@jbrowse/bandage-core 11.3.0 → 11.5.0

This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
Files changed (64) hide show
  1. package/dist/bubbles/superbubbles.js +3 -3
  2. package/dist/chunks/{chunk-T35BSLW5.js → chunk-3BCVMZUT.js} +8 -8
  3. package/dist/chunks/{chunk-3HGYGISG.js → chunk-3U3C4PRK.js} +1 -1
  4. package/dist/chunks/{chunk-TEXAKEJX.js → chunk-5F4D35U5.js} +2 -2
  5. package/dist/chunks/{chunk-M75QPZNJ.js → chunk-64FCX424.js} +29 -18
  6. package/dist/chunks/{chunk-XVS52NMZ.js → chunk-7EDGWT67.js} +1 -1
  7. package/dist/chunks/{chunk-PNM6Z3IE.js → chunk-A32ZKSHN.js} +2 -2
  8. package/dist/chunks/{chunk-BXLLMWC3.js → chunk-AKLSY4GD.js} +1 -1
  9. package/dist/chunks/{chunk-3UST3ZQE.js → chunk-EGBBIXTG.js} +1 -1
  10. package/dist/chunks/{chunk-TZLEHZVC.js → chunk-FWSERUJV.js} +1 -1
  11. package/dist/chunks/{chunk-TABI4JEU.js → chunk-HN3WHMPJ.js} +1 -1
  12. package/dist/chunks/{chunk-JDZ5GTZT.js → chunk-IOWLTUEB.js} +1 -1
  13. package/dist/chunks/{chunk-TUQKGAK3.js → chunk-J3JODFDF.js} +1 -1
  14. package/dist/chunks/chunk-JOLLU34X.js +21 -0
  15. package/dist/chunks/{chunk-SWCULW6S.js → chunk-JOWKKQAL.js} +13 -10
  16. package/dist/chunks/{chunk-EFD753MS.js → chunk-K5LDBMLX.js} +1 -1
  17. package/dist/chunks/{chunk-SLDCKMIP.js → chunk-KOJKFNCW.js} +8 -8
  18. package/dist/chunks/{chunk-B5ARSBOH.js → chunk-NJGYLYU7.js} +7 -6
  19. package/dist/chunks/{chunk-RNNYRNDU.js → chunk-PQBALYSO.js} +13 -13
  20. package/dist/chunks/{chunk-3LZ334X4.js → chunk-RK3HRRCW.js} +1 -1
  21. package/dist/chunks/{chunk-XZ6PQBU6.js → chunk-TRGKMLXT.js} +1 -1
  22. package/dist/chunks/{chunk-TJOOHTJ6.js → chunk-VD4MLYEK.js} +1 -1
  23. package/dist/chunks/{chunk-DR24UTRS.js → chunk-VQ7474EH.js} +5 -3
  24. package/dist/chunks/{chunk-7O7EGTYG.js → chunk-WC6HX6GJ.js} +1 -1
  25. package/dist/chunks/{chunk-REOWLPH4.js → chunk-WG5D2H7X.js} +4 -4
  26. package/dist/chunks/{chunk-XEWPWCML.js → chunk-WLR4KJVI.js} +1 -1
  27. package/dist/chunks/{chunk-CE6ZIKJX.js → chunk-XKZ56L5A.js} +1 -1
  28. package/dist/cli/figure.js +21 -21
  29. package/dist/cli/fold.js +3 -3
  30. package/dist/figure.js +17 -17
  31. package/dist/figureData.js +18 -18
  32. package/dist/figureScene.js +12 -12
  33. package/dist/figureSettings.js +4 -4
  34. package/dist/gbzCut.js +1 -1
  35. package/dist/gfa/graphTables.js +1 -1
  36. package/dist/index.js +65 -59
  37. package/dist/layout/forceCache.js +4 -4
  38. package/dist/layout/tubeMapLayout.js +4 -4
  39. package/dist/layout/walkRowDraw.js +2 -2
  40. package/dist/layout/walkRowLayout.js +4 -4
  41. package/dist/layout/walkRowRuns.js +2 -2
  42. package/dist/layout/walkRows.js +3 -3
  43. package/dist/layout/walkStrip.js +7 -7
  44. package/dist/layoutModes.js +6 -6
  45. package/dist/locus.js +8 -0
  46. package/dist/pipeline.js +3 -3
  47. package/dist/referenceStrip.js +2 -2
  48. package/dist/renderer/GeometryBuilder.js +5 -3
  49. package/dist/tubeMap/bundle.js +5 -5
  50. package/dist/tubeMap/coarsen.js +5 -5
  51. package/dist/tubeMap/deviations.js +5 -5
  52. package/dist/tubeMap/draw.js +4 -4
  53. package/dist/tubeMap/nodeColors.js +2 -2
  54. package/dist/types/gfa/graphTables.d.ts +3 -2
  55. package/dist/types/index.d.ts +1 -0
  56. package/dist/types/locus.d.ts +10 -0
  57. package/dist/types/renderer/GeometryBuilder.d.ts +1 -0
  58. package/dist/types/version.d.ts +1 -1
  59. package/dist/version.js +1 -1
  60. package/dist/viewport.js +4 -4
  61. package/dist/walkEncoding.js +2 -2
  62. package/dist/walkHighlight.js +3 -3
  63. package/package.json +1 -1
  64. package/dist/chunks/{chunk-2Q22S52W.js → chunk-2E25TX4G.js} +6 -6
@@ -8,15 +8,15 @@ import {
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  import "../chunks/chunk-G6UIYQZR.js";
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  import {
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  figureSvg
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- } from "../chunks/chunk-RNNYRNDU.js";
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+ } from "../chunks/chunk-PQBALYSO.js";
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+ import "../chunks/chunk-A32ZKSHN.js";
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  import "../chunks/chunk-EJRJAAN7.js";
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  import "../chunks/chunk-RBCE2OQH.js";
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  import "../chunks/chunk-V4YML3GR.js";
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- import "../chunks/chunk-PNM6Z3IE.js";
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  import {
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  genesOnRow,
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  placeRowGenes
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- } from "../chunks/chunk-XZ6PQBU6.js";
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+ } from "../chunks/chunk-TRGKMLXT.js";
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  import "../chunks/chunk-JSUCGZ6K.js";
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  import "../chunks/chunk-PSCSZSVK.js";
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  import "../chunks/chunk-OMUPUB4J.js";
@@ -25,15 +25,15 @@ import "../chunks/chunk-H2H4Y3TV.js";
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  import {
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  laidOutGraph,
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  walkLayers
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- } from "../chunks/chunk-SLDCKMIP.js";
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+ } from "../chunks/chunk-KOJKFNCW.js";
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  import {
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  LAYOUT_ENGINE_VALUES,
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  isLayoutEngineKind
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  } from "../chunks/chunk-JMABOQWL.js";
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  import {
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  LAYOUT_MODES
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- } from "../chunks/chunk-TEXAKEJX.js";
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- import "../chunks/chunk-3LZ334X4.js";
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+ } from "../chunks/chunk-5F4D35U5.js";
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+ import "../chunks/chunk-RK3HRRCW.js";
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  import "../chunks/chunk-A7H753BA.js";
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  import "../chunks/chunk-GJU6BJJA.js";
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  import "../chunks/chunk-GJLZ2MKE.js";
@@ -47,39 +47,39 @@ import {
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  haplotypeIndexBeside,
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  openGbz,
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  parseRegion
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- } from "../chunks/chunk-TUQKGAK3.js";
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+ } from "../chunks/chunk-J3JODFDF.js";
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  import "../chunks/chunk-NMWQUFPF.js";
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  import "../chunks/chunk-HNWJ4B7S.js";
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  import "../chunks/chunk-77EGQQJU.js";
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- import "../chunks/chunk-XEWPWCML.js";
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- import "../chunks/chunk-CE6ZIKJX.js";
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- import "../chunks/chunk-T35BSLW5.js";
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+ import "../chunks/chunk-WLR4KJVI.js";
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+ import "../chunks/chunk-XKZ56L5A.js";
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+ import "../chunks/chunk-3BCVMZUT.js";
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  import "../chunks/chunk-LOCJN3BZ.js";
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- import "../chunks/chunk-DR24UTRS.js";
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- import "../chunks/chunk-TABI4JEU.js";
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- import "../chunks/chunk-D4ZFRBB4.js";
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- import "../chunks/chunk-SWCULW6S.js";
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+ import "../chunks/chunk-VQ7474EH.js";
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+ import "../chunks/chunk-HN3WHMPJ.js";
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+ import "../chunks/chunk-JOWKKQAL.js";
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  import "../chunks/chunk-G2FD7S3C.js";
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+ import "../chunks/chunk-D4ZFRBB4.js";
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  import "../chunks/chunk-GQZVR5DW.js";
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  import "../chunks/chunk-WA5WNP6V.js";
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- import "../chunks/chunk-TZLEHZVC.js";
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+ import "../chunks/chunk-FWSERUJV.js";
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  import {
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  filterSamples,
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  walkRows
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- } from "../chunks/chunk-JDZ5GTZT.js";
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- import "../chunks/chunk-M75QPZNJ.js";
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+ } from "../chunks/chunk-IOWLTUEB.js";
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+ import "../chunks/chunk-64FCX424.js";
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  import "../chunks/chunk-3GP3KT5L.js";
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  import "../chunks/chunk-CRCD3ODN.js";
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- import "../chunks/chunk-EFD753MS.js";
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- import "../chunks/chunk-REOWLPH4.js";
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+ import "../chunks/chunk-K5LDBMLX.js";
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+ import "../chunks/chunk-WG5D2H7X.js";
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+ import "../chunks/chunk-OPPVSPEF.js";
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  import "../chunks/chunk-3PZSBNLI.js";
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  import "../chunks/chunk-CKUVEHSS.js";
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- import "../chunks/chunk-OPPVSPEF.js";
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  import "../chunks/chunk-VPE4AYP7.js";
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  import "../chunks/chunk-FFHJGWDK.js";
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  import "../chunks/chunk-QYBZZI5H.js";
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  import "../chunks/chunk-5I3K4R2G.js";
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- import "../chunks/chunk-B5ARSBOH.js";
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+ import "../chunks/chunk-NJGYLYU7.js";
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  import "../chunks/chunk-B5X2RLJG.js";
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  import "../chunks/chunk-VX656OAZ.js";
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  import "../chunks/chunk-234NFZS4.js";
package/dist/cli/fold.js CHANGED
@@ -10,15 +10,15 @@ import {
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  } from "../chunks/chunk-SOMZGDVS.js";
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  import {
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  loadGraph
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- } from "../chunks/chunk-REOWLPH4.js";
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+ } from "../chunks/chunk-WG5D2H7X.js";
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+ import "../chunks/chunk-OPPVSPEF.js";
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  import "../chunks/chunk-3PZSBNLI.js";
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  import "../chunks/chunk-CKUVEHSS.js";
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- import "../chunks/chunk-OPPVSPEF.js";
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  import "../chunks/chunk-VPE4AYP7.js";
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  import "../chunks/chunk-FFHJGWDK.js";
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  import "../chunks/chunk-QYBZZI5H.js";
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  import "../chunks/chunk-5I3K4R2G.js";
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- import "../chunks/chunk-B5ARSBOH.js";
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+ import "../chunks/chunk-NJGYLYU7.js";
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  import "../chunks/chunk-B5X2RLJG.js";
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  import "../chunks/chunk-VX656OAZ.js";
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package/dist/figure.js CHANGED
@@ -1,43 +1,43 @@
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  import {
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  figureSvg
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- } from "./chunks/chunk-RNNYRNDU.js";
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+ } from "./chunks/chunk-PQBALYSO.js";
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+ import "./chunks/chunk-A32ZKSHN.js";
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  import "./chunks/chunk-EJRJAAN7.js";
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  import "./chunks/chunk-RBCE2OQH.js";
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  import "./chunks/chunk-V4YML3GR.js";
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- import "./chunks/chunk-PNM6Z3IE.js";
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- import "./chunks/chunk-XZ6PQBU6.js";
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+ import "./chunks/chunk-TRGKMLXT.js";
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  import "./chunks/chunk-JSUCGZ6K.js";
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  import "./chunks/chunk-PSCSZSVK.js";
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  import "./chunks/chunk-OMUPUB4J.js";
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  import "./chunks/chunk-3VCKBSML.js";
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  import "./chunks/chunk-H2H4Y3TV.js";
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  import "./chunks/chunk-77EGQQJU.js";
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- import "./chunks/chunk-XEWPWCML.js";
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- import "./chunks/chunk-CE6ZIKJX.js";
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- import "./chunks/chunk-T35BSLW5.js";
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+ import "./chunks/chunk-WLR4KJVI.js";
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+ import "./chunks/chunk-XKZ56L5A.js";
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+ import "./chunks/chunk-3BCVMZUT.js";
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  import "./chunks/chunk-LOCJN3BZ.js";
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- import "./chunks/chunk-DR24UTRS.js";
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- import "./chunks/chunk-TABI4JEU.js";
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- import "./chunks/chunk-D4ZFRBB4.js";
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- import "./chunks/chunk-SWCULW6S.js";
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+ import "./chunks/chunk-VQ7474EH.js";
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+ import "./chunks/chunk-HN3WHMPJ.js";
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+ import "./chunks/chunk-JOWKKQAL.js";
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  import "./chunks/chunk-G2FD7S3C.js";
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+ import "./chunks/chunk-D4ZFRBB4.js";
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- import "./chunks/chunk-TZLEHZVC.js";
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- import "./chunks/chunk-JDZ5GTZT.js";
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- import "./chunks/chunk-M75QPZNJ.js";
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+ import "./chunks/chunk-FWSERUJV.js";
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+ import "./chunks/chunk-IOWLTUEB.js";
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+ import "./chunks/chunk-64FCX424.js";
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- import "./chunks/chunk-EFD753MS.js";
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- import "./chunks/chunk-REOWLPH4.js";
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+ import "./chunks/chunk-K5LDBMLX.js";
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+ import "./chunks/chunk-WG5D2H7X.js";
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+ import "./chunks/chunk-OPPVSPEF.js";
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- import "./chunks/chunk-OPPVSPEF.js";
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+ import "./chunks/chunk-NJGYLYU7.js";
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@@ -3,10 +3,10 @@ import {
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- } from "./chunks/chunk-SLDCKMIP.js";
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+ } from "./chunks/chunk-KOJKFNCW.js";
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- import "./chunks/chunk-TEXAKEJX.js";
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- import "./chunks/chunk-3LZ334X4.js";
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+ import "./chunks/chunk-5F4D35U5.js";
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@@ -14,36 +14,36 @@ import "./chunks/chunk-MYLAJDKB.js";
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- import "./chunks/chunk-T35BSLW5.js";
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+ import "./chunks/chunk-WLR4KJVI.js";
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+ import "./chunks/chunk-XKZ56L5A.js";
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- import "./chunks/chunk-DR24UTRS.js";
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- import "./chunks/chunk-TABI4JEU.js";
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- import "./chunks/chunk-D4ZFRBB4.js";
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- import "./chunks/chunk-SWCULW6S.js";
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+ import "./chunks/chunk-VQ7474EH.js";
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+ import "./chunks/chunk-HN3WHMPJ.js";
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+ import "./chunks/chunk-JOWKKQAL.js";
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- import "./chunks/chunk-JDZ5GTZT.js";
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- import "./chunks/chunk-M75QPZNJ.js";
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+ import "./chunks/chunk-FWSERUJV.js";
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+ import "./chunks/chunk-IOWLTUEB.js";
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+ import "./chunks/chunk-64FCX424.js";
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+ import "./chunks/chunk-K5LDBMLX.js";
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+ import "./chunks/chunk-WG5D2H7X.js";
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+ import "./chunks/chunk-OPPVSPEF.js";
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@@ -1,29 +1,29 @@
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+ import "./chunks/chunk-VQ7474EH.js";
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+ import "./chunks/chunk-HN3WHMPJ.js";
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+ import "./chunks/chunk-JOWKKQAL.js";
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+ import "./chunks/chunk-K5LDBMLX.js";
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+ import "./chunks/chunk-WG5D2H7X.js";
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+ import "./chunks/chunk-OPPVSPEF.js";
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@@ -1,16 +1,16 @@
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+ } from "./chunks/chunk-K5LDBMLX.js";
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10
  import "./chunks/chunk-FFHJGWDK.js";
11
11
  import "./chunks/chunk-QYBZZI5H.js";
12
12
  import "./chunks/chunk-5I3K4R2G.js";
13
- import "./chunks/chunk-B5ARSBOH.js";
13
+ import "./chunks/chunk-NJGYLYU7.js";
14
14
  import "./chunks/chunk-B5X2RLJG.js";
15
15
  import "./chunks/chunk-VX656OAZ.js";
16
16
  import "./chunks/chunk-DZR37KXT.js";
package/dist/gbzCut.js CHANGED
@@ -5,7 +5,7 @@ import {
5
5
  haplotypeIndexBeside,
6
6
  openGbz,
7
7
  parseRegion
8
- } from "./chunks/chunk-TUQKGAK3.js";
8
+ } from "./chunks/chunk-J3JODFDF.js";
9
9
  import "./chunks/chunk-NMWQUFPF.js";
10
10
  import "./chunks/chunk-HNWJ4B7S.js";
11
11
  import "./chunks/chunk-234NFZS4.js";
@@ -3,7 +3,7 @@ import {
3
3
  graphTablesGFA,
4
4
  tableNodeIds,
5
5
  tablePath
6
- } from "../chunks/chunk-B5ARSBOH.js";
6
+ } from "../chunks/chunk-NJGYLYU7.js";
7
7
  import "../chunks/chunk-EIY2SKD3.js";
8
8
  import "../chunks/chunk-ZPZ7GNBT.js";
9
9
  import "../chunks/chunk-4XWZNPQ2.js";
package/dist/index.js CHANGED
@@ -1,25 +1,35 @@
1
1
  import {
2
2
  wheelZoomFactor
3
3
  } from "./chunks/chunk-TDQLINVI.js";
4
+ import {
5
+ drawTubeMapGenes,
6
+ tubeMapGenes
7
+ } from "./chunks/chunk-6EOB6ANX.js";
4
8
  import {
5
9
  tubeMapNodeColors
6
- } from "./chunks/chunk-XVS52NMZ.js";
10
+ } from "./chunks/chunk-7EDGWT67.js";
7
11
  import {
8
12
  bundleRoutes
9
- } from "./chunks/chunk-TJOOHTJ6.js";
13
+ } from "./chunks/chunk-VD4MLYEK.js";
10
14
  import {
11
15
  connectorAt,
12
16
  drawLitConnector,
13
17
  drawTubeMapConnectors,
14
18
  tubeMapConnectors
15
19
  } from "./chunks/chunk-2ZT7ZF7A.js";
20
+ import {
21
+ drawTubeMapRuler,
22
+ referenceBoxes,
23
+ rulerBoxes,
24
+ tubeX
25
+ } from "./chunks/chunk-HSVFCA2J.js";
16
26
  import {
17
27
  drawTubeMap,
18
28
  drawTubeMapHighlight,
19
29
  tubeMapMismatchAt,
20
30
  tubeMapPicture,
21
31
  tubeMapTrackAt
22
- } from "./chunks/chunk-3HGYGISG.js";
32
+ } from "./chunks/chunk-3U3C4PRK.js";
23
33
  import "./chunks/chunk-BX4AUMZE.js";
24
34
  import {
25
35
  tubeMapFrame,
@@ -29,16 +39,6 @@ import {
29
39
  referenceKnots,
30
40
  warpX
31
41
  } from "./chunks/chunk-MYDHU2UV.js";
32
- import {
33
- drawTubeMapGenes,
34
- tubeMapGenes
35
- } from "./chunks/chunk-6EOB6ANX.js";
36
- import {
37
- drawTubeMapRuler,
38
- referenceBoxes,
39
- rulerBoxes,
40
- tubeX
41
- } from "./chunks/chunk-HSVFCA2J.js";
42
42
  import {
43
43
  ribbonJoin,
44
44
  sharedRowOrder,
@@ -47,14 +47,24 @@ import {
47
47
  } from "./chunks/chunk-UFUSPK2A.js";
48
48
  import {
49
49
  createForceLayoutCache
50
- } from "./chunks/chunk-BXLLMWC3.js";
50
+ } from "./chunks/chunk-AKLSY4GD.js";
51
51
  import {
52
52
  graphBubbles,
53
53
  superbubblesFromGraph
54
- } from "./chunks/chunk-2Q22S52W.js";
54
+ } from "./chunks/chunk-2E25TX4G.js";
55
+ import {
56
+ bubbleHalos
57
+ } from "./chunks/chunk-E4ZM4OOJ.js";
55
58
  import {
56
59
  bubblesFromGraph
57
60
  } from "./chunks/chunk-RFG42VIO.js";
61
+ import {
62
+ BUBBLE_KIND_COLORS,
63
+ BUBBLE_KIND_NAMES,
64
+ bubbleSegmentIds,
65
+ classifyBubble
66
+ } from "./chunks/chunk-A4JDEUAI.js";
67
+ import "./chunks/chunk-FX4RDMDN.js";
58
68
  import {
59
69
  bubbleSubgraph
60
70
  } from "./chunks/chunk-PNMJFFNB.js";
@@ -67,41 +77,26 @@ import {
67
77
  genesFromText,
68
78
  mergeOverlappingByName
69
79
  } from "./chunks/chunk-G6UIYQZR.js";
70
- import {
71
- bubbleHalos
72
- } from "./chunks/chunk-E4ZM4OOJ.js";
73
- import {
74
- BUBBLE_KIND_COLORS,
75
- BUBBLE_KIND_NAMES,
76
- bubbleSegmentIds,
77
- classifyBubble
78
- } from "./chunks/chunk-A4JDEUAI.js";
79
- import "./chunks/chunk-FX4RDMDN.js";
80
80
  import {
81
81
  REFERENCE_STRIP_ZONE_PX,
82
82
  drawReferenceStrip,
83
83
  referenceStripBlocks,
84
84
  stripBlockAt
85
- } from "./chunks/chunk-3UST3ZQE.js";
85
+ } from "./chunks/chunk-EGBBIXTG.js";
86
86
  import {
87
87
  LAYOUT_QUALITIES
88
88
  } from "./chunks/chunk-K5SIJGAE.js";
89
+ import {
90
+ formatLocus,
91
+ parseLocus
92
+ } from "./chunks/chunk-JOLLU34X.js";
89
93
  import {
90
94
  edgeHoverText,
91
95
  regionLabel
92
96
  } from "./chunks/chunk-AZFVORTC.js";
93
97
  import {
94
98
  figureSvg
95
- } from "./chunks/chunk-RNNYRNDU.js";
96
- import {
97
- Canvas2DRenderer
98
- } from "./chunks/chunk-EJRJAAN7.js";
99
- import {
100
- getDpr
101
- } from "./chunks/chunk-RBCE2OQH.js";
102
- import {
103
- svgCanvas
104
- } from "./chunks/chunk-V4YML3GR.js";
99
+ } from "./chunks/chunk-PQBALYSO.js";
105
100
  import {
106
101
  WALK_STRIP_CEILING_PX,
107
102
  cutsWholeWalks,
@@ -113,7 +108,16 @@ import {
113
108
  walkStripApplies,
114
109
  walkStripFrame,
115
110
  walkStripLabelsTree
116
- } from "./chunks/chunk-PNM6Z3IE.js";
111
+ } from "./chunks/chunk-A32ZKSHN.js";
112
+ import {
113
+ Canvas2DRenderer
114
+ } from "./chunks/chunk-EJRJAAN7.js";
115
+ import {
116
+ getDpr
117
+ } from "./chunks/chunk-RBCE2OQH.js";
118
+ import {
119
+ svgCanvas
120
+ } from "./chunks/chunk-V4YML3GR.js";
117
121
  import {
118
122
  BAR_PX,
119
123
  CALL_TICK,
@@ -141,7 +145,7 @@ import {
141
145
  walkRowsKey,
142
146
  walkRowsKeyTree,
143
147
  walkRowsTree
144
- } from "./chunks/chunk-XZ6PQBU6.js";
148
+ } from "./chunks/chunk-TRGKMLXT.js";
145
149
  import {
146
150
  EXON_COLOR,
147
151
  exonOutlineTree,
@@ -165,7 +169,7 @@ import {
165
169
  import {
166
170
  figureData,
167
171
  gfaFigureData
168
- } from "./chunks/chunk-SLDCKMIP.js";
172
+ } from "./chunks/chunk-KOJKFNCW.js";
169
173
  import {
170
174
  LAYOUT_ENGINES,
171
175
  layoutEngine
@@ -175,8 +179,8 @@ import {
175
179
  LAYOUT_MODES,
176
180
  layoutModeByValue,
177
181
  modeUsesLayoutEngine
178
- } from "./chunks/chunk-TEXAKEJX.js";
179
- import "./chunks/chunk-3LZ334X4.js";
182
+ } from "./chunks/chunk-5F4D35U5.js";
183
+ import "./chunks/chunk-RK3HRRCW.js";
180
184
  import "./chunks/chunk-A7H753BA.js";
181
185
  import "./chunks/chunk-GJU6BJJA.js";
182
186
  import "./chunks/chunk-GJLZ2MKE.js";
@@ -189,7 +193,7 @@ import {
189
193
  cutGbzRegion,
190
194
  openGbz,
191
195
  parseRegion
192
- } from "./chunks/chunk-TUQKGAK3.js";
196
+ } from "./chunks/chunk-J3JODFDF.js";
193
197
  import {
194
198
  compactTables,
195
199
  cutWindowGFA,
@@ -205,7 +209,7 @@ import {
205
209
  } from "./chunks/chunk-77EGQQJU.js";
206
210
  import {
207
211
  version
208
- } from "./chunks/chunk-XEWPWCML.js";
212
+ } from "./chunks/chunk-WLR4KJVI.js";
209
213
  import {
210
214
  axisScaleOf,
211
215
  contains,
@@ -213,8 +217,8 @@ import {
213
217
  screenToLayout,
214
218
  viewportOf,
215
219
  zoomAbout
216
- } from "./chunks/chunk-CE6ZIKJX.js";
217
- import "./chunks/chunk-T35BSLW5.js";
220
+ } from "./chunks/chunk-XKZ56L5A.js";
221
+ import "./chunks/chunk-3BCVMZUT.js";
218
222
  import {
219
223
  layoutGeometryInputs
220
224
  } from "./chunks/chunk-LOCJN3BZ.js";
@@ -222,7 +226,7 @@ import {
222
226
  facetLifts,
223
227
  walkHighlight,
224
228
  walkLift
225
- } from "./chunks/chunk-DR24UTRS.js";
229
+ } from "./chunks/chunk-VQ7474EH.js";
226
230
  import {
227
231
  WALK_FIELDS,
228
232
  WALK_SCHEMES,
@@ -230,17 +234,17 @@ import {
230
234
  encodingSwatchCss,
231
235
  resolveEncoding,
232
236
  schemeCss
233
- } from "./chunks/chunk-TABI4JEU.js";
237
+ } from "./chunks/chunk-HN3WHMPJ.js";
238
+ import {
239
+ buildGeometry,
240
+ computeReferenceRamp
241
+ } from "./chunks/chunk-JOWKKQAL.js";
242
+ import "./chunks/chunk-G2FD7S3C.js";
234
243
  import {
235
244
  rangeText,
236
245
  walkKey,
237
246
  walkPosition
238
247
  } from "./chunks/chunk-D4ZFRBB4.js";
239
- import {
240
- buildGeometry,
241
- computeReferenceRamp
242
- } from "./chunks/chunk-SWCULW6S.js";
243
- import "./chunks/chunk-G2FD7S3C.js";
244
248
  import {
245
249
  RAMP_GRADIENT_CSS,
246
250
  REFERENCE_RAMP_MAX_HUE,
@@ -253,16 +257,16 @@ import {
253
257
  walkRowLabels,
254
258
  walkRowLayoutOf,
255
259
  walkRowsExtent
256
- } from "./chunks/chunk-TZLEHZVC.js";
260
+ } from "./chunks/chunk-FWSERUJV.js";
257
261
  import {
258
262
  filterSamples,
259
263
  walkRows
260
- } from "./chunks/chunk-JDZ5GTZT.js";
264
+ } from "./chunks/chunk-IOWLTUEB.js";
261
265
  import {
262
266
  runAt,
263
267
  walkRowRuns,
264
268
  walkRowsOf
265
- } from "./chunks/chunk-M75QPZNJ.js";
269
+ } from "./chunks/chunk-64FCX424.js";
266
270
  import {
267
271
  pathColorsLegible,
268
272
  pathLegend,
@@ -278,7 +282,7 @@ import {
278
282
  import {
279
283
  FIGURE_DEFAULTS,
280
284
  figureSpecSettings
281
- } from "./chunks/chunk-EFD753MS.js";
285
+ } from "./chunks/chunk-K5LDBMLX.js";
282
286
  import {
283
287
  ENGINE_DEFAULTS,
284
288
  FIT_PADDING,
@@ -291,10 +295,10 @@ import {
291
295
  forceLayout,
292
296
  layoutExtent,
293
297
  loadGraph
294
- } from "./chunks/chunk-REOWLPH4.js";
298
+ } from "./chunks/chunk-WG5D2H7X.js";
299
+ import "./chunks/chunk-OPPVSPEF.js";
295
300
  import "./chunks/chunk-3PZSBNLI.js";
296
301
  import "./chunks/chunk-CKUVEHSS.js";
297
- import "./chunks/chunk-OPPVSPEF.js";
298
302
  import "./chunks/chunk-VPE4AYP7.js";
299
303
  import "./chunks/chunk-FFHJGWDK.js";
300
304
  import "./chunks/chunk-QYBZZI5H.js";
@@ -302,7 +306,7 @@ import "./chunks/chunk-5I3K4R2G.js";
302
306
  import {
303
307
  graphFromTables,
304
308
  graphTablesGFA
305
- } from "./chunks/chunk-B5ARSBOH.js";
309
+ } from "./chunks/chunk-NJGYLYU7.js";
306
310
  import "./chunks/chunk-B5X2RLJG.js";
307
311
  import "./chunks/chunk-VX656OAZ.js";
308
312
  import {
@@ -484,6 +488,7 @@ export {
484
488
  fitTransform,
485
489
  forceLayout,
486
490
  formatBp,
491
+ formatLocus,
487
492
  gapParts,
488
493
  gapStyle,
489
494
  geneCoverageNote,
@@ -518,6 +523,7 @@ export {
518
523
  panSNContig,
519
524
  panSNHaplotype,
520
525
  panSNSample,
526
+ parseLocus,
521
527
  parseRegion,
522
528
  parseStopTag,
523
529
  pathColorsLegible,
@@ -1,15 +1,15 @@
1
1
  import {
2
2
  createForceLayoutCache
3
- } from "../chunks/chunk-BXLLMWC3.js";
4
- import "../chunks/chunk-REOWLPH4.js";
3
+ } from "../chunks/chunk-AKLSY4GD.js";
4
+ import "../chunks/chunk-WG5D2H7X.js";
5
+ import "../chunks/chunk-OPPVSPEF.js";
5
6
  import "../chunks/chunk-3PZSBNLI.js";
6
7
  import "../chunks/chunk-CKUVEHSS.js";
7
- import "../chunks/chunk-OPPVSPEF.js";
8
8
  import "../chunks/chunk-VPE4AYP7.js";
9
9
  import "../chunks/chunk-FFHJGWDK.js";
10
10
  import "../chunks/chunk-QYBZZI5H.js";
11
11
  import "../chunks/chunk-5I3K4R2G.js";
12
- import "../chunks/chunk-B5ARSBOH.js";
12
+ import "../chunks/chunk-NJGYLYU7.js";
13
13
  import "../chunks/chunk-B5X2RLJG.js";
14
14
  import "../chunks/chunk-VX656OAZ.js";
15
15
  import "../chunks/chunk-DZR37KXT.js";
@@ -5,13 +5,13 @@ import {
5
5
  tubeMapLayout,
6
6
  tubeMapReferenceLayout,
7
7
  tubeMapTracks
8
- } from "../chunks/chunk-3LZ334X4.js";
8
+ } from "../chunks/chunk-RK3HRRCW.js";
9
9
  import "../chunks/chunk-A7H753BA.js";
10
10
  import "../chunks/chunk-C44YRP5F.js";
11
- import "../chunks/chunk-JDZ5GTZT.js";
12
- import "../chunks/chunk-M75QPZNJ.js";
11
+ import "../chunks/chunk-IOWLTUEB.js";
12
+ import "../chunks/chunk-64FCX424.js";
13
13
  import "../chunks/chunk-3GP3KT5L.js";
14
- import "../chunks/chunk-B5ARSBOH.js";
14
+ import "../chunks/chunk-NJGYLYU7.js";
15
15
  import "../chunks/chunk-B5X2RLJG.js";
16
16
  import "../chunks/chunk-EIY2SKD3.js";
17
17
  import "../chunks/chunk-ZPZ7GNBT.js";