@jbrowse/bandage-core 10.0.1 → 10.2.0
This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
- package/README.md +3 -0
- package/dist/bubbles/popBubble.js +2 -2
- package/dist/bubbles/superbubbles.js +3 -3
- package/dist/chunks/{chunk-IFOZFVZK.js → chunk-4R6QNG23.js} +2 -2
- package/dist/chunks/{chunk-KJYSOHVN.js → chunk-5BGP5Z64.js} +1 -1
- package/dist/chunks/{chunk-B4645SM2.js → chunk-AFP3NWSL.js} +45 -16
- package/dist/chunks/{chunk-VOWI544A.js → chunk-ALDGONEI.js} +1 -1
- package/dist/chunks/{chunk-3XE3OUEN.js → chunk-C7MZJSPT.js} +1 -1
- package/dist/chunks/{chunk-AZJF2PZE.js → chunk-CPVZGVDL.js} +8 -8
- package/dist/chunks/{chunk-CFNFT4RA.js → chunk-CRTD2SBP.js} +1 -1
- package/dist/chunks/{chunk-IM4SJUPO.js → chunk-DK5P2YOL.js} +2 -2
- package/dist/chunks/{chunk-FLUQODT2.js → chunk-DT2GGH4D.js} +1 -1
- package/dist/chunks/{chunk-FFFYXMOP.js → chunk-EDR4CGCQ.js} +10 -10
- package/dist/chunks/{chunk-BEWLQADP.js → chunk-FNGIQF43.js} +1 -1
- package/dist/chunks/{chunk-OEPCRURR.js → chunk-GNTTI6LA.js} +1 -1
- package/dist/chunks/{chunk-HQ2AHRMH.js → chunk-IUDJKOLB.js} +1 -1
- package/dist/chunks/{chunk-QXAB2FLJ.js → chunk-IW6CYVX2.js} +1 -1
- package/dist/chunks/{chunk-QORSYW7J.js → chunk-L5WF4ZPS.js} +1 -1
- package/dist/chunks/{chunk-KY4LV2Z6.js → chunk-M3NPTHSE.js} +1 -1
- package/dist/chunks/{chunk-EMUUNWRU.js → chunk-M6LK4GII.js} +7 -1
- package/dist/chunks/{chunk-ZR7A7DKQ.js → chunk-MVFDSFV2.js} +1 -1
- package/dist/chunks/{chunk-FG762CCP.js → chunk-PKFMP65V.js} +2 -2
- package/dist/chunks/{chunk-QIVPRZ4H.js → chunk-R456ME6J.js} +2 -2
- package/dist/chunks/{chunk-A647OH7N.js → chunk-RIPAA7OK.js} +1 -1
- package/dist/chunks/{chunk-WI7ZHJ27.js → chunk-RPDXZLCG.js} +2 -2
- package/dist/chunks/{chunk-NP356MC2.js → chunk-SBMJNRTV.js} +1 -1
- package/dist/chunks/{chunk-4QTNXTGW.js → chunk-T6V4KI2L.js} +1 -1
- package/dist/chunks/{chunk-REE4GUDM.js → chunk-TWRLC3KK.js} +1 -1
- package/dist/chunks/{chunk-MSX3BDO4.js → chunk-XTCNEKO5.js} +2 -2
- package/dist/chunks/{chunk-VZNKA3K2.js → chunk-XYP6WL2N.js} +7 -3
- package/dist/chunks/{chunk-DCJC32QW.js → chunk-ZIUKZUPJ.js} +1 -1
- package/dist/cli/figure.js +18 -18
- package/dist/cli/fold.js +4 -4
- package/dist/figure.js +15 -15
- package/dist/figureData.js +15 -15
- package/dist/figureSettings.js +4 -4
- package/dist/foldVariants.js +1 -1
- package/dist/gfa/gfaConverter.js +2 -2
- package/dist/index.js +27 -27
- package/dist/layout/forceCache.js +4 -4
- package/dist/layout/trimToWindow.js +1 -1
- package/dist/layout/tubeMapLayout.js +3 -3
- package/dist/layout/walkRowDraw.js +5 -5
- package/dist/layout/walkRowLayout.js +3 -3
- package/dist/layout/walkRows.js +2 -2
- package/dist/layout/walkStrip.js +6 -6
- package/dist/layoutEngines.js +1 -1
- package/dist/layoutModes.js +6 -6
- package/dist/pathAnchoring.js +1 -1
- package/dist/pathColors.js +2 -2
- package/dist/pipeline.js +3 -3
- package/dist/referenceRampCss.js +4 -4
- package/dist/referenceStrip.js +4 -4
- package/dist/renderer/GeometryBuilder.js +3 -3
- package/dist/tubeMap/bundle.js +4 -4
- package/dist/tubeMap/coarsen.js +3 -3
- package/dist/tubeMap/draw.js +2 -2
- package/dist/tubeMap/nodeColors.js +4 -4
- package/dist/types/layoutEngines.d.ts +1 -1
- package/dist/types/version.d.ts +1 -1
- package/dist/version.js +1 -1
- package/dist/viewport.js +4 -4
- package/dist/walkEncoding.js +4 -4
- package/dist/walkHighlight.js +5 -5
- package/package.json +1 -1
package/dist/cli/figure.js
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package/dist/figureSettings.js
CHANGED
|
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import {
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|
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package/dist/foldVariants.js
CHANGED
package/dist/gfa/gfaConverter.js
CHANGED
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|
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|
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CHANGED
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|
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warpX
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drawLitConnector,
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bubbleSubgraph
|
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import {
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|
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|
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+
} from "./chunks/chunk-MVFDSFV2.js";
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|
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|
|
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walkStripFrame,
|
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|
|
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|
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} from "./chunks/chunk-
|
|
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|
+
} from "./chunks/chunk-RPDXZLCG.js";
|
|
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|
import {
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|
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|
Canvas2DRenderer
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|
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|
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walkRowsKeyTree,
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|
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|
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} from "./chunks/chunk-
|
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|
+
} from "./chunks/chunk-XYP6WL2N.js";
|
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import {
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EXON_COLOR,
|
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exonOutlineTree,
|
|
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|
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} from "./chunks/chunk-
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+
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import {
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LEGEND_INSET_PX,
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|
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|
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|
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|
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|
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|
+
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|
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|
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|
layoutEngine
|
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|
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} from "./chunks/chunk-
|
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+
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|
import {
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|
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|
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|
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|
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|
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|
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|
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|
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|
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} from "./chunks/chunk-
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|
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|
contains,
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|
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|
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|
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|
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|
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|
+
} from "./chunks/chunk-L5WF4ZPS.js";
|
|
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|
import {
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|
|
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|
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|
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|
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|
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|
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|
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|
+
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|
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237
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|
|
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|
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|
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|
import {
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|
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|
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|
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|
|
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|
|
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|
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|
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|
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|
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|
|
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|
graphTablesGFA
|
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|
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|
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|
import {
|
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PathVisits,
|
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|
PathVisitsBuilder
|
|
@@ -1,16 +1,16 @@
|
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|
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1
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import {
|
|
2
2
|
createForceLayoutCache
|
|
3
|
-
} from "../chunks/chunk-
|
|
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|
-
import "../chunks/chunk-
|
|
3
|
+
} from "../chunks/chunk-CRTD2SBP.js";
|
|
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|
+
import "../chunks/chunk-XTCNEKO5.js";
|
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|
import "../chunks/chunk-IGVV37VI.js";
|
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|
import "../chunks/chunk-OPPVSPEF.js";
|
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|
import "../chunks/chunk-VPE4AYP7.js";
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|
import "../chunks/chunk-PUG7LXDF.js";
|
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|
-
import "../chunks/chunk-
|
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|
+
import "../chunks/chunk-IW6CYVX2.js";
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|
+
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|
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|
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|
import "../chunks/chunk-G45YY72K.js";
|
|
@@ -8,11 +8,11 @@ import {
|
|
|
8
8
|
tubeMapReferenceLayout,
|
|
9
9
|
tubeMapTracks,
|
|
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10
|
tubeWidth
|
|
11
|
-
} from "../chunks/chunk-
|
|
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|
+
} from "../chunks/chunk-DK5P2YOL.js";
|
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|
import "../chunks/chunk-CWFNEKST.js";
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|
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import "../chunks/chunk-
|
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import "../chunks/chunk-
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|
+
import "../chunks/chunk-TWRLC3KK.js";
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|
import "../chunks/chunk-3ZZSX5HN.js";
|
|
@@ -26,15 +26,15 @@ import {
|
|
|
26
26
|
walkRowsKey,
|
|
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27
|
walkRowsKeyTree,
|
|
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28
|
walkRowsTree
|
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|
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} from "../chunks/chunk-
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|
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|
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|
+
} from "../chunks/chunk-XYP6WL2N.js";
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+
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|
+
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|
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|
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|
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|
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39
|
import "../chunks/chunk-ES2N6V56.js";
|
|
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|
import "../chunks/chunk-BPLIXMH7.js";
|
|
@@ -2,9 +2,9 @@ import {
|
|
|
2
2
|
walkRowLabels,
|
|
3
3
|
walkRowLayout,
|
|
4
4
|
walkRowsExtent
|
|
5
|
-
} from "../chunks/chunk-
|
|
6
|
-
import "../chunks/chunk-
|
|
7
|
-
import "../chunks/chunk-
|
|
5
|
+
} from "../chunks/chunk-C7MZJSPT.js";
|
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6
|
+
import "../chunks/chunk-RIPAA7OK.js";
|
|
7
|
+
import "../chunks/chunk-M6LK4GII.js";
|
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8
|
import "../chunks/chunk-RAEABQNW.js";
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|
import "../chunks/chunk-BPLIXMH7.js";
|
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import "../chunks/chunk-CPMHA4W5.js";
|
package/dist/layout/walkRows.js
CHANGED
|
@@ -1,8 +1,8 @@
|
|
|
1
1
|
import {
|
|
2
2
|
filterSamples,
|
|
3
3
|
walkRows
|
|
4
|
-
} from "../chunks/chunk-
|
|
5
|
-
import "../chunks/chunk-
|
|
4
|
+
} from "../chunks/chunk-RIPAA7OK.js";
|
|
5
|
+
import "../chunks/chunk-M6LK4GII.js";
|
|
6
6
|
import "../chunks/chunk-RAEABQNW.js";
|
|
7
7
|
import "../chunks/chunk-BPLIXMH7.js";
|
|
8
8
|
import "../chunks/chunk-FYQWPEEY.js";
|
package/dist/layout/walkStrip.js
CHANGED
|
@@ -9,18 +9,18 @@ import {
|
|
|
9
9
|
walkStripApplies,
|
|
10
10
|
walkStripFrame,
|
|
11
11
|
walkStripLabelsTree
|
|
12
|
-
} from "../chunks/chunk-
|
|
12
|
+
} from "../chunks/chunk-RPDXZLCG.js";
|
|
13
13
|
import {
|
|
14
14
|
LABELLED_ROW_PX
|
|
15
|
-
} from "../chunks/chunk-
|
|
16
|
-
import "../chunks/chunk-
|
|
15
|
+
} from "../chunks/chunk-XYP6WL2N.js";
|
|
16
|
+
import "../chunks/chunk-ZIUKZUPJ.js";
|
|
17
17
|
import "../chunks/chunk-NNODIW4U.js";
|
|
18
|
-
import "../chunks/chunk-
|
|
18
|
+
import "../chunks/chunk-SBMJNRTV.js";
|
|
19
19
|
import "../chunks/chunk-G2FD7S3C.js";
|
|
20
20
|
import "../chunks/chunk-WFB5TXRA.js";
|
|
21
|
-
import "../chunks/chunk-
|
|
21
|
+
import "../chunks/chunk-TWRLC3KK.js";
|
|
22
22
|
import "../chunks/chunk-PBENCR5L.js";
|
|
23
|
-
import "../chunks/chunk-
|
|
23
|
+
import "../chunks/chunk-M6LK4GII.js";
|
|
24
24
|
import "../chunks/chunk-RAEABQNW.js";
|
|
25
25
|
import "../chunks/chunk-ES2N6V56.js";
|
|
26
26
|
import "../chunks/chunk-BPLIXMH7.js";
|
package/dist/layoutEngines.js
CHANGED
package/dist/layoutModes.js
CHANGED
|
@@ -4,19 +4,19 @@ import {
|
|
|
4
4
|
LAYOUT_MODE_VALUES,
|
|
5
5
|
layoutModeByValue,
|
|
6
6
|
modeUsesLayoutEngine
|
|
7
|
-
} from "./chunks/chunk-
|
|
7
|
+
} from "./chunks/chunk-4R6QNG23.js";
|
|
8
8
|
import "./chunks/chunk-LOEA5IHZ.js";
|
|
9
|
-
import "./chunks/chunk-
|
|
9
|
+
import "./chunks/chunk-DK5P2YOL.js";
|
|
10
10
|
import "./chunks/chunk-CWFNEKST.js";
|
|
11
11
|
import "./chunks/chunk-L3O7AWLI.js";
|
|
12
12
|
import "./chunks/chunk-TZFWUT2C.js";
|
|
13
13
|
import "./chunks/chunk-HNQPEMYE.js";
|
|
14
14
|
import "./chunks/chunk-C44YRP5F.js";
|
|
15
15
|
import "./chunks/chunk-RVS2QCOX.js";
|
|
16
|
-
import "./chunks/chunk-
|
|
17
|
-
import "./chunks/chunk-
|
|
18
|
-
import "./chunks/chunk-
|
|
19
|
-
import "./chunks/chunk-
|
|
16
|
+
import "./chunks/chunk-C7MZJSPT.js";
|
|
17
|
+
import "./chunks/chunk-RIPAA7OK.js";
|
|
18
|
+
import "./chunks/chunk-TWRLC3KK.js";
|
|
19
|
+
import "./chunks/chunk-M6LK4GII.js";
|
|
20
20
|
import "./chunks/chunk-RAEABQNW.js";
|
|
21
21
|
import "./chunks/chunk-ES2N6V56.js";
|
|
22
22
|
import "./chunks/chunk-BPLIXMH7.js";
|
package/dist/pathAnchoring.js
CHANGED
package/dist/pathColors.js
CHANGED
|
@@ -9,8 +9,8 @@ import {
|
|
|
9
9
|
pathHueAt,
|
|
10
10
|
pathLegend,
|
|
11
11
|
walkLabelsOf
|
|
12
|
-
} from "./chunks/chunk-
|
|
13
|
-
import "./chunks/chunk-
|
|
12
|
+
} from "./chunks/chunk-TWRLC3KK.js";
|
|
13
|
+
import "./chunks/chunk-M6LK4GII.js";
|
|
14
14
|
import "./chunks/chunk-RAEABQNW.js";
|
|
15
15
|
import "./chunks/chunk-BPLIXMH7.js";
|
|
16
16
|
import "./chunks/chunk-3ZZSX5HN.js";
|