@jbrowse/bandage-core 11.7.1 → 11.7.3

This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
Files changed (77) hide show
  1. package/README.md +58 -40
  2. package/dist/bubbles/bubbleHalos.js +4 -4
  3. package/dist/bubbles/classifyBubble.js +3 -3
  4. package/dist/bubbles/superbubbles.js +5 -5
  5. package/dist/chunks/{chunk-3WSA4NNP.js → chunk-2T3V6Z3M.js} +1 -1
  6. package/dist/chunks/{chunk-IN4IYSA2.js → chunk-2US43KNG.js} +1 -1
  7. package/dist/chunks/{chunk-XTF2VWJN.js → chunk-33KUO34R.js} +1 -1
  8. package/dist/chunks/{chunk-KJDERUQF.js → chunk-4KOYS5WR.js} +44 -9
  9. package/dist/chunks/{chunk-SACSQ45G.js → chunk-4SN7R4UF.js} +1 -1
  10. package/dist/chunks/{chunk-RB2MDFQU.js → chunk-63XWYNID.js} +1 -1
  11. package/dist/chunks/{chunk-I5SGYTRM.js → chunk-6RB5ZQ34.js} +1 -1
  12. package/dist/chunks/{chunk-TCSV3II7.js → chunk-AJQRKN3X.js} +1 -1
  13. package/dist/chunks/{chunk-3Y2EFDID.js → chunk-AWJJSA7D.js} +1 -1
  14. package/dist/chunks/{chunk-JGH2V54E.js → chunk-BLDUBB7X.js} +1 -1
  15. package/dist/chunks/{chunk-JLIVX2SF.js → chunk-CL6ELLVF.js} +1 -1
  16. package/dist/chunks/{chunk-6XDTAKO7.js → chunk-EPOPGV5G.js} +1 -1
  17. package/dist/chunks/{chunk-FBPAX5K6.js → chunk-F4CDC72I.js} +1 -1
  18. package/dist/chunks/{chunk-3UGWYQNY.js → chunk-GD6RUZU5.js} +1 -1
  19. package/dist/chunks/{chunk-PCHEUVHB.js → chunk-IHM43Y7B.js} +1 -1
  20. package/dist/chunks/{chunk-OXW5OHYQ.js → chunk-K4KVAMEF.js} +1 -1
  21. package/dist/chunks/{chunk-J6XHW4KI.js → chunk-KMLATBNT.js} +2 -2
  22. package/dist/chunks/{chunk-Q7I563MH.js → chunk-LH436HS2.js} +1 -1
  23. package/dist/chunks/{chunk-FU57ZNRQ.js → chunk-N73RA4DR.js} +1 -1
  24. package/dist/chunks/{chunk-5NZRT7GL.js → chunk-P276TWPM.js} +1 -1
  25. package/dist/chunks/{chunk-F7O56DVR.js → chunk-PKGPSTRW.js} +1 -1
  26. package/dist/chunks/{chunk-ATDVS2CW.js → chunk-QJC63NFR.js} +2 -2
  27. package/dist/chunks/{chunk-RT4K2JMZ.js → chunk-QLLKALSH.js} +1 -1
  28. package/dist/chunks/{chunk-RK7ZOFPR.js → chunk-QXBQDHKL.js} +11 -11
  29. package/dist/chunks/{chunk-UV2IJMIG.js → chunk-SG7VQB4F.js} +1 -1
  30. package/dist/chunks/{chunk-LKQOIPGE.js → chunk-T3MEG5D3.js} +7 -7
  31. package/dist/chunks/{chunk-EZGNBDHD.js → chunk-UTDMFVC7.js} +7 -7
  32. package/dist/chunks/{chunk-WUZH2OJ6.js → chunk-VNF236GG.js} +1 -1
  33. package/dist/chunks/{chunk-VB4IXIPM.js → chunk-VXKL2ZLR.js} +2 -2
  34. package/dist/chunks/{chunk-PJWLYGRL.js → chunk-W5YRBEWQ.js} +1 -1
  35. package/dist/chunks/{chunk-HTF32WSW.js → chunk-XKPXOIWD.js} +2 -2
  36. package/dist/chunks/{chunk-CWCVQJYY.js → chunk-XTCIKBWM.js} +1 -1
  37. package/dist/chunks/{chunk-APLWFV4I.js → chunk-Z4HXW6ZH.js} +2 -2
  38. package/dist/chunks/{chunk-3PZSBNLI.js → chunk-ZZZ6NVLW.js} +19 -14
  39. package/dist/cli/figure.js +23 -23
  40. package/dist/cli/fold.js +4 -4
  41. package/dist/deletionEdges.js +1 -1
  42. package/dist/figure.js +20 -20
  43. package/dist/figureData.js +17 -17
  44. package/dist/figureScene.js +12 -12
  45. package/dist/figureSettings.js +4 -4
  46. package/dist/foldVariants.js +1 -1
  47. package/dist/graphLabels.js +2 -2
  48. package/dist/index.js +32 -32
  49. package/dist/labelLayout.js +6 -6
  50. package/dist/layout/forceCache.js +4 -4
  51. package/dist/layout/orientToReference.js +3 -1
  52. package/dist/layout/tubeMapLayout.js +4 -4
  53. package/dist/layout/walkRowDraw.js +6 -6
  54. package/dist/layout/walkStrip.js +7 -7
  55. package/dist/layoutModes.js +5 -5
  56. package/dist/pathColors.js +3 -3
  57. package/dist/pipeline.js +3 -3
  58. package/dist/referenceStrip.js +6 -6
  59. package/dist/renderer/GeometryBuilder.js +5 -5
  60. package/dist/tubeMap/axis.js +3 -3
  61. package/dist/tubeMap/bundle.js +5 -5
  62. package/dist/tubeMap/coarsen.js +5 -5
  63. package/dist/tubeMap/deviations.js +6 -6
  64. package/dist/tubeMap/genes.js +4 -4
  65. package/dist/tubeMap/nodeColors.js +6 -6
  66. package/dist/types/foldVariants.d.ts +3 -1
  67. package/dist/types/types.d.ts +1 -0
  68. package/dist/types/version.d.ts +1 -1
  69. package/dist/util/SpatialIndex.js +3 -3
  70. package/dist/util/edgeCurves.js +2 -2
  71. package/dist/util/hitDetection.js +4 -4
  72. package/dist/version.js +1 -1
  73. package/dist/viewport.js +4 -4
  74. package/dist/walkEncoding.js +6 -6
  75. package/dist/walkHighlight.js +7 -7
  76. package/dist/walkKey.js +3 -3
  77. package/package.json +1 -1
package/dist/types/version.d.ts CHANGED
@@ -1 +1 @@
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- export declare const version = "11.7.1";
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+ export declare const version = "11.7.3";
package/dist/util/SpatialIndex.js CHANGED
@@ -1,10 +1,10 @@
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  import {
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  EdgeSpatialIndex,
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  SpatialIndex
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- } from "../chunks/chunk-IN4IYSA2.js";
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- import "../chunks/chunk-XTF2VWJN.js";
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+ } from "../chunks/chunk-2US43KNG.js";
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+ import "../chunks/chunk-33KUO34R.js";
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  import "../chunks/chunk-HMXCN6PG.js";
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- import "../chunks/chunk-5NZRT7GL.js";
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+ import "../chunks/chunk-P276TWPM.js";
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  import "../chunks/chunk-TLWXLNLY.js";
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  import "../chunks/chunk-3YBP46PB.js";
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  import "../chunks/chunk-VACK24HF.js";
package/dist/util/edgeCurves.js CHANGED
@@ -1,8 +1,8 @@
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  import {
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  baseEdgeCurves
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- } from "../chunks/chunk-XTF2VWJN.js";
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+ } from "../chunks/chunk-33KUO34R.js";
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  import "../chunks/chunk-HMXCN6PG.js";
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- import "../chunks/chunk-5NZRT7GL.js";
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+ import "../chunks/chunk-P276TWPM.js";
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  import "../chunks/chunk-TLWXLNLY.js";
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  import "../chunks/chunk-3YBP46PB.js";
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  import "../chunks/chunk-VACK24HF.js";
package/dist/util/hitDetection.js CHANGED
@@ -4,11 +4,11 @@ import {
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  findHoveredEdge,
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  findHoveredNode,
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  nodesUnderBox
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- } from "../chunks/chunk-Q7I563MH.js";
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- import "../chunks/chunk-IN4IYSA2.js";
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- import "../chunks/chunk-XTF2VWJN.js";
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+ } from "../chunks/chunk-LH436HS2.js";
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+ import "../chunks/chunk-2US43KNG.js";
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+ import "../chunks/chunk-33KUO34R.js";
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  import "../chunks/chunk-HMXCN6PG.js";
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- import "../chunks/chunk-5NZRT7GL.js";
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+ import "../chunks/chunk-P276TWPM.js";
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  import "../chunks/chunk-TLWXLNLY.js";
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  import "../chunks/chunk-3YBP46PB.js";
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  import "../chunks/chunk-VACK24HF.js";
package/dist/version.js CHANGED
@@ -1,6 +1,6 @@
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  import {
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  version
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- } from "./chunks/chunk-TCSV3II7.js";
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+ } from "./chunks/chunk-AJQRKN3X.js";
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  export {
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  version
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  };
package/dist/viewport.js CHANGED
@@ -5,10 +5,10 @@ import {
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  screenToLayout,
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  viewportOf,
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  zoomAbout
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- } from "./chunks/chunk-FBPAX5K6.js";
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- import "./chunks/chunk-HTF32WSW.js";
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+ } from "./chunks/chunk-F4CDC72I.js";
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+ import "./chunks/chunk-XKPXOIWD.js";
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  import "./chunks/chunk-OPPVSPEF.js";
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- import "./chunks/chunk-3PZSBNLI.js";
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+ import "./chunks/chunk-ZZZ6NVLW.js";
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  import "./chunks/chunk-CKUVEHSS.js";
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  import "./chunks/chunk-VPE4AYP7.js";
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  import "./chunks/chunk-TUMJNAOL.js";
@@ -21,7 +21,7 @@ import "./chunks/chunk-LG2UK4MB.js";
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  import "./chunks/chunk-2VMKQKVO.js";
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  import "./chunks/chunk-HKYXWZQS.js";
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  import "./chunks/chunk-34BOZKIE.js";
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- import "./chunks/chunk-5NZRT7GL.js";
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+ import "./chunks/chunk-P276TWPM.js";
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  import "./chunks/chunk-TLWXLNLY.js";
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  import "./chunks/chunk-3YBP46PB.js";
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  import "./chunks/chunk-VACK24HF.js";
package/dist/walkEncoding.js CHANGED
@@ -9,19 +9,19 @@ import {
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  schemeColor,
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  schemeCss,
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  schemeRgb
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- } from "./chunks/chunk-I5SGYTRM.js";
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- import "./chunks/chunk-VB4IXIPM.js";
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+ } from "./chunks/chunk-6RB5ZQ34.js";
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+ import "./chunks/chunk-VXKL2ZLR.js";
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  import "./chunks/chunk-G2FD7S3C.js";
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  import "./chunks/chunk-GQZVR5DW.js";
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- import "./chunks/chunk-XTF2VWJN.js";
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- import "./chunks/chunk-3UGWYQNY.js";
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+ import "./chunks/chunk-33KUO34R.js";
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+ import "./chunks/chunk-GD6RUZU5.js";
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  import "./chunks/chunk-ZANALBSX.js";
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  import "./chunks/chunk-VX656OAZ.js";
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- import "./chunks/chunk-FU57ZNRQ.js";
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+ import "./chunks/chunk-N73RA4DR.js";
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  import "./chunks/chunk-HMXCN6PG.js";
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  import "./chunks/chunk-AB35TJST.js";
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  import "./chunks/chunk-2VMKQKVO.js";
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- import "./chunks/chunk-5NZRT7GL.js";
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+ import "./chunks/chunk-P276TWPM.js";
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  import "./chunks/chunk-TLWXLNLY.js";
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  import "./chunks/chunk-3YBP46PB.js";
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  import "./chunks/chunk-VACK24HF.js";
package/dist/walkHighlight.js CHANGED
@@ -2,21 +2,21 @@ import {
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  facetLifts,
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  walkHighlight,
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  walkLift
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- } from "./chunks/chunk-APLWFV4I.js";
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- import "./chunks/chunk-I5SGYTRM.js";
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- import "./chunks/chunk-VB4IXIPM.js";
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+ } from "./chunks/chunk-Z4HXW6ZH.js";
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+ import "./chunks/chunk-6RB5ZQ34.js";
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+ import "./chunks/chunk-VXKL2ZLR.js";
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  import "./chunks/chunk-G2FD7S3C.js";
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  import "./chunks/chunk-GQZVR5DW.js";
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- import "./chunks/chunk-XTF2VWJN.js";
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- import "./chunks/chunk-3UGWYQNY.js";
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+ import "./chunks/chunk-33KUO34R.js";
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+ import "./chunks/chunk-GD6RUZU5.js";
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  import "./chunks/chunk-ZANALBSX.js";
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  import "./chunks/chunk-VX656OAZ.js";
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  import "./chunks/chunk-LG2UK4MB.js";
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- import "./chunks/chunk-FU57ZNRQ.js";
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+ import "./chunks/chunk-N73RA4DR.js";
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  import "./chunks/chunk-HMXCN6PG.js";
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  import "./chunks/chunk-AB35TJST.js";
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  import "./chunks/chunk-2VMKQKVO.js";
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- import "./chunks/chunk-5NZRT7GL.js";
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+ import "./chunks/chunk-P276TWPM.js";
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  import "./chunks/chunk-TLWXLNLY.js";
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  import "./chunks/chunk-3YBP46PB.js";
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package/dist/walkKey.js CHANGED
@@ -2,13 +2,13 @@ import {
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  rangeText,
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  walkKey,
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  walkPosition
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- } from "./chunks/chunk-UV2IJMIG.js";
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+ } from "./chunks/chunk-SG7VQB4F.js";
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  import "./chunks/chunk-LG2UK4MB.js";
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- import "./chunks/chunk-FU57ZNRQ.js";
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+ import "./chunks/chunk-N73RA4DR.js";
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  import "./chunks/chunk-HMXCN6PG.js";
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  import "./chunks/chunk-AB35TJST.js";
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  import "./chunks/chunk-2VMKQKVO.js";
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- import "./chunks/chunk-5NZRT7GL.js";
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+ import "./chunks/chunk-P276TWPM.js";
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  import "./chunks/chunk-TLWXLNLY.js";
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  import "./chunks/chunk-3YBP46PB.js";
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package/package.json CHANGED
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  {
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  "name": "@jbrowse/bandage-core",
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- "version": "11.7.1",
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+ "version": "11.7.3",
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  "description": "Pangenome graph layout and drawing with no host: GFA in, the Bandage force-directed engine and reference-anchored layouts, a Canvas2D renderer, hit testing and labels out",
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  "license": "GPL-3.0-or-later",
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  "repository": {