@jamesaphoenix/tx-cli 0.4.3

package/dist/commands/graph.d.ts.map

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package/dist/commands/graph.js

@@ -0,0 +1,441 @@
+/**
+ * Graph commands: graph:verify, graph:invalidate, graph:restore, graph:prune, graph:status, graph:pin, graph:unpin,
+ * graph:link, graph:show, graph:neighbors
+ */
+import { Effect } from "effect";
+import { AnchorService, EdgeService } from "@jamesaphoenix/tx-core";
+import { toJson } from "../output.js";
+import { flag, opt, parseIntOpt } from "../utils/parse.js";
+/**
+ * tx graph:verify [--file <path>] [--all] [--json]
+ * Verify anchors for a specific file or all anchors
+ */
+export const graphVerify = (pos, flags) => Effect.gen(function* () {
+    const svc = yield* AnchorService;
+    const filePath = pos[0] ?? opt(flags, "file");
+    if (filePath) {
+        // Verify anchors for specific file
+        const result = yield* svc.verifyAnchorsForFile(filePath);
+        if (flag(flags, "json")) {
+            console.log(toJson(result));
+        }
+        else {
+            console.log(`Verification complete for: ${filePath}`);
+            console.log(`  Total: ${result.total}`);
+            console.log(`  Valid: ${result.verified}`);
+            console.log(`  Drifted: ${result.drifted}`);
+            console.log(`  Invalid: ${result.invalid}`);
+        }
+    }
+    else {
+        // Verify all anchors
+        const result = yield* svc.verifyAll();
+        if (flag(flags, "json")) {
+            console.log(toJson(result));
+        }
+        else {
+            console.log("Verification complete for all anchors");
+            console.log(`  Total: ${result.total}`);
+            console.log(`  Valid: ${result.verified}`);
+            console.log(`  Drifted: ${result.drifted}`);
+            console.log(`  Invalid: ${result.invalid}`);
+        }
+    }
+});
+/**
+ * tx graph:invalidate <anchor-id> --reason <reason> [--json]
+ * Manually invalidate an anchor
+ */
+export const graphInvalidate = (pos, flags) => Effect.gen(function* () {
+    const anchorIdStr = pos[0];
+    if (!anchorIdStr) {
+        console.error("Usage: tx graph:invalidate <anchor-id> --reason <reason> [--json]");
+        process.exit(1);
+    }
+    const anchorId = parseInt(anchorIdStr, 10);
+    if (isNaN(anchorId)) {
+        console.error("Error: Anchor ID must be a number");
+        process.exit(1);
+    }
+    const reason = opt(flags, "reason") ?? "Manual invalidation";
+    const svc = yield* AnchorService;
+    const anchor = yield* svc.invalidate(anchorId, reason);
+    if (flag(flags, "json")) {
+        console.log(toJson(anchor));
+    }
+    else {
+        console.log(`Invalidated anchor #${anchor.id}`);
+        console.log(`  Status: ${anchor.status}`);
+        console.log(`  Reason: ${reason}`);
+        console.log(`  File: ${anchor.filePath}`);
+    }
+});
+/**
+ * tx graph:restore <anchor-id> [--json]
+ * Restore a soft-deleted (invalid) anchor
+ */
+export const graphRestore = (pos, flags) => Effect.gen(function* () {
+    const anchorIdStr = pos[0];
+    if (!anchorIdStr) {
+        console.error("Usage: tx graph:restore <anchor-id> [--json]");
+        process.exit(1);
+    }
+    const anchorId = parseInt(anchorIdStr, 10);
+    if (isNaN(anchorId)) {
+        console.error("Error: Anchor ID must be a number");
+        process.exit(1);
+    }
+    const svc = yield* AnchorService;
+    const anchor = yield* svc.restore(anchorId);
+    if (flag(flags, "json")) {
+        console.log(toJson(anchor));
+    }
+    else {
+        console.log(`Restored anchor #${anchor.id}`);
+        console.log(`  Status: ${anchor.status}`);
+        console.log(`  File: ${anchor.filePath}`);
+    }
+});
+/**
+ * tx graph:prune [--older-than <days>] [--json]
+ * Hard delete old invalid anchors
+ */
+export const graphPrune = (_pos, flags) => Effect.gen(function* () {
+    const olderThanStr = opt(flags, "older-than") ?? "90";
+    // Parse days from string like "90d" or "90"
+    let olderThanDays = parseInt(olderThanStr.replace(/d$/, ""), 10);
+    if (isNaN(olderThanDays) || olderThanDays < 1) {
+        olderThanDays = 90;
+    }
+    const svc = yield* AnchorService;
+    const result = yield* svc.prune(olderThanDays);
+    if (flag(flags, "json")) {
+        console.log(toJson({ deleted: result.deleted, olderThanDays }));
+    }
+    else {
+        console.log(`Pruned invalid anchors older than ${olderThanDays} days`);
+        console.log(`  Deleted: ${result.deleted}`);
+    }
+});
+/**
+ * tx graph:status [--json]
+ * Show graph health metrics
+ */
+export const graphStatus = (_pos, flags) => Effect.gen(function* () {
+    const svc = yield* AnchorService;
+    const status = yield* svc.getStatus();
+    if (flag(flags, "json")) {
+        console.log(toJson(status));
+    }
+    else {
+        console.log("Graph Status");
+        console.log(`  Total anchors: ${status.total}`);
+        console.log(`  Valid: ${status.valid}`);
+        console.log(`  Drifted: ${status.drifted}`);
+        console.log(`  Invalid: ${status.invalid}`);
+        console.log(`  Pinned: ${status.pinned}`);
+        if (status.recentInvalidations.length > 0) {
+            console.log("\nRecent Invalidations:");
+            for (const log of status.recentInvalidations.slice(0, 5)) {
+                const date = log.invalidatedAt.toISOString().split("T")[0];
+                console.log(`  #${log.anchorId} ${log.oldStatus} → ${log.newStatus} (${log.detectedBy}) ${date}`);
+                console.log(`    Reason: ${log.reason}`);
+            }
+        }
+    }
+});
+/**
+ * tx graph:pin <anchor-id> [--json]
+ * Pin an anchor to prevent auto-invalidation
+ */
+export const graphPin = (pos, flags) => Effect.gen(function* () {
+    const anchorIdStr = pos[0];
+    if (!anchorIdStr) {
+        console.error("Usage: tx graph:pin <anchor-id> [--json]");
+        process.exit(1);
+    }
+    const anchorId = parseInt(anchorIdStr, 10);
+    if (isNaN(anchorId)) {
+        console.error("Error: Anchor ID must be a number");
+        process.exit(1);
+    }
+    const svc = yield* AnchorService;
+    const anchor = yield* svc.pin(anchorId);
+    if (flag(flags, "json")) {
+        console.log(toJson(anchor));
+    }
+    else {
+        console.log(`Pinned anchor #${anchor.id}`);
+        console.log(`  File: ${anchor.filePath}`);
+        console.log(`  Type: ${anchor.anchorType}`);
+        console.log(`  Pinned: ${anchor.pinned}`);
+    }
+});
+/**
+ * tx graph:unpin <anchor-id> [--json]
+ * Unpin an anchor to allow auto-invalidation
+ */
+export const graphUnpin = (pos, flags) => Effect.gen(function* () {
+    const anchorIdStr = pos[0];
+    if (!anchorIdStr) {
+        console.error("Usage: tx graph:unpin <anchor-id> [--json]");
+        process.exit(1);
+    }
+    const anchorId = parseInt(anchorIdStr, 10);
+    if (isNaN(anchorId)) {
+        console.error("Error: Anchor ID must be a number");
+        process.exit(1);
+    }
+    const svc = yield* AnchorService;
+    const anchor = yield* svc.unpin(anchorId);
+    if (flag(flags, "json")) {
+        console.log(toJson(anchor));
+    }
+    else {
+        console.log(`Unpinned anchor #${anchor.id}`);
+        console.log(`  File: ${anchor.filePath}`);
+        console.log(`  Type: ${anchor.anchorType}`);
+        console.log(`  Pinned: ${anchor.pinned}`);
+    }
+});
+/**
+ * tx graph:link <learning-id> <file-path> [--type glob|hash|symbol] [--value <value>] [--json]
+ * Create an anchor linking a learning to a file
+ */
+export const graphLink = (pos, flags) => Effect.gen(function* () {
+    const learningIdStr = pos[0];
+    const filePath = pos[1];
+    if (!learningIdStr || !filePath) {
+        console.error("Usage: tx graph:link <learning-id> <file-path> [--type glob|hash|symbol] [--value <value>] [--json]");
+        process.exit(1);
+    }
+    const learningId = parseInt(learningIdStr, 10);
+    if (isNaN(learningId)) {
+        console.error("Error: Learning ID must be a number");
+        process.exit(1);
+    }
+    const anchorType = (opt(flags, "type", "t") ?? "glob");
+    const validTypes = ["glob", "hash", "symbol", "line_range"];
+    if (!validTypes.includes(anchorType)) {
+        console.error(`Error: Invalid anchor type. Valid types: ${validTypes.join(", ")}`);
+        process.exit(1);
+    }
+    // Default value based on type
+    let value = opt(flags, "value", "v");
+    if (!value) {
+        switch (anchorType) {
+            case "glob":
+                value = filePath;
+                break;
+            case "hash":
+                console.error("Error: --value is required for hash anchors (SHA256 hash)");
+                process.exit(1);
+            // eslint-disable-next-line no-fallthrough
+            case "symbol":
+                console.error("Error: --value is required for symbol anchors (symbol name)");
+                process.exit(1);
+            // eslint-disable-next-line no-fallthrough
+            case "line_range":
+                console.error("Error: --value is required for line_range anchors (e.g., '10-20')");
+                process.exit(1);
+        }
+    }
+    const svc = yield* AnchorService;
+    // Build the typed anchor input
+    const input = {
+        learningId,
+        anchorType,
+        filePath,
+        value: value
+    };
+    // Handle type-specific fields
+    if (anchorType === "symbol") {
+        input.symbolFqname = opt(flags, "symbol-fqname") ?? `${filePath}::${value}`;
+    }
+    if (anchorType === "line_range") {
+        // Parse value as "start-end" or just "start"
+        const rangeParts = value.split("-");
+        if (rangeParts.length < 1 || rangeParts.length > 2 || !rangeParts[0]) {
+            console.error(`Error: Invalid line range "${value}". Expected format: start-end (e.g., 10-20) or start (e.g., 10)`);
+            process.exit(1);
+        }
+        if (rangeParts.length === 2 && !rangeParts[1]) {
+            console.error(`Error: Invalid line range "${value}". Expected format: start-end (e.g., 10-20) or start (e.g., 10)`);
+            process.exit(1);
+        }
+        input.lineStart = parseInt(rangeParts[0], 10);
+        input.lineEnd = rangeParts.length === 2 ? parseInt(rangeParts[1], 10) : input.lineStart;
+        if (isNaN(input.lineStart) || isNaN(input.lineEnd)) {
+            console.error(`Error: Invalid line range "${value}". Start and end must be numbers`);
+            process.exit(1);
+        }
+        if (input.lineStart < 1 || input.lineEnd < 1) {
+            console.error(`Error: Invalid line range "${value}". Line numbers must be positive`);
+            process.exit(1);
+        }
+        if (input.lineEnd < input.lineStart) {
+            console.error(`Error: Invalid line range "${value}". End line must be >= start line`);
+            process.exit(1);
+        }
+    }
+    if (anchorType === "hash") {
+        input.contentHash = value;
+    }
+    const anchor = yield* svc.createAnchor(input);
+    if (flag(flags, "json")) {
+        console.log(toJson(anchor));
+    }
+    else {
+        console.log(`Created anchor #${anchor.id}`);
+        console.log(`  Learning: #${anchor.learningId}`);
+        console.log(`  File: ${anchor.filePath}`);
+        console.log(`  Type: ${anchor.anchorType}`);
+        console.log(`  Value: ${anchor.anchorValue}`);
+        console.log(`  Status: ${anchor.status}`);
+    }
+});
+/**
+ * tx graph:show <learning-id> [--json]
+ * Show all edges for a learning
+ */
+export const graphShow = (pos, flags) => Effect.gen(function* () {
+    const learningIdStr = pos[0];
+    if (!learningIdStr) {
+        console.error("Usage: tx graph:show <learning-id> [--json]");
+        process.exit(1);
+    }
+    const learningId = parseInt(learningIdStr, 10);
+    if (isNaN(learningId)) {
+        console.error("Error: Learning ID must be a number");
+        process.exit(1);
+    }
+    const edgeSvc = yield* EdgeService;
+    const anchorSvc = yield* AnchorService;
+    // Get edges where learning is source
+    const outgoingEdges = yield* edgeSvc.findFromSource("learning", String(learningId));
+    // Get edges where learning is target
+    const incomingEdges = yield* edgeSvc.findToTarget("learning", String(learningId));
+    // Get anchors for this learning
+    const anchors = yield* anchorSvc.findAnchorsForLearning(learningId);
+    if (flag(flags, "json")) {
+        console.log(toJson({
+            learningId,
+            outgoingEdges,
+            incomingEdges,
+            anchors
+        }));
+    }
+    else {
+        console.log(`Graph for learning #${learningId}`);
+        if (anchors.length > 0) {
+            console.log(`\nAnchors (${anchors.length}):`);
+            for (const anchor of anchors) {
+                const pinnedInfo = anchor.pinned ? " [pinned]" : "";
+                console.log(`  #${anchor.id} ${anchor.anchorType} → ${anchor.filePath}${pinnedInfo}`);
+                console.log(`    Value: ${anchor.anchorValue}`);
+                console.log(`    Status: ${anchor.status}`);
+            }
+        }
+        else {
+            console.log("\nNo anchors");
+        }
+        if (outgoingEdges.length > 0) {
+            console.log(`\nOutgoing edges (${outgoingEdges.length}):`);
+            for (const edge of outgoingEdges) {
+                const weight = (edge.weight * 100).toFixed(0);
+                console.log(`  #${edge.id} --[${edge.edgeType}]--> ${edge.targetType}:${edge.targetId} (${weight}%)`);
+            }
+        }
+        else {
+            console.log("\nNo outgoing edges");
+        }
+        if (incomingEdges.length > 0) {
+            console.log(`\nIncoming edges (${incomingEdges.length}):`);
+            for (const edge of incomingEdges) {
+                const weight = (edge.weight * 100).toFixed(0);
+                console.log(`  #${edge.id} ${edge.sourceType}:${edge.sourceId} --[${edge.edgeType}]--> (${weight}%)`);
+            }
+        }
+        else {
+            console.log("\nNo incoming edges");
+        }
+    }
+});
+/**
+ * Parse edge types from comma-separated string.
+ */
+const parseEdgeTypes = (edgeTypesStr) => {
+    if (!edgeTypesStr)
+        return undefined;
+    return edgeTypesStr.split(",").map(s => s.trim()).filter(s => s.length > 0);
+};
+/**
+ * tx graph:neighbors <node-id> [--node-type learning|file|task|run] [--depth 2] [--edge-type IMPORTS,ANCHORED_TO] [--direction both|outgoing|incoming] [--json]
+ * Find neighbors of a node with optional multi-hop traversal
+ */
+export const graphNeighbors = (pos, flags) => Effect.gen(function* () {
+    const nodeId = pos[0];
+    if (!nodeId) {
+        console.error("Usage: tx graph:neighbors <node-id> [--node-type learning|file|task|run] [--depth 2] [--edge-type IMPORTS] [--direction both] [--json]");
+        process.exit(1);
+    }
+    const nodeType = (opt(flags, "node-type", "n") ?? "learning");
+    const validNodeTypes = ["learning", "file", "task", "run"];
+    if (!validNodeTypes.includes(nodeType)) {
+        console.error(`Error: Invalid node type. Valid types: ${validNodeTypes.join(", ")}`);
+        process.exit(1);
+    }
+    const depth = parseIntOpt(flags, "depth", "depth", "d") ?? 2;
+    if (depth < 1) {
+        console.error("Error: Depth must be a positive integer");
+        process.exit(1);
+    }
+    const edgeTypes = parseEdgeTypes(opt(flags, "edge-type", "e"));
+    const direction = (opt(flags, "direction") ?? "both");
+    const validDirections = ["outgoing", "incoming", "both"];
+    if (!validDirections.includes(direction)) {
+        console.error(`Error: Invalid direction. Valid directions: ${validDirections.join(", ")}`);
+        process.exit(1);
+    }
+    const svc = yield* EdgeService;
+    const neighbors = yield* svc.findNeighbors(nodeType, nodeId, {
+        depth,
+        direction,
+        edgeTypes
+    });
+    if (flag(flags, "json")) {
+        console.log(toJson({
+            nodeType,
+            nodeId,
+            depth,
+            direction,
+            edgeTypes: edgeTypes ?? "all",
+            neighbors
+        }));
+    }
+    else {
+        const edgeTypeInfo = edgeTypes ? ` (${edgeTypes.join(", ")})` : "";
+        console.log(`Neighbors of ${nodeType}:${nodeId} (depth ${depth}, ${direction}${edgeTypeInfo})`);
+        if (neighbors.length === 0) {
+            console.log("  No neighbors found");
+        }
+        else {
+            // Group by depth for better readability
+            const byDepth = new Map();
+            for (const n of neighbors) {
+                const existing = byDepth.get(n.depth) ?? [];
+                existing.push(n);
+                byDepth.set(n.depth, existing);
+            }
+            for (const [d, nodes] of [...byDepth.entries()].sort((a, b) => a[0] - b[0])) {
+                console.log(`\n  Depth ${d} (${nodes.length}):`);
+                for (const n of nodes) {
+                    const weight = (n.weight * 100).toFixed(0);
+                    const dirArrow = n.direction === "outgoing" ? "→" : "←";
+                    console.log(`    ${dirArrow} ${n.nodeType}:${n.nodeId} [${n.edgeType}] (${weight}%)`);
+                }
+            }
+        }
+    }
+});
+//# sourceMappingURL=graph.js.map

package/dist/commands/graph.js.map

@@ -0,0 +1 @@
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package/dist/commands/hierarchy.d.ts

@@ -0,0 +1,9 @@
+/**
+ * Hierarchy commands: children, tree
+ */
+import { Effect } from "effect";
+import { TaskService, type TaskNotFoundError, type DatabaseError } from "@jamesaphoenix/tx-core";
+import { type Flags } from "../utils/parse.js";
+export declare const children: (pos: string[], flags: Flags) => Effect.Effect<void, DatabaseError | TaskNotFoundError, TaskService>;
+export declare const tree: (pos: string[], flags: Flags) => Effect.Effect<void, DatabaseError | TaskNotFoundError, TaskService>;
+//# sourceMappingURL=hierarchy.d.ts.map

package/dist/commands/hierarchy.d.ts.map

@@ -0,0 +1 @@
+{"version":3,"file":"hierarchy.d.ts","sourceRoot":"","sources":["../../src/commands/hierarchy.ts"],"names":[],"mappings":"AAAA;;GAEG;AAEH,OAAO,EAAE,MAAM,EAAE,MAAM,QAAQ,CAAA;AAC/B,OAAO,EAAE,WAAW,EAAE,KAAK,iBAAiB,EAAE,KAAK,aAAa,EAAE,MAAM,wBAAwB,CAAA;AAGhG,OAAO,EAAE,KAAK,KAAK,EAAqB,MAAM,mBAAmB,CAAA;AAMjE,eAAO,MAAM,QAAQ,GAAI,KAAK,MAAM,EAAE,EAAE,OAAO,KAAK,wEAyBhD,CAAA;AAEJ,eAAO,MAAM,IAAI,GAAI,KAAK,MAAM,EAAE,EAAE,OAAO,KAAK,wEA2C5C,CAAA"}

package/dist/commands/hierarchy.js

@@ -0,0 +1,68 @@
+/**
+ * Hierarchy commands: children, tree
+ */
+import { Effect } from "effect";
+import { TaskService } from "@jamesaphoenix/tx-core";
+import { toJson, formatTaskLine } from "../output.js";
+import { flag, parseTaskId } from "../utils/parse.js";
+export const children = (pos, flags) => Effect.gen(function* () {
+    const raw = pos[0];
+    if (!raw) {
+        console.error("Usage: tx children <id> [--json]");
+        process.exit(1);
+    }
+    const id = parseTaskId(raw);
+    const svc = yield* TaskService;
+    const parent = yield* svc.getWithDeps(id);
+    const childTasks = yield* svc.listWithDeps({ parentId: id });
+    if (flag(flags, "json")) {
+        console.log(toJson(childTasks));
+    }
+    else {
+        if (childTasks.length === 0) {
+            console.log(`No children for ${parent.id} - ${parent.title}`);
+        }
+        else {
+            console.log(`${childTasks.length} child(ren) of ${parent.id} - ${parent.title}:`);
+            for (const c of childTasks) {
+                console.log(formatTaskLine(c));
+            }
+        }
+    }
+});
+export const tree = (pos, flags) => Effect.gen(function* () {
+    const raw = pos[0];
+    if (!raw) {
+        console.error("Usage: tx tree <id> [--json]");
+        process.exit(1);
+    }
+    const id = parseTaskId(raw);
+    const svc = yield* TaskService;
+    // Recursive tree builder
+    const buildTree = (taskId, depth) => Effect.gen(function* () {
+        const task = yield* svc.getWithDeps(parseTaskId(taskId));
+        const indent = "  ".repeat(depth);
+        const readyMark = task.isReady ? "+" : " ";
+        if (flag(flags, "json") && depth === 0) {
+            // For JSON, collect the full tree
+            const collectTree = (t) => Effect.gen(function* () {
+                const childTasks = yield* svc.listWithDeps({ parentId: t.id });
+                const childTrees = [];
+                for (const c of childTasks) {
+                    childTrees.push(yield* collectTree(c));
+                }
+                return { ...t, childTasks: childTrees };
+            });
+            const treeData = yield* collectTree(task);
+            console.log(toJson(treeData));
+            return;
+        }
+        console.log(`${indent}${readyMark} ${task.id} [${task.status}] [${task.score}] ${task.title}`);
+        const childTasks = yield* svc.listWithDeps({ parentId: taskId });
+        for (const child of childTasks) {
+            yield* buildTree(child.id, depth + 1);
+        }
+    });
+    yield* buildTree(id, 0);
+});
+//# sourceMappingURL=hierarchy.js.map

package/dist/commands/hierarchy.js.map

@@ -0,0 +1 @@
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package/dist/commands/hooks.d.ts

@@ -0,0 +1,56 @@
+/**
+ * Git hooks commands: hooks:install, hooks:uninstall, hooks:status
+ *
+ * Integrates tx with git post-commit hooks for automatic actions
+ * after commits (e.g., auto-sync).
+ */
+import { Effect } from "effect";
+import { type Flags } from "../utils/parse.js";
+/** Default configuration for .txrc */
+export interface TxrcConfig {
+    hooks?: {
+        enabled?: boolean;
+        fileThreshold?: number;
+        highValueFiles?: string[];
+        verifyOnCommit?: boolean;
+    };
+}
+/**
+ * Validate a file pattern for safe embedding in generated bash scripts.
+ * Rejects patterns containing shell metacharacters that could enable
+ * command injection when interpolated into grep -qE '...' expressions.
+ */
+export declare function isValidHookPattern(pattern: string): boolean;
+/**
+ * Read .txrc configuration file.
+ * Returns default config if file doesn't exist.
+ */
+export declare function readTxrc(projectDir: string): TxrcConfig;
+/**
+ * Write .txrc configuration file.
+ */
+export declare function writeTxrc(projectDir: string, config: TxrcConfig): void;
+/**
+ * Find git root directory from current directory.
+ */
+export declare function findGitRoot(startDir: string): string | null;
+/**
+ * Generate the post-commit hook script content.
+ */
+export declare function generatePostCommitHook(config: TxrcConfig): string;
+/**
+ * tx hooks:install [--force] [--threshold <n>] [--high-value <patterns>]
+ * Install post-commit hook for anchor verification
+ */
+export declare const hooksInstall: (_pos: string[], flags: Flags) => Effect.Effect<void, never, never>;
+/**
+ * tx hooks:uninstall
+ * Remove post-commit hook
+ */
+export declare const hooksUninstall: (_pos: string[], flags: Flags) => Effect.Effect<void, never, never>;
+/**
+ * tx hooks:status [--json]
+ * Show current hook status
+ */
+export declare const hooksStatus: (_pos: string[], flags: Flags) => Effect.Effect<void, never, never>;
+//# sourceMappingURL=hooks.d.ts.map

package/dist/commands/hooks.d.ts.map

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