@jayjiang/byoao 0.4.0 → 0.6.0

package/dist/vault/glossary.js

@@ -1,31 +1,25 @@
 import fs from "fs-extra";
 import path from "node:path";
 export async function addGlossaryTerm(input) {
-    const { vaultPath, term, definition } = input;
+    const { vaultPath, term, definition, domain } = input;
     const glossaryPath = path.join(vaultPath, "Knowledge/Glossary.md");
     if (!(await fs.pathExists(glossaryPath))) {
         throw new Error(`Glossary not found at: ${glossaryPath}`);
     }
     let content = await fs.readFile(glossaryPath, "utf-8");
-    // Find the Core Terms table and append a new row
-    const newRow = `| **${term}** | ${definition} |`;
-    // Find the last row in the Core Terms table (after |------|-----------|)
-    const tableMatch = content.match(/(## Core Terms\n\n\| Term \| Definition \|\n\|------|-----------\|\n)([\s\S]*?)(\n\n---|\n\n##|\n*$)/);
+    const newRow = `| **${term}** | ${definition} | ${domain ?? ""} |`;
+    // Find the glossary table (Term | Definition | Domain)
+    const tableMatch = content.match(/(\| Term \| Definition \| Domain \|\n\|------\|-----------|--------\|\n)([\s\S]*?)(\n*$)/);
     if (tableMatch) {
-        const [fullMatch, tableHeader, existingRows, tableEnd] = tableMatch;
+        const [fullMatch, tableHeader, existingRows, trailing] = tableMatch;
         const updatedRows = existingRows.trim()
             ? `${existingRows.trim()}\n${newRow}`
             : newRow;
-        content = content.replace(fullMatch, `${tableHeader}${updatedRows}\n${tableEnd}`);
+        content = content.replace(fullMatch, `${tableHeader}${updatedRows}\n`);
     }
     else {
-        // Fallback: just append before the "How to Add" section
-        if (content.includes("## How to Add a New Term")) {
-            content = content.replace("## How to Add a New Term", `${newRow}\n\n## How to Add a New Term`);
-        }
-        else {
-            content += `\n${newRow}\n`;
-        }
+        // Fallback: append to end of file
+        content = content.trimEnd() + `\n${newRow}\n`;
     }
     await fs.writeFile(glossaryPath, content);
     return { glossaryPath, termAdded: term };

package/dist/vault/glossary.js.map

@@ -1 +1 @@
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+{"version":3,"file":"glossary.js","sourceRoot":"","sources":["../../src/vault/glossary.ts"],"names":[],"mappings":"AAAA,OAAO,EAAE,MAAM,UAAU,CAAC;AAC1B,OAAO,IAAI,MAAM,WAAW,CAAC;AAQ7B,MAAM,CAAC,KAAK,UAAU,eAAe,CACnC,KAA2B;IAE3B,MAAM,EAAE,SAAS,EAAE,IAAI,EAAE,UAAU,EAAE,MAAM,EAAE,GAAG,KAAK,CAAC;IAEtD,MAAM,YAAY,GAAG,IAAI,CAAC,IAAI,CAAC,SAAS,EAAE,uBAAuB,CAAC,CAAC;IACnE,IAAI,CAAC,CAAC,MAAM,EAAE,CAAC,UAAU,CAAC,YAAY,CAAC,CAAC,EAAE,CAAC;QACzC,MAAM,IAAI,KAAK,CAAC,0BAA0B,YAAY,EAAE,CAAC,CAAC;IAC5D,CAAC;IAED,IAAI,OAAO,GAAG,MAAM,EAAE,CAAC,QAAQ,CAAC,YAAY,EAAE,OAAO,CAAC,CAAC;IAEvD,MAAM,MAAM,GAAG,OAAO,IAAI,QAAQ,UAAU,MAAM,MAAM,IAAI,EAAE,IAAI,CAAC;IAEnE,uDAAuD;IACvD,MAAM,UAAU,GAAG,OAAO,CAAC,KAAK,CAC9B,0FAA0F,CAC3F,CAAC;IAEF,IAAI,UAAU,EAAE,CAAC;QACf,MAAM,CAAC,SAAS,EAAE,WAAW,EAAE,YAAY,EAAE,QAAQ,CAAC,GAAG,UAAU,CAAC;QACpE,MAAM,WAAW,GAAG,YAAY,CAAC,IAAI,EAAE;YACrC,CAAC,CAAC,GAAG,YAAY,CAAC,IAAI,EAAE,KAAK,MAAM,EAAE;YACrC,CAAC,CAAC,MAAM,CAAC;QACX,OAAO,GAAG,OAAO,CAAC,OAAO,CACvB,SAAS,EACT,GAAG,WAAW,GAAG,WAAW,IAAI,CACjC,CAAC;IACJ,CAAC;SAAM,CAAC;QACN,kCAAkC;QAClC,OAAO,GAAG,OAAO,CAAC,OAAO,EAAE,GAAG,KAAK,MAAM,IAAI,CAAC;IAChD,CAAC;IAED,MAAM,EAAE,CAAC,SAAS,CAAC,YAAY,EAAE,OAAO,CAAC,CAAC;IAE1C,OAAO,EAAE,YAAY,EAAE,SAAS,EAAE,IAAI,EAAE,CAAC;AAC3C,CAAC"}

package/dist/vault/manifest.js

@@ -0,0 +1,68 @@
+import fs from "fs-extra";
+import path from "node:path";
+import { z } from "zod";
+import { createRequire } from "node:module";
+const require = createRequire(import.meta.url);
+const PKG_VERSION = require("../../package.json").version;
+// ── Schema ──────────────────────────────────────────────────────
+const InfrastructureSchema = z.object({
+    skills: z.array(z.string()).default([]),
+    commands: z.array(z.string()).default([]),
+    obsidianConfig: z.array(z.string()).default([]),
+    templates: z.array(z.string()).default([]),
+});
+export const ManifestSchema = z.object({
+    version: z.string(),
+    preset: z.string(),
+    createdAt: z.string(),
+    updatedAt: z.string(),
+    infrastructure: InfrastructureSchema,
+});
+// ── Constants ───────────────────────────────────────────────────
+const MANIFEST_DIR = ".byoao";
+const MANIFEST_FILE = "manifest.json";
+// ── Functions ───────────────────────────────────────────────────
+function today() {
+    return new Date().toISOString().slice(0, 10);
+}
+function manifestPath(vaultPath) {
+    return path.join(vaultPath, MANIFEST_DIR, MANIFEST_FILE);
+}
+/** Read and validate the manifest. Returns null if missing or invalid. */
+export async function readManifest(vaultPath) {
+    const mp = manifestPath(vaultPath);
+    if (!(await fs.pathExists(mp)))
+        return null;
+    try {
+        const raw = await fs.readJson(mp);
+        return ManifestSchema.parse(raw);
+    }
+    catch {
+        /* Corrupt JSON or schema mismatch — treat as missing */
+        return null;
+    }
+}
+/** Write the manifest to .byoao/manifest.json. */
+export async function writeManifest(vaultPath, preset, installedFiles, versionOverride) {
+    const mp = manifestPath(vaultPath);
+    const existing = await readManifest(vaultPath);
+    const manifest = {
+        version: versionOverride ?? PKG_VERSION,
+        preset,
+        createdAt: existing?.createdAt ?? today(),
+        updatedAt: today(),
+        infrastructure: {
+            skills: installedFiles.skills,
+            commands: installedFiles.commands,
+            obsidianConfig: installedFiles.obsidianConfig,
+            templates: installedFiles.templates,
+        },
+    };
+    await fs.ensureDir(path.dirname(mp));
+    await fs.writeJson(mp, manifest, { spaces: 2 });
+}
+/** Exported for use by upgrade module to get package version. */
+export function getPackageVersion() {
+    return PKG_VERSION;
+}
+//# sourceMappingURL=manifest.js.map

package/dist/vault/manifest.js.map

@@ -0,0 +1 @@
+{"version":3,"file":"manifest.js","sourceRoot":"","sources":["../../src/vault/manifest.ts"],"names":[],"mappings":"AAAA,OAAO,EAAE,MAAM,UAAU,CAAC;AAC1B,OAAO,IAAI,MAAM,WAAW,CAAC;AAC7B,OAAO,EAAE,CAAC,EAAE,MAAM,KAAK,CAAC;AACxB,OAAO,EAAE,aAAa,EAAE,MAAM,aAAa,CAAC;AAE5C,MAAM,OAAO,GAAG,aAAa,CAAC,MAAM,CAAC,IAAI,CAAC,GAAG,CAAC,CAAC;AAC/C,MAAM,WAAW,GACf,OAAO,CAAC,oBAAoB,CAC7B,CAAC,OAAiB,CAAC;AAEpB,mEAAmE;AAEnE,MAAM,oBAAoB,GAAG,CAAC,CAAC,MAAM,CAAC;IACpC,MAAM,EAAE,CAAC,CAAC,KAAK,CAAC,CAAC,CAAC,MAAM,EAAE,CAAC,CAAC,OAAO,CAAC,EAAE,CAAC;IACvC,QAAQ,EAAE,CAAC,CAAC,KAAK,CAAC,CAAC,CAAC,MAAM,EAAE,CAAC,CAAC,OAAO,CAAC,EAAE,CAAC;IACzC,cAAc,EAAE,CAAC,CAAC,KAAK,CAAC,CAAC,CAAC,MAAM,EAAE,CAAC,CAAC,OAAO,CAAC,EAAE,CAAC;IAC/C,SAAS,EAAE,CAAC,CAAC,KAAK,CAAC,CAAC,CAAC,MAAM,EAAE,CAAC,CAAC,OAAO,CAAC,EAAE,CAAC;CAC3C,CAAC,CAAC;AAEH,MAAM,CAAC,MAAM,cAAc,GAAG,CAAC,CAAC,MAAM,CAAC;IACrC,OAAO,EAAE,CAAC,CAAC,MAAM,EAAE;IACnB,MAAM,EAAE,CAAC,CAAC,MAAM,EAAE;IAClB,SAAS,EAAE,CAAC,CAAC,MAAM,EAAE;IACrB,SAAS,EAAE,CAAC,CAAC,MAAM,EAAE;IACrB,cAAc,EAAE,oBAAoB;CACrC,CAAC,CAAC;AAWH,mEAAmE;AAEnE,MAAM,YAAY,GAAG,QAAQ,CAAC;AAC9B,MAAM,aAAa,GAAG,eAAe,CAAC;AAEtC,mEAAmE;AAEnE,SAAS,KAAK;IACZ,OAAO,IAAI,IAAI,EAAE,CAAC,WAAW,EAAE,CAAC,KAAK,CAAC,CAAC,EAAE,EAAE,CAAC,CAAC;AAC/C,CAAC;AAED,SAAS,YAAY,CAAC,SAAiB;IACrC,OAAO,IAAI,CAAC,IAAI,CAAC,SAAS,EAAE,YAAY,EAAE,aAAa,CAAC,CAAC;AAC3D,CAAC;AAED,0EAA0E;AAC1E,MAAM,CAAC,KAAK,UAAU,YAAY,CAAC,SAAiB;IAClD,MAAM,EAAE,GAAG,YAAY,CAAC,SAAS,CAAC,CAAC;IACnC,IAAI,CAAC,CAAC,MAAM,EAAE,CAAC,UAAU,CAAC,EAAE,CAAC,CAAC;QAAE,OAAO,IAAI,CAAC;IAE5C,IAAI,CAAC;QACH,MAAM,GAAG,GAAG,MAAM,EAAE,CAAC,QAAQ,CAAC,EAAE,CAAC,CAAC;QAClC,OAAO,cAAc,CAAC,KAAK,CAAC,GAAG,CAAC,CAAC;IACnC,CAAC;IAAC,MAAM,CAAC;QACP,wDAAwD;QACxD,OAAO,IAAI,CAAC;IACd,CAAC;AACH,CAAC;AAED,kDAAkD;AAClD,MAAM,CAAC,KAAK,UAAU,aAAa,CACjC,SAAiB,EACjB,MAAc,EACd,cAA8B,EAC9B,eAAwB;IAExB,MAAM,EAAE,GAAG,YAAY,CAAC,SAAS,CAAC,CAAC;IACnC,MAAM,QAAQ,GAAG,MAAM,YAAY,CAAC,SAAS,CAAC,CAAC;IAE/C,MAAM,QAAQ,GAAa;QACzB,OAAO,EAAE,eAAe,IAAI,WAAW;QACvC,MAAM;QACN,SAAS,EAAE,QAAQ,EAAE,SAAS,IAAI,KAAK,EAAE;QACzC,SAAS,EAAE,KAAK,EAAE;QAClB,cAAc,EAAE;YACd,MAAM,EAAE,cAAc,CAAC,MAAM;YAC7B,QAAQ,EAAE,cAAc,CAAC,QAAQ;YACjC,cAAc,EAAE,cAAc,CAAC,cAAc;YAC7C,SAAS,EAAE,cAAc,CAAC,SAAS;SACpC;KACF,CAAC;IAEF,MAAM,EAAE,CAAC,SAAS,CAAC,IAAI,CAAC,OAAO,CAAC,EAAE,CAAC,CAAC,CAAC;IACrC,MAAM,EAAE,CAAC,SAAS,CAAC,EAAE,EAAE,QAAQ,EAAE,EAAE,MAAM,EAAE,CAAC,EAAE,CAAC,CAAC;AAClD,CAAC;AAED,iEAAiE;AACjE,MAAM,UAAU,iBAAiB;IAC/B,OAAO,WAAW,CAAC;AACrB,CAAC"}

package/dist/vault/member.js

@@ -39,7 +39,7 @@ tags: [person]
         await fs.writeFile(teamIndexPath, teamContent);
     }
     // 3. Update AGENT.md wikilinks
-    for (const agentFile of ["AGENT.md", "CLAUDE.md"]) {
+    for (const agentFile of ["AGENT.md"]) {
         const agentPath = path.join(vaultPath, agentFile);
         if (await fs.pathExists(agentPath)) {
             let agentContent = await fs.readFile(agentPath, "utf-8");

package/dist/vault/member.js.map

@@ -1 +1 @@
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+{"version":3,"file":"member.js","sourceRoot":"","sources":["../../src/vault/member.ts"],"names":[],"mappings":"AAAA,OAAO,EAAE,MAAM,UAAU,CAAC;AAC1B,OAAO,IAAI,MAAM,WAAW,CAAC;AAU7B,MAAM,CAAC,KAAK,UAAU,SAAS,CAAC,KAAqB;IACnD,MAAM,EAAE,SAAS,EAAE,IAAI,EAAE,IAAI,EAAE,IAAI,EAAE,GAAG,KAAK,CAAC;IAC9C,IAAI,cAAc,GAAG,CAAC,CAAC;IAEvB,wBAAwB;IACxB,MAAM,UAAU,GAAG,IAAI,CAAC,IAAI,CAAC,SAAS,EAAE,UAAU,IAAI,KAAK,CAAC,CAAC;IAC7D,IAAI,MAAM,EAAE,CAAC,UAAU,CAAC,UAAU,CAAC,EAAE,CAAC;QACpC,MAAM,IAAI,KAAK,CAAC,+BAA+B,UAAU,EAAE,CAAC,CAAC;IAC/D,CAAC;IAED,MAAM,OAAO,GAAG;UACR,IAAI;;SAEL,IAAI;SACJ,IAAI;;;;;IAKT,IAAI;;YAEI,IAAI;YACJ,IAAI;CACf,CAAC;IACA,MAAM,EAAE,CAAC,SAAS,CAAC,UAAU,EAAE,OAAO,CAAC,CAAC;IAExC,oCAAoC;IACpC,MAAM,SAAS,GAAG,MAAM,EAAE,CAAC,OAAO,CAAC,IAAI,CAAC,IAAI,CAAC,SAAS,EAAE,QAAQ,CAAC,CAAC,CAAC;IACnE,MAAM,aAAa,GAAG,SAAS,CAAC,IAAI,CAAC,CAAC,CAAC,EAAE,EAAE,CAAC,CAAC,CAAC,QAAQ,CAAC,SAAS,CAAC,CAAC,CAAC;IAEnE,IAAI,aAAa,EAAE,CAAC;QAClB,MAAM,aAAa,GAAG,IAAI,CAAC,IAAI,CAAC,SAAS,EAAE,QAAQ,EAAE,aAAa,CAAC,CAAC;QACpE,IAAI,WAAW,GAAG,MAAM,EAAE,CAAC,QAAQ,CAAC,aAAa,EAAE,OAAO,CAAC,CAAC;QAE5D,uBAAuB;QACvB,MAAM,QAAQ,GAAG,OAAO,IAAI,QAAQ,IAAI,IAAI,CAAC;QAC7C,IAAI,WAAW,CAAC,QAAQ,CAAC,iBAAiB,CAAC,EAAE,CAAC;YAC5C,0CAA0C;YAC1C,WAAW,GAAG,WAAW,CAAC,OAAO,CAC/B,wBAAwB,EACxB,OAAO,QAAQ,EAAE,CAClB,CAAC;YACF,cAAc,EAAE,CAAC;QACnB,CAAC;QAED,MAAM,EAAE,CAAC,SAAS,CAAC,aAAa,EAAE,WAAW,CAAC,CAAC;IACjD,CAAC;IAED,+BAA+B;IAC/B,KAAK,MAAM,SAAS,IAAI,CAAC,UAAU,CAAC,EAAE,CAAC;QACrC,MAAM,SAAS,GAAG,IAAI,CAAC,IAAI,CAAC,SAAS,EAAE,SAAS,CAAC,CAAC;QAClD,IAAI,MAAM,EAAE,CAAC,UAAU,CAAC,SAAS,CAAC,EAAE,CAAC;YACnC,IAAI,YAAY,GAAG,MAAM,EAAE,CAAC,QAAQ,CAAC,SAAS,EAAE,OAAO,CAAC,CAAC;YAEzD,iCAAiC;YACjC,IAAI,YAAY,CAAC,QAAQ,CAAC,uBAAuB,CAAC,EAAE,CAAC;gBACnD,MAAM,KAAK,GAAG,yCAAyC,IAAI,QAAQ,IAAI,IAAI,CAAC;gBAC5E,YAAY,GAAG,YAAY,CAAC,OAAO,CACjC,+BAA+B,EAC/B,KAAK,CACN,CAAC;gBACF,cAAc,EAAE,CAAC;YACnB,CAAC;iBAAM,IAAI,YAAY,CAAC,QAAQ,CAAC,iBAAiB,CAAC,EAAE,CAAC;gBACpD,4CAA4C;gBAC5C,MAAM,gBAAgB,GAAG,YAAY,CAAC,KAAK,CACzC,iEAAiE,CAClE,CAAC;gBACF,IAAI,gBAAgB,EAAE,CAAC;oBACrB,MAAM,aAAa,GAAG,gBAAgB,CAAC,CAAC,CAAC,CAAC;oBAC1C,MAAM,QAAQ,GAAG,aAAa,GAAG,SAAS,IAAI,QAAQ,IAAI,IAAI,CAAC;oBAC/D,YAAY,GAAG,YAAY,CAAC,OAAO,CAAC,aAAa,EAAE,QAAQ,CAAC,CAAC;oBAC7D,cAAc,EAAE,CAAC;gBACnB,CAAC;YACH,CAAC;YAED,MAAM,EAAE,CAAC,SAAS,CAAC,SAAS,EAAE,YAAY,CAAC,CAAC;QAC9C,CAAC;IACH,CAAC;IAED,OAAO,EAAE,QAAQ,EAAE,UAAU,EAAE,cAAc,EAAE,CAAC;AAClD,CAAC"}

package/dist/vault/project.js

@@ -47,7 +47,7 @@ ${description}
         }
     }
     // 3. Update AGENT.md wikilinks
-    for (const agentFile of ["AGENT.md", "CLAUDE.md"]) {
+    for (const agentFile of ["AGENT.md"]) {
         const agentPath = path.join(vaultPath, agentFile);
         if (await fs.pathExists(agentPath)) {
             let agentContent = await fs.readFile(agentPath, "utf-8");

package/dist/vault/project.js.map

@@ -1 +1 @@
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+{"version":3,"file":"project.js","sourceRoot":"","sources":["../../src/vault/project.ts"],"names":[],"mappings":"AAAA,OAAO,EAAE,MAAM,UAAU,CAAC;AAC1B,OAAO,IAAI,MAAM,WAAW,CAAC;AAC7B,OAAO,EAAE,KAAK,EAAE,MAAM,eAAe,CAAC;AAQtC,MAAM,CAAC,KAAK,UAAU,UAAU,CAAC,KAAsB;IACrD,MAAM,EAAE,SAAS,EAAE,IAAI,EAAE,WAAW,EAAE,IAAI,EAAE,GAAG,KAAK,CAAC;IACrD,IAAI,cAAc,GAAG,CAAC,CAAC;IAEvB,yBAAyB;IACzB,MAAM,WAAW,GAAG,IAAI,CAAC,IAAI,CAAC,SAAS,EAAE,YAAY,IAAI,KAAK,CAAC,CAAC;IAChE,IAAI,MAAM,EAAE,CAAC,UAAU,CAAC,WAAW,CAAC,EAAE,CAAC;QACrC,MAAM,IAAI,KAAK,CAAC,gCAAgC,WAAW,EAAE,CAAC,CAAC;IACjE,CAAC;IAED,MAAM,OAAO,GAAG;UACR,IAAI;;;QAGN,KAAK,EAAE;SACN,IAAI;;;;;;;IAOT,IAAI;;EAEN,WAAW;CACZ,CAAC;IACA,MAAM,EAAE,CAAC,SAAS,CAAC,WAAW,EAAE,OAAO,CAAC,CAAC;IAEzC,oCAAoC;IACpC,MAAM,UAAU,GAAG,IAAI,CAAC,IAAI,CAAC,SAAS,EAAE,QAAQ,CAAC,CAAC;IAClD,IAAI,MAAM,EAAE,CAAC,UAAU,CAAC,UAAU,CAAC,EAAE,CAAC;QACpC,MAAM,SAAS,GAAG,MAAM,EAAE,CAAC,OAAO,CAAC,UAAU,CAAC,CAAC;QAC/C,MAAM,aAAa,GAAG,SAAS,CAAC,IAAI,CAAC,CAAC,CAAC,EAAE,EAAE,CAAC,CAAC,CAAC,QAAQ,CAAC,SAAS,CAAC,CAAC,CAAC;QAEnE,IAAI,aAAa,EAAE,CAAC;YAClB,MAAM,aAAa,GAAG,IAAI,CAAC,IAAI,CAAC,UAAU,EAAE,aAAa,CAAC,CAAC;YAC3D,IAAI,WAAW,GAAG,MAAM,EAAE,CAAC,QAAQ,CAAC,aAAa,EAAE,OAAO,CAAC,CAAC;YAE5D,MAAM,WAAW,GAAG,OAAO,IAAI,QAAQ,WAAW,EAAE,CAAC;YACrD,IAAI,WAAW,CAAC,QAAQ,CAAC,yBAAyB,CAAC,EAAE,CAAC;gBACpD,WAAW,GAAG,WAAW,CAAC,OAAO,CAAC,yBAAyB,EAAE,WAAW,CAAC,CAAC;YAC5E,CAAC;iBAAM,IAAI,WAAW,CAAC,QAAQ,CAAC,oBAAoB,CAAC,EAAE,CAAC;gBACtD,iCAAiC;gBACjC,WAAW,GAAG,WAAW,CAAC,OAAO,CAC/B,4CAA4C,EAC5C,SAAS,WAAW,IAAI,CACzB,CAAC;YACJ,CAAC;YACD,cAAc,EAAE,CAAC;YACjB,MAAM,EAAE,CAAC,SAAS,CAAC,aAAa,EAAE,WAAW,CAAC,CAAC;QACjD,CAAC;IACH,CAAC;IAED,+BAA+B;IAC/B,KAAK,MAAM,SAAS,IAAI,CAAC,UAAU,CAAC,EAAE,CAAC;QACrC,MAAM,SAAS,GAAG,IAAI,CAAC,IAAI,CAAC,SAAS,EAAE,SAAS,CAAC,CAAC;QAClD,IAAI,MAAM,EAAE,CAAC,UAAU,CAAC,SAAS,CAAC,EAAE,CAAC;YACnC,IAAI,YAAY,GAAG,MAAM,EAAE,CAAC,QAAQ,CAAC,SAAS,EAAE,OAAO,CAAC,CAAC;YAEzD,MAAM,WAAW,GAAG,OAAO,IAAI,QAAQ,WAAW,EAAE,CAAC;YACrD,IAAI,YAAY,CAAC,QAAQ,CAAC,wBAAwB,CAAC,EAAE,CAAC;gBACpD,YAAY,GAAG,YAAY,CAAC,OAAO,CACjC,gCAAgC,EAChC,WAAW,CACZ,CAAC;gBACF,cAAc,EAAE,CAAC;YACnB,CAAC;iBAAM,IAAI,YAAY,CAAC,QAAQ,CAAC,oBAAoB,CAAC,EAAE,CAAC;gBACvD,YAAY,GAAG,YAAY,CAAC,OAAO,CACjC,kDAAkD,EAClD,SAAS,WAAW,IAAI,CACzB,CAAC;gBACF,cAAc,EAAE,CAAC;YACnB,CAAC;YAED,MAAM,EAAE,CAAC,SAAS,CAAC,SAAS,EAAE,YAAY,CAAC,CAAC;QAC9C,CAAC;IACH,CAAC;IAED,OAAO,EAAE,QAAQ,EAAE,WAAW,EAAE,cAAc,EAAE,CAAC;AACnD,CAAC"}

package/dist/vault/upgrade.js

@@ -0,0 +1,266 @@
+import fs from "fs-extra";
+import path from "node:path";
+import { readManifest, writeManifest, getPackageVersion, } from "./manifest.js";
+import { loadPreset, getCommonDir } from "./preset.js";
+import { detectVaultContext } from "./vault-detect.js";
+// ── Constants ───────────────────────────────────────────────────
+const OBSIDIAN_CONFIG_FILES = [
+    "core-plugins.json",
+    "daily-notes.json",
+    "templates.json",
+];
+// ── Scanning ────────────────────────────────────────────────────
+/** Scan vault for installed infrastructure files. Returns relative paths. */
+export async function scanInstalledAssets(vaultPath) {
+    const skills = await scanDir(vaultPath, ".opencode/skills", ".md");
+    const commands = await scanDir(vaultPath, ".opencode/commands", ".md");
+    const templates = await scanDir(vaultPath, "Knowledge/templates", ".md");
+    const obsidianConfig = [];
+    for (const file of OBSIDIAN_CONFIG_FILES) {
+        const abs = path.join(vaultPath, ".obsidian", file);
+        if (await fs.pathExists(abs)) {
+            obsidianConfig.push(`.obsidian/${file}`);
+        }
+    }
+    return { skills, commands, obsidianConfig, templates };
+}
+async function scanDir(vaultPath, relDir, ext) {
+    const absDir = path.join(vaultPath, relDir);
+    if (!(await fs.pathExists(absDir)))
+        return [];
+    const files = await fs.readdir(absDir);
+    return files
+        .filter((f) => f.endsWith(ext))
+        .map((f) => `${relDir}/${f}`);
+}
+// ── Bootstrap ───────────────────────────────────────────────────
+const DEFAULT_PRESET = "pm-tpm";
+/** Bootstrap a manifest for vaults created before the manifest existed. */
+export async function bootstrapManifest(vaultPath, preset) {
+    const installedFiles = await scanInstalledAssets(vaultPath);
+    await writeManifest(vaultPath, preset ?? DEFAULT_PRESET, installedFiles, "0.0.0");
+    const manifest = await readManifest(vaultPath);
+    return manifest;
+}
+// ── Plan Building ───────────────────────────────────────────────
+/** Build an upgrade plan by comparing package assets against vault state. */
+export function buildUpgradePlan(vaultPath, manifest, packageAssets) {
+    const items = [];
+    const pkgVersion = getPackageVersion();
+    const categories = [
+        { key: "skills", category: "skills" },
+        { key: "commands", category: "commands" },
+        { key: "obsidianConfig", category: "obsidianConfig" },
+        { key: "templates", category: "templates" },
+    ];
+    for (const { key, category } of categories) {
+        const shipped = packageAssets[key];
+        const installed = new Set(manifest.infrastructure[key]);
+        const shippedPaths = new Set(shipped.map((s) => s.relativePath));
+        for (const entry of shipped) {
+            const onDisk = fs.existsSync(path.join(vaultPath, entry.relativePath));
+            items.push({
+                file: entry.relativePath,
+                action: onDisk ? "update" : "add",
+                category,
+            });
+        }
+        for (const installedPath of installed) {
+            if (!shippedPaths.has(installedPath)) {
+                items.push({
+                    file: installedPath,
+                    action: "deprecated",
+                    category,
+                });
+            }
+        }
+    }
+    return {
+        fromVersion: manifest.version,
+        toVersion: pkgVersion,
+        items,
+    };
+}
+// ── Asset Resolution ────────────────────────────────────────────
+function resolveAssetsDir() {
+    const srcAssets = path.resolve(import.meta.dirname, "..", "assets");
+    const distAssets = path.resolve(import.meta.dirname, "..", "..", "src", "assets");
+    if (fs.existsSync(srcAssets))
+        return srcAssets;
+    if (fs.existsSync(distAssets))
+        return distAssets;
+    return srcAssets;
+}
+function resolveSkillsDir() {
+    const srcSkills = path.resolve(import.meta.dirname, "..", "skills");
+    const distSkills = path.resolve(import.meta.dirname, "..", "..", "src", "skills");
+    if (fs.existsSync(srcSkills))
+        return srcSkills;
+    if (fs.existsSync(distSkills))
+        return distSkills;
+    return srcSkills;
+}
+/** Resolve package assets for a given preset. */
+function resolvePackageAssets(preset) {
+    const assetsDir = resolveAssetsDir();
+    const skillsDir = resolveSkillsDir();
+    const commonDir = getCommonDir();
+    const skills = [];
+    const commands = [];
+    const obsidianConfig = [];
+    const templates = [];
+    // 1. Obsidian skills → .opencode/skills/
+    const obsidianSkillsDir = path.join(assetsDir, "obsidian-skills");
+    if (fs.existsSync(obsidianSkillsDir)) {
+        for (const file of fs.readdirSync(obsidianSkillsDir)) {
+            if (file.endsWith(".md")) {
+                skills.push({
+                    relativePath: `.opencode/skills/${file}`,
+                    sourcePath: path.join(obsidianSkillsDir, file),
+                });
+            }
+        }
+    }
+    // 2. BYOAO commands (src/skills/) → .opencode/commands/
+    if (fs.existsSync(skillsDir)) {
+        for (const file of fs.readdirSync(skillsDir)) {
+            if (file.endsWith(".md")) {
+                commands.push({
+                    relativePath: `.opencode/commands/${file}`,
+                    sourcePath: path.join(skillsDir, file),
+                });
+            }
+        }
+    }
+    // 3. Obsidian config from common
+    const obsidianSrcDir = path.join(commonDir, "obsidian");
+    if (fs.existsSync(obsidianSrcDir)) {
+        for (const file of OBSIDIAN_CONFIG_FILES) {
+            const srcPath = path.join(obsidianSrcDir, file);
+            if (fs.existsSync(srcPath)) {
+                obsidianConfig.push({
+                    relativePath: `.obsidian/${file}`,
+                    sourcePath: srcPath,
+                });
+            }
+        }
+    }
+    // 4. Templates: common + preset
+    const commonTemplatesDir = path.join(commonDir, "templates");
+    if (fs.existsSync(commonTemplatesDir)) {
+        for (const file of fs.readdirSync(commonTemplatesDir)) {
+            if (file.endsWith(".md")) {
+                templates.push({
+                    relativePath: `Knowledge/templates/${file}`,
+                    sourcePath: path.join(commonTemplatesDir, file),
+                });
+            }
+        }
+    }
+    try {
+        const { presetsDir } = loadPreset(preset);
+        const presetTemplatesDir = path.join(presetsDir, preset, "templates");
+        if (fs.existsSync(presetTemplatesDir)) {
+            for (const file of fs.readdirSync(presetTemplatesDir)) {
+                if (file.endsWith(".md")) {
+                    templates.push({
+                        relativePath: `Knowledge/templates/${file}`,
+                        sourcePath: path.join(presetTemplatesDir, file),
+                    });
+                }
+            }
+        }
+    }
+    catch {
+        /* Preset not found — use common templates only */
+    }
+    return { skills, commands, obsidianConfig, templates };
+}
+// ── Upgrade Execution ───────────────────────────────────────────
+/** Upgrade a BYOAO vault's infrastructure files to the current package version. */
+export async function upgradeVault(vaultPath, options) {
+    const { preset, dryRun = false, force = false } = options ?? {};
+    // 1. Validate this is a BYOAO vault
+    const detectedPath = detectVaultContext(vaultPath);
+    if (!detectedPath) {
+        throw new Error(`No BYOAO vault detected at "${vaultPath}". ` +
+            "Expected .obsidian/ and AGENT.md or Knowledge/Glossary.md.");
+    }
+    // 2. Read or bootstrap manifest
+    let manifest = await readManifest(vaultPath);
+    if (!manifest) {
+        manifest = await bootstrapManifest(vaultPath, preset);
+    }
+    const pkgVersion = getPackageVersion();
+    const fromVersion = manifest.version;
+    // 3. Check if upgrade needed
+    if (fromVersion === pkgVersion && !force) {
+        return {
+            fromVersion,
+            toVersion: pkgVersion,
+            added: [],
+            updated: [],
+            deprecated: [],
+            errors: [],
+            dryRun,
+        };
+    }
+    // 4. Resolve package assets and build plan
+    const effectivePreset = preset ?? manifest.preset;
+    const packageAssets = resolvePackageAssets(effectivePreset);
+    const plan = buildUpgradePlan(vaultPath, manifest, packageAssets);
+    // 5. Execute plan (or dry run)
+    const added = [];
+    const updated = [];
+    const deprecated = [];
+    const errors = [];
+    if (!dryRun) {
+        // Build lookup from relativePath → sourcePath
+        const sourceMap = new Map();
+        for (const category of ["skills", "commands", "obsidianConfig", "templates"]) {
+            for (const entry of packageAssets[category]) {
+                sourceMap.set(entry.relativePath, entry.sourcePath);
+            }
+        }
+        for (const item of plan.items) {
+            try {
+                if (item.action === "add" || item.action === "update") {
+                    const source = sourceMap.get(item.file);
+                    if (source) {
+                        const dest = path.join(vaultPath, item.file);
+                        await fs.ensureDir(path.dirname(dest));
+                        await fs.copy(source, dest, { overwrite: true });
+                        if (item.action === "add") {
+                            added.push(item.file);
+                        }
+                        else {
+                            updated.push(item.file);
+                        }
+                    }
+                }
+                else if (item.action === "deprecated") {
+                    deprecated.push(item.file);
+                }
+            }
+            catch (err) {
+                errors.push({
+                    file: item.file,
+                    error: err instanceof Error ? err.message : String(err),
+                });
+            }
+        }
+        // 6. Update manifest with new version and current file list
+        const installedFiles = await scanInstalledAssets(vaultPath);
+        await writeManifest(vaultPath, effectivePreset, installedFiles);
+    }
+    return {
+        fromVersion,
+        toVersion: pkgVersion,
+        added,
+        updated,
+        deprecated,
+        errors,
+        dryRun,
+    };
+}
+//# sourceMappingURL=upgrade.js.map

package/dist/vault/upgrade.js.map

@@ -0,0 +1 @@
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package/dist/vault/vault-detect.js

@@ -26,4 +26,34 @@ export function detectVaultContext(dir) {
     }
     return null;
 }
+/**
+ * Determine the init mode for a target path:
+ * - "obsidian-vault": .obsidian/ already exists — adopt with safety
+ * - "existing": folder has .md files but no .obsidian/
+ * - "fresh": empty or non-existent directory
+ */
+export function detectInitMode(targetPath) {
+    if (!fs.existsSync(targetPath))
+        return "fresh";
+    const hasObsidian = fs.existsSync(path.join(targetPath, ".obsidian"));
+    if (hasObsidian)
+        return "obsidian-vault";
+    // Check for existing .md files (non-recursive, just top-level + one depth)
+    try {
+        const entries = fs.readdirSync(targetPath, { withFileTypes: true });
+        for (const entry of entries) {
+            if (entry.isFile() && entry.name.endsWith(".md"))
+                return "existing";
+            if (entry.isDirectory() && !entry.name.startsWith(".")) {
+                const subEntries = fs.readdirSync(path.join(targetPath, entry.name));
+                if (subEntries.some((f) => f.endsWith(".md")))
+                    return "existing";
+            }
+        }
+    }
+    catch {
+        // Can't read directory — treat as fresh
+    }
+    return "fresh";
+}
 //# sourceMappingURL=vault-detect.js.map

package/dist/vault/vault-detect.js.map

@@ -1 +1 @@
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+{"version":3,"file":"vault-detect.js","sourceRoot":"","sources":["../../src/vault/vault-detect.ts"],"names":[],"mappings":"AAAA,OAAO,EAAE,MAAM,UAAU,CAAC;AAC1B,OAAO,IAAI,MAAM,WAAW,CAAC;AAE7B;;;;;;;;;GASG;AACH,MAAM,UAAU,kBAAkB,CAAC,GAAW;IAC5C,MAAM,UAAU,GAAG,CAAC,GAAG,EAAE,IAAI,CAAC,OAAO,CAAC,GAAG,CAAC,CAAC,CAAC;IAE5C,KAAK,MAAM,SAAS,IAAI,UAAU,EAAE,CAAC;QACnC,IAAI,CAAC,EAAE,CAAC,UAAU,CAAC,SAAS,CAAC;YAAE,SAAS;QAExC,MAAM,WAAW,GAAG,EAAE,CAAC,UAAU,CAAC,IAAI,CAAC,IAAI,CAAC,SAAS,EAAE,WAAW,CAAC,CAAC,CAAC;QACrE,IAAI,CAAC,WAAW;YAAE,SAAS;QAE3B,MAAM,UAAU,GAAG,EAAE,CAAC,UAAU,CAAC,IAAI,CAAC,IAAI,CAAC,SAAS,EAAE,UAAU,CAAC,CAAC,CAAC;QACnE,MAAM,WAAW,GAAG,EAAE,CAAC,UAAU,CAC/B,IAAI,CAAC,IAAI,CAAC,SAAS,EAAE,WAAW,EAAE,aAAa,CAAC,CACjD,CAAC;QAEF,IAAI,UAAU,IAAI,WAAW,EAAE,CAAC;YAC9B,OAAO,SAAS,CAAC;QACnB,CAAC;IACH,CAAC;IAED,OAAO,IAAI,CAAC;AACd,CAAC;AAID;;;;;GAKG;AACH,MAAM,UAAU,cAAc,CAAC,UAAkB;IAC/C,IAAI,CAAC,EAAE,CAAC,UAAU,CAAC,UAAU,CAAC;QAAE,OAAO,OAAO,CAAC;IAE/C,MAAM,WAAW,GAAG,EAAE,CAAC,UAAU,CAAC,IAAI,CAAC,IAAI,CAAC,UAAU,EAAE,WAAW,CAAC,CAAC,CAAC;IACtE,IAAI,WAAW;QAAE,OAAO,gBAAgB,CAAC;IAEzC,2EAA2E;IAC3E,IAAI,CAAC;QACH,MAAM,OAAO,GAAG,EAAE,CAAC,WAAW,CAAC,UAAU,EAAE,EAAE,aAAa,EAAE,IAAI,EAAE,CAAC,CAAC;QACpE,KAAK,MAAM,KAAK,IAAI,OAAO,EAAE,CAAC;YAC5B,IAAI,KAAK,CAAC,MAAM,EAAE,IAAI,KAAK,CAAC,IAAI,CAAC,QAAQ,CAAC,KAAK,CAAC;gBAAE,OAAO,UAAU,CAAC;YACpE,IAAI,KAAK,CAAC,WAAW,EAAE,IAAI,CAAC,KAAK,CAAC,IAAI,CAAC,UAAU,CAAC,GAAG,CAAC,EAAE,CAAC;gBACvD,MAAM,UAAU,GAAG,EAAE,CAAC,WAAW,CAAC,IAAI,CAAC,IAAI,CAAC,UAAU,EAAE,KAAK,CAAC,IAAI,CAAC,CAAC,CAAC;gBACrE,IAAI,UAAU,CAAC,IAAI,CAAC,CAAC,CAAC,EAAE,EAAE,CAAC,CAAC,CAAC,QAAQ,CAAC,KAAK,CAAC,CAAC;oBAAE,OAAO,UAAU,CAAC;YACnE,CAAC;QACH,CAAC;IACH,CAAC;IAAC,MAAM,CAAC;QACP,wCAAwC;IAC1C,CAAC;IAED,OAAO,OAAO,CAAC;AACjB,CAAC"}

package/package.json

@@ -1,6 +1,6 @@
 {
   "name": "@jayjiang/byoao",
-  "version": "0.4.0",
+  "version": "0.6.0",
   "description": "Build Your Own AI OS — Obsidian + AI Agent",
   "type": "module",
   "engines": {
@@ -50,12 +50,14 @@
     "gray-matter": "^4.0.0",
     "handlebars": "^4.7.0",
     "inquirer": "^9.0.0",
+    "semver": "^7.7.4",
     "zod": "^3.23.0"
   },
   "devDependencies": {
     "@types/fs-extra": "^11.0.0",
     "@types/inquirer": "^9.0.0",
     "@types/node": "^20.0.0",
+    "@types/semver": "^7.7.1",
     "tsx": "^4.21.0",
     "typescript": "^5.4.0",
     "vitest": "^4.1.0"

package/src/assets/presets/common/AGENT.md.hbs

@@ -1,80 +1,47 @@
-# {{TEAM_NAME}} Workspace
+# {{KB_NAME}}
 
-{{{AGENT_DESCRIPTION}}}
+{{#if OWNER_NAME}}This is {{OWNER_NAME}}'s personal knowledge base.{{else}}A personal knowledge base.{{/if}} It contains interconnected notes on work, ideas, projects, people, and domains of interest.
 
-## Navigation
+## How to Navigate
 
-- Search by frontmatter: `type`, `status`, `team`, `tags`
-- Follow `[[wikilinks]]` to traverse knowledge graph
-- `Knowledge/` for domain reference
-- `People/` for team roster
+1. **Start with [[Glossary]]** — the entity dictionary for this knowledge base.
+   Every term is a key concept the owner cares about. Scan it first to
+   understand domain vocabulary.
+2. **Use frontmatter** to find relevant notes: `domain`, `type`, `tags`,
+   and `references` fields narrow down context quickly.
+3. **Follow wikilinks** — `[[links]]` connect related notes. Follow them
+   to build understanding of a topic.
+4. **Check backlinks** — discover related notes the user didn't mention.
+5. **Chain**: Glossary → domain notes → references → backlinks → details.
 
-## Domain Knowledge
+## Frontmatter Fields
 
-- [[Glossary]] — centralized term reference (start here for any domain question)
-
-### Concept Notes (Knowledge/concepts/)
-
-Complex domain concepts with rich wikilinks. Created as terms graduate from the Glossary.
+| Field        | Purpose                                          |
+|-------------|--------------------------------------------------|
+| `domain`    | Knowledge area (e.g. analytics, infrastructure)  |
+| `type`      | Note kind (meeting, idea, reference, daily, etc) |
+| `references`| Related notes — follow for deeper context        |
+| `tags`      | Flexible categorization                          |
+| `status`    | draft / active / completed / archived            |
 
 {{{ROLE_SECTION}}}
 
-## Team (People/)
-
-{{{TEAM_TABLE}}}
-
-## Templates (Knowledge/templates/)
-
-Use Obsidian's template plugin (Ctrl/Cmd+T) to insert:
-{{{TEMPLATE_LIST}}}
-
-## Document Conventions
-
-Rules for creating and modifying notes in this vault.
-
-### Required Frontmatter
-
-Every note must include:
-
-```yaml
----
-title: ""
-type: ""        # see Note Types below
-status: ""      # draft | active | completed | archived
-date: YYYY-MM-DD
-tags: []
----
-```
-
-### Note Types & Directory Mapping
-
-| type | Directory | Additional Required Fields |
-|------|-----------|---------------------------|
-| `feature` | `Projects/` | `project`, `jira`, `stakeholders`, `priority` |
-| `sprint-handoff` | `Sprints/` | `sprint`, `sprint-dates`, `jira-board` |
-| `meeting` | Caller's choice | `participants`, `meeting-type` |
-| `investigation` | Associated project folder | `jira`, `hypothesis` |
-| `decision` | Associated project folder | `decision`, `decided-by` |
-| `daily` | `Daily/` | — |
-| `reference` | `Knowledge/` | — |
-| `person` | `People/` | `team`, `role` |
-
-### File Creation Rules
+<!-- byoao:domains:start -->
+## Key Domains
 
-- Use `obsidian create template=<TemplateName>` when a matching template exists
-- If no template matches, manually construct frontmatter per the Required Frontmatter spec
-- File naming: Title Case or kebab-case{{#if HAS_JIRA}}, JIRA tickets use `{{JIRA_PROJECT}}-XXXX-Description.md`{{/if}}
-- Place files in the directory matching their `type` (see table above)
+(Auto-generated by /weave — run it to discover domains across vault notes)
 
-### Wikilink Rules
+<!-- byoao:domains:end -->
 
-- People → `[[Person Name]]`
-- Projects → `[[Project Name]]`
-- Domain terms → check `[[Glossary]]` before defining inline
-- Teams → link to the team index note in `People/`
+<!-- byoao:conventions:start -->
+## Conventions
 
-### Non-Compliant Documents
+- Notes may or may not have frontmatter. Use /weave to enrich.
+- Wikilinks are the primary connection mechanism.
+- No strict directory rules — notes live wherever the user puts them.
+- The knowledge graph (frontmatter + wikilinks) is the source of truth,
+  not the folder structure.
+- Use `/weave` to connect new notes into the graph.
+- Use `/diagnose` to check knowledge graph health.
 
-- User-created documents may not follow these conventions
-- Use `/enrich-document` to add missing frontmatter and wikilinks
-- Use `/vault-doctor` to diagnose vault-wide compliance issues
+<!-- byoao:conventions:end -->