@jbrowse/bandage-core 11.5.0 → 11.6.1

This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
Files changed (138) hide show
  1. package/dist/alleleProjection/projectAlleles.js +1 -1
  2. package/dist/bubbles/bubbleHalos.js +9 -6
  3. package/dist/bubbles/classifyBubble.js +8 -5
  4. package/dist/bubbles/popBubble.js +3 -3
  5. package/dist/bubbles/superbubbles.js +11 -11
  6. package/dist/chunks/{chunk-FFHJGWDK.js → chunk-2C5SATRZ.js} +5 -5
  7. package/dist/chunks/{chunk-4XWZNPQ2.js → chunk-2JL2JVZ2.js} +1 -1
  8. package/dist/chunks/{chunk-BZFOFC4D.js → chunk-2VMKQKVO.js} +17 -7
  9. package/dist/chunks/{chunk-HN3WHMPJ.js → chunk-2XEAITWM.js} +15 -5
  10. package/dist/chunks/{chunk-7BTO7MZS.js → chunk-376YFQOY.js} +2 -2
  11. package/dist/chunks/{chunk-K5LDBMLX.js → chunk-3FWNQNF7.js} +1 -1
  12. package/dist/chunks/{chunk-B5X2RLJG.js → chunk-3YBP46PB.js} +27 -2
  13. package/dist/chunks/{chunk-EJRJAAN7.js → chunk-4DMSPNYV.js} +47 -27
  14. package/dist/chunks/{chunk-A32ZKSHN.js → chunk-4WXFQOYV.js} +5 -5
  15. package/dist/chunks/{chunk-OMUPUB4J.js → chunk-56L6R6D2.js} +2 -2
  16. package/dist/chunks/{chunk-C44YRP5F.js → chunk-5OJZV6YT.js} +3 -2
  17. package/dist/chunks/{chunk-234NFZS4.js → chunk-5ORP7EFJ.js} +1 -1
  18. package/dist/chunks/{chunk-J3JODFDF.js → chunk-5WB7O7IT.js} +3 -3
  19. package/dist/chunks/{chunk-3VCKBSML.js → chunk-6YRSOL4K.js} +2 -2
  20. package/dist/chunks/{chunk-WG5D2H7X.js → chunk-7OTWJQGA.js} +10 -10
  21. package/dist/chunks/{chunk-77EGQQJU.js → chunk-BFUS3ENH.js} +2 -2
  22. package/dist/chunks/{chunk-TGUFT6KK.js → chunk-BLUEFYIR.js} +4 -1
  23. package/dist/chunks/{chunk-3BCVMZUT.js → chunk-BVWMVWLJ.js} +10 -10
  24. package/dist/chunks/{chunk-3GP3KT5L.js → chunk-BW2NMXRV.js} +5 -5
  25. package/dist/chunks/{chunk-2E25TX4G.js → chunk-C6E6HXP5.js} +4 -4
  26. package/dist/chunks/{chunk-5I3K4R2G.js → chunk-CFXXFHRK.js} +2 -1
  27. package/dist/chunks/{chunk-JMABOQWL.js → chunk-CO6RGQAD.js} +1 -6
  28. package/dist/chunks/{chunk-64FCX424.js → chunk-D3E7AXBB.js} +40 -9
  29. package/dist/chunks/{chunk-CGMSKIEO.js → chunk-DV5B5UU7.js} +55 -8
  30. package/dist/chunks/{chunk-G6UIYQZR.js → chunk-EQDQ7P4Y.js} +3 -2
  31. package/dist/chunks/{chunk-VQ7474EH.js → chunk-EVXXFMZ7.js} +8 -7
  32. package/dist/chunks/{chunk-AKLSY4GD.js → chunk-F3KQQDKP.js} +1 -1
  33. package/dist/chunks/{chunk-6EOB6ANX.js → chunk-GZ36HNPJ.js} +1 -1
  34. package/dist/chunks/{chunk-3U3C4PRK.js → chunk-HV35LDYH.js} +3 -3
  35. package/dist/chunks/{chunk-JOWKKQAL.js → chunk-JGHZ3N34.js} +14 -9
  36. package/dist/chunks/{chunk-D4ZFRBB4.js → chunk-JGQQAUVL.js} +3 -3
  37. package/dist/chunks/{chunk-PSCSZSVK.js → chunk-KA4F3N55.js} +4 -4
  38. package/dist/chunks/{chunk-SOMZGDVS.js → chunk-KJDERUQF.js} +1 -1
  39. package/dist/chunks/{chunk-E4ZM4OOJ.js → chunk-KZMSSPS6.js} +2 -2
  40. package/dist/chunks/{chunk-IOWLTUEB.js → chunk-MEVTV4FI.js} +1 -1
  41. package/dist/chunks/{chunk-PNMJFFNB.js → chunk-MHZTTLBU.js} +1 -1
  42. package/dist/chunks/{chunk-TRGKMLXT.js → chunk-MXLYBDOX.js} +14 -13
  43. package/dist/chunks/{chunk-RK3HRRCW.js → chunk-NXBW6KY6.js} +6 -7
  44. package/dist/chunks/{chunk-WC6HX6GJ.js → chunk-OUM54ZSQ.js} +2 -2
  45. package/dist/chunks/{chunk-WA5WNP6V.js → chunk-OYCQVJYY.js} +1 -1
  46. package/dist/chunks/{chunk-FWSERUJV.js → chunk-P5PBJONQ.js} +1 -1
  47. package/dist/chunks/{chunk-JOLLU34X.js → chunk-PQIFYQVI.js} +1 -1
  48. package/dist/chunks/{chunk-EGBBIXTG.js → chunk-QCOVHLJO.js} +1 -1
  49. package/dist/chunks/{chunk-5F4D35U5.js → chunk-QD35GH4C.js} +3 -3
  50. package/dist/chunks/{chunk-XKZ56L5A.js → chunk-RLCYVZ4B.js} +1 -1
  51. package/dist/chunks/{chunk-PQBALYSO.js → chunk-ROLACYCO.js} +16 -16
  52. package/dist/chunks/{chunk-A7H753BA.js → chunk-SDI6BVG7.js} +5 -6
  53. package/dist/chunks/{chunk-A4JDEUAI.js → chunk-SNF2MIEF.js} +1 -1
  54. package/dist/chunks/{chunk-NMWQUFPF.js → chunk-SVVFWTG4.js} +2 -2
  55. package/dist/chunks/{chunk-PFRQBCGC.js → chunk-T3H5ELLA.js} +4 -4
  56. package/dist/chunks/{chunk-WLR4KJVI.js → chunk-TXTSE44S.js} +1 -1
  57. package/dist/chunks/{chunk-UBQSRCWR.js → chunk-VACK24HF.js} +43 -3
  58. package/dist/chunks/{chunk-HSVFCA2J.js → chunk-VO6FKNZE.js} +1 -1
  59. package/dist/chunks/{chunk-NJGYLYU7.js → chunk-W2YAW36J.js} +1 -1
  60. package/dist/chunks/{chunk-VD4MLYEK.js → chunk-WI6SUU5B.js} +2 -2
  61. package/dist/chunks/{chunk-GJU6BJJA.js → chunk-XR2HMGAS.js} +1 -1
  62. package/dist/chunks/{chunk-KOJKFNCW.js → chunk-XXOBCANT.js} +26 -12
  63. package/dist/chunks/{chunk-7EDGWT67.js → chunk-YEYQFNFQ.js} +1 -1
  64. package/dist/chunks/{chunk-UFUSPK2A.js → chunk-YYIU7P73.js} +4 -1
  65. package/dist/chunks/{chunk-CRCD3ODN.js → chunk-ZANALBSX.js} +11 -3
  66. package/dist/cli/figure.js +51 -46
  67. package/dist/cli/fold.js +11 -11
  68. package/dist/deletionEdges.js +5 -2
  69. package/dist/facetGrid.js +2 -2
  70. package/dist/figure.js +35 -35
  71. package/dist/figureData.js +37 -37
  72. package/dist/figureScene.js +25 -25
  73. package/dist/figureSettings.js +11 -11
  74. package/dist/foldVariants.js +2 -2
  75. package/dist/gaf/parseGaf.js +1 -1
  76. package/dist/gbzCut.js +4 -4
  77. package/dist/gbzWindow.js +3 -3
  78. package/dist/genes/backboneGenes.js +4 -4
  79. package/dist/genes/geneFiles.js +1 -1
  80. package/dist/genes/genePins.js +3 -3
  81. package/dist/gfa/gfaConverter.js +4 -4
  82. package/dist/gfa/graphTables.js +2 -2
  83. package/dist/gfa-core/gfaParser.js +1 -1
  84. package/dist/gfa-core/index.js +1 -1
  85. package/dist/graphLabels.js +7 -4
  86. package/dist/index.js +62 -62
  87. package/dist/labelLayout.js +11 -8
  88. package/dist/layout/anchoredLayout.js +1 -1
  89. package/dist/layout/forceCache.js +11 -11
  90. package/dist/layout/mergeRuns.js +2 -2
  91. package/dist/layout/placeOffReference.js +1 -1
  92. package/dist/layout/sampleRowLayout.js +2 -2
  93. package/dist/layout/trimToWindow.js +2 -2
  94. package/dist/layout/tubeMapLayout.js +14 -14
  95. package/dist/layout/walkRowDraw.js +12 -12
  96. package/dist/layout/walkRowLayout.js +7 -7
  97. package/dist/layout/walkRowLinks.js +1 -1
  98. package/dist/layout/walkRowRuns.js +4 -4
  99. package/dist/layout/walkRows.js +5 -5
  100. package/dist/layout/walkStrip.js +17 -17
  101. package/dist/layoutEngines.js +1 -1
  102. package/dist/layoutModes.js +17 -17
  103. package/dist/locus.js +1 -1
  104. package/dist/nodeWidths.js +5 -3
  105. package/dist/pansn.js +1 -1
  106. package/dist/pathAnchoring.js +4 -2
  107. package/dist/pathColors.js +8 -8
  108. package/dist/pipeline.js +10 -10
  109. package/dist/reference.js +2 -2
  110. package/dist/referenceStrip.js +12 -12
  111. package/dist/renderer/Canvas2DRenderer.js +1 -1
  112. package/dist/renderer/GeometryBuilder.js +11 -11
  113. package/dist/tubeMap/axis.js +8 -5
  114. package/dist/tubeMap/bundle.js +15 -15
  115. package/dist/tubeMap/coarsen.js +15 -15
  116. package/dist/tubeMap/deviations.js +18 -18
  117. package/dist/tubeMap/draw.js +10 -8
  118. package/dist/tubeMap/genes.js +9 -6
  119. package/dist/tubeMap/nodeColors.js +12 -12
  120. package/dist/tubeMap/reads.js +4 -4
  121. package/dist/types/figureData.d.ts +12 -0
  122. package/dist/types/gaf/parseGaf.d.ts +1 -1
  123. package/dist/types/nodeWidths.d.ts +2 -1
  124. package/dist/types/pathAnchoring.d.ts +2 -0
  125. package/dist/types/renderer/Canvas2DRenderer.d.ts +2 -0
  126. package/dist/types/tubeMap/reads.d.ts +0 -1
  127. package/dist/types/util/geometry.d.ts +7 -1
  128. package/dist/types/version.d.ts +1 -1
  129. package/dist/util/SpatialIndex.js +7 -4
  130. package/dist/util/edgeCurves.js +6 -3
  131. package/dist/util/geometry.js +1 -1
  132. package/dist/util/hitDetection.js +8 -5
  133. package/dist/version.js +1 -1
  134. package/dist/viewport.js +11 -11
  135. package/dist/walkEncoding.js +12 -12
  136. package/dist/walkHighlight.js +13 -13
  137. package/dist/walkKey.js +8 -5
  138. package/package.json +1 -1
package/dist/cli/figure.js CHANGED
@@ -4,41 +4,41 @@ import {
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  } from "../chunks/chunk-O4EGE27I.js";
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  import {
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  backboneGenes
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- } from "../chunks/chunk-7BTO7MZS.js";
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- import "../chunks/chunk-G6UIYQZR.js";
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+ } from "../chunks/chunk-376YFQOY.js";
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+ import "../chunks/chunk-EQDQ7P4Y.js";
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  import {
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  figureSvg
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- } from "../chunks/chunk-PQBALYSO.js";
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- import "../chunks/chunk-A32ZKSHN.js";
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- import "../chunks/chunk-EJRJAAN7.js";
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+ } from "../chunks/chunk-ROLACYCO.js";
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+ import "../chunks/chunk-4WXFQOYV.js";
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+ import "../chunks/chunk-4DMSPNYV.js";
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  import "../chunks/chunk-RBCE2OQH.js";
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  import "../chunks/chunk-V4YML3GR.js";
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  import {
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  genesOnRow,
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  placeRowGenes
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- } from "../chunks/chunk-TRGKMLXT.js";
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+ } from "../chunks/chunk-MXLYBDOX.js";
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  import "../chunks/chunk-JSUCGZ6K.js";
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- import "../chunks/chunk-PSCSZSVK.js";
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- import "../chunks/chunk-OMUPUB4J.js";
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- import "../chunks/chunk-3VCKBSML.js";
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+ import "../chunks/chunk-KA4F3N55.js";
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+ import "../chunks/chunk-56L6R6D2.js";
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+ import "../chunks/chunk-6YRSOL4K.js";
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  import "../chunks/chunk-H2H4Y3TV.js";
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  import {
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  laidOutGraph,
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  walkLayers
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- } from "../chunks/chunk-KOJKFNCW.js";
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+ } from "../chunks/chunk-XXOBCANT.js";
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  import {
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  LAYOUT_ENGINE_VALUES,
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  isLayoutEngineKind
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- } from "../chunks/chunk-JMABOQWL.js";
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+ } from "../chunks/chunk-CO6RGQAD.js";
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  import {
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  LAYOUT_MODES
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- } from "../chunks/chunk-5F4D35U5.js";
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- import "../chunks/chunk-RK3HRRCW.js";
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- import "../chunks/chunk-A7H753BA.js";
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- import "../chunks/chunk-GJU6BJJA.js";
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+ } from "../chunks/chunk-QD35GH4C.js";
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+ import "../chunks/chunk-NXBW6KY6.js";
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+ import "../chunks/chunk-SDI6BVG7.js";
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+ import "../chunks/chunk-XR2HMGAS.js";
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  import "../chunks/chunk-GJLZ2MKE.js";
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  import "../chunks/chunk-MYLAJDKB.js";
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- import "../chunks/chunk-C44YRP5F.js";
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+ import "../chunks/chunk-5OJZV6YT.js";
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  import "../chunks/chunk-UAFATXYA.js";
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  import "../chunks/chunk-3GLG3ZLE.js";
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  import {
@@ -47,60 +47,60 @@ import {
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  haplotypeIndexBeside,
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  openGbz,
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  parseRegion
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- } from "../chunks/chunk-J3JODFDF.js";
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- import "../chunks/chunk-NMWQUFPF.js";
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+ } from "../chunks/chunk-5WB7O7IT.js";
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+ import "../chunks/chunk-SVVFWTG4.js";
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  import "../chunks/chunk-HNWJ4B7S.js";
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- import "../chunks/chunk-77EGQQJU.js";
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- import "../chunks/chunk-WLR4KJVI.js";
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- import "../chunks/chunk-XKZ56L5A.js";
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- import "../chunks/chunk-3BCVMZUT.js";
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+ import "../chunks/chunk-BFUS3ENH.js";
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+ import "../chunks/chunk-TXTSE44S.js";
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+ import "../chunks/chunk-RLCYVZ4B.js";
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+ import "../chunks/chunk-BVWMVWLJ.js";
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  import "../chunks/chunk-LOCJN3BZ.js";
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- import "../chunks/chunk-VQ7474EH.js";
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- import "../chunks/chunk-HN3WHMPJ.js";
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- import "../chunks/chunk-JOWKKQAL.js";
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+ import "../chunks/chunk-EVXXFMZ7.js";
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+ import "../chunks/chunk-2XEAITWM.js";
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+ import "../chunks/chunk-JGHZ3N34.js";
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  import "../chunks/chunk-G2FD7S3C.js";
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- import "../chunks/chunk-D4ZFRBB4.js";
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+ import "../chunks/chunk-JGQQAUVL.js";
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  import "../chunks/chunk-GQZVR5DW.js";
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- import "../chunks/chunk-WA5WNP6V.js";
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- import "../chunks/chunk-FWSERUJV.js";
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+ import "../chunks/chunk-OYCQVJYY.js";
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+ import "../chunks/chunk-P5PBJONQ.js";
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  import {
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  walkRows
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- } from "../chunks/chunk-IOWLTUEB.js";
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- import "../chunks/chunk-64FCX424.js";
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- import "../chunks/chunk-3GP3KT5L.js";
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- import "../chunks/chunk-CRCD3ODN.js";
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- import "../chunks/chunk-K5LDBMLX.js";
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- import "../chunks/chunk-WG5D2H7X.js";
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+ } from "../chunks/chunk-MEVTV4FI.js";
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+ import "../chunks/chunk-D3E7AXBB.js";
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+ import "../chunks/chunk-BW2NMXRV.js";
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+ import "../chunks/chunk-ZANALBSX.js";
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+ import "../chunks/chunk-3FWNQNF7.js";
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+ import "../chunks/chunk-7OTWJQGA.js";
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  import "../chunks/chunk-OPPVSPEF.js";
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  import "../chunks/chunk-3PZSBNLI.js";
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  import "../chunks/chunk-CKUVEHSS.js";
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  import "../chunks/chunk-VPE4AYP7.js";
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- import "../chunks/chunk-FFHJGWDK.js";
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+ import "../chunks/chunk-2C5SATRZ.js";
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  import "../chunks/chunk-QYBZZI5H.js";
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- import "../chunks/chunk-5I3K4R2G.js";
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- import "../chunks/chunk-NJGYLYU7.js";
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- import "../chunks/chunk-B5X2RLJG.js";
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+ import "../chunks/chunk-CFXXFHRK.js";
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+ import "../chunks/chunk-W2YAW36J.js";
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  import "../chunks/chunk-VX656OAZ.js";
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- import "../chunks/chunk-234NFZS4.js";
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+ import "../chunks/chunk-5ORP7EFJ.js";
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  import "../chunks/chunk-DZR37KXT.js";
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  import "../chunks/chunk-EIY2SKD3.js";
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- import "../chunks/chunk-ZPZ7GNBT.js";
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- import "../chunks/chunk-PFRQBCGC.js";
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+ import "../chunks/chunk-T3H5ELLA.js";
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  import "../chunks/chunk-HMXCN6PG.js";
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  import "../chunks/chunk-AB35TJST.js";
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- import "../chunks/chunk-BZFOFC4D.js";
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+ import "../chunks/chunk-2VMKQKVO.js";
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  import "../chunks/chunk-HKYXWZQS.js";
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  import "../chunks/chunk-34BOZKIE.js";
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  import "../chunks/chunk-JKJWSY4V.js";
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- import "../chunks/chunk-CGMSKIEO.js";
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- import "../chunks/chunk-UBQSRCWR.js";
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+ import "../chunks/chunk-DV5B5UU7.js";
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+ import "../chunks/chunk-3YBP46PB.js";
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+ import "../chunks/chunk-VACK24HF.js";
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  import "../chunks/chunk-CPMHA4W5.js";
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+ import "../chunks/chunk-ZPZ7GNBT.js";
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  import "../chunks/chunk-BSOZW3FC.js";
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  import "../chunks/chunk-RJWPJCIB.js";
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  import "../chunks/chunk-HOAIOEI7.js";
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- import "../chunks/chunk-TGUFT6KK.js";
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- import "../chunks/chunk-4XWZNPQ2.js";
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+ import "../chunks/chunk-BLUEFYIR.js";
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+ import "../chunks/chunk-2JL2JVZ2.js";
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  // src/cli/figure.ts
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  import { access, open, readFile, writeFile } from "node:fs/promises";
@@ -115,6 +115,11 @@ function byteSource(location) {
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+ if (res.status !== 206) {
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+ throw new Error(
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+ `${location} ignored the Range request (HTTP ${res.status})`
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+ );
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+ }
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  return new Uint8Array(await res.arrayBuffer());
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package/dist/cli/fold.js CHANGED
@@ -7,33 +7,33 @@ import {
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  } from "../chunks/chunk-O4EGE27I.js";
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  import {
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  foldVariants
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- } from "../chunks/chunk-SOMZGDVS.js";
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+ } from "../chunks/chunk-KJDERUQF.js";
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  import {
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- } from "../chunks/chunk-WG5D2H7X.js";
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+ } from "../chunks/chunk-7OTWJQGA.js";
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  import "../chunks/chunk-OPPVSPEF.js";
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  import "../chunks/chunk-3PZSBNLI.js";
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  import "../chunks/chunk-CKUVEHSS.js";
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  import "../chunks/chunk-VPE4AYP7.js";
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- import "../chunks/chunk-FFHJGWDK.js";
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+ import "../chunks/chunk-2C5SATRZ.js";
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  import "../chunks/chunk-QYBZZI5H.js";
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- import "../chunks/chunk-5I3K4R2G.js";
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- import "../chunks/chunk-NJGYLYU7.js";
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- import "../chunks/chunk-B5X2RLJG.js";
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+ import "../chunks/chunk-CFXXFHRK.js";
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+ import "../chunks/chunk-W2YAW36J.js";
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  import "../chunks/chunk-VX656OAZ.js";
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  import "../chunks/chunk-DZR37KXT.js";
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  import "../chunks/chunk-EIY2SKD3.js";
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- import "../chunks/chunk-ZPZ7GNBT.js";
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- import "../chunks/chunk-BZFOFC4D.js";
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+ import "../chunks/chunk-2VMKQKVO.js";
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  import "../chunks/chunk-HKYXWZQS.js";
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  import "../chunks/chunk-34BOZKIE.js";
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- import "../chunks/chunk-CGMSKIEO.js";
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- import "../chunks/chunk-UBQSRCWR.js";
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+ import "../chunks/chunk-DV5B5UU7.js";
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+ import "../chunks/chunk-3YBP46PB.js";
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+ import "../chunks/chunk-VACK24HF.js";
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+ import "../chunks/chunk-ZPZ7GNBT.js";
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- import "../chunks/chunk-4XWZNPQ2.js";
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+ import "../chunks/chunk-2JL2JVZ2.js";
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package/dist/deletionEdges.js CHANGED
@@ -3,12 +3,15 @@ import {
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  deletionEdges,
5
5
  edgeCurvesOf
6
- } from "./chunks/chunk-CGMSKIEO.js";
7
- import "./chunks/chunk-UBQSRCWR.js";
6
+ } from "./chunks/chunk-DV5B5UU7.js";
7
+ import "./chunks/chunk-3YBP46PB.js";
8
+ import "./chunks/chunk-VACK24HF.js";
8
9
  import "./chunks/chunk-CPMHA4W5.js";
10
+ import "./chunks/chunk-ZPZ7GNBT.js";
9
11
  import "./chunks/chunk-BSOZW3FC.js";
10
12
  import "./chunks/chunk-RJWPJCIB.js";
11
13
  import "./chunks/chunk-HOAIOEI7.js";
14
+ import "./chunks/chunk-2JL2JVZ2.js";
12
15
  export {
13
16
  closableDeletions,
14
17
  deletionDrawing,
package/dist/facetGrid.js CHANGED
@@ -6,8 +6,8 @@ import {
6
6
  facetCells,
7
7
  facetGrid,
8
8
  facetSettingOf
9
- } from "./chunks/chunk-TGUFT6KK.js";
10
- import "./chunks/chunk-4XWZNPQ2.js";
9
+ } from "./chunks/chunk-BLUEFYIR.js";
10
+ import "./chunks/chunk-2JL2JVZ2.js";
11
11
  export {
12
12
  FACET_FIELDS,
13
13
  FACET_GAP_PX,
package/dist/figure.js CHANGED
@@ -1,64 +1,64 @@
1
1
  import {
2
2
  figureSvg
3
- } from "./chunks/chunk-PQBALYSO.js";
4
- import "./chunks/chunk-A32ZKSHN.js";
5
- import "./chunks/chunk-EJRJAAN7.js";
3
+ } from "./chunks/chunk-ROLACYCO.js";
4
+ import "./chunks/chunk-4WXFQOYV.js";
5
+ import "./chunks/chunk-4DMSPNYV.js";
6
6
  import "./chunks/chunk-RBCE2OQH.js";
7
7
  import "./chunks/chunk-V4YML3GR.js";
8
- import "./chunks/chunk-TRGKMLXT.js";
8
+ import "./chunks/chunk-MXLYBDOX.js";
9
9
  import "./chunks/chunk-JSUCGZ6K.js";
10
- import "./chunks/chunk-PSCSZSVK.js";
11
- import "./chunks/chunk-OMUPUB4J.js";
12
- import "./chunks/chunk-3VCKBSML.js";
10
+ import "./chunks/chunk-KA4F3N55.js";
11
+ import "./chunks/chunk-56L6R6D2.js";
12
+ import "./chunks/chunk-6YRSOL4K.js";
13
13
  import "./chunks/chunk-H2H4Y3TV.js";
14
- import "./chunks/chunk-77EGQQJU.js";
15
- import "./chunks/chunk-WLR4KJVI.js";
16
- import "./chunks/chunk-XKZ56L5A.js";
17
- import "./chunks/chunk-3BCVMZUT.js";
14
+ import "./chunks/chunk-BFUS3ENH.js";
15
+ import "./chunks/chunk-TXTSE44S.js";
16
+ import "./chunks/chunk-RLCYVZ4B.js";
17
+ import "./chunks/chunk-BVWMVWLJ.js";
18
18
  import "./chunks/chunk-LOCJN3BZ.js";
19
- import "./chunks/chunk-VQ7474EH.js";
20
- import "./chunks/chunk-HN3WHMPJ.js";
21
- import "./chunks/chunk-JOWKKQAL.js";
19
+ import "./chunks/chunk-EVXXFMZ7.js";
20
+ import "./chunks/chunk-2XEAITWM.js";
21
+ import "./chunks/chunk-JGHZ3N34.js";
22
22
  import "./chunks/chunk-G2FD7S3C.js";
23
- import "./chunks/chunk-D4ZFRBB4.js";
23
+ import "./chunks/chunk-JGQQAUVL.js";
24
24
  import "./chunks/chunk-GQZVR5DW.js";
25
- import "./chunks/chunk-WA5WNP6V.js";
26
- import "./chunks/chunk-FWSERUJV.js";
27
- import "./chunks/chunk-IOWLTUEB.js";
28
- import "./chunks/chunk-64FCX424.js";
29
- import "./chunks/chunk-3GP3KT5L.js";
30
- import "./chunks/chunk-CRCD3ODN.js";
31
- import "./chunks/chunk-K5LDBMLX.js";
32
- import "./chunks/chunk-WG5D2H7X.js";
25
+ import "./chunks/chunk-OYCQVJYY.js";
26
+ import "./chunks/chunk-P5PBJONQ.js";
27
+ import "./chunks/chunk-MEVTV4FI.js";
28
+ import "./chunks/chunk-D3E7AXBB.js";
29
+ import "./chunks/chunk-BW2NMXRV.js";
30
+ import "./chunks/chunk-ZANALBSX.js";
31
+ import "./chunks/chunk-3FWNQNF7.js";
32
+ import "./chunks/chunk-7OTWJQGA.js";
33
33
  import "./chunks/chunk-OPPVSPEF.js";
34
34
  import "./chunks/chunk-3PZSBNLI.js";
35
35
  import "./chunks/chunk-CKUVEHSS.js";
36
36
  import "./chunks/chunk-VPE4AYP7.js";
37
- import "./chunks/chunk-FFHJGWDK.js";
37
+ import "./chunks/chunk-2C5SATRZ.js";
38
38
  import "./chunks/chunk-QYBZZI5H.js";
39
- import "./chunks/chunk-5I3K4R2G.js";
40
- import "./chunks/chunk-NJGYLYU7.js";
41
- import "./chunks/chunk-B5X2RLJG.js";
39
+ import "./chunks/chunk-CFXXFHRK.js";
40
+ import "./chunks/chunk-W2YAW36J.js";
42
41
  import "./chunks/chunk-VX656OAZ.js";
43
- import "./chunks/chunk-234NFZS4.js";
42
+ import "./chunks/chunk-5ORP7EFJ.js";
44
43
  import "./chunks/chunk-DZR37KXT.js";
45
44
  import "./chunks/chunk-EIY2SKD3.js";
46
- import "./chunks/chunk-ZPZ7GNBT.js";
47
- import "./chunks/chunk-PFRQBCGC.js";
45
+ import "./chunks/chunk-T3H5ELLA.js";
48
46
  import "./chunks/chunk-HMXCN6PG.js";
49
47
  import "./chunks/chunk-AB35TJST.js";
50
- import "./chunks/chunk-BZFOFC4D.js";
48
+ import "./chunks/chunk-2VMKQKVO.js";
51
49
  import "./chunks/chunk-HKYXWZQS.js";
52
50
  import "./chunks/chunk-34BOZKIE.js";
53
51
  import "./chunks/chunk-JKJWSY4V.js";
54
- import "./chunks/chunk-CGMSKIEO.js";
55
- import "./chunks/chunk-UBQSRCWR.js";
52
+ import "./chunks/chunk-DV5B5UU7.js";
53
+ import "./chunks/chunk-3YBP46PB.js";
54
+ import "./chunks/chunk-VACK24HF.js";
56
55
  import "./chunks/chunk-CPMHA4W5.js";
56
+ import "./chunks/chunk-ZPZ7GNBT.js";
57
57
  import "./chunks/chunk-BSOZW3FC.js";
58
58
  import "./chunks/chunk-RJWPJCIB.js";
59
59
  import "./chunks/chunk-HOAIOEI7.js";
60
- import "./chunks/chunk-TGUFT6KK.js";
61
- import "./chunks/chunk-4XWZNPQ2.js";
60
+ import "./chunks/chunk-BLUEFYIR.js";
61
+ import "./chunks/chunk-2JL2JVZ2.js";
62
62
  export {
63
63
  figureSvg
64
64
  };
package/dist/figureData.js CHANGED
@@ -3,68 +3,68 @@ import {
3
3
  gfaFigureData,
4
4
  laidOutGraph,
5
5
  walkLayers
6
- } from "./chunks/chunk-KOJKFNCW.js";
7
- import "./chunks/chunk-JMABOQWL.js";
8
- import "./chunks/chunk-5F4D35U5.js";
9
- import "./chunks/chunk-RK3HRRCW.js";
10
- import "./chunks/chunk-A7H753BA.js";
11
- import "./chunks/chunk-GJU6BJJA.js";
6
+ } from "./chunks/chunk-XXOBCANT.js";
7
+ import "./chunks/chunk-CO6RGQAD.js";
8
+ import "./chunks/chunk-QD35GH4C.js";
9
+ import "./chunks/chunk-NXBW6KY6.js";
10
+ import "./chunks/chunk-SDI6BVG7.js";
11
+ import "./chunks/chunk-XR2HMGAS.js";
12
12
  import "./chunks/chunk-GJLZ2MKE.js";
13
13
  import "./chunks/chunk-MYLAJDKB.js";
14
- import "./chunks/chunk-C44YRP5F.js";
14
+ import "./chunks/chunk-5OJZV6YT.js";
15
15
  import "./chunks/chunk-UAFATXYA.js";
16
16
  import "./chunks/chunk-3GLG3ZLE.js";
17
- import "./chunks/chunk-J3JODFDF.js";
18
- import "./chunks/chunk-NMWQUFPF.js";
17
+ import "./chunks/chunk-5WB7O7IT.js";
18
+ import "./chunks/chunk-SVVFWTG4.js";
19
19
  import "./chunks/chunk-HNWJ4B7S.js";
20
- import "./chunks/chunk-77EGQQJU.js";
21
- import "./chunks/chunk-WLR4KJVI.js";
22
- import "./chunks/chunk-XKZ56L5A.js";
23
- import "./chunks/chunk-3BCVMZUT.js";
20
+ import "./chunks/chunk-BFUS3ENH.js";
21
+ import "./chunks/chunk-TXTSE44S.js";
22
+ import "./chunks/chunk-RLCYVZ4B.js";
23
+ import "./chunks/chunk-BVWMVWLJ.js";
24
24
  import "./chunks/chunk-LOCJN3BZ.js";
25
- import "./chunks/chunk-VQ7474EH.js";
26
- import "./chunks/chunk-HN3WHMPJ.js";
27
- import "./chunks/chunk-JOWKKQAL.js";
25
+ import "./chunks/chunk-EVXXFMZ7.js";
26
+ import "./chunks/chunk-2XEAITWM.js";
27
+ import "./chunks/chunk-JGHZ3N34.js";
28
28
  import "./chunks/chunk-G2FD7S3C.js";
29
- import "./chunks/chunk-D4ZFRBB4.js";
29
+ import "./chunks/chunk-JGQQAUVL.js";
30
30
  import "./chunks/chunk-GQZVR5DW.js";
31
- import "./chunks/chunk-WA5WNP6V.js";
32
- import "./chunks/chunk-FWSERUJV.js";
33
- import "./chunks/chunk-IOWLTUEB.js";
34
- import "./chunks/chunk-64FCX424.js";
35
- import "./chunks/chunk-3GP3KT5L.js";
36
- import "./chunks/chunk-CRCD3ODN.js";
37
- import "./chunks/chunk-K5LDBMLX.js";
38
- import "./chunks/chunk-WG5D2H7X.js";
31
+ import "./chunks/chunk-OYCQVJYY.js";
32
+ import "./chunks/chunk-P5PBJONQ.js";
33
+ import "./chunks/chunk-MEVTV4FI.js";
34
+ import "./chunks/chunk-D3E7AXBB.js";
35
+ import "./chunks/chunk-BW2NMXRV.js";
36
+ import "./chunks/chunk-ZANALBSX.js";
37
+ import "./chunks/chunk-3FWNQNF7.js";
38
+ import "./chunks/chunk-7OTWJQGA.js";
39
39
  import "./chunks/chunk-OPPVSPEF.js";
40
40
  import "./chunks/chunk-3PZSBNLI.js";
41
41
  import "./chunks/chunk-CKUVEHSS.js";
42
42
  import "./chunks/chunk-VPE4AYP7.js";
43
- import "./chunks/chunk-FFHJGWDK.js";
43
+ import "./chunks/chunk-2C5SATRZ.js";
44
44
  import "./chunks/chunk-QYBZZI5H.js";
45
- import "./chunks/chunk-5I3K4R2G.js";
46
- import "./chunks/chunk-NJGYLYU7.js";
47
- import "./chunks/chunk-B5X2RLJG.js";
45
+ import "./chunks/chunk-CFXXFHRK.js";
46
+ import "./chunks/chunk-W2YAW36J.js";
48
47
  import "./chunks/chunk-VX656OAZ.js";
49
- import "./chunks/chunk-234NFZS4.js";
48
+ import "./chunks/chunk-5ORP7EFJ.js";
50
49
  import "./chunks/chunk-DZR37KXT.js";
51
50
  import "./chunks/chunk-EIY2SKD3.js";
52
- import "./chunks/chunk-ZPZ7GNBT.js";
53
- import "./chunks/chunk-PFRQBCGC.js";
51
+ import "./chunks/chunk-T3H5ELLA.js";
54
52
  import "./chunks/chunk-HMXCN6PG.js";
55
53
  import "./chunks/chunk-AB35TJST.js";
56
- import "./chunks/chunk-BZFOFC4D.js";
54
+ import "./chunks/chunk-2VMKQKVO.js";
57
55
  import "./chunks/chunk-HKYXWZQS.js";
58
56
  import "./chunks/chunk-34BOZKIE.js";
59
57
  import "./chunks/chunk-JKJWSY4V.js";
60
- import "./chunks/chunk-CGMSKIEO.js";
61
- import "./chunks/chunk-UBQSRCWR.js";
58
+ import "./chunks/chunk-DV5B5UU7.js";
59
+ import "./chunks/chunk-3YBP46PB.js";
60
+ import "./chunks/chunk-VACK24HF.js";
62
61
  import "./chunks/chunk-CPMHA4W5.js";
62
+ import "./chunks/chunk-ZPZ7GNBT.js";
63
63
  import "./chunks/chunk-BSOZW3FC.js";
64
64
  import "./chunks/chunk-RJWPJCIB.js";
65
65
  import "./chunks/chunk-HOAIOEI7.js";
66
- import "./chunks/chunk-TGUFT6KK.js";
67
- import "./chunks/chunk-4XWZNPQ2.js";
66
+ import "./chunks/chunk-BLUEFYIR.js";
67
+ import "./chunks/chunk-2JL2JVZ2.js";
68
68
  export {
69
69
  figureData,
70
70
  gfaFigureData,
package/dist/figureScene.js CHANGED
@@ -1,50 +1,50 @@
1
1
  import {
2
2
  figureScene
3
- } from "./chunks/chunk-3BCVMZUT.js";
3
+ } from "./chunks/chunk-BVWMVWLJ.js";
4
4
  import "./chunks/chunk-LOCJN3BZ.js";
5
- import "./chunks/chunk-VQ7474EH.js";
6
- import "./chunks/chunk-HN3WHMPJ.js";
7
- import "./chunks/chunk-JOWKKQAL.js";
5
+ import "./chunks/chunk-EVXXFMZ7.js";
6
+ import "./chunks/chunk-2XEAITWM.js";
7
+ import "./chunks/chunk-JGHZ3N34.js";
8
8
  import "./chunks/chunk-G2FD7S3C.js";
9
- import "./chunks/chunk-D4ZFRBB4.js";
9
+ import "./chunks/chunk-JGQQAUVL.js";
10
10
  import "./chunks/chunk-GQZVR5DW.js";
11
- import "./chunks/chunk-WA5WNP6V.js";
12
- import "./chunks/chunk-FWSERUJV.js";
13
- import "./chunks/chunk-IOWLTUEB.js";
14
- import "./chunks/chunk-64FCX424.js";
15
- import "./chunks/chunk-3GP3KT5L.js";
16
- import "./chunks/chunk-CRCD3ODN.js";
17
- import "./chunks/chunk-K5LDBMLX.js";
18
- import "./chunks/chunk-WG5D2H7X.js";
11
+ import "./chunks/chunk-OYCQVJYY.js";
12
+ import "./chunks/chunk-P5PBJONQ.js";
13
+ import "./chunks/chunk-MEVTV4FI.js";
14
+ import "./chunks/chunk-D3E7AXBB.js";
15
+ import "./chunks/chunk-BW2NMXRV.js";
16
+ import "./chunks/chunk-ZANALBSX.js";
17
+ import "./chunks/chunk-3FWNQNF7.js";
18
+ import "./chunks/chunk-7OTWJQGA.js";
19
19
  import "./chunks/chunk-OPPVSPEF.js";
20
20
  import "./chunks/chunk-3PZSBNLI.js";
21
21
  import "./chunks/chunk-CKUVEHSS.js";
22
22
  import "./chunks/chunk-VPE4AYP7.js";
23
- import "./chunks/chunk-FFHJGWDK.js";
23
+ import "./chunks/chunk-2C5SATRZ.js";
24
24
  import "./chunks/chunk-QYBZZI5H.js";
25
- import "./chunks/chunk-5I3K4R2G.js";
26
- import "./chunks/chunk-NJGYLYU7.js";
27
- import "./chunks/chunk-B5X2RLJG.js";
25
+ import "./chunks/chunk-CFXXFHRK.js";
26
+ import "./chunks/chunk-W2YAW36J.js";
28
27
  import "./chunks/chunk-VX656OAZ.js";
29
- import "./chunks/chunk-234NFZS4.js";
28
+ import "./chunks/chunk-5ORP7EFJ.js";
30
29
  import "./chunks/chunk-DZR37KXT.js";
31
30
  import "./chunks/chunk-EIY2SKD3.js";
32
- import "./chunks/chunk-ZPZ7GNBT.js";
33
- import "./chunks/chunk-PFRQBCGC.js";
31
+ import "./chunks/chunk-T3H5ELLA.js";
34
32
  import "./chunks/chunk-HMXCN6PG.js";
35
33
  import "./chunks/chunk-AB35TJST.js";
36
- import "./chunks/chunk-BZFOFC4D.js";
34
+ import "./chunks/chunk-2VMKQKVO.js";
37
35
  import "./chunks/chunk-HKYXWZQS.js";
38
36
  import "./chunks/chunk-34BOZKIE.js";
39
37
  import "./chunks/chunk-JKJWSY4V.js";
40
- import "./chunks/chunk-CGMSKIEO.js";
41
- import "./chunks/chunk-UBQSRCWR.js";
38
+ import "./chunks/chunk-DV5B5UU7.js";
39
+ import "./chunks/chunk-3YBP46PB.js";
40
+ import "./chunks/chunk-VACK24HF.js";
42
41
  import "./chunks/chunk-CPMHA4W5.js";
42
+ import "./chunks/chunk-ZPZ7GNBT.js";
43
43
  import "./chunks/chunk-BSOZW3FC.js";
44
44
  import "./chunks/chunk-RJWPJCIB.js";
45
45
  import "./chunks/chunk-HOAIOEI7.js";
46
- import "./chunks/chunk-TGUFT6KK.js";
47
- import "./chunks/chunk-4XWZNPQ2.js";
46
+ import "./chunks/chunk-BLUEFYIR.js";
47
+ import "./chunks/chunk-2JL2JVZ2.js";
48
48
  export {
49
49
  figureScene
50
50
  };
package/dist/figureSettings.js CHANGED
@@ -1,31 +1,31 @@
1
1
  import {
2
2
  FIGURE_DEFAULTS,
3
3
  figureSpecSettings
4
- } from "./chunks/chunk-K5LDBMLX.js";
5
- import "./chunks/chunk-WG5D2H7X.js";
4
+ } from "./chunks/chunk-3FWNQNF7.js";
5
+ import "./chunks/chunk-7OTWJQGA.js";
6
6
  import "./chunks/chunk-OPPVSPEF.js";
7
7
  import "./chunks/chunk-3PZSBNLI.js";
8
8
  import "./chunks/chunk-CKUVEHSS.js";
9
9
  import "./chunks/chunk-VPE4AYP7.js";
10
- import "./chunks/chunk-FFHJGWDK.js";
10
+ import "./chunks/chunk-2C5SATRZ.js";
11
11
  import "./chunks/chunk-QYBZZI5H.js";
12
- import "./chunks/chunk-5I3K4R2G.js";
13
- import "./chunks/chunk-NJGYLYU7.js";
14
- import "./chunks/chunk-B5X2RLJG.js";
12
+ import "./chunks/chunk-CFXXFHRK.js";
13
+ import "./chunks/chunk-W2YAW36J.js";
15
14
  import "./chunks/chunk-VX656OAZ.js";
16
15
  import "./chunks/chunk-DZR37KXT.js";
17
16
  import "./chunks/chunk-EIY2SKD3.js";
18
- import "./chunks/chunk-ZPZ7GNBT.js";
19
- import "./chunks/chunk-BZFOFC4D.js";
17
+ import "./chunks/chunk-2VMKQKVO.js";
20
18
  import "./chunks/chunk-HKYXWZQS.js";
21
19
  import "./chunks/chunk-34BOZKIE.js";
22
- import "./chunks/chunk-CGMSKIEO.js";
23
- import "./chunks/chunk-UBQSRCWR.js";
20
+ import "./chunks/chunk-DV5B5UU7.js";
21
+ import "./chunks/chunk-3YBP46PB.js";
22
+ import "./chunks/chunk-VACK24HF.js";
24
23
  import "./chunks/chunk-CPMHA4W5.js";
24
+ import "./chunks/chunk-ZPZ7GNBT.js";
25
25
  import "./chunks/chunk-BSOZW3FC.js";
26
26
  import "./chunks/chunk-RJWPJCIB.js";
27
27
  import "./chunks/chunk-HOAIOEI7.js";
28
- import "./chunks/chunk-4XWZNPQ2.js";
28
+ import "./chunks/chunk-2JL2JVZ2.js";
29
29
  export {
30
30
  FIGURE_DEFAULTS,
31
31
  figureSpecSettings
package/dist/foldVariants.js CHANGED
@@ -1,7 +1,7 @@
1
1
  import {
2
2
  foldVariants
3
- } from "./chunks/chunk-SOMZGDVS.js";
4
- import "./chunks/chunk-UBQSRCWR.js";
3
+ } from "./chunks/chunk-KJDERUQF.js";
4
+ import "./chunks/chunk-VACK24HF.js";
5
5
  import "./chunks/chunk-CPMHA4W5.js";
6
6
  import "./chunks/chunk-BSOZW3FC.js";
7
7
  import "./chunks/chunk-RJWPJCIB.js";
package/dist/gaf/parseGaf.js CHANGED
@@ -3,7 +3,7 @@ import {
3
3
  parseGaf,
4
4
  parseGafLine,
5
5
  parseGafPath
6
- } from "../chunks/chunk-C44YRP5F.js";
6
+ } from "../chunks/chunk-5OJZV6YT.js";
7
7
  export {
8
8
  parseCs,
9
9
  parseGaf,
package/dist/gbzCut.js CHANGED
@@ -5,17 +5,17 @@ import {
5
5
  haplotypeIndexBeside,
6
6
  openGbz,
7
7
  parseRegion
8
- } from "./chunks/chunk-J3JODFDF.js";
9
- import "./chunks/chunk-NMWQUFPF.js";
8
+ } from "./chunks/chunk-5WB7O7IT.js";
9
+ import "./chunks/chunk-SVVFWTG4.js";
10
10
  import "./chunks/chunk-HNWJ4B7S.js";
11
- import "./chunks/chunk-234NFZS4.js";
11
+ import "./chunks/chunk-5ORP7EFJ.js";
12
12
  import "./chunks/chunk-DZR37KXT.js";
13
13
  import "./chunks/chunk-EIY2SKD3.js";
14
14
  import "./chunks/chunk-ZPZ7GNBT.js";
15
15
  import "./chunks/chunk-BSOZW3FC.js";
16
16
  import "./chunks/chunk-RJWPJCIB.js";
17
17
  import "./chunks/chunk-HOAIOEI7.js";
18
- import "./chunks/chunk-4XWZNPQ2.js";
18
+ import "./chunks/chunk-2JL2JVZ2.js";
19
19
  export {
20
20
  HPRC_GBZ,
21
21
  cutGbzRegion,
package/dist/gbzWindow.js CHANGED
@@ -12,16 +12,16 @@ import {
12
12
  referencePathQuery,
13
13
  referenceSamplesOf,
14
14
  resolveReferenceSample
15
- } from "./chunks/chunk-NMWQUFPF.js";
15
+ } from "./chunks/chunk-SVVFWTG4.js";
16
16
  import "./chunks/chunk-HNWJ4B7S.js";
17
- import "./chunks/chunk-234NFZS4.js";
17
+ import "./chunks/chunk-5ORP7EFJ.js";
18
18
  import "./chunks/chunk-DZR37KXT.js";
19
19
  import "./chunks/chunk-EIY2SKD3.js";
20
20
  import "./chunks/chunk-ZPZ7GNBT.js";
21
21
  import "./chunks/chunk-BSOZW3FC.js";
22
22
  import "./chunks/chunk-RJWPJCIB.js";
23
23
  import "./chunks/chunk-HOAIOEI7.js";
24
- import "./chunks/chunk-4XWZNPQ2.js";
24
+ import "./chunks/chunk-2JL2JVZ2.js";
25
25
  export {
26
26
  GBZ_CUT_DEFAULTS,
27
27
  NoReferenceSampleError,