@jax-data-science/sci-image-visualizer 0.3.2 → 0.3.3
This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
- package/README.md +7 -7
- package/esm2022/lib/toolbar/segmentation/cellpose-segmenter.service.mjs +2 -2
- package/esm2022/lib/toolbar/segmentation/sam-model-registry.mjs +9 -9
- package/fesm2022/jax-data-science-sci-image-visualizer.mjs +9 -9
- package/fesm2022/jax-data-science-sci-image-visualizer.mjs.map +1 -1
- package/package.json +3 -3
package/README.md
CHANGED
|
@@ -241,11 +241,11 @@ once per image; the decoder runs per prompt). The registry lives in
|
|
|
241
241
|
|
|
242
242
|
| Picker id | Domain | Encoder | Runs on | HF model |
|
|
243
243
|
|---|---|---|---|---|
|
|
244
|
-
| `microsam-vit-t-lm` *(default)* | light microscopy | TinyViT, ~14 MB fp16 | WASM¹ | [
|
|
245
|
-
| `microsam-vit-b-lm` | light microscopy | ViT-B, ~172 MB fp16 | WebGPU | [
|
|
246
|
-
| `patho-sam-vit-b` | histopathology (H&E) | ViT-B, ~172 MB fp16 | WebGPU | [
|
|
247
|
-
| `patho-sam-vit-b-int8` | histopathology (H&E) | ViT-B, ~100 MB int8 | WASM | [
|
|
248
|
-
| cellpose-SAM *(automatic)* | cells (generalist) | SAM ViT + flow head | WebGPU/WASM | [
|
|
244
|
+
| `microsam-vit-t-lm` *(default)* | light microscopy | TinyViT, ~14 MB fp16 | WASM¹ | [jax-image-tools/microsam-vit-t-lm-onnx](https://huggingface.co/jax-image-tools/microsam-vit-t-lm-onnx) |
|
|
245
|
+
| `microsam-vit-b-lm` | light microscopy | ViT-B, ~172 MB fp16 | WebGPU | [jax-image-tools/microsam-vit-b-lm-onnx](https://huggingface.co/jax-image-tools/microsam-vit-b-lm-onnx) |
|
|
246
|
+
| `patho-sam-vit-b` | histopathology (H&E) | ViT-B, ~172 MB fp16 | WebGPU | [jax-image-tools/patho-sam-vit-b-onnx](https://huggingface.co/jax-image-tools/patho-sam-vit-b-onnx) |
|
|
247
|
+
| `patho-sam-vit-b-int8` | histopathology (H&E) | ViT-B, ~100 MB int8 | WASM | [jax-image-tools/patho-sam-vit-b-onnx](https://huggingface.co/jax-image-tools/patho-sam-vit-b-onnx) (`encoder.int8.onnx`) |
|
|
248
|
+
| cellpose-SAM *(automatic)* | cells (generalist) | SAM ViT + flow head | WebGPU/WASM | [jax-image-tools/cellpose-sam-onnx](https://huggingface.co/jax-image-tools/cellpose-sam-onnx) |
|
|
249
249
|
|
|
250
250
|
¹ TinyViT's fp16 attention overflows on the onnxruntime-web WebGPU EP (returns an
|
|
251
251
|
empty mask); it is numerically correct and fast on WASM, so its encoder is pinned
|
|
@@ -366,8 +366,8 @@ cellpose adapter). Configure hosted SAM model URLs once at startup:
|
|
|
366
366
|
import { setSamModelUrls } from '@jax-data-science/sci-image-visualizer';
|
|
367
367
|
|
|
368
368
|
setSamModelUrls('microsam-vit-t-lm',
|
|
369
|
-
'https://huggingface.co/
|
|
370
|
-
'https://huggingface.co/
|
|
369
|
+
'https://huggingface.co/jax-image-tools/microsam-vit-t-lm-onnx/resolve/main/encoder.fp16.onnx',
|
|
370
|
+
'https://huggingface.co/jax-image-tools/microsam-vit-t-lm-onnx/resolve/main/decoder.onnx');
|
|
371
371
|
```
|
|
372
372
|
|
|
373
373
|
`onnxruntime-web` WASM/JSEP sidecars must be served from `/assets/ort/`. See
|
|
@@ -2,7 +2,7 @@ import { Injectable } from '@angular/core';
|
|
|
2
2
|
import { getOrtWasmBase } from './ort-runtime-config';
|
|
3
3
|
import * as i0 from "@angular/core";
|
|
4
4
|
/** Hosted cellpose-SAM ONNX (CPSAM, fp16). Override via {@link setModelUrl}. */
|
|
5
|
-
const DEFAULT_MODEL_URL = 'https://huggingface.co/
|
|
5
|
+
const DEFAULT_MODEL_URL = 'https://huggingface.co/jax-image-tools/cellpose-sam-onnx/resolve/main/cpsam_fp16.onnx';
|
|
6
6
|
/**
|
|
7
7
|
* Default in-library {@link ICellSegmenter} backed by cellpose-js (WebGPU/WASM
|
|
8
8
|
* ONNX) — so the toolbar's automatic **Cellpose** tool works out of the box in
|
|
@@ -82,4 +82,4 @@ i0.ɵɵngDeclareClassMetadata({ minVersion: "12.0.0", version: "17.3.9", ngImpor
|
|
|
82
82
|
type: Injectable,
|
|
83
83
|
args: [{ providedIn: 'root' }]
|
|
84
84
|
}] });
|
|
85
|
-
//# sourceMappingURL=data:application/json;base64,
|
|
85
|
+
//# sourceMappingURL=data:application/json;base64,{"version":3,"file":"cellpose-segmenter.service.js","sourceRoot":"","sources":["../../../../../src/lib/toolbar/segmentation/cellpose-segmenter.service.ts"],"names":[],"mappings":"AAAA,OAAO,EAAE,UAAU,EAAE,MAAM,eAAe,CAAC;AAC3C,OAAO,EAAE,cAAc,EAAE,MAAM,sBAAsB,CAAC;;AAKtD,gFAAgF;AAChF,MAAM,iBAAiB,GACrB,uFAAuF,CAAC;AAE1F;;;;;;;;;;;;GAYG;AAEH,MAAM,OAAO,wBAAwB;IADrC;QAEU,aAAQ,GAAoB,IAAI,CAAC;QACjC,YAAO,GAA6B,IAAI,CAAC;QACzC,aAAQ,GAAG,iBAAiB,CAAC;KAsEtC;IApEC,+EAA+E;IAC/E,WAAW,CAAC,GAAW;QACrB,IAAI,CAAC,QAAQ,GAAG,GAAG,CAAC;IACtB,CAAC;IAED,KAAK,CAAC,YAAY,CAChB,KAAiE,EACjE,QAA8B;QAE9B,IAAI,iBAAiB,GAAG,KAAK,CAAC;QAC9B,MAAM,EAAE,GAAG,MAAM,IAAI,CAAC,QAAQ,CAC5B,CAAC,MAAM,EAAE,KAAK,EAAE,EAAE;YAChB,IAAI,KAAK;gBAAE,QAAQ,EAAE,UAAU,EAAE,CAAC,MAAM,GAAG,KAAK,CAAC,CAAC;YAClD,IAAI,MAAM,GAAG,CAAC,IAAI,CAAC,iBAAiB,EAAE,CAAC;gBACrC,iBAAiB,GAAG,IAAI,CAAC;gBACzB,QAAQ,EAAE,QAAQ,EAAE,CAAC,iCAAiC,CAAC,CAAC;YAC1D,CAAC;QACH,CAAC,EACD,CAAC,MAAM,EAAE,EAAE,CAAC,QAAQ,EAAE,QAAQ,EAAE,CAAC,MAAM,CAAC,CACzC,CAAC;QACF,QAAQ,EAAE,QAAQ,EAAE,CAAC,sBAAsB,CAAC,CAAC;QAC7C,MAAM,GAAG,GAAG,MAAM,EAAE,CAAC,OAAO,CAC1B,EAAE,IAAI,EAAE,KAAK,CAAC,IAAI,EAAE,KAAK,EAAE,KAAK,CAAC,KAAK,EAAE,MAAM,EAAE,KAAK,CAAC,MAAM,EAAE,QAAQ,EAAE,CAAC,EAAE,EAC3E;YACE,0EAA0E;YAC1E,yEAAyE;YACzE,0CAA0C;YAC1C,cAAc,EAAE,CAAC,IAAI,EAAE,KAAK,EAAE,EAAE,CAAC,QAAQ,EAAE,QAAQ,EAAE,CACnD,IAAI,GAAG,KAAK,CAAC,CAAC,CAAC,2BAA2B,IAAI,IAAI,KAAK,IAAI,CAAC,CAAC,CAAC,0BAA0B,CACzF;SACF,CACF,CAAC;QACF,OAAO,EAAE,MAAM,EAAE,GAAG,CAAC,KAAK,EAAE,KAAK,EAAE,GAAG,CAAC,KAAK,EAAE,MAAM,EAAE,GAAG,CAAC,MAAM,EAAE,KAAK,EAAE,GAAG,CAAC,KAAK,EAAE,CAAC;IACvF,CAAC;IAED;;;;;;OAMG;IACH,QAAQ,CACN,UAA2D,EAC3D,QAAmC;QAEnC,IAAI,IAAI,CAAC,QAAQ;YAAE,OAAO,OAAO,CAAC,OAAO,CAAC,IAAI,CAAC,QAAQ,CAAC,CAAC;QACzD,IAAI,CAAC,IAAI,CAAC,OAAO,EAAE,CAAC;YAClB,IAAI,CAAC,OAAO,GAAG,CAAC,KAAK,IAAI,EAAE;gBACzB,sEAAsE;gBACtE,MAAM,EAAE,QAAQ,EAAE,YAAY,EAAE,GAAG,MAAM,MAAM,CAAC,aAAa,CAAC,CAAC;gBAC/D,YAAY,CAAC,EAAE,SAAS,EAAE,cAAc,EAAE,EAAE,CAAC,CAAC;gBAC9C,MAAM,EAAE,GAAG,MAAM,QAAQ,CAAC,cAAc,CAAC,IAAI,CAAC,QAAQ,EAAE;oBACtD,OAAO,EAAE,IAAI;oBACb,UAAU,EAAE,CAAC,EAAE,MAAM,EAAE,KAAK,EAAE,EAAE,EAAE,CAAC,UAAU,EAAE,CAAC,MAAM,EAAE,KAAK,CAAC;oBAC9D,QAAQ,EAAE,CAAC,CAAC,EAAE,EAAE,CAAC,QAAQ,EAAE,CAAC,CAAC,CAAC;iBAC/B,CAAC,CAAC;gBACH,IAAI,CAAC,QAAQ,GAAG,EAAE,CAAC;gBACnB,OAAO,EAAE,CAAC;YACZ,CAAC,CAAC,EAAE,CAAC;QACP,CAAC;QACD,OAAO,IAAI,CAAC,OAAO,CAAC;IACtB,CAAC;IAED,yDAAyD;IACzD,QAAQ;QACN,OAAO,IAAI,CAAC,QAAQ,KAAK,IAAI,CAAC;IAChC,CAAC;8GAxEU,wBAAwB;kHAAxB,wBAAwB,cADX,MAAM;;2FACnB,wBAAwB;kBADpC,UAAU;mBAAC,EAAE,UAAU,EAAE,MAAM,EAAE","sourcesContent":["import { Injectable } from '@angular/core';\nimport { getOrtWasmBase } from './ort-runtime-config';\n\nimport type { ICellSegmenter, CellSegmentation, CellSegmentProgress } from '../../contracts/cell-segmenter.contract';\nimport type { Cellpose } from 'cellpose-js';\n\n/** Hosted cellpose-SAM ONNX (CPSAM, fp16). Override via {@link setModelUrl}. */\nconst DEFAULT_MODEL_URL =\n  'https://huggingface.co/jax-image-tools/cellpose-sam-onnx/resolve/main/cpsam_fp16.onnx';\n\n/**\n * Default in-library {@link ICellSegmenter} backed by cellpose-js (WebGPU/WASM\n * ONNX) — so the toolbar's automatic **Cellpose** tool works out of the box in\n * any app, with no host wiring (jit-ui#90). `cellpose-js` is a regular\n * dependency — installed automatically, like `napari-js` — but it is\n * **lazy-imported** on first use, so apps that never run Cellpose pay nothing\n * for it in the bundle. A host can still override the {@link CELL_SEGMENTER}\n * token to supply a different implementation.\n *\n * Owns a single shared {@link Cellpose} instance (one model load, one WebGPU\n * session, one worker). {@link getModel} exposes that instance so a host's\n * processing pipeline can reuse it instead of loading the ~588 MB model twice.\n */\n@Injectable({ providedIn: 'root' })\nexport class CellposeSegmenterService implements ICellSegmenter {\n  private instance: Cellpose | null = null;\n  private loading: Promise<Cellpose> | null = null;\n  private modelUrl = DEFAULT_MODEL_URL;\n\n  /** Point the segmenter at a different hosted CPSAM ONNX (before first use). */\n  setModelUrl(url: string): void {\n    this.modelUrl = url;\n  }\n\n  async segmentCells(\n    image: { data: Uint8ClampedArray; width: number; height: number },\n    progress?: CellSegmentProgress,\n  ): Promise<CellSegmentation> {\n    let announcedDownload = false;\n    const cp = await this.getModel(\n      (loaded, total) => {\n        if (total) progress?.onProgress?.(loaded / total);\n        if (loaded > 0 && !announcedDownload) {\n          announcedDownload = true;\n          progress?.onStatus?.('Downloading Cellpose-SAM model…');\n        }\n      },\n      (status) => progress?.onStatus?.(status),\n    );\n    progress?.onStatus?.('Preprocessing image…');\n    const out = await cp.segment(\n      { data: image.data, width: image.width, height: image.height, channels: 4 },\n      {\n        // cellpose-js runs inference in its worker (these fire between tiles) and\n        // averaging/dynamics on the main thread; surface both so the toast shows\n        // real progress instead of looking stuck.\n        onTileProgress: (done, total) => progress?.onStatus?.(\n          done < total ? `Running inference (tile ${done}/${total})…` : 'Computing flow dynamics…',\n        ),\n      },\n    );\n    return { labels: out.masks, width: out.width, height: out.height, count: out.count };\n  }\n\n  /**\n   * The shared Cellpose instance, lazily created on first use and reused\n   * thereafter (deduped across concurrent callers). Exposed so a host pipeline\n   * engine can run richer `segment()` options on the same instance. `onProgress`\n   * reports raw downloaded/total bytes (`total` is null when unknown); `onStatus`\n   * reports worker-init phase strings.\n   */\n  getModel(\n    onProgress?: (loaded: number, total: number | null) => void,\n    onStatus?: (status: string) => void,\n  ): Promise<Cellpose> {\n    if (this.instance) return Promise.resolve(this.instance);\n    if (!this.loading) {\n      this.loading = (async () => {\n        // Lazy: keep cellpose-js + its ORT runtime out of the initial bundle.\n        const { Cellpose, configureOrt } = await import('cellpose-js');\n        configureOrt({ wasmPaths: getOrtWasmBase() });\n        const cp = await Cellpose.fromPretrained(this.modelUrl, {\n          preload: true,\n          onProgress: ({ loaded, total }) => onProgress?.(loaded, total),\n          onStatus: (s) => onStatus?.(s),\n        });\n        this.instance = cp;\n        return cp;\n      })();\n    }\n    return this.loading;\n  }\n\n  /** Whether the shared model is already loaded (warm). */\n  isLoaded(): boolean {\n    return this.instance !== null;\n  }\n}\n"]}
|
|
@@ -18,8 +18,8 @@ export const SAM_MODELS = [
|
|
|
18
18
|
{
|
|
19
19
|
id: 'microsam-vit-t-lm',
|
|
20
20
|
label: 'micro-sam ViT-T',
|
|
21
|
-
encoderUrl: 'https://huggingface.co/
|
|
22
|
-
decoderUrl: 'https://huggingface.co/
|
|
21
|
+
encoderUrl: 'https://huggingface.co/jax-image-tools/microsam-vit-t-lm-onnx/resolve/main/encoder.fp16.onnx',
|
|
22
|
+
decoderUrl: 'https://huggingface.co/jax-image-tools/microsam-vit-t-lm-onnx/resolve/main/decoder.onnx',
|
|
23
23
|
variant: 'sam1',
|
|
24
24
|
inputSize: 1024,
|
|
25
25
|
microscopy: true,
|
|
@@ -35,8 +35,8 @@ export const SAM_MODELS = [
|
|
|
35
35
|
{
|
|
36
36
|
id: 'microsam-vit-b-lm',
|
|
37
37
|
label: 'micro-sam ViT-B',
|
|
38
|
-
encoderUrl: 'https://huggingface.co/
|
|
39
|
-
decoderUrl: 'https://huggingface.co/
|
|
38
|
+
encoderUrl: 'https://huggingface.co/jax-image-tools/microsam-vit-b-lm-onnx/resolve/main/encoder.fp16.onnx',
|
|
39
|
+
decoderUrl: 'https://huggingface.co/jax-image-tools/microsam-vit-b-lm-onnx/resolve/main/decoder.onnx',
|
|
40
40
|
variant: 'sam1',
|
|
41
41
|
inputSize: 1024,
|
|
42
42
|
microscopy: true,
|
|
@@ -44,8 +44,8 @@ export const SAM_MODELS = [
|
|
|
44
44
|
{
|
|
45
45
|
id: 'patho-sam-vit-b',
|
|
46
46
|
label: 'patho-sam ViT-B',
|
|
47
|
-
encoderUrl: 'https://huggingface.co/
|
|
48
|
-
decoderUrl: 'https://huggingface.co/
|
|
47
|
+
encoderUrl: 'https://huggingface.co/jax-image-tools/patho-sam-vit-b-onnx/resolve/main/encoder.fp16.onnx',
|
|
48
|
+
decoderUrl: 'https://huggingface.co/jax-image-tools/patho-sam-vit-b-onnx/resolve/main/decoder.onnx',
|
|
49
49
|
variant: 'sam1',
|
|
50
50
|
inputSize: 1024,
|
|
51
51
|
microscopy: true,
|
|
@@ -53,8 +53,8 @@ export const SAM_MODELS = [
|
|
|
53
53
|
{
|
|
54
54
|
id: 'patho-sam-vit-b-int8',
|
|
55
55
|
label: 'patho-sam ViT-B (int8)',
|
|
56
|
-
encoderUrl: 'https://huggingface.co/
|
|
57
|
-
decoderUrl: 'https://huggingface.co/
|
|
56
|
+
encoderUrl: 'https://huggingface.co/jax-image-tools/patho-sam-vit-b-onnx/resolve/main/encoder.int8.onnx',
|
|
57
|
+
decoderUrl: 'https://huggingface.co/jax-image-tools/patho-sam-vit-b-onnx/resolve/main/decoder.onnx',
|
|
58
58
|
variant: 'sam1',
|
|
59
59
|
inputSize: 1024,
|
|
60
60
|
microscopy: true,
|
|
@@ -105,4 +105,4 @@ export function setSamModelUrls(id, encoderUrl, decoderUrl) {
|
|
|
105
105
|
activeDefaultId = id;
|
|
106
106
|
}
|
|
107
107
|
}
|
|
108
|
-
//# sourceMappingURL=data:application/json;base64,
|
|
108
|
+
//# sourceMappingURL=data:application/json;base64,{"version":3,"file":"sam-model-registry.js","sourceRoot":"","sources":["../../../../../src/lib/toolbar/segmentation/sam-model-registry.ts"],"names":[],"mappings":"AAEA;;;;;;;;;;;;;;;GAeG;AACH,MAAM,CAAC,MAAM,UAAU,GAAkB;IACvC;QACE,EAAE,EAAE,mBAAmB;QACvB,KAAK,EAAE,iBAAiB;QACxB,UAAU,EAAE,8FAA8F;QAC1G,UAAU,EAAE,yFAAyF;QACrG,OAAO,EAAE,MAAM;QACf,SAAS,EAAE,IAAI;QACf,UAAU,EAAE,IAAI;QAChB,0EAA0E;QAC1E,wEAAwE;QACxE,iEAAiE;QACjE,gBAAgB,EAAE,CAAC,MAAM,CAAC;QAC1B,qEAAqE;QACrE,2EAA2E;QAC3E,yCAAyC;QACzC,SAAS,EAAE,IAAI;KAChB;IACD;QACE,EAAE,EAAE,mBAAmB;QACvB,KAAK,EAAE,iBAAiB;QACxB,UAAU,EAAE,8FAA8F;QAC1G,UAAU,EAAE,yFAAyF;QACrG,OAAO,EAAE,MAAM;QACf,SAAS,EAAE,IAAI;QACf,UAAU,EAAE,IAAI;KACjB;IACD;QACE,EAAE,EAAE,iBAAiB;QACrB,KAAK,EAAE,iBAAiB;QACxB,UAAU,EAAE,4FAA4F;QACxG,UAAU,EAAE,uFAAuF;QACnG,OAAO,EAAE,MAAM;QACf,SAAS,EAAE,IAAI;QACf,UAAU,EAAE,IAAI;KACjB;IACD;QACE,EAAE,EAAE,sBAAsB;QAC1B,KAAK,EAAE,wBAAwB;QAC/B,UAAU,EAAE,4FAA4F;QACxG,UAAU,EAAE,uFAAuF;QACnG,OAAO,EAAE,MAAM;QACf,SAAS,EAAE,IAAI;QACf,UAAU,EAAE,IAAI;QAChB,4EAA4E;QAC5E,4EAA4E;QAC5E,yEAAyE;QACzE,gBAAgB,EAAE,CAAC,MAAM,CAAC;KAC3B;CACF,CAAC;AAEF;iDACiD;AACjD,MAAM,CAAC,MAAM,oBAAoB,GAAG,UAAU,CAAC,CAAC,CAAC,CAAC,EAAE,CAAC;AAErD;oFACoF;AACpF,IAAI,eAAe,GAAG,oBAAoB,CAAC;AAE3C;sBACsB;AACtB,MAAM,UAAU,WAAW,CAAC,EAAW;IACrC,MAAM,MAAM,GAAG,EAAE,IAAI,eAAe,CAAC;IACrC,OAAO,UAAU,CAAC,IAAI,CAAC,CAAC,CAAC,EAAE,EAAE,CAAC,CAAC,CAAC,EAAE,KAAK,MAAM,CAAC,IAAI,UAAU,CAAC,CAAC,CAAC,CAAC;AAClE,CAAC;AAED,0EAA0E;AAC1E,MAAM,UAAU,oBAAoB;IAClC,OAAO,eAAe,CAAC;AACzB,CAAC;AAED,oEAAoE;AACpE,MAAM,UAAU,kBAAkB,CAAC,EAAU;IAC3C,IAAI,UAAU,CAAC,IAAI,CAAC,CAAC,CAAC,EAAE,EAAE,CAAC,CAAC,CAAC,EAAE,KAAK,EAAE,CAAC;QAAE,eAAe,GAAG,EAAE,CAAC;AAChE,CAAC;AAED,kFAAkF;AAClF,MAAM,UAAU,eAAe,CAAC,KAAkB;IAChD,OAAO,CAAC,CAAC,KAAK,CAAC,UAAU,IAAI,CAAC,CAAC,KAAK,CAAC,UAAU,CAAC;AAClD,CAAC;AAED;;;;GAIG;AACH,MAAM,UAAU,eAAe,CAAC,EAAU,EAAE,UAAkB,EAAE,UAAkB;IAChF,MAAM,CAAC,GAAG,UAAU,CAAC,IAAI,CAAC,CAAC,CAAC,EAAE,EAAE,CAAC,CAAC,CAAC,EAAE,KAAK,EAAE,CAAC,CAAC;IAC9C,IAAI,CAAC,EAAE,CAAC;QACN,CAAC,CAAC,UAAU,GAAG,UAAU,CAAC;QAC1B,CAAC,CAAC,UAAU,GAAG,UAAU,CAAC;QAC1B,yEAAyE;QACzE,uEAAuE;QACvE,IAAI,UAAU,IAAI,UAAU;YAAE,eAAe,GAAG,EAAE,CAAC;IACrD,CAAC;AACH,CAAC","sourcesContent":["import { SamModelDef } from '../../contracts/sam.contract';\n\n/**\n * Registry of promptable SAM models for the browser segment tool.\n *\n * micro-sam (microscopy-finetuned, promptable) and patho-sam (histopathology-\n * finetuned) are entries; SAM3 slots in here once its quantized ONNX export and\n * a `variant: 'sam3'` decoder path are published. The\n * automatic cellpose-SAM model is intentionally NOT here — it's not promptable\n * and lives in the processing-pipeline's cellpose engine as the automatic tool.\n *\n * `encoderUrl` / `decoderUrl` point at the public HF-hosted ONNX pairs by\n * default, so the segment tools work out of the box in any host (mirroring the\n * cellpose default). A host can repoint them at its own hosting (e.g. a GCS\n * bucket) at runtime via {@link setSamModelUrls}; an empty URL disables a model\n * (the session throws a clear \"not configured\" error). Export/quantization\n * tooling: the sibling `browser-onnx-tools` project; see docs/sam-segmentation-design.md.\n */\nexport const SAM_MODELS: SamModelDef[] = [\n  {\n    id: 'microsam-vit-t-lm',\n    label: 'micro-sam ViT-T',\n    encoderUrl: 'https://huggingface.co/jax-image-tools/microsam-vit-t-lm-onnx/resolve/main/encoder.fp16.onnx',\n    decoderUrl: 'https://huggingface.co/jax-image-tools/microsam-vit-t-lm-onnx/resolve/main/decoder.onnx',\n    variant: 'sam1',\n    inputSize: 1024,\n    microscopy: true,\n    // TinyViT's fp16 attention overflows on the onnxruntime-web WebGPU EP and\n    // returns an empty mask (\"No masks found\"); it's numerically correct on\n    // WASM, and the encoder is tiny (~14 MB) so WASM is plenty fast.\n    encoderProviders: ['wasm'],\n    // Small enough to run in-process on the main thread — avoids the Web\n    // Worker's spawn / second-ORT-runtime / round-trip overhead, which made it\n    // noticeably slower to load and segment.\n    inProcess: true,\n  },\n  {\n    id: 'microsam-vit-b-lm',\n    label: 'micro-sam ViT-B',\n    encoderUrl: 'https://huggingface.co/jax-image-tools/microsam-vit-b-lm-onnx/resolve/main/encoder.fp16.onnx',\n    decoderUrl: 'https://huggingface.co/jax-image-tools/microsam-vit-b-lm-onnx/resolve/main/decoder.onnx',\n    variant: 'sam1',\n    inputSize: 1024,\n    microscopy: true,\n  },\n  {\n    id: 'patho-sam-vit-b',\n    label: 'patho-sam ViT-B',\n    encoderUrl: 'https://huggingface.co/jax-image-tools/patho-sam-vit-b-onnx/resolve/main/encoder.fp16.onnx',\n    decoderUrl: 'https://huggingface.co/jax-image-tools/patho-sam-vit-b-onnx/resolve/main/decoder.onnx',\n    variant: 'sam1',\n    inputSize: 1024,\n    microscopy: true,\n  },\n  {\n    id: 'patho-sam-vit-b-int8',\n    label: 'patho-sam ViT-B (int8)',\n    encoderUrl: 'https://huggingface.co/jax-image-tools/patho-sam-vit-b-onnx/resolve/main/encoder.int8.onnx',\n    decoderUrl: 'https://huggingface.co/jax-image-tools/patho-sam-vit-b-onnx/resolve/main/decoder.onnx',\n    variant: 'sam1',\n    inputSize: 1024,\n    microscopy: true,\n    // int8 dynamic-quantized encoder (~100 MB vs ~180 MB fp16, IoU ~0.99 on the\n    // sanity test). onnxruntime-web's WebGPU EP doesn't support int8 matmul, so\n    // it runs on WASM — smaller download, slower encode than the fp16 entry.\n    encoderProviders: ['wasm'],\n  },\n];\n\n/** Initial default model id (overridden at runtime once the host configures a\n *  hosted model via {@link setSamModelUrls}). */\nexport const DEFAULT_SAM_MODEL_ID = SAM_MODELS[0].id;\n\n/** The active default — updated when the host configures a model's ONNX URLs,\n *  so the tool uses the model that's actually hosted (not just the first entry). */\nlet activeDefaultId = DEFAULT_SAM_MODEL_ID;\n\n/** Look up a model by id; falls back to the active default when id is\n *  unknown/absent. */\nexport function getSamModel(id?: string): SamModelDef {\n  const wanted = id ?? activeDefaultId;\n  return SAM_MODELS.find((m) => m.id === wanted) ?? SAM_MODELS[0];\n}\n\n/** The active default model id (what the tools/picker use when unset). */\nexport function getDefaultSamModelId(): string {\n  return activeDefaultId;\n}\n\n/** Set the active default model id (must be a registered model). */\nexport function setDefaultSamModel(id: string): void {\n  if (SAM_MODELS.some((m) => m.id === id)) activeDefaultId = id;\n}\n\n/** True when a model has both ONNX URLs configured (i.e. it can actually run). */\nexport function isSamModelReady(model: SamModelDef): boolean {\n  return !!model.encoderUrl && !!model.decoderUrl;\n}\n\n/**\n * Point a registered model at its hosted ONNX pair (HF / GCS). Called by the\n * host's composition root once hosting is decided, keeping deployment URLs out\n * of the library.\n */\nexport function setSamModelUrls(id: string, encoderUrl: string, decoderUrl: string): void {\n  const m = SAM_MODELS.find((x) => x.id === id);\n  if (m) {\n    m.encoderUrl = encoderUrl;\n    m.decoderUrl = decoderUrl;\n    // The configured (hosted) model becomes the active default, so the tools\n    // use it rather than the first registry entry (which may be unhosted).\n    if (encoderUrl && decoderUrl) activeDefaultId = id;\n  }\n}\n"]}
|
|
@@ -367,7 +367,7 @@ function getOrtWasmBase() {
|
|
|
367
367
|
}
|
|
368
368
|
|
|
369
369
|
/** Hosted cellpose-SAM ONNX (CPSAM, fp16). Override via {@link setModelUrl}. */
|
|
370
|
-
const DEFAULT_MODEL_URL = 'https://huggingface.co/
|
|
370
|
+
const DEFAULT_MODEL_URL = 'https://huggingface.co/jax-image-tools/cellpose-sam-onnx/resolve/main/cpsam_fp16.onnx';
|
|
371
371
|
/**
|
|
372
372
|
* Default in-library {@link ICellSegmenter} backed by cellpose-js (WebGPU/WASM
|
|
373
373
|
* ONNX) — so the toolbar's automatic **Cellpose** tool works out of the box in
|
|
@@ -698,8 +698,8 @@ const SAM_MODELS = [
|
|
|
698
698
|
{
|
|
699
699
|
id: 'microsam-vit-t-lm',
|
|
700
700
|
label: 'micro-sam ViT-T',
|
|
701
|
-
encoderUrl: 'https://huggingface.co/
|
|
702
|
-
decoderUrl: 'https://huggingface.co/
|
|
701
|
+
encoderUrl: 'https://huggingface.co/jax-image-tools/microsam-vit-t-lm-onnx/resolve/main/encoder.fp16.onnx',
|
|
702
|
+
decoderUrl: 'https://huggingface.co/jax-image-tools/microsam-vit-t-lm-onnx/resolve/main/decoder.onnx',
|
|
703
703
|
variant: 'sam1',
|
|
704
704
|
inputSize: 1024,
|
|
705
705
|
microscopy: true,
|
|
@@ -715,8 +715,8 @@ const SAM_MODELS = [
|
|
|
715
715
|
{
|
|
716
716
|
id: 'microsam-vit-b-lm',
|
|
717
717
|
label: 'micro-sam ViT-B',
|
|
718
|
-
encoderUrl: 'https://huggingface.co/
|
|
719
|
-
decoderUrl: 'https://huggingface.co/
|
|
718
|
+
encoderUrl: 'https://huggingface.co/jax-image-tools/microsam-vit-b-lm-onnx/resolve/main/encoder.fp16.onnx',
|
|
719
|
+
decoderUrl: 'https://huggingface.co/jax-image-tools/microsam-vit-b-lm-onnx/resolve/main/decoder.onnx',
|
|
720
720
|
variant: 'sam1',
|
|
721
721
|
inputSize: 1024,
|
|
722
722
|
microscopy: true,
|
|
@@ -724,8 +724,8 @@ const SAM_MODELS = [
|
|
|
724
724
|
{
|
|
725
725
|
id: 'patho-sam-vit-b',
|
|
726
726
|
label: 'patho-sam ViT-B',
|
|
727
|
-
encoderUrl: 'https://huggingface.co/
|
|
728
|
-
decoderUrl: 'https://huggingface.co/
|
|
727
|
+
encoderUrl: 'https://huggingface.co/jax-image-tools/patho-sam-vit-b-onnx/resolve/main/encoder.fp16.onnx',
|
|
728
|
+
decoderUrl: 'https://huggingface.co/jax-image-tools/patho-sam-vit-b-onnx/resolve/main/decoder.onnx',
|
|
729
729
|
variant: 'sam1',
|
|
730
730
|
inputSize: 1024,
|
|
731
731
|
microscopy: true,
|
|
@@ -733,8 +733,8 @@ const SAM_MODELS = [
|
|
|
733
733
|
{
|
|
734
734
|
id: 'patho-sam-vit-b-int8',
|
|
735
735
|
label: 'patho-sam ViT-B (int8)',
|
|
736
|
-
encoderUrl: 'https://huggingface.co/
|
|
737
|
-
decoderUrl: 'https://huggingface.co/
|
|
736
|
+
encoderUrl: 'https://huggingface.co/jax-image-tools/patho-sam-vit-b-onnx/resolve/main/encoder.int8.onnx',
|
|
737
|
+
decoderUrl: 'https://huggingface.co/jax-image-tools/patho-sam-vit-b-onnx/resolve/main/decoder.onnx',
|
|
738
738
|
variant: 'sam1',
|
|
739
739
|
inputSize: 1024,
|
|
740
740
|
microscopy: true,
|