@jamesaphoenix/tx-core 0.4.4 → 0.5.0

package/dist/db.d.ts

@@ -1,4 +1,5 @@
 import { Context, Effect, Layer } from "effect";
+import { Database } from "bun:sqlite";
 import { DatabaseError } from "./errors.js";
 /**
  * Result type for SQL statement run operations.
@@ -27,8 +28,6 @@ export interface SqliteDatabase {
     run(sql: string, ...params: unknown[]): SqliteRunResult;
     exec(sql: string): void;
     close(): void;
-    /** Wrap a function in a transaction. Commits on success, rolls back on throw. */
-    transaction<T>(fn: () => T): () => T;
 }
 declare const SqliteClient_base: Context.TagClass<SqliteClient, "SqliteClient", SqliteDatabase>;
 /** The SqliteClient service provides a bun:sqlite Database instance. */
@@ -37,20 +36,16 @@ export declare class SqliteClient extends SqliteClient_base {
 /**
  * Get the current schema version from a database instance.
  * Exported for use in tests and CLI commands.
- *
- * Accepts SqliteDatabase interface to work with both bun:sqlite and better-sqlite3.
  */
-export declare const getSchemaVersion: (db: SqliteDatabase) => number;
+export declare const getSchemaVersion: (db: Database) => number;
 /**
  * Apply all pending migrations to the database.
  * Uses the centralized MIGRATIONS from migration-service.ts.
  * Each migration is wrapped in BEGIN IMMEDIATE/COMMIT/ROLLBACK
  * to ensure atomicity and prevent concurrent application.
- *
- * Accepts SqliteDatabase interface to work with both bun:sqlite and better-sqlite3.
  */
-export declare const applyMigrations: (db: SqliteDatabase) => void;
-export declare const makeSqliteClient: (dbPath: string) => Effect.Effect<SqliteDatabase, DatabaseError>;
+export declare const applyMigrations: (db: Database) => void;
+export declare const makeSqliteClient: (dbPath: string) => Effect.Effect<Database, DatabaseError>;
 export declare const SqliteClientLive: (dbPath: string) => Layer.Layer<SqliteClient, DatabaseError, never>;
 export {};
 //# sourceMappingURL=db.d.ts.map

package/dist/db.d.ts.map

@@ -1 +1 @@
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+{"version":3,"file":"db.d.ts","sourceRoot":"","sources":["../src/db.ts"],"names":[],"mappings":"AAAA,OAAO,EAAE,OAAO,EAAE,MAAM,EAAE,KAAK,EAAE,MAAM,QAAQ,CAAA;AAC/C,OAAO,EAAE,QAAQ,EAAE,MAAM,YAAY,CAAA;AAIrC,OAAO,EAAE,aAAa,EAAE,MAAM,aAAa,CAAA;AAE3C;;;GAGG;AACH,MAAM,WAAW,eAAe;IAC9B,eAAe,EAAE,MAAM,GAAG,MAAM,CAAA;IAChC,OAAO,EAAE,MAAM,CAAA;CAChB;AAED;;;GAGG;AACH,MAAM,WAAW,eAAe,CAAC,OAAO,GAAG,OAAO;IAChD,GAAG,CAAC,GAAG,MAAM,EAAE,OAAO,EAAE,GAAG,eAAe,CAAA;IAC1C,GAAG,CAAC,GAAG,MAAM,EAAE,OAAO,EAAE,GAAG,OAAO,GAAG,IAAI,CAAA;IACzC,GAAG,CAAC,GAAG,MAAM,EAAE,OAAO,EAAE,GAAG,OAAO,EAAE,CAAA;CACrC;AAED;;;;GAIG;AACH,MAAM,WAAW,cAAc;IAC7B,OAAO,CAAC,CAAC,GAAG,OAAO,EAAE,GAAG,EAAE,MAAM,GAAG,eAAe,CAAC,CAAC,CAAC,CAAA;IACrD,GAAG,CAAC,GAAG,EAAE,MAAM,EAAE,GAAG,MAAM,EAAE,OAAO,EAAE,GAAG,eAAe,CAAA;IACvD,IAAI,CAAC,GAAG,EAAE,MAAM,GAAG,IAAI,CAAA;IACvB,KAAK,IAAI,IAAI,CAAA;CACd;;AAED,wEAAwE;AACxE,qBAAa,YAAa,SAAQ,iBAG/B;CAAG;AAEN;;;GAGG;AACH,eAAO,MAAM,gBAAgB,GAAI,IAAI,QAAQ,KAAG,MAO/C,CAAA;AAED;;;;;GAKG;AACH,eAAO,MAAM,eAAe,GAAI,IAAI,QAAQ,KAAG,IAiB9C,CAAA;AAED,eAAO,MAAM,gBAAgB,GAAI,QAAQ,MAAM,KAAG,MAAM,CAAC,MAAM,CAAC,QAAQ,EAAE,aAAa,CAenF,CAAA;AAEJ,eAAO,MAAM,gBAAgB,GAAI,QAAQ,MAAM,oDAO5C,CAAA"}

package/dist/db.js

@@ -1,4 +1,5 @@
 import { Context, Effect, Layer } from "effect";
+import { Database } from "bun:sqlite";
 import { mkdirSync, existsSync } from "fs";
 import { dirname } from "path";
 import { MIGRATIONS } from "./services/migration-service.js";
@@ -9,8 +10,6 @@ export class SqliteClient extends Context.Tag("SqliteClient")() {
 /**
  * Get the current schema version from a database instance.
  * Exported for use in tests and CLI commands.
- *
- * Accepts SqliteDatabase interface to work with both bun:sqlite and better-sqlite3.
  */
 export const getSchemaVersion = (db) => {
     try {
@@ -26,8 +25,6 @@ export const getSchemaVersion = (db) => {
  * Uses the centralized MIGRATIONS from migration-service.ts.
  * Each migration is wrapped in BEGIN IMMEDIATE/COMMIT/ROLLBACK
  * to ensure atomicity and prevent concurrent application.
- *
- * Accepts SqliteDatabase interface to work with both bun:sqlite and better-sqlite3.
  */
 export const applyMigrations = (db) => {
     const currentVersion = getSchemaVersion(db);
@@ -36,6 +33,8 @@ export const applyMigrations = (db) => {
             db.exec("BEGIN IMMEDIATE");
             try {
                 db.exec(migration.sql);
+                // Ensure version is recorded even if the SQL file omits the INSERT
+                db.exec(`INSERT OR IGNORE INTO schema_version (version, applied_at) VALUES (${migration.version}, datetime('now'))`);
                 db.exec("COMMIT");
             }
             catch (e) {
@@ -45,87 +44,14 @@ export const applyMigrations = (db) => {
         }
     }
 };
-/**
- * Wrap a better-sqlite3 Database as SqliteDatabase.
- * Used by makeSqliteClient when running under Vitest.
- * Inlined here to avoid circular dependency on test-utils.
- */
-// eslint-disable-next-line @typescript-eslint/no-explicit-any
-function wrapBetterSqlite3ForClient(raw) {
-    return {
-        prepare(sql) {
-            const stmt = raw.prepare(sql);
-            return {
-                run(...params) {
-                    const r = stmt.run(...params);
-                    return { lastInsertRowid: r.lastInsertRowid ?? 0, changes: r.changes ?? 0 };
-                },
-                get(...params) { return stmt.get(...params) ?? null; },
-                all(...params) { return stmt.all(...params); }
-            };
-        },
-        run(sql, ...params) {
-            const trimmed = sql.trim();
-            if (trimmed.toUpperCase().startsWith("PRAGMA")) {
-                raw.pragma(trimmed.slice(6).trim());
-                return { lastInsertRowid: 0, changes: 0 };
-            }
-            const r = raw.prepare(sql).run(...params);
-            return { lastInsertRowid: r.lastInsertRowid ?? 0, changes: r.changes ?? 0 };
-        },
-        exec(sql) { raw.exec(sql); },
-        close() { raw.close(); },
-        transaction(fn) {
-            if (typeof raw.transaction === "function") {
-                return raw.transaction(fn);
-            }
-            return () => {
-                raw.exec("BEGIN");
-                try {
-                    const r = fn();
-                    raw.exec("COMMIT");
-                    return r;
-                }
-                catch (e) {
-                    raw.exec("ROLLBACK");
-                    throw e;
-                }
-            };
-        }
-    };
-}
-export const makeSqliteClient = (dbPath) => Effect.tryPromise({
-    try: async () => {
+export const makeSqliteClient = (dbPath) => Effect.try({
+    try: () => {
         const dir = dirname(dbPath);
         if (!existsSync(dir)) {
             mkdirSync(dir, { recursive: true });
         }
-        // Detect Vitest (uses better-sqlite3) vs Bun (uses bun:sqlite)
-        // Check both VITEST env var AND that we're NOT running under Bun.
-        // Tests spawn CLI subprocesses that inherit VITEST=true but should use bun:sqlite.
-        const isVitest = typeof process !== "undefined" && process.env.VITEST === "true"
-            && typeof globalThis.Bun === "undefined";
-        // Parse and validate busy_timeout to prevent SQL injection
-        const rawTimeout = process.env.TX_DB_BUSY_TIMEOUT || "5000";
-        const busyTimeout = parseInt(rawTimeout, 10);
-        if (!Number.isFinite(busyTimeout) || busyTimeout < 0) {
-            throw new Error(`Invalid TX_DB_BUSY_TIMEOUT value: ${rawTimeout}`);
-        }
-        if (isVitest) {
-            // Vitest: use better-sqlite3 wrapped as SqliteDatabase
-            const { default: BetterDatabase } = await import("better-sqlite3");
-            const raw = new BetterDatabase(dbPath);
-            raw.pragma("journal_mode = WAL");
-            raw.pragma("foreign_keys = ON");
-            raw.pragma("busy_timeout = " + busyTimeout);
-            const db = wrapBetterSqlite3ForClient(raw);
-            applyMigrations(db);
-            return db;
-        }
-        // Bun: use bun:sqlite
-        const { Database } = await import("bun:sqlite");
         const db = new Database(dbPath);
-        db.run("PRAGMA busy_timeout = " + busyTimeout);
+        db.run("PRAGMA busy_timeout = " + (process.env.TX_DB_BUSY_TIMEOUT || "5000"));
         db.run("PRAGMA journal_mode = WAL");
         db.run("PRAGMA foreign_keys = ON");
         applyMigrations(db);

package/dist/db.js.map

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package/dist/errors.d.ts

@@ -97,6 +97,38 @@ export declare class DependencyNotFoundError extends DependencyNotFoundError_bas
 }> {
     get message(): string;
 }
+declare const EdgeNotFoundError_base: new <A extends Record<string, any> = {}>(args: import("effect/Types").Equals<A, {}> extends true ? void : { readonly [P in keyof A as P extends "_tag" ? never : P]: A[P]; }) => import("effect/Cause").YieldableError & {
+    readonly _tag: "EdgeNotFoundError";
+} & Readonly<A>;
+export declare class EdgeNotFoundError extends EdgeNotFoundError_base<{
+    readonly id: number;
+}> {
+    get message(): string;
+}
+declare const AnchorNotFoundError_base: new <A extends Record<string, any> = {}>(args: import("effect/Types").Equals<A, {}> extends true ? void : { readonly [P in keyof A as P extends "_tag" ? never : P]: A[P]; }) => import("effect/Cause").YieldableError & {
+    readonly _tag: "AnchorNotFoundError";
+} & Readonly<A>;
+export declare class AnchorNotFoundError extends AnchorNotFoundError_base<{
+    readonly id: number;
+}> {
+    get message(): string;
+}
+declare const CandidateNotFoundError_base: new <A extends Record<string, any> = {}>(args: import("effect/Types").Equals<A, {}> extends true ? void : { readonly [P in keyof A as P extends "_tag" ? never : P]: A[P]; }) => import("effect/Cause").YieldableError & {
+    readonly _tag: "CandidateNotFoundError";
+} & Readonly<A>;
+export declare class CandidateNotFoundError extends CandidateNotFoundError_base<{
+    readonly id: number;
+}> {
+    get message(): string;
+}
+declare const ExtractionUnavailableError_base: new <A extends Record<string, any> = {}>(args: import("effect/Types").Equals<A, {}> extends true ? void : { readonly [P in keyof A as P extends "_tag" ? never : P]: A[P]; }) => import("effect/Cause").YieldableError & {
+    readonly _tag: "ExtractionUnavailableError";
+} & Readonly<A>;
+export declare class ExtractionUnavailableError extends ExtractionUnavailableError_base<{
+    readonly reason: string;
+}> {
+    get message(): string;
+}
 declare const RetrievalError_base: new <A extends Record<string, any> = {}>(args: import("effect/Types").Equals<A, {}> extends true ? void : { readonly [P in keyof A as P extends "_tag" ? never : P]: A[P]; }) => import("effect/Cause").YieldableError & {
     readonly _tag: "RetrievalError";
 } & Readonly<A>;
@@ -105,11 +137,12 @@ export declare class RetrievalError extends RetrievalError_base<{
 }> {
     get message(): string;
 }
-declare const LlmUnavailableError_base: new <A extends Record<string, any> = {}>(args: import("effect/Types").Equals<A, {}> extends true ? void : { readonly [P in keyof A as P extends "_tag" ? never : P]: A[P]; }) => import("effect/Cause").YieldableError & {
-    readonly _tag: "LlmUnavailableError";
+declare const AstGrepError_base: new <A extends Record<string, any> = {}>(args: import("effect/Types").Equals<A, {}> extends true ? void : { readonly [P in keyof A as P extends "_tag" ? never : P]: A[P]; }) => import("effect/Cause").YieldableError & {
+    readonly _tag: "AstGrepError";
 } & Readonly<A>;
-export declare class LlmUnavailableError extends LlmUnavailableError_base<{
+export declare class AstGrepError extends AstGrepError_base<{
     readonly reason: string;
+    readonly cause?: unknown;
 }> {
     get message(): string;
 }
@@ -340,13 +373,11 @@ export declare class InvariantNotFoundError extends InvariantNotFoundError_base<
 }> {
     get message(): string;
 }
-declare const StaleDataError_base: new <A extends Record<string, any> = {}>(args: import("effect/Types").Equals<A, {}> extends true ? void : { readonly [P in keyof A as P extends "_tag" ? never : P]: A[P]; }) => import("effect/Cause").YieldableError & {
-    readonly _tag: "StaleDataError";
+declare const LlmUnavailableError_base: new <A extends Record<string, any> = {}>(args: import("effect/Types").Equals<A, {}> extends true ? void : { readonly [P in keyof A as P extends "_tag" ? never : P]: A[P]; }) => import("effect/Cause").YieldableError & {
+    readonly _tag: "LlmUnavailableError";
 } & Readonly<A>;
-export declare class StaleDataError extends StaleDataError_base<{
-    readonly taskId: string;
-    readonly expectedUpdatedAt: string;
-    readonly actualUpdatedAt: string;
+export declare class LlmUnavailableError extends LlmUnavailableError_base<{
+    readonly reason: string;
 }> {
     get message(): string;
 }
@@ -370,6 +401,32 @@ export declare class CycleScanError extends CycleScanError_base<{
 }> {
     get message(): string;
 }
-export type TaskError = TaskNotFoundError | ValidationError | CircularDependencyError | DatabaseError | DependencyNotFoundError | EmbeddingUnavailableError | EmbeddingDimensionMismatchError | RerankerUnavailableError | RetrievalError | RegistrationError | WorkerNotFoundError | AlreadyClaimedError | ClaimNotFoundError | ClaimIdNotFoundError | LeaseExpiredError | MaxRenewalsExceededError | OrchestratorError | RunNotFoundError | InvalidStatusError | InvalidDateError | UnexpectedRowCountError | EntityFetchError | StaleDataError | HasChildrenError | LlmUnavailableError | DaemonError | FileWatcherError | WatcherAlreadyRunningError | WatcherNotRunningError | DocNotFoundError | DocLockedError | InvalidDocYamlError | InvariantNotFoundError | AgentError | CycleScanError;
+declare const MessageNotFoundError_base: new <A extends Record<string, any> = {}>(args: import("effect/Types").Equals<A, {}> extends true ? void : { readonly [P in keyof A as P extends "_tag" ? never : P]: A[P]; }) => import("effect/Cause").YieldableError & {
+    readonly _tag: "MessageNotFoundError";
+} & Readonly<A>;
+export declare class MessageNotFoundError extends MessageNotFoundError_base<{
+    readonly id: number;
+}> {
+    get message(): string;
+}
+declare const MessageAlreadyAckedError_base: new <A extends Record<string, any> = {}>(args: import("effect/Types").Equals<A, {}> extends true ? void : { readonly [P in keyof A as P extends "_tag" ? never : P]: A[P]; }) => import("effect/Cause").YieldableError & {
+    readonly _tag: "MessageAlreadyAckedError";
+} & Readonly<A>;
+export declare class MessageAlreadyAckedError extends MessageAlreadyAckedError_base<{
+    readonly id: number;
+}> {
+    get message(): string;
+}
+declare const StaleDataError_base: new <A extends Record<string, any> = {}>(args: import("effect/Types").Equals<A, {}> extends true ? void : { readonly [P in keyof A as P extends "_tag" ? never : P]: A[P]; }) => import("effect/Cause").YieldableError & {
+    readonly _tag: "StaleDataError";
+} & Readonly<A>;
+export declare class StaleDataError extends StaleDataError_base<{
+    readonly taskId: string;
+    readonly expectedUpdatedAt: string;
+    readonly actualUpdatedAt: string;
+}> {
+    get message(): string;
+}
+export type TaskError = TaskNotFoundError | ValidationError | DocNotFoundError | DocLockedError | InvalidDocYamlError | InvariantNotFoundError | CircularDependencyError | DatabaseError | DependencyNotFoundError | EmbeddingUnavailableError | EmbeddingDimensionMismatchError | RerankerUnavailableError | ExtractionUnavailableError | RetrievalError | AstGrepError | DaemonError | FileWatcherError | WatcherAlreadyRunningError | WatcherNotRunningError | CandidateNotFoundError | RegistrationError | WorkerNotFoundError | AlreadyClaimedError | ClaimNotFoundError | ClaimIdNotFoundError | LeaseExpiredError | MaxRenewalsExceededError | OrchestratorError | RunNotFoundError | InvalidStatusError | InvalidDateError | UnexpectedRowCountError | EntityFetchError | StaleDataError | HasChildrenError | MessageNotFoundError | MessageAlreadyAckedError | LlmUnavailableError | AgentError | CycleScanError;
 export {};
 //# sourceMappingURL=errors.d.ts.map

package/dist/errors.d.ts.map

@@ -1 +1 @@
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package/dist/errors.js

@@ -59,18 +59,36 @@ export class DependencyNotFoundError extends Data.TaggedError("DependencyNotFoun
         return `Dependency not found: ${this.blockerId} -> ${this.blockedId}`;
     }
 }
+export class EdgeNotFoundError extends Data.TaggedError("EdgeNotFoundError") {
+    get message() {
+        return `Edge not found: ${this.id}`;
+    }
+}
+export class AnchorNotFoundError extends Data.TaggedError("AnchorNotFoundError") {
+    get message() {
+        return `Anchor not found: ${this.id}`;
+    }
+}
+export class CandidateNotFoundError extends Data.TaggedError("CandidateNotFoundError") {
+    get message() {
+        return `Candidate not found: ${this.id}`;
+    }
+}
+export class ExtractionUnavailableError extends Data.TaggedError("ExtractionUnavailableError") {
+    get message() {
+        return `Extraction unavailable: ${this.reason}`;
+    }
+}
 export class RetrievalError extends Data.TaggedError("RetrievalError") {
     get message() {
         return `Retrieval error: ${this.reason}`;
     }
 }
-// LLM service error types
-export class LlmUnavailableError extends Data.TaggedError("LlmUnavailableError") {
+export class AstGrepError extends Data.TaggedError("AstGrepError") {
     get message() {
-        return `LLM unavailable: ${this.reason}`;
+        return `AST grep error: ${this.reason}`;
     }
 }
-// Daemon / file-watcher error types
 export class DaemonError extends Data.TaggedError("DaemonError") {
     get message() {
         return `Daemon error [${this.code}]: ${this.reason}`;
@@ -192,7 +210,7 @@ export class HasChildrenError extends Data.TaggedError("HasChildrenError") {
         return `Cannot delete task ${this.id}: has ${this.childIds.length} child task(s) (${this.childIds.join(", ")}). Use cascade option or delete/move children first.`;
     }
 }
-// Doc error types (DD-023)
+// Doc error types (DD-023 docs-as-primitives)
 export class DocNotFoundError extends Data.TaggedError("DocNotFoundError") {
     get message() {
         return `Doc not found: ${this.name}`;
@@ -200,7 +218,7 @@ export class DocNotFoundError extends Data.TaggedError("DocNotFoundError") {
 }
 export class DocLockedError extends Data.TaggedError("DocLockedError") {
     get message() {
-        return `Doc is locked: ${this.name} v${this.version}. Create a new version or patch.`;
+        return `Doc is locked: ${this.name} v${this.version}`;
     }
 }
 export class InvalidDocYamlError extends Data.TaggedError("InvalidDocYamlError") {
@@ -213,12 +231,12 @@ export class InvariantNotFoundError extends Data.TaggedError("InvariantNotFoundE
         return `Invariant not found: ${this.id}`;
     }
 }
-export class StaleDataError extends Data.TaggedError("StaleDataError") {
+// Agent/Cycle error types (PRD-023 cycle scan)
+export class LlmUnavailableError extends Data.TaggedError("LlmUnavailableError") {
     get message() {
-        return `Stale data: task ${this.taskId} was modified externally (expected updated_at: ${this.expectedUpdatedAt}, actual: ${this.actualUpdatedAt})`;
+        return `LLM unavailable: ${this.reason}`;
     }
 }
-// Cycle scan error types
 export class AgentError extends Data.TaggedError("AgentError") {
     get message() {
         return `Agent error [${this.agent}]: ${this.reason}`;
@@ -226,7 +244,23 @@ export class AgentError extends Data.TaggedError("AgentError") {
 }
 export class CycleScanError extends Data.TaggedError("CycleScanError") {
     get message() {
-        return `Cycle scan error in ${this.phase}: ${this.reason}`;
+        return `Cycle scan error [${this.phase}]: ${this.reason}`;
+    }
+}
+// Message error types (PRD-024 agent outbox)
+export class MessageNotFoundError extends Data.TaggedError("MessageNotFoundError") {
+    get message() {
+        return `Message not found: ${this.id}`;
+    }
+}
+export class MessageAlreadyAckedError extends Data.TaggedError("MessageAlreadyAckedError") {
+    get message() {
+        return `Message already acked: ${this.id}`;
+    }
+}
+export class StaleDataError extends Data.TaggedError("StaleDataError") {
+    get message() {
+        return `Stale data: task ${this.taskId} was modified externally (expected updated_at: ${this.expectedUpdatedAt}, actual: ${this.actualUpdatedAt})`;
     }
 }
 //# sourceMappingURL=errors.js.map

package/dist/errors.js.map

@@ -1 +1 @@
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package/dist/index.d.ts

@@ -6,27 +6,32 @@
  *
  * See DD-002 for design specification.
  */
-export { TaskNotFoundError, LearningNotFoundError, FileLearningNotFoundError, AttemptNotFoundError, RunNotFoundError, ValidationError, CircularDependencyError, DatabaseError, DependencyNotFoundError, EmbeddingUnavailableError, EmbeddingDimensionMismatchError, RerankerUnavailableError, RetrievalError, LlmUnavailableError, DaemonError, FileWatcherError, WatcherAlreadyRunningError, WatcherNotRunningError, RegistrationError, WorkerNotFoundError, AlreadyClaimedError, ClaimNotFoundError, ClaimIdNotFoundError, LeaseExpiredError, MaxRenewalsExceededError, OrchestratorError, BatchProcessingError, StaleDataError, HasChildrenError, InvalidStatusError, InvalidDateError, DocNotFoundError, DocLockedError, InvalidDocYamlError, InvariantNotFoundError, AgentError, CycleScanError } from "./errors.js";
+export { TaskNotFoundError, LearningNotFoundError, FileLearningNotFoundError, AttemptNotFoundError, RunNotFoundError, ValidationError, CircularDependencyError, DatabaseError, DependencyNotFoundError, EmbeddingUnavailableError, EmbeddingDimensionMismatchError, EdgeNotFoundError, AnchorNotFoundError, CandidateNotFoundError, ExtractionUnavailableError, RerankerUnavailableError, RetrievalError, AstGrepError, DaemonError, RegistrationError, WorkerNotFoundError, AlreadyClaimedError, ClaimNotFoundError, ClaimIdNotFoundError, LeaseExpiredError, MaxRenewalsExceededError, OrchestratorError, BatchProcessingError, StaleDataError, HasChildrenError, InvalidStatusError, InvalidDateError, MessageNotFoundError, MessageAlreadyAckedError, DocNotFoundError, DocLockedError, InvalidDocYamlError, InvariantNotFoundError, AgentError, CycleScanError, LlmUnavailableError } from "./errors.js";
 export { SqliteClient, SqliteClientLive, makeSqliteClient, getSchemaVersion, applyMigrations, type SqliteDatabase, type SqliteStatement, type SqliteRunResult } from "./db.js";
 export { generateTaskId, fixtureId } from "./id.js";
-export { makeAppLayer, makeAppLayerFromInfra, makeMinimalLayer, SyncService, MigrationService, AutoSyncService, AutoSyncServiceNoop, AutoSyncServiceLive, LearningService, FileLearningService, EmbeddingService, EmbeddingServiceNoop, EmbeddingServiceLive, EmbeddingServiceOpenAI, EmbeddingServiceAuto, createEmbedderLayer, type EmbedderConfig, AttemptService, TaskService, DependencyService, ReadyService, type ReadyCheckResult, isReadyResult, HierarchyService, ScoreService, DiversifierService, DiversifierServiceNoop, DiversifierServiceLive, DiversifierServiceAuto, DocService } from "./layer.js";
-export { TaskServiceLive, DependencyServiceLive, ReadyServiceLive, HierarchyServiceLive, ScoreServiceLive, LearningServiceLive, FileLearningServiceLive, AttemptServiceLive, SyncServiceLive, MigrationServiceLive, RerankerService, RerankerServiceNoop, RerankerServiceLive, RerankerServiceAuto, RetrieverService, RetrieverServiceNoop, RetrieverServiceLive, RetrieverServiceAuto, WorkerService, WorkerServiceLive, type WorkerRegistration, type WorkerFilter, type FindDeadConfig, ClaimService, ClaimServiceLive, OrchestratorService, OrchestratorServiceLive, type OrchestratorConfig, runWorkerProcess, type WorkerProcessConfig, MIGRATIONS, getLatestVersion, type ScoreBreakdown, type ExportResult, type ImportResult, type SyncStatus, type CompactResult, type ExportOptions, type ExportAllResult, type ImportAllResult, type Migration, type AppliedMigration, type MigrationStatus, type AutoSyncEntity, type RerankerResult, isValidLlama, isValidLlamaModel, isValidLlamaEmbeddingContext, isValidOpenAIClient, validateEmbeddingDimensions, LlmService, LlmServiceNoop, LlmServiceClaudeAgentSdk, LlmServiceAnthropicSdk, LlmServiceAuto, LlmOptionsSchema, type LlmOptions, QueryExpansionService, QueryExpansionServiceNoop, QueryExpansionServiceLive, QueryExpansionServiceAuto, QueryExpansionUnavailableError, type QueryExpansionResult, MAX_EXPANSION_QUERIES, MAX_QUERY_LENGTH, validateExpansions, DeduplicationService, DeduplicationServiceLive, DaemonService, DaemonServiceLive, DaemonServiceNoop, PID_FILE_PATH, getPidFilePath, LAUNCHD_PLIST_PATH, writePid, readPid, removePid, removePidIfContentMatches, isProcessRunning, tryAtomicPidCreate, acquirePidLock, defaultDaemonConfig, generateLaunchdPlist, generateSystemdService, type DaemonStatus, type DaemonConfig, type LaunchdPlistOptions, type SystemdServiceOptions, FileWatcherService, FileWatcherServiceLive, FileWatcherServiceNoop, type FileEvent, type FileEventType, type FileWatcherConfig, type FileWatcherStatus, ClaudeCodeAdapter, GenericJSONLAdapter, getAdapter, registerAdapter, type TranscriptAdapter, type ToolCall, type Message, DocServiceLive, AgentService, AgentServiceLive, AgentServiceNoop, type AgentRunConfig, type AgentResult, CycleScanService, CycleScanServiceLive } from "./services/index.js";
-export { TaskRepository, TaskRepositoryLive, DependencyRepository, DependencyRepositoryLive, LearningRepository, LearningRepositoryLive, type BM25Result, FileLearningRepository, FileLearningRepositoryLive, AttemptRepository, AttemptRepositoryLive, RunRepository, RunRepositoryLive, WorkerRepository, WorkerRepositoryLive, ClaimRepository, ClaimRepositoryLive, OrchestratorStateRepository, OrchestratorStateRepositoryLive, type OrchestratorStateUpdate, DeduplicationRepository, DeduplicationRepositoryLive, TrackedProjectRepository, TrackedProjectRepositoryLive, DocRepository, DocRepositoryLive, type InsertDocInput, type UpdateDocInput } from "./repo/index.js";
+export { makeAppLayer, makeAppLayerFromInfra, makeMinimalLayer, SyncService, MigrationService, AutoSyncService, AutoSyncServiceNoop, AutoSyncServiceLive, LearningService, FileLearningService, EmbeddingService, EmbeddingServiceNoop, EmbeddingServiceLive, EmbeddingServiceOpenAI, EmbeddingServiceAuto, createEmbedderLayer, type EmbedderConfig, AttemptService, TaskService, DependencyService, ReadyService, type ReadyCheckResult, isReadyResult, HierarchyService, ScoreService, DeduplicationService, DeduplicationServiceLive, DiversifierService, DiversifierServiceNoop, DiversifierServiceLive, DiversifierServiceAuto, CompactionService, CompactionServiceLive, CompactionServiceNoop, CompactionServiceAuto, type CompactionOutputMode, MessageService, MessageServiceLive, type LlmCompletionRequest, type LlmCompletionResult } from "./layer.js";
+export { TaskServiceLive, DependencyServiceLive, ReadyServiceLive, HierarchyServiceLive, ScoreServiceLive, LearningServiceLive, FileLearningServiceLive, AttemptServiceLive, SyncServiceLive, MigrationServiceLive, AnchorService, AnchorServiceLive, EdgeService, EdgeServiceLive, CandidateExtractorService, CandidateExtractorServiceNoop, CandidateExtractorServiceLive, CandidateExtractorServiceAuto, LlmService, LlmServiceNoop, LlmServiceAgentSdk, LlmServiceAnthropic, LlmServiceAuto, QueryExpansionService, QueryExpansionServiceNoop, QueryExpansionServiceLive, QueryExpansionServiceAuto, MAX_EXPANSION_QUERIES, MAX_QUERY_LENGTH, validateExpansions, RerankerService, RerankerServiceNoop, RerankerServiceLive, RerankerServiceAuto, RetrieverService, RetrieverServiceNoop, RetrieverServiceLive, RetrieverServiceAuto, GraphExpansionService, GraphExpansionServiceLive, AnchorVerificationService, AnchorVerificationServiceLive, SwarmVerificationService, SwarmVerificationServiceLive, calculateMajorityVote, AstGrepService, AstGrepServiceLive, AstGrepServiceNoop, AstGrepServiceAuto, EXT_TO_LANGUAGE, DEFAULT_SYMBOL_PATTERNS, DaemonService, DaemonServiceLive, DaemonServiceNoop, PID_FILE_PATH, LAUNCHD_PLIST_PATH, SYSTEMD_SERVICE_PATH, writePid, readPid, removePid, removePidIfContentMatches, isProcessRunning, tryAtomicPidCreate, acquirePidLock, defaultDaemonConfig, generateLaunchdPlist, generateSystemdService, type DaemonStatus, type DaemonConfig, type LaunchdPlistOptions, type SystemdServiceOptions, MIGRATIONS, getLatestVersion, type ScoreBreakdown, type ExportResult, type ImportResult, type SyncStatus, type CompactResult, type ExportOptions, type ExportAllResult, type ImportAllResult, type Migration, type AppliedMigration, type MigrationStatus, type AutoSyncEntity, type AnchorVerificationResult, type BatchVerificationResult, type TypedAnchorInput, type GraphStatusResult, type PruneResult, type NeighborWithDepth, type NeighborWithPath, type FindNeighborsOptions, type QueryExpansionResult, type RerankerResult, type SeedLearning, type ExpandedLearning, type GraphExpansionOptions, type GraphExpansionResult, type FailedAnchor, type VerificationResult, type VerificationSummary, type VerifyOptions, type VerificationBatch, type BatchResult, type SwarmMetrics, type SwarmVerificationResult, type SwarmVerifyOptions, type VoteResult, PromotionService, type PromotionResult, type AutoPromoteResult, FeedbackTrackerService, FeedbackTrackerServiceNoop, FeedbackTrackerServiceLive, type LearningUsageFeedback, WorkerService, WorkerServiceLive, type WorkerRegistration, type WorkerFilter, type FindDeadConfig, ClaimService, ClaimServiceLive, OrchestratorService, OrchestratorServiceLive, type OrchestratorConfig, runWorkerProcess, type WorkerProcessConfig, DocService, DocServiceLive, AgentService, AgentServiceLive, AgentServiceNoop, type AgentRunConfig, type AgentRunResult, type AgentMessageCallback, CycleScanService, CycleScanServiceLive, isValidLlama, isValidLlamaModel, isValidLlamaEmbeddingContext, isValidOpenAIClient, validateEmbeddingDimensions } from "./services/index.js";
+export { TaskRepository, TaskRepositoryLive, DependencyRepository, DependencyRepositoryLive, LearningRepository, LearningRepositoryLive, type BM25Result, FileLearningRepository, FileLearningRepositoryLive, AttemptRepository, AttemptRepositoryLive, RunRepository, RunRepositoryLive, AnchorRepository, AnchorRepositoryLive, EdgeRepository, EdgeRepositoryLive, DeduplicationRepository, DeduplicationRepositoryLive, CandidateRepository, CandidateRepositoryLive, TrackedProjectRepository, TrackedProjectRepositoryLive, WorkerRepository, WorkerRepositoryLive, ClaimRepository, ClaimRepositoryLive, OrchestratorStateRepository, OrchestratorStateRepositoryLive, type OrchestratorStateUpdate, CompactionRepository, CompactionRepositoryLive, type CompactionLogEntry, type CreateCompactionLogInput, MessageRepository, MessageRepositoryLive, DocRepository, DocRepositoryLive } from "./repo/index.js";
 export * from "./schemas/index.js";
 export { rowToTask, rowToDependency, isValidStatus, isValidTransition, VALID_TRANSITIONS, type TaskRow, type DependencyRow } from "./mappers/task.js";
 export { rowToLearning, float32ArrayToBuffer, type LearningRow } from "./mappers/learning.js";
 export { rowToFileLearning, matchesPattern, type FileLearningRow } from "./mappers/file-learning.js";
 export { rowToAttempt, type AttemptRow } from "./mappers/attempt.js";
+export { rowToAnchor, rowToInvalidationLog, type AnchorRow, type InvalidationLogRow } from "./mappers/anchor.js";
+export { rowToEdge, type EdgeRow } from "./mappers/edge.js";
+export { normalizeContent, hashContent, rowToProcessedHash, serializeProcessedHash, rowToFileProgress, serializeFileProgress } from "./mappers/deduplication.js";
 export { rowToWorker, isValidWorkerStatus, WORKER_STATUSES, type WorkerRow } from "./mappers/worker.js";
-export { normalizeContent, hashContent } from "./mappers/deduplication.js";
-export { rowToDoc, rowToDocLink, rowToTaskDocLink, rowToInvariant, rowToInvariantCheck, isValidDocKind, isValidDocStatus, type DocRow, type DocLinkRow, type TaskDocLinkRow, type InvariantRow, type InvariantCheckRow } from "./mappers/doc.js";
+export { rowToMessage, isValidMessageStatus, type MessageRow } from "./mappers/message.js";
+export { rowToDoc, rowToDocLink, rowToTaskDocLink, rowToInvariant, rowToInvariantCheck, isValidDocKind, isValidDocStatus, isValidDocLinkType, isValidTaskDocLinkType, isValidInvariantEnforcement, isValidInvariantStatus, } from "./mappers/doc.js";
 export { cosineSimilarity } from "./utils/math.js";
+export { parseLlmJson } from "./utils/llm-json.js";
 export { matchesGlob } from "./utils/glob.js";
 export { escapeLikePattern, DEFAULT_QUERY_LIMIT } from "./utils/sql.js";
 export { computeDocHash } from "./utils/doc-hash.js";
 export { renderDocToMarkdown, renderIndexToMarkdown } from "./utils/doc-renderer.js";
-export { readTxConfig, type TxConfig, type TxDocsConfig } from "./utils/toml-config.js";
+export { readTxConfig } from "./utils/toml-config.js";
 export { type ExecutionResult, type IOCapture, type WorkerContext, type WorkerHooks, type WorkerConfig, runWorker } from "./worker/index.js";
+export { ClaudeCodeAdapter, GenericJSONLAdapter, getAdapter, registerAdapter, type TranscriptAdapter, type ToolCall, type Message } from "./services/transcript-adapter.js";
 export { TracingService, TracingServiceLive, TracingServiceNoop, type SpanOptions } from "./services/tracing-service.js";
 export { ValidationService, ValidationServiceLive, type ValidationSeverity, type ValidationIssue, type CheckResult, type ValidationResult, type ValidateOptions } from "./services/validation-service.js";
 export { buildClaudeTaskFiles, ClaudeTaskFileSchema, ClaudeSyncResultSchema, type ClaudeTaskFile, type ClaudeSyncResult } from "./sync/claude-task-writer.js";

package/dist/index.d.ts.map

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