@jbrowse/bandage-core 10.0.0 → 10.1.0

This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
Files changed (75) hide show
  1. package/README.md +23 -0
  2. package/dist/bubbles/popBubble.js +2 -2
  3. package/dist/bubbles/superbubbles.js +3 -3
  4. package/dist/chunks/{chunk-ICXMWYOA.js → chunk-4R6QNG23.js} +5 -5
  5. package/dist/chunks/{chunk-KJYSOHVN.js → chunk-5BGP5Z64.js} +1 -1
  6. package/dist/chunks/{chunk-VOWI544A.js → chunk-ALDGONEI.js} +1 -1
  7. package/dist/chunks/{chunk-3APK25GI.js → chunk-C7MZJSPT.js} +1 -1
  8. package/dist/chunks/{chunk-RJXPPYA7.js → chunk-CFPER2S2.js} +13 -13
  9. package/dist/chunks/{chunk-33T67FPZ.js → chunk-CRTD2SBP.js} +1 -1
  10. package/dist/chunks/{chunk-IM4SJUPO.js → chunk-DK5P2YOL.js} +2 -2
  11. package/dist/chunks/{chunk-VK6XMP6B.js → chunk-FLUQODT2.js} +1 -3
  12. package/dist/chunks/{chunk-BEWLQADP.js → chunk-FNGIQF43.js} +1 -1
  13. package/dist/chunks/{chunk-OEPCRURR.js → chunk-GNTTI6LA.js} +1 -1
  14. package/dist/chunks/{chunk-EU6FBTQF.js → chunk-IUDJKOLB.js} +4 -4
  15. package/dist/chunks/{chunk-QXAB2FLJ.js → chunk-IW6CYVX2.js} +1 -1
  16. package/dist/chunks/{chunk-OOLNLCIO.js → chunk-L5WF4ZPS.js} +1 -1
  17. package/dist/chunks/{chunk-EMUUNWRU.js → chunk-M6LK4GII.js} +7 -1
  18. package/dist/chunks/{chunk-E5UEYZWK.js → chunk-MVFDSFV2.js} +1 -1
  19. package/dist/chunks/{chunk-CDPYXHVR.js → chunk-MZIOBJZB.js} +1 -1
  20. package/dist/chunks/{chunk-FG762CCP.js → chunk-PKFMP65V.js} +2 -2
  21. package/dist/chunks/{chunk-QIVPRZ4H.js → chunk-R456ME6J.js} +2 -2
  22. package/dist/chunks/chunk-RIPAA7OK.js +284 -0
  23. package/dist/chunks/{chunk-WI7ZHJ27.js → chunk-RPDXZLCG.js} +2 -2
  24. package/dist/chunks/{chunk-NP356MC2.js → chunk-SBMJNRTV.js} +1 -1
  25. package/dist/chunks/{chunk-4QTNXTGW.js → chunk-T6V4KI2L.js} +1 -1
  26. package/dist/chunks/{chunk-REE4GUDM.js → chunk-TWRLC3KK.js} +1 -1
  27. package/dist/chunks/{chunk-Q6IOQP4J.js → chunk-VIERZJO2.js} +8 -8
  28. package/dist/chunks/{chunk-JVLURPFW.js → chunk-VPE4AYP7.js} +1 -2
  29. package/dist/chunks/{chunk-W4GZCVUK.js → chunk-XTCNEKO5.js} +7 -7
  30. package/dist/chunks/{chunk-VZNKA3K2.js → chunk-XYP6WL2N.js} +7 -3
  31. package/dist/chunks/{chunk-B4645SM2.js → chunk-YPYWYPHX.js} +3 -3
  32. package/dist/chunks/{chunk-DCJC32QW.js → chunk-ZIUKZUPJ.js} +1 -1
  33. package/dist/cli/figure.js +22 -24
  34. package/dist/cli/fold.js +5 -5
  35. package/dist/figure.js +16 -16
  36. package/dist/figureData.js +17 -19
  37. package/dist/figureSettings.js +5 -5
  38. package/dist/foldVariants.js +1 -1
  39. package/dist/gfa/gfaConverter.js +2 -2
  40. package/dist/index.js +50 -51
  41. package/dist/layout/deletionRoutes.js +1 -3
  42. package/dist/layout/forceCache.js +5 -5
  43. package/dist/layout/trimToWindow.js +1 -1
  44. package/dist/layout/tubeMapLayout.js +3 -3
  45. package/dist/layout/walkRowDraw.js +5 -5
  46. package/dist/layout/walkRowLayout.js +3 -3
  47. package/dist/layout/walkRows.js +2 -2
  48. package/dist/layout/walkStrip.js +6 -6
  49. package/dist/layoutEngines.js +1 -5
  50. package/dist/layoutModes.js +7 -7
  51. package/dist/pathAnchoring.js +1 -1
  52. package/dist/pathColors.js +2 -2
  53. package/dist/pipeline.js +4 -4
  54. package/dist/referenceRampCss.js +4 -4
  55. package/dist/referenceStrip.js +4 -4
  56. package/dist/renderer/GeometryBuilder.js +3 -3
  57. package/dist/tubeMap/bundle.js +4 -4
  58. package/dist/tubeMap/coarsen.js +3 -3
  59. package/dist/tubeMap/draw.js +3 -3
  60. package/dist/tubeMap/nodeColors.js +4 -4
  61. package/dist/types/index.d.ts +1 -1
  62. package/dist/types/layout/deletionRoutes.d.ts +0 -1
  63. package/dist/types/version.d.ts +1 -1
  64. package/dist/version.js +1 -1
  65. package/dist/viewport.js +5 -5
  66. package/dist/walkEncoding.js +4 -4
  67. package/dist/walkHighlight.js +5 -5
  68. package/package.json +2 -1
  69. package/dist/chunks/chunk-KAN2WTG5.js +0 -226
  70. package/dist/chunks/chunk-LYJ4US66.js +0 -664
  71. package/dist/chunks/chunk-Q6FRNVDU.js +0 -531
  72. package/dist/layout/stressEngine.js +0 -11
  73. package/dist/layout/stressPlacement.js +0 -7
  74. package/dist/types/layout/stressEngine.d.ts +0 -27
  75. package/dist/types/layout/stressPlacement.d.ts +0 -5
package/dist/index.js CHANGED
@@ -1,27 +1,17 @@
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  import {
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  wheelZoomFactor
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  } from "./chunks/chunk-TDQLINVI.js";
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- import {
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- connectorAt,
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- drawLitConnector,
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- drawTubeMapConnectors,
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- tubeMapConnectors
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- } from "./chunks/chunk-2ZT7ZF7A.js";
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  import {
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  drawTubeMap,
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  drawTubeMapHighlight,
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  tubeMapMismatchAt,
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  tubeMapPicture,
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  tubeMapTrackAt
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- } from "./chunks/chunk-EU6FBTQF.js";
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+ } from "./chunks/chunk-IUDJKOLB.js";
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  import {
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  tubeMapFrame,
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  tubeMapNodeAt
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  } from "./chunks/chunk-2CMYNW3E.js";
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- import {
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- referenceKnots,
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- warpX
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- } from "./chunks/chunk-HK5Y2YWV.js";
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  import {
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  drawTubeMapGenes,
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  tubeMapGenes
@@ -29,29 +19,39 @@ import {
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  import "./chunks/chunk-XXT2JCAC.js";
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  import {
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  tubeMapNodeColors
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- } from "./chunks/chunk-OEPCRURR.js";
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+ } from "./chunks/chunk-GNTTI6LA.js";
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+ import {
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+ referenceKnots,
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+ warpX
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+ } from "./chunks/chunk-HK5Y2YWV.js";
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+ import {
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+ bundleRoutes
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+ } from "./chunks/chunk-PKFMP65V.js";
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+ import {
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+ connectorAt,
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+ drawLitConnector,
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+ drawTubeMapConnectors,
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+ tubeMapConnectors
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+ } from "./chunks/chunk-2ZT7ZF7A.js";
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  import {
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  drawTubeMapRuler,
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  referenceBoxes,
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  rulerBoxes,
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  tubeX
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  } from "./chunks/chunk-BPRXQ2SS.js";
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- import {
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- bundleRoutes
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- } from "./chunks/chunk-FG762CCP.js";
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  import {
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  createForceLayoutCache
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- } from "./chunks/chunk-33T67FPZ.js";
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+ } from "./chunks/chunk-CRTD2SBP.js";
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  import {
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  graphBubbles,
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  superbubblesFromGraph
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- } from "./chunks/chunk-BEWLQADP.js";
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+ } from "./chunks/chunk-FNGIQF43.js";
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  import {
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  bubblesFromGraph
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  } from "./chunks/chunk-CLOP7UVD.js";
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  import {
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  bubbleSubgraph
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- } from "./chunks/chunk-4QTNXTGW.js";
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+ } from "./chunks/chunk-T6V4KI2L.js";
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  import {
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  genesFromBed,
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  genesFromGff3Lines,
@@ -73,21 +73,21 @@ import {
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  drawReferenceStrip,
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  referenceStripBlocks,
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  stripBlockAt
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- } from "./chunks/chunk-KJYSOHVN.js";
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+ } from "./chunks/chunk-5BGP5Z64.js";
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  import {
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  LAYOUT_QUALITIES
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  } from "./chunks/chunk-K5SIJGAE.js";
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  import {
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  FIGURE_DEFAULTS,
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  figureSpecSettings
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- } from "./chunks/chunk-E5UEYZWK.js";
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+ } from "./chunks/chunk-MVFDSFV2.js";
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  import {
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  edgeHoverText,
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  regionLabel
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  } from "./chunks/chunk-AZFVORTC.js";
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  import {
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  figureSvg
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- } from "./chunks/chunk-RJXPPYA7.js";
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+ } from "./chunks/chunk-CFPER2S2.js";
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  import {
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  svgCanvas
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  } from "./chunks/chunk-47DYCZOK.js";
@@ -102,7 +102,13 @@ import {
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  walkStripApplies,
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  walkStripFrame,
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  walkStripLabelsTree
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- } from "./chunks/chunk-WI7ZHJ27.js";
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+ } from "./chunks/chunk-RPDXZLCG.js";
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+ import {
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+ Canvas2DRenderer
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+ } from "./chunks/chunk-WBCOREDZ.js";
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+ import {
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+ getDpr
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+ } from "./chunks/chunk-4BYTEJGW.js";
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  import {
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  BAR_PX,
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  CALL_TICK,
@@ -129,13 +135,7 @@ import {
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  walkRowsKey,
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  walkRowsKeyTree,
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  walkRowsTree
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- } from "./chunks/chunk-VZNKA3K2.js";
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- import {
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- Canvas2DRenderer
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- } from "./chunks/chunk-WBCOREDZ.js";
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- import {
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- getDpr
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- } from "./chunks/chunk-4BYTEJGW.js";
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+ } from "./chunks/chunk-XYP6WL2N.js";
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  import {
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  EXON_COLOR,
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  exonOutlineTree,
@@ -149,7 +149,7 @@ import {
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  rampHue,
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  rampHueCss,
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  rampStops
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- } from "./chunks/chunk-DCJC32QW.js";
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+ } from "./chunks/chunk-ZIUKZUPJ.js";
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  import {
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  HALO_FACTOR,
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  LEGEND_INSET_PX,
@@ -168,24 +168,20 @@ import {
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  import {
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  figureData,
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  gfaFigureData
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- } from "./chunks/chunk-Q6IOQP4J.js";
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+ } from "./chunks/chunk-VIERZJO2.js";
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  import {
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  LAYOUT_ENGINES,
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  layoutEngine
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- } from "./chunks/chunk-VK6XMP6B.js";
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- import {
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- stressLayout
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- } from "./chunks/chunk-Q6FRNVDU.js";
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- import "./chunks/chunk-LYJ4US66.js";
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+ } from "./chunks/chunk-FLUQODT2.js";
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  import {
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  FORCE_LAYOUT_LABEL,
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  LAYOUT_MODES,
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  layoutModeByValue,
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  modeUsesLayoutEngine
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- } from "./chunks/chunk-ICXMWYOA.js";
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- import "./chunks/chunk-IM4SJUPO.js";
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- import "./chunks/chunk-CWFNEKST.js";
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+ } from "./chunks/chunk-4R6QNG23.js";
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  import "./chunks/chunk-LOEA5IHZ.js";
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+ import "./chunks/chunk-DK5P2YOL.js";
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+ import "./chunks/chunk-CWFNEKST.js";
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  import "./chunks/chunk-L3O7AWLI.js";
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  import "./chunks/chunk-TZFWUT2C.js";
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  import "./chunks/chunk-HNQPEMYE.js";
@@ -215,7 +211,7 @@ import {
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  } from "./chunks/chunk-LOCJN3BZ.js";
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  import {
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  version
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- } from "./chunks/chunk-CDPYXHVR.js";
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+ } from "./chunks/chunk-MZIOBJZB.js";
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  import {
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  axisScaleOf,
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  contains,
@@ -223,12 +219,12 @@ import {
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  screenToLayout,
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  viewportOf,
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  zoomAbout
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- } from "./chunks/chunk-OOLNLCIO.js";
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+ } from "./chunks/chunk-L5WF4ZPS.js";
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  import {
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  facetLifts,
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  walkHighlight,
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  walkLift
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- } from "./chunks/chunk-QIVPRZ4H.js";
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+ } from "./chunks/chunk-R456ME6J.js";
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  import {
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  WALK_FIELDS,
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  WALK_SCHEMES,
@@ -236,7 +232,7 @@ import {
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  encodingSwatchCss,
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  resolveEncoding,
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  schemeCss
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- } from "./chunks/chunk-VOWI544A.js";
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+ } from "./chunks/chunk-ALDGONEI.js";
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  import {
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  rangeText,
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  walkKey,
@@ -246,22 +242,22 @@ import {
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  REFERENCE_RAMP_MAX_HUE,
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  buildGeometry,
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  computeReferenceRamp
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- } from "./chunks/chunk-NP356MC2.js";
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+ } from "./chunks/chunk-SBMJNRTV.js";
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  import "./chunks/chunk-G2FD7S3C.js";
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  import "./chunks/chunk-WFB5TXRA.js";
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  import {
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  walkRowLabels,
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  walkRowsExtent
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- } from "./chunks/chunk-3APK25GI.js";
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+ } from "./chunks/chunk-C7MZJSPT.js";
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  import {
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  filterSamples,
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  walkRows
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- } from "./chunks/chunk-KAN2WTG5.js";
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+ } from "./chunks/chunk-RIPAA7OK.js";
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  import {
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  pathColorsLegible,
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  pathLegend,
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  walkLabelsOf
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- } from "./chunks/chunk-REE4GUDM.js";
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+ } from "./chunks/chunk-TWRLC3KK.js";
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  import {
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  NODE_WIDTHS,
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  maxNodeWidthPx,
@@ -281,19 +277,19 @@ import {
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  forceLayout,
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  layoutExtent,
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  loadGraph
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- } from "./chunks/chunk-W4GZCVUK.js";
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+ } from "./chunks/chunk-XTCNEKO5.js";
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  import "./chunks/chunk-IGVV37VI.js";
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  import "./chunks/chunk-OPPVSPEF.js";
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+ import "./chunks/chunk-VPE4AYP7.js";
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  import "./chunks/chunk-PUG7LXDF.js";
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- import "./chunks/chunk-QXAB2FLJ.js";
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+ import "./chunks/chunk-IW6CYVX2.js";
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  import "./chunks/chunk-QYBZZI5H.js";
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  import {
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  graphFromTables,
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  graphTablesGFA
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  } from "./chunks/chunk-PSMKPSO4.js";
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  import "./chunks/chunk-CDLPYR5O.js";
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- import "./chunks/chunk-JVLURPFW.js";
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- import "./chunks/chunk-EMUUNWRU.js";
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+ import "./chunks/chunk-M6LK4GII.js";
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  import {
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  PathVisits,
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  PathVisitsBuilder
@@ -352,6 +348,9 @@ import {
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  facetGrid,
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  facetSettingOf
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  } from "./chunks/chunk-XV4P5KEQ.js";
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+
352
+ // src/index.ts
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+ import { stressLayout } from "@jbrowse/graph-stress-layout";
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  export {
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  BUBBLE_KIND_COLORS,
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  BUBBLE_KIND_NAMES,
@@ -1,11 +1,9 @@
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  import {
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- ROUTE_ID,
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  routeNodes,
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  takeRoutes,
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  withDeletionRoutes
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- } from "../chunks/chunk-JVLURPFW.js";
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+ } from "../chunks/chunk-VPE4AYP7.js";
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  export {
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- ROUTE_ID,
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  routeNodes,
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  takeRoutes,
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  withDeletionRoutes
@@ -1,16 +1,16 @@
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  import {
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  createForceLayoutCache
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- } from "../chunks/chunk-33T67FPZ.js";
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- import "../chunks/chunk-W4GZCVUK.js";
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+ } from "../chunks/chunk-CRTD2SBP.js";
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+ import "../chunks/chunk-XTCNEKO5.js";
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  import "../chunks/chunk-IGVV37VI.js";
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  import "../chunks/chunk-OPPVSPEF.js";
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+ import "../chunks/chunk-VPE4AYP7.js";
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  import "../chunks/chunk-PUG7LXDF.js";
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- import "../chunks/chunk-QXAB2FLJ.js";
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+ import "../chunks/chunk-IW6CYVX2.js";
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  import "../chunks/chunk-QYBZZI5H.js";
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  import "../chunks/chunk-PSMKPSO4.js";
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  import "../chunks/chunk-CDLPYR5O.js";
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- import "../chunks/chunk-JVLURPFW.js";
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- import "../chunks/chunk-EMUUNWRU.js";
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+ import "../chunks/chunk-M6LK4GII.js";
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  import "../chunks/chunk-RAEABQNW.js";
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  import "../chunks/chunk-ES2N6V56.js";
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  import "../chunks/chunk-G45YY72K.js";
@@ -1,7 +1,7 @@
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  import {
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  pathOrigin,
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  trimOrigins
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- } from "../chunks/chunk-EMUUNWRU.js";
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+ } from "../chunks/chunk-M6LK4GII.js";
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  import {
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  PathVisitsBuilder
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  } from "../chunks/chunk-RAEABQNW.js";
@@ -8,11 +8,11 @@ import {
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  tubeMapReferenceLayout,
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  tubeMapTracks,
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  tubeWidth
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- } from "../chunks/chunk-IM4SJUPO.js";
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+ } from "../chunks/chunk-DK5P2YOL.js";
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  import "../chunks/chunk-CWFNEKST.js";
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  import "../chunks/chunk-C44YRP5F.js";
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- import "../chunks/chunk-REE4GUDM.js";
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- import "../chunks/chunk-EMUUNWRU.js";
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+ import "../chunks/chunk-TWRLC3KK.js";
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+ import "../chunks/chunk-M6LK4GII.js";
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  import "../chunks/chunk-RAEABQNW.js";
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  import "../chunks/chunk-BPLIXMH7.js";
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  import "../chunks/chunk-3ZZSX5HN.js";
@@ -26,15 +26,15 @@ import {
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  walkRowsKey,
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  walkRowsKeyTree,
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  walkRowsTree
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- } from "../chunks/chunk-VZNKA3K2.js";
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- import "../chunks/chunk-DCJC32QW.js";
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+ } from "../chunks/chunk-XYP6WL2N.js";
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+ import "../chunks/chunk-ZIUKZUPJ.js";
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  import "../chunks/chunk-NNODIW4U.js";
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- import "../chunks/chunk-NP356MC2.js";
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+ import "../chunks/chunk-SBMJNRTV.js";
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  import "../chunks/chunk-G2FD7S3C.js";
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  import "../chunks/chunk-WFB5TXRA.js";
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- import "../chunks/chunk-REE4GUDM.js";
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+ import "../chunks/chunk-TWRLC3KK.js";
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  import "../chunks/chunk-PBENCR5L.js";
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- import "../chunks/chunk-EMUUNWRU.js";
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+ import "../chunks/chunk-M6LK4GII.js";
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  import "../chunks/chunk-RAEABQNW.js";
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@@ -2,9 +2,9 @@ import {
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  walkRowLabels,
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  walkRowLayout,
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  walkRowsExtent
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- } from "../chunks/chunk-3APK25GI.js";
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- import "../chunks/chunk-KAN2WTG5.js";
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- import "../chunks/chunk-EMUUNWRU.js";
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+ } from "../chunks/chunk-C7MZJSPT.js";
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+ import "../chunks/chunk-RIPAA7OK.js";
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+ import "../chunks/chunk-M6LK4GII.js";
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@@ -1,8 +1,8 @@
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  import {
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  filterSamples,
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  walkRows
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- } from "../chunks/chunk-KAN2WTG5.js";
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- import "../chunks/chunk-EMUUNWRU.js";
4
+ } from "../chunks/chunk-RIPAA7OK.js";
5
+ import "../chunks/chunk-M6LK4GII.js";
6
6
  import "../chunks/chunk-RAEABQNW.js";
7
7
  import "../chunks/chunk-BPLIXMH7.js";
8
8
  import "../chunks/chunk-FYQWPEEY.js";
@@ -9,18 +9,18 @@ import {
9
9
  walkStripApplies,
10
10
  walkStripFrame,
11
11
  walkStripLabelsTree
12
- } from "../chunks/chunk-WI7ZHJ27.js";
12
+ } from "../chunks/chunk-RPDXZLCG.js";
13
13
  import {
14
14
  LABELLED_ROW_PX
15
- } from "../chunks/chunk-VZNKA3K2.js";
16
- import "../chunks/chunk-DCJC32QW.js";
15
+ } from "../chunks/chunk-XYP6WL2N.js";
16
+ import "../chunks/chunk-ZIUKZUPJ.js";
17
17
  import "../chunks/chunk-NNODIW4U.js";
18
- import "../chunks/chunk-NP356MC2.js";
18
+ import "../chunks/chunk-SBMJNRTV.js";
19
19
  import "../chunks/chunk-G2FD7S3C.js";
20
20
  import "../chunks/chunk-WFB5TXRA.js";
21
- import "../chunks/chunk-REE4GUDM.js";
21
+ import "../chunks/chunk-TWRLC3KK.js";
22
22
  import "../chunks/chunk-PBENCR5L.js";
23
- import "../chunks/chunk-EMUUNWRU.js";
23
+ import "../chunks/chunk-M6LK4GII.js";
24
24
  import "../chunks/chunk-RAEABQNW.js";
25
25
  import "../chunks/chunk-ES2N6V56.js";
26
26
  import "../chunks/chunk-BPLIXMH7.js";
@@ -3,12 +3,8 @@ import {
3
3
  LAYOUT_ENGINE_VALUES,
4
4
  isLayoutEngineKind,
5
5
  layoutEngine
6
- } from "./chunks/chunk-VK6XMP6B.js";
7
- import "./chunks/chunk-Q6FRNVDU.js";
8
- import "./chunks/chunk-LYJ4US66.js";
6
+ } from "./chunks/chunk-FLUQODT2.js";
9
7
  import "./chunks/chunk-7XHHVYG7.js";
10
- import "./chunks/chunk-JVLURPFW.js";
11
- import "./chunks/chunk-FYQWPEEY.js";
12
8
  export {
13
9
  LAYOUT_ENGINES,
14
10
  LAYOUT_ENGINE_VALUES,
@@ -4,19 +4,19 @@ import {
4
4
  LAYOUT_MODE_VALUES,
5
5
  layoutModeByValue,
6
6
  modeUsesLayoutEngine
7
- } from "./chunks/chunk-ICXMWYOA.js";
8
- import "./chunks/chunk-IM4SJUPO.js";
9
- import "./chunks/chunk-CWFNEKST.js";
7
+ } from "./chunks/chunk-4R6QNG23.js";
10
8
  import "./chunks/chunk-LOEA5IHZ.js";
9
+ import "./chunks/chunk-DK5P2YOL.js";
10
+ import "./chunks/chunk-CWFNEKST.js";
11
11
  import "./chunks/chunk-L3O7AWLI.js";
12
12
  import "./chunks/chunk-TZFWUT2C.js";
13
13
  import "./chunks/chunk-HNQPEMYE.js";
14
14
  import "./chunks/chunk-C44YRP5F.js";
15
15
  import "./chunks/chunk-RVS2QCOX.js";
16
- import "./chunks/chunk-3APK25GI.js";
17
- import "./chunks/chunk-KAN2WTG5.js";
18
- import "./chunks/chunk-REE4GUDM.js";
19
- import "./chunks/chunk-EMUUNWRU.js";
16
+ import "./chunks/chunk-C7MZJSPT.js";
17
+ import "./chunks/chunk-RIPAA7OK.js";
18
+ import "./chunks/chunk-TWRLC3KK.js";
19
+ import "./chunks/chunk-M6LK4GII.js";
20
20
  import "./chunks/chunk-RAEABQNW.js";
21
21
  import "./chunks/chunk-ES2N6V56.js";
22
22
  import "./chunks/chunk-BPLIXMH7.js";
@@ -5,7 +5,7 @@ import {
5
5
  pathOrigin,
6
6
  surveyPaths,
7
7
  trimOrigins
8
- } from "./chunks/chunk-EMUUNWRU.js";
8
+ } from "./chunks/chunk-M6LK4GII.js";
9
9
  import "./chunks/chunk-RAEABQNW.js";
10
10
  import "./chunks/chunk-BPLIXMH7.js";
11
11
  import "./chunks/chunk-FYQWPEEY.js";
@@ -9,8 +9,8 @@ import {
9
9
  pathHueAt,
10
10
  pathLegend,
11
11
  walkLabelsOf
12
- } from "./chunks/chunk-REE4GUDM.js";
13
- import "./chunks/chunk-EMUUNWRU.js";
12
+ } from "./chunks/chunk-TWRLC3KK.js";
13
+ import "./chunks/chunk-M6LK4GII.js";
14
14
  import "./chunks/chunk-RAEABQNW.js";
15
15
  import "./chunks/chunk-BPLIXMH7.js";
16
16
  import "./chunks/chunk-3ZZSX5HN.js";
package/dist/pipeline.js CHANGED
@@ -11,16 +11,16 @@ import {
11
11
  forceLayout,
12
12
  layoutExtent,
13
13
  loadGraph
14
- } from "./chunks/chunk-W4GZCVUK.js";
14
+ } from "./chunks/chunk-XTCNEKO5.js";
15
15
  import "./chunks/chunk-IGVV37VI.js";
16
16
  import "./chunks/chunk-OPPVSPEF.js";
17
+ import "./chunks/chunk-VPE4AYP7.js";
17
18
  import "./chunks/chunk-PUG7LXDF.js";
18
- import "./chunks/chunk-QXAB2FLJ.js";
19
+ import "./chunks/chunk-IW6CYVX2.js";
19
20
  import "./chunks/chunk-QYBZZI5H.js";
20
21
  import "./chunks/chunk-PSMKPSO4.js";
21
22
  import "./chunks/chunk-CDLPYR5O.js";
22
- import "./chunks/chunk-JVLURPFW.js";
23
- import "./chunks/chunk-EMUUNWRU.js";
23
+ import "./chunks/chunk-M6LK4GII.js";
24
24
  import "./chunks/chunk-RAEABQNW.js";
25
25
  import "./chunks/chunk-ES2N6V56.js";
26
26
  import "./chunks/chunk-G45YY72K.js";
@@ -4,13 +4,13 @@ import {
4
4
  rampHue,
5
5
  rampHueCss,
6
6
  rampStops
7
- } from "./chunks/chunk-DCJC32QW.js";
8
- import "./chunks/chunk-NP356MC2.js";
7
+ } from "./chunks/chunk-ZIUKZUPJ.js";
8
+ import "./chunks/chunk-SBMJNRTV.js";
9
9
  import "./chunks/chunk-G2FD7S3C.js";
10
10
  import "./chunks/chunk-WFB5TXRA.js";
11
- import "./chunks/chunk-REE4GUDM.js";
11
+ import "./chunks/chunk-TWRLC3KK.js";
12
12
  import "./chunks/chunk-PBENCR5L.js";
13
- import "./chunks/chunk-EMUUNWRU.js";
13
+ import "./chunks/chunk-M6LK4GII.js";
14
14
  import "./chunks/chunk-RAEABQNW.js";
15
15
  import "./chunks/chunk-ES2N6V56.js";
16
16
  import "./chunks/chunk-BPLIXMH7.js";
@@ -7,13 +7,13 @@ import {
7
7
  stripBlockAt,
8
8
  stripOverhang,
9
9
  stripPixels
10
- } from "./chunks/chunk-KJYSOHVN.js";
11
- import "./chunks/chunk-NP356MC2.js";
10
+ } from "./chunks/chunk-5BGP5Z64.js";
11
+ import "./chunks/chunk-SBMJNRTV.js";
12
12
  import "./chunks/chunk-G2FD7S3C.js";
13
13
  import "./chunks/chunk-WFB5TXRA.js";
14
- import "./chunks/chunk-REE4GUDM.js";
14
+ import "./chunks/chunk-TWRLC3KK.js";
15
15
  import "./chunks/chunk-PBENCR5L.js";
16
- import "./chunks/chunk-EMUUNWRU.js";
16
+ import "./chunks/chunk-M6LK4GII.js";
17
17
  import "./chunks/chunk-RAEABQNW.js";
18
18
  import "./chunks/chunk-ES2N6V56.js";
19
19
  import "./chunks/chunk-BPLIXMH7.js";
@@ -11,12 +11,12 @@ import {
11
11
  endTangent,
12
12
  getNodeColor,
13
13
  hslToRgb
14
- } from "../chunks/chunk-NP356MC2.js";
14
+ } from "../chunks/chunk-SBMJNRTV.js";
15
15
  import "../chunks/chunk-G2FD7S3C.js";
16
16
  import "../chunks/chunk-WFB5TXRA.js";
17
- import "../chunks/chunk-REE4GUDM.js";
17
+ import "../chunks/chunk-TWRLC3KK.js";
18
18
  import "../chunks/chunk-PBENCR5L.js";
19
- import "../chunks/chunk-EMUUNWRU.js";
19
+ import "../chunks/chunk-M6LK4GII.js";
20
20
  import "../chunks/chunk-RAEABQNW.js";
21
21
  import "../chunks/chunk-ES2N6V56.js";
22
22
  import "../chunks/chunk-BPLIXMH7.js";
@@ -1,11 +1,11 @@
1
1
  import {
2
2
  bundleRoutes
3
- } from "../chunks/chunk-FG762CCP.js";
4
- import "../chunks/chunk-IM4SJUPO.js";
3
+ } from "../chunks/chunk-PKFMP65V.js";
4
+ import "../chunks/chunk-DK5P2YOL.js";
5
5
  import "../chunks/chunk-CWFNEKST.js";
6
6
  import "../chunks/chunk-C44YRP5F.js";
7
- import "../chunks/chunk-REE4GUDM.js";
8
- import "../chunks/chunk-EMUUNWRU.js";
7
+ import "../chunks/chunk-TWRLC3KK.js";
8
+ import "../chunks/chunk-M6LK4GII.js";
9
9
  import "../chunks/chunk-RAEABQNW.js";
10
10
  import "../chunks/chunk-BPLIXMH7.js";
11
11
  import "../chunks/chunk-3ZZSX5HN.js";
@@ -1,12 +1,12 @@
1
1
  import {
2
2
  pathSteps
3
- } from "../chunks/chunk-IM4SJUPO.js";
3
+ } from "../chunks/chunk-DK5P2YOL.js";
4
4
  import "../chunks/chunk-CWFNEKST.js";
5
5
  import "../chunks/chunk-C44YRP5F.js";
6
- import "../chunks/chunk-REE4GUDM.js";
6
+ import "../chunks/chunk-TWRLC3KK.js";
7
7
  import {
8
8
  pathOrigin
9
- } from "../chunks/chunk-EMUUNWRU.js";
9
+ } from "../chunks/chunk-M6LK4GII.js";
10
10
  import {
11
11
  PathVisitsBuilder
12
12
  } from "../chunks/chunk-RAEABQNW.js";
@@ -8,12 +8,12 @@ import {
8
8
  tubeMapMismatchAt,
9
9
  tubeMapPicture,
10
10
  tubeMapTrackAt
11
- } from "../chunks/chunk-EU6FBTQF.js";
12
- import "../chunks/chunk-HK5Y2YWV.js";
11
+ } from "../chunks/chunk-IUDJKOLB.js";
13
12
  import "../chunks/chunk-XXT2JCAC.js";
13
+ import "../chunks/chunk-HK5Y2YWV.js";
14
14
  import "../chunks/chunk-CWFNEKST.js";
15
15
  import "../chunks/chunk-C44YRP5F.js";
16
- import "../chunks/chunk-EMUUNWRU.js";
16
+ import "../chunks/chunk-M6LK4GII.js";
17
17
  import "../chunks/chunk-RAEABQNW.js";
18
18
  import "../chunks/chunk-BPLIXMH7.js";
19
19
  import "../chunks/chunk-FYQWPEEY.js";
@@ -1,12 +1,12 @@
1
1
  import {
2
2
  tubeMapNodeColors
3
- } from "../chunks/chunk-OEPCRURR.js";
4
- import "../chunks/chunk-NP356MC2.js";
3
+ } from "../chunks/chunk-GNTTI6LA.js";
4
+ import "../chunks/chunk-SBMJNRTV.js";
5
5
  import "../chunks/chunk-G2FD7S3C.js";
6
6
  import "../chunks/chunk-WFB5TXRA.js";
7
- import "../chunks/chunk-REE4GUDM.js";
7
+ import "../chunks/chunk-TWRLC3KK.js";
8
8
  import "../chunks/chunk-PBENCR5L.js";
9
- import "../chunks/chunk-EMUUNWRU.js";
9
+ import "../chunks/chunk-M6LK4GII.js";
10
10
  import "../chunks/chunk-RAEABQNW.js";
11
11
  import "../chunks/chunk-ES2N6V56.js";
12
12
  import "../chunks/chunk-BPLIXMH7.js";
@@ -18,7 +18,7 @@ export { BUBBLE_SPREADS } from './bubbleSpreads.js';
18
18
  export { LAYOUT_QUALITIES } from './layoutQualities.js';
19
19
  export type { LayoutQuality } from './layoutQualities.js';
20
20
  export type { BubbleSpread } from './bubbleSpreads.js';
21
- export { stressLayout } from './layout/stressEngine.js';
21
+ export { stressLayout } from '@jbrowse/graph-stress-layout';
22
22
  export { LAYOUT_ENGINES, layoutEngine } from './layoutEngines.js';
23
23
  export type { LayoutEngineKind } from './layoutEngines.js';
24
24
  export { REFERENCE_RAMP_MAX_HUE, buildGeometry, computeReferenceRamp, } from './renderer/GeometryBuilder.js';
@@ -1,7 +1,6 @@
1
1
  import type { BandageScaleOpts } from './drawnScale.js';
2
2
  import type { DeletionEdge } from '../deletionEdges.js';
3
3
  import type { Graph, GraphEdge, GraphNode, NodeSegment } from '../types.js';
4
- export declare const ROUTE_ID = "\0deletion:";
5
4
  export type DeletionRoutes = Record<number, NodeSegment[]>;
6
5
  export declare function withDeletionRoutes(graph: Graph, deletions: DeletionEdge[], dropped?: Set<number>): {
7
6
  graph: {
@@ -1 +1 @@
1
- export declare const version = "10.0.0";
1
+ export declare const version = "10.1.0";
package/dist/version.js CHANGED
@@ -1,6 +1,6 @@
1
1
  import {
2
2
  version
3
- } from "./chunks/chunk-CDPYXHVR.js";
3
+ } from "./chunks/chunk-MZIOBJZB.js";
4
4
  export {
5
5
  version
6
6
  };