCanvas
-} from "./chunks/chunk-V4YML3GR.js";
 import {
   BAR_PX,
   CALL_TICK,
@@ -145,7 +183,7 @@ import {
   walkRowsKey,
   walkRowsKeyTree,
   walkRowsTree
-} from "./chunks/chunk-IXLT3JJX.js";
+} from "./chunks/chunk-SVP2CQTA.js";
 import {
   EXON_COLOR,
   exonOutlineTree,
@@ -162,54 +200,12 @@ import {
   findHoveredNode
 } from "./chunks/chunk-4JDO7ZLN.js";
 import "./chunks/chunk-7YSIP3O2.js";
-import {
-  el,
-  serializeEl
-} from "./chunks/chunk-H2H4Y3TV.js";
-import {
-  figureData,
-  gfaFigureData
-} from "./chunks/chunk-T2UNTWU5.js";
-import {
-  LAYOUT_ENGINES,
-  layoutEngine
-} from "./chunks/chunk-CO6RGQAD.js";
-import {
-  FORCE_LAYOUT_LABEL,
-  LAYOUT_MODES,
-  layoutModeByValue,
-  modeUsesLayoutEngine
-} from "./chunks/chunk-ARXDNQLF.js";
-import "./chunks/chunk-BDS5VZYZ.js";
-import "./chunks/chunk-KKHXMJEE.js";
-import "./chunks/chunk-XR2HMGAS.js";
-import "./chunks/chunk-GJLZ2MKE.js";
-import "./chunks/chunk-MYLAJDKB.js";
-import "./chunks/chunk-5OJZV6YT.js";
-import "./chunks/chunk-UAFATXYA.js";
-import "./chunks/chunk-3GLG3ZLE.js";
-import {
-  HPRC_GBZ,
-  cutGbzRegion,
-  openGbz,
-  parseRegion
-} from "./chunks/chunk-FNDNSDKW.js";
-import {
-  compactTables,
-  cutWindowGFA,
-  cutWindowTables,
-  haplotypeWanted,
-  referencePathQuery,
-  referenceSamplesOf,
-  resolveReferenceSample
-} from "./chunks/chunk-ZKSC7QVE.js";
-import "./chunks/chunk-HNWJ4B7S.js";
 import {
   genePins
 } from "./chunks/chunk-HEYIAMTC.js";
 import {
   version
-} from "./chunks/chunk-N3DCLT7M.js";
+} from "./chunks/chunk-N4QOWBRR.js";
 import {
   axisScaleOf,
   contains,
@@ -218,7 +214,7 @@ import {
   viewportOf,
   zoomAbout
 } from "./chunks/chunk-3DHGSHC3.js";
-import "./chunks/chunk-I5CHAYDZ.js";
+import "./chunks/chunk-R36RBFNH.js";
 import {
   layoutGeometryInputs
 } from "./chunks/chunk-LOCJN3BZ.js";
@@ -226,7 +222,7 @@ import {
   facetLifts,
   walkHighlight,
   walkLift
-} from "./chunks/chunk-ZWBQ4RRK.js";
+} from "./chunks/chunk-F47LKG5B.js";
 import {
   WALK_FIELDS,
   WALK_SCHEMES,
@@ -234,12 +230,12 @@ import {
   encodingSwatchCss,
   resolveEncoding,
   schemeCss
-} from "./chunks/chunk-UEWIGD52.js";
+} from "./chunks/chunk-EB4Q35QD.js";
 import {
   buildGeometry,
   computeReferenceRamp
-} from "./chunks/chunk-GDZQFELP.js";
-import "./chunks/chunk-3BDQQTXY.js";
+} from "./chunks/chunk-GXCMBPC6.js";
+import "./chunks/chunk-4KBZ7WPP.js";
 import "./chunks/chunk-G2FD7S3C.js";
 import {
   rangeText,
@@ -283,7 +279,7 @@ import {
 import {
   FIGURE_DEFAULTS,
   figureSpecSettings
-} from "./chunks/chunk-2MXFG3W7.js";
+} from "./chunks/chunk-PYK4JKYW.js";
 import {
   ENGINE_DEFAULTS,
   FIT_PADDING,
@@ -366,6 +362,15 @@ import {
 import "./chunks/chunk-BSOZW3FC.js";
 import "./chunks/chunk-RJWPJCIB.js";
 import "./chunks/chunk-HOAIOEI7.js";
+import {
+  EDGE_WIDTHS,
+  busiestEdge,
+  edgeWidthFactor
+} from "./chunks/chunk-DAEEMZ74.js";
+import {
+  el,
+  serializeEl
+} from "./chunks/chunk-H2H4Y3TV.js";
 import {
   FACET_FIELDS,
   FACET_GAP_PX,
@@ -390,6 +395,7 @@ export {
   BUBBLE_SPREADS,
   COLOR_SCHEMES,
   Canvas2DRenderer,
+  EDGE_WIDTHS,
   END_STOP_TAG,
   ENGINE_DEFAULTS,
   EXON_COLOR,
@@ -444,6 +450,7 @@ export {
   bubblesFromGraph,
   buildGeometry,
   bundleRoutes,
+  busiestEdge,
   callTickInk,
   clampZoom,
   classifyBubble,
@@ -468,6 +475,7 @@ export {
   drawTubeMapRuler,
   drawingBounds,
   edgeHoverText,
+  edgeWidthFactor,
   el,
   encodingStops,
   encodingSwatchCss,

package/dist/layout/walkRowDraw.js

@@ -30,10 +30,9 @@ import {
   walkRowsKey,
   walkRowsKeyTree,
   walkRowsTree
-} from "../chunks/chunk-IXLT3JJX.js";
-import "../chunks/chunk-H2H4Y3TV.js";
-import "../chunks/chunk-GDZQFELP.js";
-import "../chunks/chunk-3BDQQTXY.js";
+} from "../chunks/chunk-SVP2CQTA.js";
+import "../chunks/chunk-GXCMBPC6.js";
+import "../chunks/chunk-4KBZ7WPP.js";
 import "../chunks/chunk-G2FD7S3C.js";
 import "../chunks/chunk-GQZVR5DW.js";
 import "../chunks/chunk-P2GJBFNA.js";
@@ -54,6 +53,8 @@ import "../chunks/chunk-ZPZ7GNBT.js";
 import "../chunks/chunk-BSOZW3FC.js";
 import "../chunks/chunk-RJWPJCIB.js";
 import "../chunks/chunk-HOAIOEI7.js";
+import "../chunks/chunk-DAEEMZ74.js";
+import "../chunks/chunk-H2H4Y3TV.js";
 import "../chunks/chunk-2JL2JVZ2.js";
 export {
   ABRIDGED_GAP,

package/dist/layout/walkStrip.js

@@ -9,13 +9,12 @@ import {
   walkStripApplies,
   walkStripFrame,
   walkStripLabelsTree
-} from "../chunks/chunk-JO2T77NW.js";
+} from "../chunks/chunk-KYTV5EAZ.js";
 import {
   LABELLED_ROW_PX
-} from "../chunks/chunk-IXLT3JJX.js";
-import "../chunks/chunk-H2H4Y3TV.js";
-import "../chunks/chunk-GDZQFELP.js";
-import "../chunks/chunk-3BDQQTXY.js";
+} from "../chunks/chunk-SVP2CQTA.js";
+import "../chunks/chunk-GXCMBPC6.js";
+import "../chunks/chunk-4KBZ7WPP.js";
 import "../chunks/chunk-G2FD7S3C.js";
 import "../chunks/chunk-GQZVR5DW.js";
 import "../chunks/chunk-P2GJBFNA.js";
@@ -40,6 +39,8 @@ import "../chunks/chunk-ZPZ7GNBT.js";
 import "../chunks/chunk-BSOZW3FC.js";
 import "../chunks/chunk-RJWPJCIB.js";
 import "../chunks/chunk-HOAIOEI7.js";
+import "../chunks/chunk-DAEEMZ74.js";
+import "../chunks/chunk-H2H4Y3TV.js";
 import "../chunks/chunk-2JL2JVZ2.js";
 export {
   LABELLED_ROW_PX,

package/dist/layoutModes.js

@@ -4,15 +4,15 @@ import {
   LAYOUT_MODE_VALUES,
   layoutModeByValue,
   modeUsesLayoutEngine
-} from "./chunks/chunk-ARXDNQLF.js";
+} from "./chunks/chunk-WE7CLY2E.js";
+import "./chunks/chunk-XR2HMGAS.js";
 import "./chunks/chunk-BDS5VZYZ.js";
 import "./chunks/chunk-KKHXMJEE.js";
-import "./chunks/chunk-XR2HMGAS.js";
 import "./chunks/chunk-GJLZ2MKE.js";
 import "./chunks/chunk-MYLAJDKB.js";
 import "./chunks/chunk-5OJZV6YT.js";
-import "./chunks/chunk-UAFATXYA.js";
 import "./chunks/chunk-3GLG3ZLE.js";
+import "./chunks/chunk-UAFATXYA.js";
 import "./chunks/chunk-VCUOYVLC.js";
 import "./chunks/chunk-C3KAPREU.js";
 import "./chunks/chunk-LODKC7PJ.js";

package/dist/referenceStrip.js

@@ -7,9 +7,9 @@ import {
   stripBlockAt,
   stripOverhang,
   stripPixels
-} from "./chunks/chunk-VTGQCLGI.js";
-import "./chunks/chunk-GDZQFELP.js";
-import "./chunks/chunk-3BDQQTXY.js";
+} from "./chunks/chunk-LNLYK3Y5.js";
+import "./chunks/chunk-GXCMBPC6.js";
+import "./chunks/chunk-4KBZ7WPP.js";
 import "./chunks/chunk-G2FD7S3C.js";
 import "./chunks/chunk-GQZVR5DW.js";
 import "./chunks/chunk-P2GJBFNA.js";
@@ -29,6 +29,7 @@ import "./chunks/chunk-ZPZ7GNBT.js";
 import "./chunks/chunk-BSOZW3FC.js";
 import "./chunks/chunk-RJWPJCIB.js";
 import "./chunks/chunk-HOAIOEI7.js";
+import "./chunks/chunk-DAEEMZ74.js";
 import "./chunks/chunk-2JL2JVZ2.js";
 export {
   REFERENCE_STRIP_PX,

package/dist/renderer/GeometryBuilder.js

@@ -11,8 +11,8 @@ import {
   getNodeColor,
   hslToRgb,
   rampFraction
-} from "../chunks/chunk-GDZQFELP.js";
-import "../chunks/chunk-3BDQQTXY.js";
+} from "../chunks/chunk-GXCMBPC6.js";
+import "../chunks/chunk-4KBZ7WPP.js";
 import "../chunks/chunk-G2FD7S3C.js";
 import {
   REFERENCE_RAMP_MAX_HUE
@@ -34,6 +34,7 @@ import "../chunks/chunk-ZPZ7GNBT.js";
 import "../chunks/chunk-BSOZW3FC.js";
 import "../chunks/chunk-RJWPJCIB.js";
 import "../chunks/chunk-HOAIOEI7.js";
+import "../chunks/chunk-DAEEMZ74.js";
 import "../chunks/chunk-2JL2JVZ2.js";
 export {
   FADED_ALPHA,

package/dist/renderer/walkLanes.js

@@ -19,7 +19,7 @@ import {
   slotCentres,
   threadsPasses,
   walkThreads
-} from "../chunks/chunk-3BDQQTXY.js";
+} from "../chunks/chunk-4KBZ7WPP.js";
 import "../chunks/chunk-JJV2GT2Z.js";
 import "../chunks/chunk-CPMHA4W5.js";
 export {

package/dist/tubeMap/nodeColors.js

@@ -1,8 +1,8 @@
 import {
   tubeMapNodeColors
-} from "../chunks/chunk-GYJMPVOU.js";
-import "../chunks/chunk-GDZQFELP.js";
-import "../chunks/chunk-3BDQQTXY.js";
+} from "../chunks/chunk-I5HVXRAO.js";
+import "../chunks/chunk-GXCMBPC6.js";
+import "../chunks/chunk-4KBZ7WPP.js";
 import "../chunks/chunk-G2FD7S3C.js";
 import "../chunks/chunk-GQZVR5DW.js";
 import "../chunks/chunk-P2GJBFNA.js";
@@ -22,6 +22,7 @@ import "../chunks/chunk-ZPZ7GNBT.js";
 import "../chunks/chunk-BSOZW3FC.js";
 import "../chunks/chunk-RJWPJCIB.js";
 import "../chunks/chunk-HOAIOEI7.js";
+import "../chunks/chunk-DAEEMZ74.js";
 import "../chunks/chunk-2JL2JVZ2.js";
 export {
   tubeMapNodeColors

package/dist/types/edgeWidths.d.ts

@@ -0,0 +1,13 @@
+import type { Graph } from './types.js';
+export declare const EDGE_WIDTHS: readonly [{
+    readonly value: "uniform";
+    readonly label: "Uniform";
+    readonly description: "Every link the same thickness.";
+}, {
+    readonly value: "walks";
+    readonly label: "By walks";
+    readonly description: "Thicker the more walks take a link, on the square root of its count against the busiest link in the cut. A graph without walks draws uniform.";
+}];
+export type EdgeWidth = (typeof EDGE_WIDTHS)[number]['value'];
+export declare function busiestEdge(graph: Graph): number;
+export declare function edgeWidthFactor(walks: number, busiest: number, edgeWidth: EdgeWidth): number;

package/dist/types/figure.d.ts

@@ -1,4 +1,5 @@
 import type { ColorScheme } from './colorSchemes.js';
+import type { EdgeWidth } from './edgeWidths.js';
 import type { FacetInput } from './facetGrid.js';
 import type { GeneModel } from './genes/genePins.js';
 import type { GeneGaps, RowGene, RowPitch, WalkRowsWithCalls } from './layout/walkRowDraw.js';
@@ -13,6 +14,7 @@ export interface FigureOptions {
     facet?: FacetInput;
     colorScheme?: ColorScheme;
     nodeWidth?: NodeWidth;
+    edgeWidth?: EdgeWidth;
     showDeletionEdges?: boolean;
     linearLayout?: boolean;
     contigThickness?: number;

package/dist/types/figureData.d.ts

@@ -4,7 +4,7 @@ import type { LayoutEngineKind } from './layoutEngines.js';
 import type { LayoutModeValue } from './layoutModes.js';
 import type { Graph, LayoutResult } from './types.js';
 import type { WalkLayer } from './walkEncoding.js';
-export type FigureDataOptions = Pick<FigureOptions, 'width' | 'height' | 'walks' | 'facet' | 'colorScheme' | 'nodeWidth' | 'showDeletionEdges' | 'linearLayout' | 'contigThickness' | 'connectorThickness' | 'region' | 'referenceName' | 'colorDomain' | 'fitToDrawing' | 'genes'>;
+export type FigureDataOptions = Pick<FigureOptions, 'width' | 'height' | 'walks' | 'facet' | 'colorScheme' | 'nodeWidth' | 'edgeWidth' | 'showDeletionEdges' | 'linearLayout' | 'contigThickness' | 'connectorThickness' | 'region' | 'referenceName' | 'colorDomain' | 'fitToDrawing' | 'genes'>;
 type Columns<T> = {
     [K in keyof T]: T[K][];
 };

package/dist/types/figureScene.d.ts

@@ -2,7 +2,7 @@ import type { FigureOptions } from './figure.js';
 import type { Graph, LayoutResult } from './types.js';
 import type { AxisScale } from './util/geometry.js';
 import type { LiftedWalk, WalkLift } from './walkHighlight.js';
-export type FigureSceneOptions = Pick<FigureOptions, 'walks' | 'facet' | 'colorScheme' | 'nodeWidth' | 'showDeletionEdges' | 'linearLayout' | 'contigThickness' | 'connectorThickness' | 'region' | 'referenceName' | 'colorDomain' | 'fitToDrawing' | 'walkRows' | 'walkRowPitch'>;
+export type FigureSceneOptions = Pick<FigureOptions, 'walks' | 'facet' | 'colorScheme' | 'nodeWidth' | 'edgeWidth' | 'showDeletionEdges' | 'linearLayout' | 'contigThickness' | 'connectorThickness' | 'region' | 'referenceName' | 'colorDomain' | 'fitToDrawing' | 'walkRows' | 'walkRowPitch'>;
 export declare function figureScene(graph: Graph, layout: LayoutResult, o: FigureSceneOptions): {
     bounds: {
         minX: number;

package/dist/types/figureSettings.d.ts

@@ -1,4 +1,5 @@
 import type { ColorScheme } from './colorSchemes.js';
+import type { EdgeWidth } from './edgeWidths.js';
 import type { NodeWidth } from './nodeWidths.js';
 import type { EngineSettings } from './pipeline.js';
 export interface FigureSettings extends Partial<EngineSettings> {
@@ -6,6 +7,7 @@ export interface FigureSettings extends Partial<EngineSettings> {
     height?: number;
     colorScheme?: ColorScheme;
     nodeWidth?: NodeWidth;
+    edgeWidth?: EdgeWidth;
     contigThickness?: number;
     connectorThickness?: number;
     colorDomain?: {

package/dist/types/index.d.ts

@@ -14,6 +14,8 @@ export { COLOR_SCHEMES, resolveColorScheme } from './colorSchemes.js';
 export type { ColorScheme, ResolvedColorScheme } from './colorSchemes.js';
 export { NODE_WIDTHS, maxNodeWidthPx, meanDepth, nodeInk, nodeWidthPx, } from './nodeWidths.js';
 export type { NodeWidth } from './nodeWidths.js';
+export { EDGE_WIDTHS, busiestEdge, edgeWidthFactor } from './edgeWidths.js';
+export type { EdgeWidth } from './edgeWidths.js';
 export { BUBBLE_SPREADS } from './bubbleSpreads.js';
 export { LAYOUT_QUALITIES } from './layoutQualities.js';
 export type { LayoutQuality } from './layoutQualities.js';

package/dist/types/renderer/GeometryBuilder.d.ts

@@ -1,4 +1,5 @@
 import type { ResolvedColorScheme } from '../colorSchemes.js';
+import type { EdgeWidth } from '../edgeWidths.js';
 import type { DeletionRoutes } from '../layout/deletionRoutes.js';
 import type { NodeWidth } from '../nodeWidths.js';
 import type { Graph, GraphNode, NodeSegment } from '../types.js';
@@ -17,6 +18,7 @@ export interface BuildOptions {
     connectorThickness: number;
     drawPaths: boolean;
     nodeWidth?: NodeWidth;
+    edgeWidth?: EdgeWidth;
     highlight?: WalkLift;
     axis: AxisScale;
     linearLayout?: boolean;

package/dist/types/renderer/walkLanes.d.ts

@@ -48,6 +48,7 @@ export declare function laneLines(lanes: LaneRuns, nodePositions: Record<string,
 export interface WalkThreads {
     span: ReadonlyMap<string, number>;
     nodeThreads: Map<string, readonly number[]>;
+    threadPasses: Map<string, readonly number[]>;
     linkThreads: Map<string, Map<string, [number, number][]>>;
 }
 export declare function walkThreads(route: readonly (readonly string[])[], passes: ReadonlyMap<string, number>, nodePositions: Record<string, NodeSegment[]>, yToX: number, reach: number): WalkThreads;

package/dist/types/version.d.ts

@@ -1 +1 @@
-export declare const version = "11.9.0";
+export declare const version = "11.11.0";

package/dist/types/walkEncoding.d.ts

@@ -29,6 +29,10 @@ export declare const WALK_SCHEMES: readonly [{
     readonly value: "green";
     readonly label: "Lime to forest";
     readonly ends: readonly ["#b6e36c", "#0b5d3b"];
+}, {
+    readonly value: "orange";
+    readonly label: "Peach to rust";
+    readonly ends: readonly ["#ffc285", "#8f3a00"];
 }, {
     readonly value: "rainbow";
     readonly label: "Rainbow";