@jbrowse/bandage-core 11.10.0 → 11.11.1

package/dist/chunks/{chunk-54C73ICS.js → chunk-27QSY2OI.js}

@@ -2,16 +2,20 @@ import {
   encodedColor,
   resolveEncoding,
   splitFamilies
-} from "./chunk-UVRCXTBY.js";
+} from "./chunk-EB4Q35QD.js";
 import {
   rampFraction
-} from "./chunk-53DZE3SA.js";
+} from "./chunk-GXCMBPC6.js";
 import {
   gapParts
 } from "./chunk-LG2UK4MB.js";
 import {
-  pathOrigin
+  pathOrigin,
+  referenceVisitStarts
 } from "./chunk-3YBP46PB.js";
+import {
+  isBackbone
+} from "./chunk-RJWPJCIB.js";
 import {
   panSNContig
 } from "./chunk-2JL2JVZ2.js";
@@ -132,20 +136,60 @@ function highlightOf(graph, name, { byId, edgeAt }) {
     unknownBp
   };
 }
-function laneColors(byId, walk, encoding, ramp) {
+function laneColors(graph, byId, walk, encoding, ramp) {
+  const places = encoding.field === "progress" || !ramp ? void 0 : referencePlaces(graph, byId, walk, ramp);
   const colors = /* @__PURE__ */ new Map();
   const passColors = /* @__PURE__ */ new Map();
   for (const [id, progress] of walk.passProgress) {
-    const node = byId.get(id);
-    const atNode = ramp && node ? rampFraction(node, ramp) : void 0;
+    const at = places?.get(id);
     const each = progress.map(
-      (t) => encodedColor(encoding, encoding.field === "progress" ? t : atNode)
+      (t, pass) => encodedColor(encoding, places ? at?.[pass] : t)
     );
     colors.set(id, each[0]);
     passColors.set(id, each);
   }
   return { colors, passColors };
 }
+function referencePlaces(graph, byId, walk, ramp) {
+  const startsOf = referenceVisitStarts(graph);
+  const places = /* @__PURE__ */ new Map();
+  for (const piece of walk.route) {
+    let cursor = Number.NaN;
+    let last = Number.NaN;
+    for (const id of piece) {
+      const node = byId.get(id);
+      let t = node && rampFraction(node, ramp);
+      if (node && t !== void 0 && isBackbone(node)) {
+        const starts = startsOf(node);
+        const len = node.length;
+        let at = starts[0];
+        if (starts.length > 1 && !Number.isNaN(cursor)) {
+          let gap = Infinity;
+          for (const start of starts) {
+            const g = Math.min(
+              Math.abs(start - cursor),
+              Math.abs(start + len - cursor)
+            );
+            if (g < gap) {
+              at = start;
+              gap = g;
+            }
+          }
+          t = (at + len / 2 - ramp.start) / ramp.span;
+        }
+        cursor = at + len === last ? at : at + len;
+        last = at;
+      }
+      const seen = places.get(id);
+      if (seen) {
+        seen.push(t);
+      } else {
+        places.set(id, [t]);
+      }
+    }
+  }
+  return places;
+}
 function reversedNodes(graph, byId, walk) {
   const reversed = /* @__PURE__ */ new Set();
   let bp = 0;
@@ -198,7 +242,7 @@ function walkLift(graph, layers, ramp) {
     return {
       ...walk,
       encoding,
-      ...laneColors(index.byId, walk, encoding, ramp),
+      ...laneColors(graph, index.byId, walk, encoding, ramp),
       reversed,
       reversedBp: bp
     };
@@ -220,7 +264,7 @@ function facetLifts(graph, lift, layers, ramp) {
         {
           ...walk,
           encoding,
-          ...laneColors(byId, walk, encoding, ramp)
+          ...laneColors(graph, byId, walk, encoding, ramp)
         }
       ],
       ramp

package/dist/chunks/{chunk-55DRWHBF.js → chunk-4CK2SN7U.js}

@@ -3,7 +3,7 @@ import {
 } from "./chunk-CO6RGQAD.js";
 import {
   layoutModeByValue
-} from "./chunk-ARXDNQLF.js";
+} from "./chunk-WE7CLY2E.js";
 import {
   parseRegion
 } from "./chunk-FNDNSDKW.js";
@@ -12,16 +12,16 @@ import {
 } from "./chunk-HEYIAMTC.js";
 import {
   version
-} from "./chunk-2NCZ5YYN.js";
+} from "./chunk-OWNGPF73.js";
 import {
   axisScaleOf
 } from "./chunk-3DHGSHC3.js";
 import {
   figureScene
-} from "./chunk-YQAZNH37.js";
+} from "./chunk-U2UPDVH4.js";
 import {
   encodingStops
-} from "./chunk-UVRCXTBY.js";
+} from "./chunk-EB4Q35QD.js";
 import {
   laneSlideAt,
   passesKey,
@@ -35,7 +35,7 @@ import {
 } from "./chunk-G2FD7S3C.js";
 import {
   FIGURE_DEFAULTS
-} from "./chunk-2MXFG3W7.js";
+} from "./chunk-PYK4JKYW.js";
 import {
   engineSettingsOf,
   fitTransform,

package/dist/chunks/chunk-DAEEMZ74.js

@@ -0,0 +1,34 @@
+// src/edgeWidths.ts
+var EDGE_WIDTHS = [
+  {
+    value: "uniform",
+    label: "Uniform",
+    description: "Every link the same thickness."
+  },
+  {
+    value: "walks",
+    label: "By walks",
+    description: "Thicker the more walks take a link, on the square root of its count against the busiest link in the cut. A graph without walks draws uniform."
+  }
+];
+var MIN_FACTOR = 0.5;
+var MAX_FACTOR = 4;
+function busiestEdge(graph) {
+  let most = 0;
+  for (const edge of graph.edges) {
+    most = Math.max(most, edge.pathIds?.length ?? 0);
+  }
+  return most;
+}
+function edgeWidthFactor(walks, busiest, edgeWidth) {
+  if (edgeWidth === "uniform" || busiest === 0) {
+    return 1;
+  }
+  return MIN_FACTOR + (MAX_FACTOR - MIN_FACTOR) * Math.sqrt(walks / busiest);
+}
+
+export {
+  EDGE_WIDTHS,
+  busiestEdge,
+  edgeWidthFactor
+};

package/dist/chunks/{chunk-UVRCXTBY.js → chunk-EB4Q35QD.js}

@@ -1,7 +1,7 @@
 import {
   REFERENCE_RAMP_ALT_COLOR,
   hslToRgb
-} from "./chunk-53DZE3SA.js";
+} from "./chunk-GXCMBPC6.js";
 import {
   packAbgr
 } from "./chunk-G2FD7S3C.js";

package/dist/chunks/{chunk-53DZE3SA.js → chunk-GXCMBPC6.js}

@@ -53,6 +53,10 @@ import {
 import {
   isBackbone
 } from "./chunk-RJWPJCIB.js";
+import {
+  busiestEdge,
+  edgeWidthFactor
+} from "./chunk-DAEEMZ74.js";
 
 // src/renderer/GeometryBuilder.ts
 var EDGE_DEFAULT_COLOR = packAbgr(119, 119, 119, 217);
@@ -496,6 +500,7 @@ function buildGeometry(options) {
     connectorThickness,
     drawPaths,
     nodeWidth = "uniform",
+    edgeWidth = "uniform",
     highlight,
     axis,
     linearLayout,
@@ -508,6 +513,7 @@ function buildGeometry(options) {
     version = 0
   } = options;
   const depthNorm = nodeWidth === "depth" ? meanDepth(graph) : 0;
+  const busiest = edgeWidth === "walks" ? busiestEdge(graph) : 0;
   const scale = axis.scaleX;
   const worldPerScreenPx = 1 / Math.max(scale, MIN_SCALE_FOR_OFFSET);
   const yToX = yToXOf(axis);
@@ -639,7 +645,8 @@ function buildGeometry(options) {
     const bypassed = deletions?.get(ei);
     const isDeletion = bypassed !== void 0;
     const onWalk = highlight?.edgeIndexes.has(ei) ?? false;
-    const edgeThickness = connectorThickness / 2 * (isDeletion ? DELETION_THICKNESS_FACTOR : 1);
+    const ribbonThickness = connectorThickness / 2 * (isDeletion ? DELETION_THICKNESS_FACTOR : 1);
+    const edgeThickness = isDeletion ? ribbonThickness : connectorThickness / 2 * edgeWidthFactor(numPaths, busiest, edgeWidth);
     const ribbons = drawPaths && numPaths > 0;
     const plainEdgeColor = isDeletion ? EDGE_DELETION_COLOR : EDGE_DEFAULT_COLOR;
     const edgeColor = !highlight || onWalk ? plainEdgeColor : fadeAbgr(plainEdgeColor, FADED_ALPHA);
@@ -692,7 +699,7 @@ function buildGeometry(options) {
     const arrowOn = (curves) => {
       const head = showArrows ? arrowheadFor({
         curves,
-        edgeHalfWidth: connectorThickness / 2,
+        edgeHalfWidth: isDeletion || ribbons ? connectorThickness / 2 : edgeThickness,
         nodeHalfWidth: intoHalfWidth,
         scale,
         yToX,
@@ -783,7 +790,7 @@ function buildGeometry(options) {
         const ribbonColor = pathColorByName(edge.pathIds[pathIdx]);
         stroke(
           curves,
-          edgeThickness,
+          ribbonThickness,
           highlight && (highlight.walks.length ? !highlight.names.has(edge.pathIds[pathIdx]) : !onWalk) ? fadeAbgr(ribbonColor, FADED_ALPHA) : ribbonColor
         );
         if (pathIdx === arrowRibbon) {

package/dist/chunks/{chunk-337LZP7C.js → chunk-I5HVXRAO.js}

@@ -1,7 +1,7 @@
 import {
   computeColorSchemeRange,
   getNodeColor
-} from "./chunk-53DZE3SA.js";
+} from "./chunk-GXCMBPC6.js";
 import {
   abgrToCssRgba
 } from "./chunk-G2FD7S3C.js";

package/dist/chunks/{chunk-77O67GIB.js → chunk-KYTV5EAZ.js}

@@ -3,10 +3,7 @@ import {
   boxesGenes,
   rowPitch,
   rowSpan
-} from "./chunk-ALOF5SOT.js";
-import {
-  el
-} from "./chunk-H2H4Y3TV.js";
+} from "./chunk-SVP2CQTA.js";
 import {
   READOUT_ROOM,
   longestBar
@@ -20,6 +17,9 @@ import {
 import {
   partitionPoint
 } from "./chunk-HOAIOEI7.js";
+import {
+  el
+} from "./chunk-H2H4Y3TV.js";
 
 // src/layout/walkStrip.ts
 function walkStripApplies(o) {

package/dist/chunks/{chunk-CHGTUO3C.js → chunk-LF7V3QSH.js}

@@ -1,19 +1,19 @@
+import {
+  svgCanvas
+} from "./chunk-V4YML3GR.js";
 import {
   stripGeneGaps,
   walkStripFrame,
   walkStripLabelsTree
-} from "./chunk-77O67GIB.js";
+} from "./chunk-KYTV5EAZ.js";
 import {
   Canvas2DRenderer
 } from "./chunk-4DMSPNYV.js";
-import {
-  svgCanvas
-} from "./chunk-V4YML3GR.js";
 import {
   walkRowsKey,
   walkRowsKeyTree,
   walkRowsTree
-} from "./chunk-ALOF5SOT.js";
+} from "./chunk-SVP2CQTA.js";
 import {
   EXON_COLOR,
   exonOutlineTree,
@@ -25,25 +25,21 @@ import {
 import {
   nodesUnderBox
 } from "./chunk-4JDO7ZLN.js";
-import {
-  escapeAttr,
-  serializeEl
-} from "./chunk-H2H4Y3TV.js";
 import {
   genePins
 } from "./chunk-HEYIAMTC.js";
 import {
   version
-} from "./chunk-2NCZ5YYN.js";
+} from "./chunk-OWNGPF73.js";
 import {
   axisScaleOf
 } from "./chunk-3DHGSHC3.js";
 import {
   figureScene
-} from "./chunk-YQAZNH37.js";
+} from "./chunk-U2UPDVH4.js";
 import {
   encodingStops
-} from "./chunk-UVRCXTBY.js";
+} from "./chunk-EB4Q35QD.js";
 import {
   THREAD_PX,
   passesKey,
@@ -60,7 +56,7 @@ import {
 } from "./chunk-ZANALBSX.js";
 import {
   FIGURE_DEFAULTS
-} from "./chunk-2MXFG3W7.js";
+} from "./chunk-PYK4JKYW.js";
 import {
   FIT_PADDING,
   fitTransform
@@ -72,6 +68,10 @@ import {
   occupancy,
   placeLabels
 } from "./chunk-AB35TJST.js";
+import {
+  escapeAttr,
+  serializeEl
+} from "./chunk-H2H4Y3TV.js";
 import {
   FACET_GAP_PX,
   FACET_PAD_PX,

package/dist/chunks/{chunk-SPEB75UH.js → chunk-LNLYK3Y5.js}

@@ -2,7 +2,7 @@ import {
   LIFT_BACKDROP_CSS,
   computeColorSchemeRange,
   getNodeColor
-} from "./chunk-53DZE3SA.js";
+} from "./chunk-GXCMBPC6.js";
 import {
   abgrToCssRgba
 } from "./chunk-G2FD7S3C.js";

package/dist/chunks/{chunk-2NCZ5YYN.js → chunk-OWNGPF73.js}

@@ -1,5 +1,5 @@
 // src/version.ts
-var version = "11.10.0";
+var version = "11.11.1";
 
 export {
   version

package/dist/chunks/{chunk-2MXFG3W7.js → chunk-PYK4JKYW.js}

@@ -9,6 +9,7 @@ var FIGURE_DEFAULTS = {
   height: 800,
   colorScheme: "auto",
   nodeWidth: "depth",
+  edgeWidth: "uniform",
   contigThickness: 6,
   connectorThickness: 2
 };

package/dist/chunks/{chunk-ALOF5SOT.js → chunk-SVP2CQTA.js}

@@ -1,9 +1,6 @@
-import {
-  el
-} from "./chunk-H2H4Y3TV.js";
 import {
   REFERENCE_RAMP_ALT_CSS
-} from "./chunk-53DZE3SA.js";
+} from "./chunk-GXCMBPC6.js";
 import {
   RAMP_GRADIENT_CSS,
   RAMP_GRADIENT_STOPS,
@@ -20,6 +17,9 @@ import {
 import {
   ROW_HEIGHT_PX
 } from "./chunk-CPMHA4W5.js";
+import {
+  el
+} from "./chunk-H2H4Y3TV.js";
 import {
   panSNContig
 } from "./chunk-2JL2JVZ2.js";

package/dist/chunks/{chunk-YQAZNH37.js → chunk-U2UPDVH4.js}

@@ -4,11 +4,11 @@ import {
 import {
   facetLifts,
   walkLift
-} from "./chunk-54C73ICS.js";
+} from "./chunk-27QSY2OI.js";
 import {
   buildGeometry,
   computeReferenceRamp
-} from "./chunk-53DZE3SA.js";
+} from "./chunk-GXCMBPC6.js";
 import {
   walkKey
 } from "./chunk-IZKM4NY7.js";
@@ -21,7 +21,7 @@ import {
 } from "./chunk-VQ353UDK.js";
 import {
   FIGURE_DEFAULTS
-} from "./chunk-2MXFG3W7.js";
+} from "./chunk-PYK4JKYW.js";
 import {
   drawingBounds
 } from "./chunk-JVT3XTKN.js";
@@ -110,6 +110,7 @@ function figureScene(graph, layout, o) {
       connectorThickness: o.connectorThickness ?? FIGURE_DEFAULTS.connectorThickness,
       drawPaths: false,
       nodeWidth,
+      edgeWidth: o.edgeWidth ?? FIGURE_DEFAULTS.edgeWidth,
       linearLayout: o.linearLayout,
       highlight,
       axis,

package/dist/cli/figure.js

@@ -6,41 +6,25 @@ import {
   backboneGenes
 } from "../chunks/chunk-376YFQOY.js";
 import "../chunks/chunk-EQDQ7P4Y.js";
-import {
-  figureSvg
-} from "../chunks/chunk-CHGTUO3C.js";
-import "../chunks/chunk-77O67GIB.js";
-import "../chunks/chunk-4DMSPNYV.js";
-import "../chunks/chunk-RBCE2OQH.js";
-import "../chunks/chunk-V4YML3GR.js";
-import {
-  genesOnRow,
-  placeRowGenes
-} from "../chunks/chunk-ALOF5SOT.js";
-import "../chunks/chunk-JSUCGZ6K.js";
-import "../chunks/chunk-TQ26XEFL.js";
-import "../chunks/chunk-4JDO7ZLN.js";
-import "../chunks/chunk-7YSIP3O2.js";
-import "../chunks/chunk-H2H4Y3TV.js";
 import {
   laidOutGraph,
   walkLayers
-} from "../chunks/chunk-55DRWHBF.js";
+} from "../chunks/chunk-4CK2SN7U.js";
 import {
   LAYOUT_ENGINE_VALUES,
   isLayoutEngineKind
 } from "../chunks/chunk-CO6RGQAD.js";
 import {
   LAYOUT_MODES
-} from "../chunks/chunk-ARXDNQLF.js";
+} from "../chunks/chunk-WE7CLY2E.js";
+import "../chunks/chunk-XR2HMGAS.js";
 import "../chunks/chunk-BDS5VZYZ.js";
 import "../chunks/chunk-KKHXMJEE.js";
-import "../chunks/chunk-XR2HMGAS.js";
 import "../chunks/chunk-GJLZ2MKE.js";
 import "../chunks/chunk-MYLAJDKB.js";
 import "../chunks/chunk-5OJZV6YT.js";
-import "../chunks/chunk-UAFATXYA.js";
 import "../chunks/chunk-3GLG3ZLE.js";
+import "../chunks/chunk-UAFATXYA.js";
 import {
   cutGbzRegion,
   gbzLocations,
@@ -50,14 +34,29 @@ import {
 } from "../chunks/chunk-FNDNSDKW.js";
 import "../chunks/chunk-ZKSC7QVE.js";
 import "../chunks/chunk-HNWJ4B7S.js";
+import {
+  figureSvg
+} from "../chunks/chunk-LF7V3QSH.js";
+import "../chunks/chunk-V4YML3GR.js";
+import "../chunks/chunk-KYTV5EAZ.js";
+import "../chunks/chunk-4DMSPNYV.js";
+import "../chunks/chunk-RBCE2OQH.js";
+import {
+  genesOnRow,
+  placeRowGenes
+} from "../chunks/chunk-SVP2CQTA.js";
+import "../chunks/chunk-JSUCGZ6K.js";
+import "../chunks/chunk-TQ26XEFL.js";
+import "../chunks/chunk-4JDO7ZLN.js";
+import "../chunks/chunk-7YSIP3O2.js";
 import "../chunks/chunk-HEYIAMTC.js";
-import "../chunks/chunk-2NCZ5YYN.js";
+import "../chunks/chunk-OWNGPF73.js";
 import "../chunks/chunk-3DHGSHC3.js";
-import "../chunks/chunk-YQAZNH37.js";
+import "../chunks/chunk-U2UPDVH4.js";
 import "../chunks/chunk-LOCJN3BZ.js";
-import "../chunks/chunk-54C73ICS.js";
-import "../chunks/chunk-UVRCXTBY.js";
-import "../chunks/chunk-53DZE3SA.js";
+import "../chunks/chunk-27QSY2OI.js";
+import "../chunks/chunk-EB4Q35QD.js";
+import "../chunks/chunk-GXCMBPC6.js";
 import "../chunks/chunk-4KBZ7WPP.js";
 import "../chunks/chunk-G2FD7S3C.js";
 import "../chunks/chunk-IZKM4NY7.js";
@@ -71,7 +70,7 @@ import {
 import "../chunks/chunk-LODKC7PJ.js";
 import "../chunks/chunk-VQ353UDK.js";
 import "../chunks/chunk-ZANALBSX.js";
-import "../chunks/chunk-2MXFG3W7.js";
+import "../chunks/chunk-PYK4JKYW.js";
 import "../chunks/chunk-JVT3XTKN.js";
 import "../chunks/chunk-OPPVSPEF.js";
 import "../chunks/chunk-NAYS472K.js";
@@ -101,6 +100,8 @@ import "../chunks/chunk-ZPZ7GNBT.js";
 import "../chunks/chunk-BSOZW3FC.js";
 import "../chunks/chunk-RJWPJCIB.js";
 import "../chunks/chunk-HOAIOEI7.js";
+import "../chunks/chunk-DAEEMZ74.js";
+import "../chunks/chunk-H2H4Y3TV.js";
 import "../chunks/chunk-BLUEFYIR.js";
 import "../chunks/chunk-2JL2JVZ2.js";
 

package/dist/edgeWidths.js

@@ -0,0 +1,10 @@
+import {
+  EDGE_WIDTHS,
+  busiestEdge,
+  edgeWidthFactor
+} from "./chunks/chunk-DAEEMZ74.js";
+export {
+  EDGE_WIDTHS,
+  busiestEdge,
+  edgeWidthFactor
+};

package/dist/figure.js

@@ -1,24 +1,23 @@
 import {
   figureSvg
-} from "./chunks/chunk-CHGTUO3C.js";
-import "./chunks/chunk-77O67GIB.js";
+} from "./chunks/chunk-LF7V3QSH.js";
+import "./chunks/chunk-V4YML3GR.js";
+import "./chunks/chunk-KYTV5EAZ.js";
 import "./chunks/chunk-4DMSPNYV.js";
 import "./chunks/chunk-RBCE2OQH.js";
-import "./chunks/chunk-V4YML3GR.js";
-import "./chunks/chunk-ALOF5SOT.js";
+import "./chunks/chunk-SVP2CQTA.js";
 import "./chunks/chunk-JSUCGZ6K.js";
 import "./chunks/chunk-TQ26XEFL.js";
 import "./chunks/chunk-4JDO7ZLN.js";
 import "./chunks/chunk-7YSIP3O2.js";
-import "./chunks/chunk-H2H4Y3TV.js";
 import "./chunks/chunk-HEYIAMTC.js";
-import "./chunks/chunk-2NCZ5YYN.js";
+import "./chunks/chunk-OWNGPF73.js";
 import "./chunks/chunk-3DHGSHC3.js";
-import "./chunks/chunk-YQAZNH37.js";
+import "./chunks/chunk-U2UPDVH4.js";
 import "./chunks/chunk-LOCJN3BZ.js";
-import "./chunks/chunk-54C73ICS.js";
-import "./chunks/chunk-UVRCXTBY.js";
-import "./chunks/chunk-53DZE3SA.js";
+import "./chunks/chunk-27QSY2OI.js";
+import "./chunks/chunk-EB4Q35QD.js";
+import "./chunks/chunk-GXCMBPC6.js";
 import "./chunks/chunk-4KBZ7WPP.js";
 import "./chunks/chunk-G2FD7S3C.js";
 import "./chunks/chunk-IZKM4NY7.js";
@@ -29,7 +28,7 @@ import "./chunks/chunk-C3KAPREU.js";
 import "./chunks/chunk-LODKC7PJ.js";
 import "./chunks/chunk-VQ353UDK.js";
 import "./chunks/chunk-ZANALBSX.js";
-import "./chunks/chunk-2MXFG3W7.js";
+import "./chunks/chunk-PYK4JKYW.js";
 import "./chunks/chunk-JVT3XTKN.js";
 import "./chunks/chunk-OPPVSPEF.js";
 import "./chunks/chunk-NAYS472K.js";
@@ -59,6 +58,8 @@ import "./chunks/chunk-ZPZ7GNBT.js";
 import "./chunks/chunk-BSOZW3FC.js";
 import "./chunks/chunk-RJWPJCIB.js";
 import "./chunks/chunk-HOAIOEI7.js";
+import "./chunks/chunk-DAEEMZ74.js";
+import "./chunks/chunk-H2H4Y3TV.js";
 import "./chunks/chunk-BLUEFYIR.js";
 import "./chunks/chunk-2JL2JVZ2.js";
 export {

package/dist/figureData.js

@@ -3,28 +3,28 @@ import {
   gfaFigureData,
   laidOutGraph,
   walkLayers
-} from "./chunks/chunk-55DRWHBF.js";
+} from "./chunks/chunk-4CK2SN7U.js";
 import "./chunks/chunk-CO6RGQAD.js";
-import "./chunks/chunk-ARXDNQLF.js";
+import "./chunks/chunk-WE7CLY2E.js";
+import "./chunks/chunk-XR2HMGAS.js";
 import "./chunks/chunk-BDS5VZYZ.js";
 import "./chunks/chunk-KKHXMJEE.js";
-import "./chunks/chunk-XR2HMGAS.js";
 import "./chunks/chunk-GJLZ2MKE.js";
 import "./chunks/chunk-MYLAJDKB.js";
 import "./chunks/chunk-5OJZV6YT.js";
-import "./chunks/chunk-UAFATXYA.js";
 import "./chunks/chunk-3GLG3ZLE.js";
+import "./chunks/chunk-UAFATXYA.js";
 import "./chunks/chunk-FNDNSDKW.js";
 import "./chunks/chunk-ZKSC7QVE.js";
 import "./chunks/chunk-HNWJ4B7S.js";
 import "./chunks/chunk-HEYIAMTC.js";
-import "./chunks/chunk-2NCZ5YYN.js";
+import "./chunks/chunk-OWNGPF73.js";
 import "./chunks/chunk-3DHGSHC3.js";
-import "./chunks/chunk-YQAZNH37.js";
+import "./chunks/chunk-U2UPDVH4.js";
 import "./chunks/chunk-LOCJN3BZ.js";
-import "./chunks/chunk-54C73ICS.js";
-import "./chunks/chunk-UVRCXTBY.js";
-import "./chunks/chunk-53DZE3SA.js";
+import "./chunks/chunk-27QSY2OI.js";
+import "./chunks/chunk-EB4Q35QD.js";
+import "./chunks/chunk-GXCMBPC6.js";
 import "./chunks/chunk-4KBZ7WPP.js";
 import "./chunks/chunk-G2FD7S3C.js";
 import "./chunks/chunk-IZKM4NY7.js";
@@ -35,7 +35,7 @@ import "./chunks/chunk-C3KAPREU.js";
 import "./chunks/chunk-LODKC7PJ.js";
 import "./chunks/chunk-VQ353UDK.js";
 import "./chunks/chunk-ZANALBSX.js";
-import "./chunks/chunk-2MXFG3W7.js";
+import "./chunks/chunk-PYK4JKYW.js";
 import "./chunks/chunk-JVT3XTKN.js";
 import "./chunks/chunk-OPPVSPEF.js";
 import "./chunks/chunk-NAYS472K.js";
@@ -65,6 +65,7 @@ import "./chunks/chunk-ZPZ7GNBT.js";
 import "./chunks/chunk-BSOZW3FC.js";
 import "./chunks/chunk-RJWPJCIB.js";
 import "./chunks/chunk-HOAIOEI7.js";
+import "./chunks/chunk-DAEEMZ74.js";
 import "./chunks/chunk-BLUEFYIR.js";
 import "./chunks/chunk-2JL2JVZ2.js";
 export {

package/dist/figureScene.js

@@ -1,10 +1,10 @@
 import {
   figureScene
-} from "./chunks/chunk-YQAZNH37.js";
+} from "./chunks/chunk-U2UPDVH4.js";
 import "./chunks/chunk-LOCJN3BZ.js";
-import "./chunks/chunk-54C73ICS.js";
-import "./chunks/chunk-UVRCXTBY.js";
-import "./chunks/chunk-53DZE3SA.js";
+import "./chunks/chunk-27QSY2OI.js";
+import "./chunks/chunk-EB4Q35QD.js";
+import "./chunks/chunk-GXCMBPC6.js";
 import "./chunks/chunk-4KBZ7WPP.js";
 import "./chunks/chunk-G2FD7S3C.js";
 import "./chunks/chunk-IZKM4NY7.js";
@@ -15,7 +15,7 @@ import "./chunks/chunk-C3KAPREU.js";
 import "./chunks/chunk-LODKC7PJ.js";
 import "./chunks/chunk-VQ353UDK.js";
 import "./chunks/chunk-ZANALBSX.js";
-import "./chunks/chunk-2MXFG3W7.js";
+import "./chunks/chunk-PYK4JKYW.js";
 import "./chunks/chunk-JVT3XTKN.js";
 import "./chunks/chunk-OPPVSPEF.js";
 import "./chunks/chunk-NAYS472K.js";
@@ -45,6 +45,7 @@ import "./chunks/chunk-ZPZ7GNBT.js";
 import "./chunks/chunk-BSOZW3FC.js";
 import "./chunks/chunk-RJWPJCIB.js";
 import "./chunks/chunk-HOAIOEI7.js";
+import "./chunks/chunk-DAEEMZ74.js";
 import "./chunks/chunk-BLUEFYIR.js";
 import "./chunks/chunk-2JL2JVZ2.js";
 export {

package/dist/figureSettings.js

@@ -1,7 +1,7 @@
 import {
   FIGURE_DEFAULTS,
   figureSpecSettings
-} from "./chunks/chunk-2MXFG3W7.js";
+} from "./chunks/chunk-PYK4JKYW.js";
 import "./chunks/chunk-JVT3XTKN.js";
 import "./chunks/chunk-OPPVSPEF.js";
 import "./chunks/chunk-NAYS472K.js";

package/dist/index.js

@@ -1,6 +1,13 @@
 import {
   wheelZoomFactor
 } from "./chunks/chunk-TDQLINVI.js";
+import {
+  drawTubeMap,
+  drawTubeMapHighlight,
+  tubeMapMismatchAt,
+  tubeMapPicture,
+  tubeMapTrackAt
+} from "./chunks/chunk-HIN56TLA.js";
 import {
   tubeMapFrame,
   tubeMapNodeAt
@@ -9,9 +16,14 @@ import {
   drawTubeMapGenes,
   tubeMapGenes
 } from "./chunks/chunk-RT4U3DH3.js";
+import "./chunks/chunk-BX4AUMZE.js";
 import {
   tubeMapNodeColors
-} from "./chunks/chunk-337LZP7C.js";
+} from "./chunks/chunk-I5HVXRAO.js";
+import {
+  referenceKnots,
+  warpX
+} from "./chunks/chunk-MYDHU2UV.js";
 import {
   bundleRoutes
 } from "./chunks/chunk-S6E3PMH7.js";
@@ -27,18 +39,6 @@ import {
   rulerBoxes,
   tubeX
 } from "./chunks/chunk-I53QYITQ.js";
-import {
-  drawTubeMap,
-  drawTubeMapHighlight,
-  tubeMapMismatchAt,
-  tubeMapPicture,
-  tubeMapTrackAt
-} from "./chunks/chunk-HIN56TLA.js";
-import "./chunks/chunk-BX4AUMZE.js";
-import {
-  referenceKnots,
-  warpX
-} from "./chunks/chunk-MYDHU2UV.js";
 import {
   ribbonJoin,
   sharedRowOrder,
@@ -48,6 +48,15 @@ import {
 import {
   createForceLayoutCache
 } from "./chunks/chunk-2A6Z2DHF.js";
+import {
+  backboneGenes
+} from "./chunks/chunk-376YFQOY.js";
+import {
+  genesFromBed,
+  genesFromGff3Lines,
+  genesFromText,
+  mergeOverlappingByName
+} from "./chunks/chunk-EQDQ7P4Y.js";
 import {
   graphBubbles,
   superbubblesFromGraph
@@ -68,21 +77,16 @@ import "./chunks/chunk-FX4RDMDN.js";
 import {
   bubbleSubgraph
 } from "./chunks/chunk-MHZTTLBU.js";
-import {
-  backboneGenes
-} from "./chunks/chunk-376YFQOY.js";
-import {
-  genesFromBed,
-  genesFromGff3Lines,
-  genesFromText,
-  mergeOverlappingByName
-} from "./chunks/chunk-EQDQ7P4Y.js";
 import {
   REFERENCE_STRIP_ZONE_PX,
   drawReferenceStrip,
   referenceStripBlocks,
   stripBlockAt
-} from "./chunks/chunk-SPEB75UH.js";
+} from "./chunks/chunk-LNLYK3Y5.js";
+import {
+  edgeHoverText,
+  regionLabel
+} from "./chunks/chunk-AZFVORTC.js";
 import {
   LAYOUT_QUALITIES
 } from "./chunks/chunk-K5SIJGAE.js";
@@ -91,12 +95,49 @@ import {
   parseLocus
 } from "./chunks/chunk-PQIFYQVI.js";
 import {
-  edgeHoverText,
-  regionLabel
-} from "./chunks/chunk-AZFVORTC.js";
+  figureData,
+  gfaFigureData
+} from "./chunks/chunk-4CK2SN7U.js";
+import {
+  LAYOUT_ENGINES,
+  layoutEngine
+} from "./chunks/chunk-CO6RGQAD.js";
+import {
+  FORCE_LAYOUT_LABEL,
+  LAYOUT_MODES,
+  layoutModeByValue,
+  modeUsesLayoutEngine
+} from "./chunks/chunk-WE7CLY2E.js";
+import "./chunks/chunk-XR2HMGAS.js";
+import "./chunks/chunk-BDS5VZYZ.js";
+import "./chunks/chunk-KKHXMJEE.js";
+import "./chunks/chunk-GJLZ2MKE.js";
+import "./chunks/chunk-MYLAJDKB.js";
+import "./chunks/chunk-5OJZV6YT.js";
+import "./chunks/chunk-3GLG3ZLE.js";
+import "./chunks/chunk-UAFATXYA.js";
+import {
+  HPRC_GBZ,
+  cutGbzRegion,
+  openGbz,
+  parseRegion
+} from "./chunks/chunk-FNDNSDKW.js";
+import {
+  compactTables,
+  cutWindowGFA,
+  cutWindowTables,
+  haplotypeWanted,
+  referencePathQuery,
+  referenceSamplesOf,
+  resolveReferenceSample
+} from "./chunks/chunk-ZKSC7QVE.js";
+import "./chunks/chunk-HNWJ4B7S.js";
 import {
   figureSvg
-} from "./chunks/chunk-CHGTUO3C.js";
+} from "./chunks/chunk-LF7V3QSH.js";
+import {
+  svgCanvas
+} from "./chunks/chunk-V4YML3GR.js";
 import {
   WALK_STRIP_CEILING_PX,
   cutsWholeWalks,
@@ -108,16 +149,13 @@ import {
   walkStripApplies,
   walkStripFrame,
   walkStripLabelsTree
-} from "./chunks/chunk-77O67GIB.js";
+} from "./chunks/chunk-KYTV5EAZ.js";
 import {
   Canvas2DRenderer
 } from "./chunks/chunk-4DMSPNYV.js";
 import {
   getDpr
 } from "./chunks/chunk-RBCE2OQH.js";
-import {
-  svgCanvas
-} from "./chunks/chunk-V4YML3GR.js";
 import {
   BAR_PX,
   CALL_TICK,
@@ -145,7 +183,7 @@ import {
   walkRowsKey,
   walkRowsKeyTree,
   walkRowsTree
-} from "./chunks/chunk-ALOF5SOT.js";
+} from "./chunks/chunk-SVP2CQTA.js";
 import {
   EXON_COLOR,
   exonOutlineTree,
@@ -162,54 +200,12 @@ import {
   findHoveredNode
 } from "./chunks/chunk-4JDO7ZLN.js";
 import "./chunks/chunk-7YSIP3O2.js";
-import {
-  el,
-  serializeEl
-} from "./chunks/chunk-H2H4Y3TV.js";
-import {
-  figureData,
-  gfaFigureData
-} from "./chunks/chunk-55DRWHBF.js";
-import {
-  LAYOUT_ENGINES,
-  layoutEngine
-} from "./chunks/chunk-CO6RGQAD.js";
-import {
-  FORCE_LAYOUT_LABEL,
-  LAYOUT_MODES,
-  layoutModeByValue,
-  modeUsesLayoutEngine
-} from "./chunks/chunk-ARXDNQLF.js";
-import "./chunks/chunk-BDS5VZYZ.js";
-import "./chunks/chunk-KKHXMJEE.js";
-import "./chunks/chunk-XR2HMGAS.js";
-import "./chunks/chunk-GJLZ2MKE.js";
-import "./chunks/chunk-MYLAJDKB.js";
-import "./chunks/chunk-5OJZV6YT.js";
-import "./chunks/chunk-UAFATXYA.js";
-import "./chunks/chunk-3GLG3ZLE.js";
-import {
-  HPRC_GBZ,
-  cutGbzRegion,
-  openGbz,
-  parseRegion
-} from "./chunks/chunk-FNDNSDKW.js";
-import {
-  compactTables,
-  cutWindowGFA,
-  cutWindowTables,
-  haplotypeWanted,
-  referencePathQuery,
-  referenceSamplesOf,
-  resolveReferenceSample
-} from "./chunks/chunk-ZKSC7QVE.js";
-import "./chunks/chunk-HNWJ4B7S.js";
 import {
   genePins
 } from "./chunks/chunk-HEYIAMTC.js";
 import {
   version
-} from "./chunks/chunk-2NCZ5YYN.js";
+} from "./chunks/chunk-OWNGPF73.js";
 import {
   axisScaleOf,
   contains,
@@ -218,7 +214,7 @@ import {
   viewportOf,
   zoomAbout
 } from "./chunks/chunk-3DHGSHC3.js";
-import "./chunks/chunk-YQAZNH37.js";
+import "./chunks/chunk-U2UPDVH4.js";
 import {
   layoutGeometryInputs
 } from "./chunks/chunk-LOCJN3BZ.js";
@@ -226,7 +222,7 @@ import {
   facetLifts,
   walkHighlight,
   walkLift
-} from "./chunks/chunk-54C73ICS.js";
+} from "./chunks/chunk-27QSY2OI.js";
 import {
   WALK_FIELDS,
   WALK_SCHEMES,
@@ -234,11 +230,11 @@ import {
   encodingSwatchCss,
   resolveEncoding,
   schemeCss
-} from "./chunks/chunk-UVRCXTBY.js";
+} from "./chunks/chunk-EB4Q35QD.js";
 import {
   buildGeometry,
   computeReferenceRamp
-} from "./chunks/chunk-53DZE3SA.js";
+} from "./chunks/chunk-GXCMBPC6.js";
 import "./chunks/chunk-4KBZ7WPP.js";
 import "./chunks/chunk-G2FD7S3C.js";
 import {
@@ -283,7 +279,7 @@ import {
 import {
   FIGURE_DEFAULTS,
   figureSpecSettings
-} from "./chunks/chunk-2MXFG3W7.js";
+} from "./chunks/chunk-PYK4JKYW.js";
 import {
   ENGINE_DEFAULTS,
   FIT_PADDING,
@@ -366,6 +362,15 @@ import {
 import "./chunks/chunk-BSOZW3FC.js";
 import "./chunks/chunk-RJWPJCIB.js";
 import "./chunks/chunk-HOAIOEI7.js";
+import {
+  EDGE_WIDTHS,
+  busiestEdge,
+  edgeWidthFactor
+} from "./chunks/chunk-DAEEMZ74.js";
+import {
+  el,
+  serializeEl
+} from "./chunks/chunk-H2H4Y3TV.js";
 import {
   FACET_FIELDS,
   FACET_GAP_PX,
@@ -390,6 +395,7 @@ export {
   BUBBLE_SPREADS,
   COLOR_SCHEMES,
   Canvas2DRenderer,
+  EDGE_WIDTHS,
   END_STOP_TAG,
   ENGINE_DEFAULTS,
   EXON_COLOR,
@@ -444,6 +450,7 @@ export {
   bubblesFromGraph,
   buildGeometry,
   bundleRoutes,
+  busiestEdge,
   callTickInk,
   clampZoom,
   classifyBubble,
@@ -468,6 +475,7 @@ export {
   drawTubeMapRuler,
   drawingBounds,
   edgeHoverText,
+  edgeWidthFactor,
   el,
   encodingStops,
   encodingSwatchCss,

package/dist/layout/walkRowDraw.js

@@ -30,9 +30,8 @@ import {
   walkRowsKey,
   walkRowsKeyTree,
   walkRowsTree
-} from "../chunks/chunk-ALOF5SOT.js";
-import "../chunks/chunk-H2H4Y3TV.js";
-import "../chunks/chunk-53DZE3SA.js";
+} from "../chunks/chunk-SVP2CQTA.js";
+import "../chunks/chunk-GXCMBPC6.js";
 import "../chunks/chunk-4KBZ7WPP.js";
 import "../chunks/chunk-G2FD7S3C.js";
 import "../chunks/chunk-GQZVR5DW.js";
@@ -54,6 +53,8 @@ import "../chunks/chunk-ZPZ7GNBT.js";
 import "../chunks/chunk-BSOZW3FC.js";
 import "../chunks/chunk-RJWPJCIB.js";
 import "../chunks/chunk-HOAIOEI7.js";
+import "../chunks/chunk-DAEEMZ74.js";
+import "../chunks/chunk-H2H4Y3TV.js";
 import "../chunks/chunk-2JL2JVZ2.js";
 export {
   ABRIDGED_GAP,

package/dist/layout/walkStrip.js

@@ -9,12 +9,11 @@ import {
   walkStripApplies,
   walkStripFrame,
   walkStripLabelsTree
-} from "../chunks/chunk-77O67GIB.js";
+} from "../chunks/chunk-KYTV5EAZ.js";
 import {
   LABELLED_ROW_PX
-} from "../chunks/chunk-ALOF5SOT.js";
-import "../chunks/chunk-H2H4Y3TV.js";
-import "../chunks/chunk-53DZE3SA.js";
+} from "../chunks/chunk-SVP2CQTA.js";
+import "../chunks/chunk-GXCMBPC6.js";
 import "../chunks/chunk-4KBZ7WPP.js";
 import "../chunks/chunk-G2FD7S3C.js";
 import "../chunks/chunk-GQZVR5DW.js";
@@ -40,6 +39,8 @@ import "../chunks/chunk-ZPZ7GNBT.js";
 import "../chunks/chunk-BSOZW3FC.js";
 import "../chunks/chunk-RJWPJCIB.js";
 import "../chunks/chunk-HOAIOEI7.js";
+import "../chunks/chunk-DAEEMZ74.js";
+import "../chunks/chunk-H2H4Y3TV.js";
 import "../chunks/chunk-2JL2JVZ2.js";
 export {
   LABELLED_ROW_PX,

package/dist/layoutModes.js

@@ -4,15 +4,15 @@ import {
   LAYOUT_MODE_VALUES,
   layoutModeByValue,
   modeUsesLayoutEngine
-} from "./chunks/chunk-ARXDNQLF.js";
+} from "./chunks/chunk-WE7CLY2E.js";
+import "./chunks/chunk-XR2HMGAS.js";
 import "./chunks/chunk-BDS5VZYZ.js";
 import "./chunks/chunk-KKHXMJEE.js";
-import "./chunks/chunk-XR2HMGAS.js";
 import "./chunks/chunk-GJLZ2MKE.js";
 import "./chunks/chunk-MYLAJDKB.js";
 import "./chunks/chunk-5OJZV6YT.js";
-import "./chunks/chunk-UAFATXYA.js";
 import "./chunks/chunk-3GLG3ZLE.js";
+import "./chunks/chunk-UAFATXYA.js";
 import "./chunks/chunk-VCUOYVLC.js";
 import "./chunks/chunk-C3KAPREU.js";
 import "./chunks/chunk-LODKC7PJ.js";

package/dist/referenceStrip.js

@@ -7,8 +7,8 @@ import {
   stripBlockAt,
   stripOverhang,
   stripPixels
-} from "./chunks/chunk-SPEB75UH.js";
-import "./chunks/chunk-53DZE3SA.js";
+} from "./chunks/chunk-LNLYK3Y5.js";
+import "./chunks/chunk-GXCMBPC6.js";
 import "./chunks/chunk-4KBZ7WPP.js";
 import "./chunks/chunk-G2FD7S3C.js";
 import "./chunks/chunk-GQZVR5DW.js";
@@ -29,6 +29,7 @@ import "./chunks/chunk-ZPZ7GNBT.js";
 import "./chunks/chunk-BSOZW3FC.js";
 import "./chunks/chunk-RJWPJCIB.js";
 import "./chunks/chunk-HOAIOEI7.js";
+import "./chunks/chunk-DAEEMZ74.js";
 import "./chunks/chunk-2JL2JVZ2.js";
 export {
   REFERENCE_STRIP_PX,

package/dist/renderer/GeometryBuilder.js

@@ -11,7 +11,7 @@ import {
   getNodeColor,
   hslToRgb,
   rampFraction
-} from "../chunks/chunk-53DZE3SA.js";
+} from "../chunks/chunk-GXCMBPC6.js";
 import "../chunks/chunk-4KBZ7WPP.js";
 import "../chunks/chunk-G2FD7S3C.js";
 import {
@@ -34,6 +34,7 @@ import "../chunks/chunk-ZPZ7GNBT.js";
 import "../chunks/chunk-BSOZW3FC.js";
 import "../chunks/chunk-RJWPJCIB.js";
 import "../chunks/chunk-HOAIOEI7.js";
+import "../chunks/chunk-DAEEMZ74.js";
 import "../chunks/chunk-2JL2JVZ2.js";
 export {
   FADED_ALPHA,

package/dist/tubeMap/nodeColors.js

@@ -1,7 +1,7 @@
 import {
   tubeMapNodeColors
-} from "../chunks/chunk-337LZP7C.js";
-import "../chunks/chunk-53DZE3SA.js";
+} from "../chunks/chunk-I5HVXRAO.js";
+import "../chunks/chunk-GXCMBPC6.js";
 import "../chunks/chunk-4KBZ7WPP.js";
 import "../chunks/chunk-G2FD7S3C.js";
 import "../chunks/chunk-GQZVR5DW.js";
@@ -22,6 +22,7 @@ import "../chunks/chunk-ZPZ7GNBT.js";
 import "../chunks/chunk-BSOZW3FC.js";
 import "../chunks/chunk-RJWPJCIB.js";
 import "../chunks/chunk-HOAIOEI7.js";
+import "../chunks/chunk-DAEEMZ74.js";
 import "../chunks/chunk-2JL2JVZ2.js";
 export {
   tubeMapNodeColors

package/dist/types/edgeWidths.d.ts

@@ -0,0 +1,13 @@
+import type { Graph } from './types.js';
+export declare const EDGE_WIDTHS: readonly [{
+    readonly value: "uniform";
+    readonly label: "Uniform";
+    readonly description: "Every link the same thickness.";
+}, {
+    readonly value: "walks";
+    readonly label: "By walks";
+    readonly description: "Thicker the more walks take a link, on the square root of its count against the busiest link in the cut. A graph without walks draws uniform.";
+}];
+export type EdgeWidth = (typeof EDGE_WIDTHS)[number]['value'];
+export declare function busiestEdge(graph: Graph): number;
+export declare function edgeWidthFactor(walks: number, busiest: number, edgeWidth: EdgeWidth): number;

package/dist/types/figure.d.ts

@@ -1,4 +1,5 @@
 import type { ColorScheme } from './colorSchemes.js';
+import type { EdgeWidth } from './edgeWidths.js';
 import type { FacetInput } from './facetGrid.js';
 import type { GeneModel } from './genes/genePins.js';
 import type { GeneGaps, RowGene, RowPitch, WalkRowsWithCalls } from './layout/walkRowDraw.js';
@@ -13,6 +14,7 @@ export interface FigureOptions {
     facet?: FacetInput;
     colorScheme?: ColorScheme;
     nodeWidth?: NodeWidth;
+    edgeWidth?: EdgeWidth;
     showDeletionEdges?: boolean;
     linearLayout?: boolean;
     contigThickness?: number;

package/dist/types/figureData.d.ts

@@ -4,7 +4,7 @@ import type { LayoutEngineKind } from './layoutEngines.js';
 import type { LayoutModeValue } from './layoutModes.js';
 import type { Graph, LayoutResult } from './types.js';
 import type { WalkLayer } from './walkEncoding.js';
-export type FigureDataOptions = Pick<FigureOptions, 'width' | 'height' | 'walks' | 'facet' | 'colorScheme' | 'nodeWidth' | 'showDeletionEdges' | 'linearLayout' | 'contigThickness' | 'connectorThickness' | 'region' | 'referenceName' | 'colorDomain' | 'fitToDrawing' | 'genes'>;
+export type FigureDataOptions = Pick<FigureOptions, 'width' | 'height' | 'walks' | 'facet' | 'colorScheme' | 'nodeWidth' | 'edgeWidth' | 'showDeletionEdges' | 'linearLayout' | 'contigThickness' | 'connectorThickness' | 'region' | 'referenceName' | 'colorDomain' | 'fitToDrawing' | 'genes'>;
 type Columns<T> = {
     [K in keyof T]: T[K][];
 };

package/dist/types/figureScene.d.ts

@@ -2,7 +2,7 @@ import type { FigureOptions } from './figure.js';
 import type { Graph, LayoutResult } from './types.js';
 import type { AxisScale } from './util/geometry.js';
 import type { LiftedWalk, WalkLift } from './walkHighlight.js';
-export type FigureSceneOptions = Pick<FigureOptions, 'walks' | 'facet' | 'colorScheme' | 'nodeWidth' | 'showDeletionEdges' | 'linearLayout' | 'contigThickness' | 'connectorThickness' | 'region' | 'referenceName' | 'colorDomain' | 'fitToDrawing' | 'walkRows' | 'walkRowPitch'>;
+export type FigureSceneOptions = Pick<FigureOptions, 'walks' | 'facet' | 'colorScheme' | 'nodeWidth' | 'edgeWidth' | 'showDeletionEdges' | 'linearLayout' | 'contigThickness' | 'connectorThickness' | 'region' | 'referenceName' | 'colorDomain' | 'fitToDrawing' | 'walkRows' | 'walkRowPitch'>;
 export declare function figureScene(graph: Graph, layout: LayoutResult, o: FigureSceneOptions): {
     bounds: {
         minX: number;

package/dist/types/figureSettings.d.ts

@@ -1,4 +1,5 @@
 import type { ColorScheme } from './colorSchemes.js';
+import type { EdgeWidth } from './edgeWidths.js';
 import type { NodeWidth } from './nodeWidths.js';
 import type { EngineSettings } from './pipeline.js';
 export interface FigureSettings extends Partial<EngineSettings> {
@@ -6,6 +7,7 @@ export interface FigureSettings extends Partial<EngineSettings> {
     height?: number;
     colorScheme?: ColorScheme;
     nodeWidth?: NodeWidth;
+    edgeWidth?: EdgeWidth;
     contigThickness?: number;
     connectorThickness?: number;
     colorDomain?: {

package/dist/types/index.d.ts

@@ -14,6 +14,8 @@ export { COLOR_SCHEMES, resolveColorScheme } from './colorSchemes.js';
 export type { ColorScheme, ResolvedColorScheme } from './colorSchemes.js';
 export { NODE_WIDTHS, maxNodeWidthPx, meanDepth, nodeInk, nodeWidthPx, } from './nodeWidths.js';
 export type { NodeWidth } from './nodeWidths.js';
+export { EDGE_WIDTHS, busiestEdge, edgeWidthFactor } from './edgeWidths.js';
+export type { EdgeWidth } from './edgeWidths.js';
 export { BUBBLE_SPREADS } from './bubbleSpreads.js';
 export { LAYOUT_QUALITIES } from './layoutQualities.js';
 export type { LayoutQuality } from './layoutQualities.js';

package/dist/types/renderer/GeometryBuilder.d.ts

@@ -1,4 +1,5 @@
 import type { ResolvedColorScheme } from '../colorSchemes.js';
+import type { EdgeWidth } from '../edgeWidths.js';
 import type { DeletionRoutes } from '../layout/deletionRoutes.js';
 import type { NodeWidth } from '../nodeWidths.js';
 import type { Graph, GraphNode, NodeSegment } from '../types.js';
@@ -17,6 +18,7 @@ export interface BuildOptions {
     connectorThickness: number;
     drawPaths: boolean;
     nodeWidth?: NodeWidth;
+    edgeWidth?: EdgeWidth;
     highlight?: WalkLift;
     axis: AxisScale;
     linearLayout?: boolean;

package/dist/types/version.d.ts

@@ -1 +1 @@
-export declare const version = "11.10.0";
+export declare const version = "11.11.1";

package/dist/version.js

@@ -1,6 +1,6 @@
 import {
   version
-} from "./chunks/chunk-2NCZ5YYN.js";
+} from "./chunks/chunk-OWNGPF73.js";
 export {
   version
 };

package/dist/walkEncoding.js

@@ -10,8 +10,8 @@ import {
   schemeCss,
   schemeRgb,
   splitFamilies
-} from "./chunks/chunk-UVRCXTBY.js";
-import "./chunks/chunk-53DZE3SA.js";
+} from "./chunks/chunk-EB4Q35QD.js";
+import "./chunks/chunk-GXCMBPC6.js";
 import "./chunks/chunk-4KBZ7WPP.js";
 import "./chunks/chunk-G2FD7S3C.js";
 import "./chunks/chunk-GQZVR5DW.js";
@@ -32,6 +32,7 @@ import "./chunks/chunk-ZPZ7GNBT.js";
 import "./chunks/chunk-BSOZW3FC.js";
 import "./chunks/chunk-RJWPJCIB.js";
 import "./chunks/chunk-HOAIOEI7.js";
+import "./chunks/chunk-DAEEMZ74.js";
 import "./chunks/chunk-2JL2JVZ2.js";
 export {
   NO_VALUE_COLOR,

package/dist/walkHighlight.js

@@ -2,9 +2,9 @@ import {
   facetLifts,
   walkHighlight,
   walkLift
-} from "./chunks/chunk-54C73ICS.js";
-import "./chunks/chunk-UVRCXTBY.js";
-import "./chunks/chunk-53DZE3SA.js";
+} from "./chunks/chunk-27QSY2OI.js";
+import "./chunks/chunk-EB4Q35QD.js";
+import "./chunks/chunk-GXCMBPC6.js";
 import "./chunks/chunk-4KBZ7WPP.js";
 import "./chunks/chunk-G2FD7S3C.js";
 import "./chunks/chunk-GQZVR5DW.js";
@@ -26,6 +26,7 @@ import "./chunks/chunk-ZPZ7GNBT.js";
 import "./chunks/chunk-BSOZW3FC.js";
 import "./chunks/chunk-RJWPJCIB.js";
 import "./chunks/chunk-HOAIOEI7.js";
+import "./chunks/chunk-DAEEMZ74.js";
 import "./chunks/chunk-2JL2JVZ2.js";
 export {
   facetLifts,

package/package.json

@@ -1,6 +1,6 @@
 {
   "name": "@jbrowse/bandage-core",
-  "version": "11.10.0",
+  "version": "11.11.1",
   "description": "Pangenome graph layout and drawing with no host: GFA in, the Bandage force-directed engine and reference-anchored layouts, a Canvas2D renderer, hit testing and labels out",
   "license": "GPL-3.0-or-later",
   "repository": {

package/dist/chunks/{chunk-ARXDNQLF.js → chunk-WE7CLY2E.js}

@@ -1,12 +1,12 @@
+import {
+  sampleRowLayout
+} from "./chunk-XR2HMGAS.js";
 import {
   hasTubeMapBackbone,
   hasTubeMapPaths,
   tubeMapLayout,
   tubeMapReferenceLayout
 } from "./chunk-BDS5VZYZ.js";
-import {
-  sampleRowLayout
-} from "./chunk-XR2HMGAS.js";
 import {
   anchoredLayout
 } from "./chunk-GJLZ2MKE.js";