@j0hanz/filesystem-mcp 2.7.6 → 2.8.1

package/dist/tools/create.js.map

@@ -1 +1 @@
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type { ContentBlock } from '@modelcontextprotocol/server';\n\nimport { basename, dirname } from 'node:path';\n\nimport * as z from 'zod/v4';\n\nimport { processInParallel } from '../core/concurrency.ts';\nimport {\n  ErrorCode,\n  formatUnknownErrorMessage,\n  FsError,\n  type Problem,\n  rethrowIfAborted,\n} from '../core/errors.ts';\nimport { buildWrittenFileMeta, writtenFileLinks, type WrittenFileMeta } from '../core/file-uri.ts';\nimport { countFileLines, destExists, type Stats } from '../core/fs.ts';\nimport {\n  confirmKey,\n  describeRefusal,\n  pendingRoundTrip,\n  readAcceptedChoice,\n} from '../core/input-required.ts';\nimport { detectMimeFromContent, type FileKind, MIME_SAMPLE_SIZE } from '../core/mime.ts';\nimport { isSamePath } from '../core/path-utils.ts';\nimport { RequiredPath } from '../core/schema.ts';\nimport { getMaxTextFileSize, PARALLEL_CONCURRENCY } from '../core/util.ts';\nimport { isTotalFailure, runOverPaths } from './batch.ts';\nimport { defineTool, type ToolCtx } from './define.ts';\n\nconst EPOCH = new Date(0);\n\nconst CreateFileItemSchema = z.strictObject({\n  path: RequiredPath.describe('Absolute path where the file will be created'),\n  content: z\n    .string()\n    .refine((val) => val.length <= getMaxTextFileSize(), {\n      message: 'Content exceeds maximum allowed text file size',\n    })\n    .describe('Text content to write, verbatim.'),\n  append: z\n    .boolean()\n    .optional()\n    .describe(\n      'Append the content to the end of the file instead of overwriting; creates the file if it does not exist',\n    ),\n  overwrite: z\n    .boolean()\n    .optional()\n    .describe(\n      'Replace an existing file without asking the user; without it an existing file prompts for confirmation',\n    ),\n});\n\ntype CreateFileResult = Omit<WrittenFileMeta, 'resourceLink'> & {\n  path: string;\n  created: string;\n  modified: string;\n};\n\nconst CreateInputSchema = z\n  .strictObject({\n    files: z\n      .array(CreateFileItemSchema)\n      .min(1)\n      .max(100)\n      .describe(\n        'List of files to create (max 100); each entry requires path and content; combined content is capped at the file-size limit',\n      ),\n  })\n  .superRefine((value, ctx) => {\n    // Entries write in parallel and each replaces its file whole, so two\n    // entries for one path race: the last rename wins and the other's\n    // content is lost while both report success. One entry per file.\n    for (const [index, file] of value.files.entries()) {\n      const first = value.files.findIndex((other) => isSamePath(other.path, file.path));\n      if (first < index) {\n        ctx.addIssue({\n          code: 'custom',\n          path: ['files', index, 'path'],\n          message: `duplicate of files[${String(first)}].path; one entry per file`,\n          input: value,\n        });\n      }\n    }\n    // One call's content is what one inbound message carries; the transports\n    // size their message bound from this same limit (getMaxInboundMessageBytes),\n    // so a batch that passes here always fits on the wire. Counted in the same\n    // UTF-16 units as the per-file refine above.\n    const total = value.files.reduce((sum, file) => sum + file.content.length, 0);\n    const limit = getMaxTextFileSize();\n    if (total > limit) {\n      ctx.addIssue({\n        code: 'custom',\n        path: ['files'],\n        message: `combined content is ${String(total)} characters; one create call carries at most ${String(limit)} (FS_MAX_FILE_SIZE). Split the batch.`,\n        input: value,\n      });\n    }\n  });\n\ninterface CreateFailureItem {\n  path: string;\n  error: Problem;\n}\n\ninterface CreateOutput {\n  files: CreateFileResult[];\n  failures?: CreateFailureItem[];\n  skipped?: string[];\n}\n\nexport const CREATE = defineTool<typeof CreateInputSchema, CreateOutput>({\n  name: 'create',\n  title: 'Create Files',\n  description:\n    'Write whole text files: create new ones, overwrite, or append. Missing parent directories are created. ' +\n    'edit or patch changes part of an existing file.',\n  input: CreateInputSchema,\n  readOnlyHint: false,\n  accessPaths: (args) => args.files.map((f) => f.path),\n  run: async (args, ctx) => {\n    // Phase 1 (no mutation): which entries would replace a file that exists\n    // right now? Those need the user's word before anything is written (R14).\n    // append never destroys, and overwrite: true is that word given up front.\n    // A path that fails validation here is left for runOverPaths to report.\n    // A file that appears between rounds needs no re-stat before the write:\n    // the retry re-plans, and the grown pending set fails the R9 check.\n    const { results: planned } = await processInParallel(\n      args.files,\n      async (entry) => {\n        if (entry.append || entry.overwrite) return undefined;\n        try {\n          const validPath = await ctx.fs.pathGuard.validatePathForWrite(entry.path);\n          return (await destExists(ctx.fs, validPath, 'create')) ? validPath : undefined;\n        } catch (error) {\n          rethrowIfAborted(error);\n          return undefined;\n        }\n      },\n      PARALLEL_CONCURRENCY,\n      ctx.signal,\n    );\n    const pendingByPath = new Map<string, string>();\n    for (const { index, value } of planned) {\n      const requested = args.files[index]?.path;\n      if (value && requested) pendingByPath.set(requested, value);\n    }\n    const pendingSorted = [...new Set(pendingByPath.values())].sort();\n    if (pendingSorted.length > 0) {\n      // Round 1 returns input_required; a retry whose verified state does not\n      // bind this overwrite set throws (R9) via `pendingRoundTrip`.\n      const round = await pendingRoundTrip(ctx, {\n        op: 'create',\n        pending: pendingSorted,\n        buildInputs: (paths) =>\n          paths.map((target, i) => ({\n            key: confirmKey(i),\n            message: `\"${target}\" already exists. Overwrite it?`,\n            choices: ['overwrite', 'skip'],\n          })),\n      });\n      if (round !== undefined) return round;\n    }\n\n    const batch = await runOverPaths<\n      z.infer<typeof CreateFileItemSchema>,\n      { file: CreateFileResult; resourceLink?: ContentBlock } | { skipped: string }\n    >(args.files, ctx, ErrorCode.UNKNOWN, async ({ path, content, append, overwrite }) => {\n      const pendingPath = pendingByPath.get(path);\n      if (pendingPath !== undefined) {\n        const key = confirmKey(pendingSorted.indexOf(pendingPath));\n        const choice = readAcceptedChoice(ctx.inputResponses, key);\n        if (choice === 'skip') return { skipped: path };\n        if (choice !== 'overwrite') {\n          throw new FsError(\n            ErrorCode.CANCELLED,\n            `create cancelled: overwrite of \"${path}\" was ${describeRefusal(ctx, key)}`,\n            path,\n          );\n        }\n      }\n\n      // Lock per resolved file so two entries naming one file (e.g. through a\n      // symlinked parent) cannot clobber each other.\n      return ctx.fs.lockForWrite(path, async (resolvedTarget) => {\n        // The file may have appeared since the overwrite set was planned.\n        if (\n          !append &&\n          !overwrite &&\n          pendingPath === undefined &&\n          (await destExists(ctx.fs, resolvedTarget, 'create'))\n        ) {\n          throw new FsError(\n            ErrorCode.INVALID_INPUT,\n            `create refused: \"${path}\" appeared after overwrite confirmation was checked`,\n            path,\n          );\n        }\n        return createOne(path, content, append, ctx);\n      });\n    });\n\n    const results: CreateFileResult[] = [];\n    const failures: CreateFailureItem[] = [];\n    const skipped: string[] = [];\n    const links: ContentBlock[] = [];\n    for (const r of batch.results) {\n      if ('error' in r) {\n        failures.push({ path: r.path, error: r.error });\n        continue;\n      }\n      if ('skipped' in r.value) {\n        skipped.push(r.value.skipped);\n        continue;\n      }\n      results.push(r.value.file);\n      if (r.value.resourceLink) links.push(r.value.resourceLink);\n    }\n\n    const structured = {\n      files: results,\n      ...(failures.length > 0 ? { failures } : {}),\n      ...(skipped.length > 0 ? { skipped } : {}),\n    };\n    // No `text` on purpose. The one-line roster this used to build named the\n    // paths and dropped every per-file size, line count and error the caller\n    // asked `create` for. Supplying no text makes this a data tool, so\n    // `define.ts` renders the JSON and keeps it in `structuredContent`.\n    if (links.length > 0) {\n      return { structured, resources: links, isError: isTotalFailure(batch.summary) };\n    }\n\n    return { structured, isError: isTotalFailure(batch.summary) };\n  },\n  progress: (args) => ({\n    label: 'Create',\n    subject:\n      args.files.length === 1\n        ? basename(args.files[0]?.path ?? '')\n        : `${String(args.files.length)} files`,\n  }),\n});\n\nasync function createOne(\n  path: string,\n  content: string,\n  append: boolean | undefined,\n  ctx: ToolCtx,\n): Promise<{ file: CreateFileResult; resourceLink?: ContentBlock }> {\n  await ctx.fs.mkdir(dirname(path), { recursive: true });\n\n  // Overwrite: file content == `content`, so content-derived meta is\n  // exact and the atomic temp+rename write protects the existing mode.\n  // Append: the resulting file is everything that was there plus\n  // `content`, so size/created/modified come from a real post-append\n  // stat, MIME from the resulting file's leading bytes, and the line\n  // count streams the file — reading a multi-GB log back whole is the\n  // round-trip append exists to avoid.\n  let validPath: string;\n  let meta: WrittenFileMeta;\n  let created: string;\n  let modified: string;\n  if (append) {\n    const appended = await ctx.fs.appendFile(path, content, {\n      signal: ctx.signal,\n    });\n    validPath = appended.validPath;\n    // The append is the commit point: the bytes are on disk, so\n    // everything below is best-effort RESULT METADATA, not part of the\n    // write. It runs unwired to ctx.signal, and a metadata failure\n    // degrades the result instead of failing it — either would report\n    // the append as failed and a client retry would append twice. The\n    // stat covers the committed validPath, never the input path: a\n    // symlink there could have been swapped between write and stat,\n    // and the result must describe the file the bytes landed in.\n    let stats: Stats | undefined;\n    let mimeType: string;\n    let kind: FileKind;\n    let lineCount = 0;\n    try {\n      stats = (await ctx.fs.stat(appended.validPath)).stats;\n      // Sniff the resulting file's leading bytes, not the appended\n      // chunk: text appended to a binary file is still a binary file.\n      const sample = await ctx.fs.readLeadingSample(appended.validPath, MIME_SAMPLE_SIZE);\n      const mimeInfo = detectMimeFromContent(appended.validPath, sample);\n      mimeType = mimeInfo.mimeType;\n      kind = mimeInfo.kind;\n      lineCount = await countFileLines(appended.validPath);\n    } catch (error) {\n      ctx.log(\n        'warning',\n        `create append: result metadata degraded for ${appended.validPath}: ${formatUnknownErrorMessage(error)}`,\n        'create',\n      );\n      // A POSIX mode-0222 file appends fine but cannot be opened 'r';\n      // fall back to the chunk for MIME (an approximation) and report\n      // the line count as unknown-as-zero rather than fail the append.\n      const mimeInfo = detectMimeFromContent(appended.validPath, content);\n      mimeType = mimeInfo.mimeType;\n      kind = mimeInfo.kind;\n    }\n    // A failed stat leaves the size unknown, so nothing is advertised.\n    meta = {\n      size: stats?.size ?? 0,\n      lineCount,\n      mimeType,\n      kind,\n      ...writtenFileLinks(\n        appended.validPath,\n        mimeType,\n        stats?.size,\n        false,\n        stats?.mtime.toISOString(),\n      ),\n    };\n    created = (stats?.birthtime ?? EPOCH).toISOString();\n    modified = (stats?.mtime ?? EPOCH).toISOString();\n  } else {\n    const written = await ctx.fs.writeFile(path, content, {\n      signal: ctx.signal,\n    });\n    validPath = written.validPath;\n    const fileStats = (await ctx.fs.stat(path, { signal: ctx.signal })).stats;\n    created = fileStats.birthtime.toISOString();\n    modified = fileStats.mtime.toISOString();\n    meta = buildWrittenFileMeta({\n      validPath: written.validPath,\n      content,\n      lastModified: modified,\n    });\n  }\n\n  const file: CreateFileResult = {\n    path: validPath,\n    size: meta.size,\n    lineCount: meta.lineCount,\n    mimeType: meta.mimeType,\n    kind: meta.kind,\n    resourceUri: meta.resourceUri,\n    created,\n    modified,\n  };\n\n  return meta.resourceLink ? { file, resourceLink: meta.resourceLink } : { file };\n}\n"]}
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type { ContentBlock } from '@modelcontextprotocol/server';\n\nimport { basename, dirname } from 'node:path';\n\nimport * as z from 'zod/v4';\n\nimport { processInParallel } from '../core/concurrency.ts';\nimport {\n  ErrorCode,\n  formatUnknownErrorMessage,\n  FsError,\n  type Problem,\n  rethrowIfAborted,\n} from '../core/errors.ts';\nimport { buildWrittenFileMeta, writtenFileLinks, type WrittenFileMeta } from '../core/file-uri.ts';\nimport { destExists, type Stats } from '../core/fs.ts';\nimport { confirmKey, pendingRoundTrip, readPendingVerdict } from '../core/input-required.ts';\nimport { detectMimeFromContent, type FileKind } from '../core/mime.ts';\nimport { isSamePath } from '../core/path-utils.ts';\nimport { RequiredPath } from '../core/schema.ts';\nimport { getMaxTextFileSize, PARALLEL_CONCURRENCY } from '../core/util.ts';\nimport { isTotalFailure, runOverPaths } from './batch.ts';\nimport { defineTool, type ToolCtx } from './define.ts';\n\nconst EPOCH = new Date(0);\n\nconst CreateFileItemSchema = z.strictObject({\n  path: RequiredPath.describe('Absolute path where the file will be created'),\n  content: z\n    .string()\n    .refine((val) => val.length <= getMaxTextFileSize(), {\n      message: 'Content exceeds maximum allowed text file size',\n    })\n    .describe('Text content to write, verbatim.'),\n  append: z\n    .boolean()\n    .optional()\n    .describe(\n      'Append the content to the end of the file instead of overwriting; creates the file if it does not exist',\n    ),\n  overwrite: z\n    .boolean()\n    .optional()\n    .describe(\n      'Replace an existing file without asking the user; without it an existing file prompts for confirmation',\n    ),\n});\n\ntype CreateFileResult = Omit<WrittenFileMeta, 'resourceLink'> & {\n  path: string;\n  created: string;\n  modified: string;\n};\n\nconst CreateInputSchema = z\n  .strictObject({\n    files: z\n      .array(CreateFileItemSchema)\n      .min(1)\n      .max(100)\n      .describe(\n        'List of files to create (max 100); each entry requires path and content; combined content is capped at the file-size limit',\n      ),\n  })\n  .superRefine((value, ctx) => {\n    // Entries write in parallel and each replaces its file whole, so two\n    // entries for one path race: the last rename wins and the other's\n    // content is lost while both report success. One entry per file.\n    for (const [index, file] of value.files.entries()) {\n      const first = value.files.findIndex((other) => isSamePath(other.path, file.path));\n      if (first < index) {\n        ctx.addIssue({\n          code: 'custom',\n          path: ['files', index, 'path'],\n          message: `duplicate of files[${String(first)}].path; one entry per file`,\n          input: value,\n        });\n      }\n    }\n    // One call's content is what one inbound message carries; the transports\n    // size their message bound from this same limit (getMaxInboundMessageBytes),\n    // so a batch that passes here always fits on the wire. Counted in the same\n    // UTF-16 units as the per-file refine above.\n    const total = value.files.reduce((sum, file) => sum + file.content.length, 0);\n    const limit = getMaxTextFileSize();\n    if (total > limit) {\n      ctx.addIssue({\n        code: 'custom',\n        path: ['files'],\n        message: `combined content is ${String(total)} characters; one create call carries at most ${String(limit)} (FS_MAX_FILE_SIZE). Split the batch.`,\n        input: value,\n      });\n    }\n  });\n\ninterface CreateFailureItem {\n  path: string;\n  error: Problem;\n}\n\ninterface CreateOutput {\n  files: CreateFileResult[];\n  failures?: CreateFailureItem[];\n  skipped?: string[];\n}\n\nexport const CREATE = defineTool<typeof CreateInputSchema, CreateOutput>({\n  name: 'create',\n  title: 'Create Files',\n  description:\n    'Write whole text files: create new ones, overwrite, or append. Missing parent directories are created. ' +\n    'edit or patch changes part of an existing file.',\n  input: CreateInputSchema,\n  readOnlyHint: false,\n  accessPaths: (args) => args.files.map((f) => f.path),\n  run: async (args, ctx) => {\n    // Phase 1 (no mutation): which entries would replace a file that exists\n    // right now? Those need the user's word before anything is written (R14).\n    // append never destroys, and overwrite: true is that word given up front.\n    // A path that fails validation here is left for runOverPaths to report.\n    // A file that appears between rounds needs no re-stat before the write:\n    // the retry re-plans, and the grown pending set fails the R9 check.\n    const { results: planned } = await processInParallel(\n      args.files,\n      async (entry) => {\n        if (entry.append || entry.overwrite) return undefined;\n        try {\n          const validPath = await ctx.fs.pathGuard.validatePathForWrite(entry.path);\n          return (await destExists(ctx.fs, validPath, 'create')) ? validPath : undefined;\n        } catch (error) {\n          rethrowIfAborted(error);\n          return undefined;\n        }\n      },\n      PARALLEL_CONCURRENCY,\n      ctx.signal,\n    );\n    const pendingByPath = new Map<string, string>();\n    for (const { index, value } of planned) {\n      const requested = args.files[index]?.path;\n      if (value && requested) pendingByPath.set(requested, value);\n    }\n    const pendingSorted = [...new Set(pendingByPath.values())].sort();\n    if (pendingSorted.length > 0) {\n      // Round 1 returns input_required; a retry whose verified state does not\n      // bind this overwrite set throws (R9) via `pendingRoundTrip`.\n      const round = await pendingRoundTrip(ctx, {\n        op: 'create',\n        pending: pendingSorted,\n        buildInputs: (paths) =>\n          paths.map((target, i) => ({\n            key: confirmKey(i),\n            message: `\"${target}\" already exists. Overwrite it?`,\n            choices: ['overwrite', 'skip'],\n          })),\n      });\n      if (round !== undefined) return round;\n    }\n\n    const batch = await runOverPaths<\n      z.infer<typeof CreateFileItemSchema>,\n      { file: CreateFileResult; resourceLink?: ContentBlock } | { skipped: string }\n    >(args.files, ctx, ErrorCode.UNKNOWN, async ({ path, content, append, overwrite }) => {\n      const pendingPath = pendingByPath.get(path);\n      if (pendingPath !== undefined) {\n        const verdict = readPendingVerdict(ctx, pendingSorted, pendingPath, 'overwrite');\n        if (verdict === 'skipped') return { skipped: path };\n        if (verdict !== 'accepted') {\n          throw new FsError(\n            ErrorCode.CANCELLED,\n            `create cancelled: overwrite of \"${path}\" was ${verdict.refused}`,\n            path,\n          );\n        }\n      }\n\n      // Lock per resolved file so two entries naming one file (e.g. through a\n      // symlinked parent) cannot clobber each other.\n      return ctx.fs.lockForWrite(path, async (resolvedTarget) => {\n        // The file may have appeared since the overwrite set was planned.\n        if (\n          !append &&\n          !overwrite &&\n          pendingPath === undefined &&\n          (await destExists(ctx.fs, resolvedTarget, 'create'))\n        ) {\n          throw new FsError(\n            ErrorCode.INVALID_INPUT,\n            `create refused: \"${path}\" appeared after overwrite confirmation was checked`,\n            path,\n          );\n        }\n        return createOne(path, content, append, ctx);\n      });\n    });\n\n    const results: CreateFileResult[] = [];\n    const failures: CreateFailureItem[] = [];\n    const skipped: string[] = [];\n    const links: ContentBlock[] = [];\n    for (const r of batch.results) {\n      if ('error' in r) {\n        failures.push({ path: r.path, error: r.error });\n        continue;\n      }\n      if ('skipped' in r.value) {\n        skipped.push(r.value.skipped);\n        continue;\n      }\n      results.push(r.value.file);\n      if (r.value.resourceLink) links.push(r.value.resourceLink);\n    }\n\n    const structured = {\n      files: results,\n      ...(failures.length > 0 ? { failures } : {}),\n      ...(skipped.length > 0 ? { skipped } : {}),\n    };\n    // No `text` on purpose. The one-line roster this used to build named the\n    // paths and dropped every per-file size, line count and error the caller\n    // asked `create` for. Supplying no text makes this a data tool, so\n    // `define.ts` renders the JSON and keeps it in `structuredContent`.\n    return { structured, resources: links, isError: isTotalFailure(batch.summary) };\n  },\n  progress: (args) => ({\n    label: 'Create',\n    subject:\n      args.files.length === 1\n        ? basename(args.files[0]?.path ?? '')\n        : `${String(args.files.length)} files`,\n  }),\n});\n\nasync function createOne(\n  path: string,\n  content: string,\n  append: boolean | undefined,\n  ctx: ToolCtx,\n): Promise<{ file: CreateFileResult; resourceLink?: ContentBlock }> {\n  await ctx.fs.mkdir(dirname(path), { recursive: true });\n\n  // Overwrite: file content == `content`, so content-derived meta is\n  // exact and the atomic temp+rename write protects the existing mode.\n  // Append: the resulting file is everything that was there plus\n  // `content`, so size/created/modified come from a real post-append\n  // stat, MIME from the resulting file's leading bytes, and the line\n  // count streams the file — reading a multi-GB log back whole is the\n  // round-trip append exists to avoid.\n  let validPath: string;\n  let meta: WrittenFileMeta;\n  let created: string;\n  let modified: string;\n  if (append) {\n    const appended = await ctx.fs.appendFile(path, content, {\n      signal: ctx.signal,\n    });\n    validPath = appended.validPath;\n    // The append is the commit point: the bytes are on disk, so\n    // everything below is best-effort RESULT METADATA, not part of the\n    // write. It runs unwired to ctx.signal, and a metadata failure\n    // degrades the result instead of failing it — either would report\n    // the append as failed and a client retry would append twice. The\n    // stat covers the committed validPath, never the input path: a\n    // symlink there could have been swapped between write and stat,\n    // and the result must describe the file the bytes landed in.\n    let stats: Stats | undefined;\n    let mimeType: string;\n    let kind: FileKind;\n    let lineCount = 0;\n    try {\n      stats = (await ctx.fs.stat(appended.validPath)).stats;\n      // Sniff the resulting file's leading bytes, not the appended\n      // chunk: text appended to a binary file is still a binary file.\n      const sample = await ctx.fs.readLeadingSample(appended.validPath);\n      const mimeInfo = detectMimeFromContent(appended.validPath, sample);\n      mimeType = mimeInfo.mimeType;\n      kind = mimeInfo.kind;\n      lineCount = await ctx.fs.countFileLines(appended.validPath);\n    } catch (error) {\n      ctx.log(\n        'warning',\n        `create append: result metadata degraded for ${appended.validPath}: ${formatUnknownErrorMessage(error)}`,\n        'create',\n      );\n      // A POSIX mode-0222 file appends fine but cannot be opened 'r';\n      // fall back to the chunk for MIME (an approximation) and report\n      // the line count as unknown-as-zero rather than fail the append.\n      const mimeInfo = detectMimeFromContent(appended.validPath, content);\n      mimeType = mimeInfo.mimeType;\n      kind = mimeInfo.kind;\n    }\n    // A failed stat leaves the size unknown, so nothing is advertised.\n    meta = {\n      size: stats?.size ?? 0,\n      lineCount,\n      mimeType,\n      kind,\n      ...writtenFileLinks(\n        appended.validPath,\n        mimeType,\n        stats?.size,\n        false,\n        stats?.mtime.toISOString(),\n      ),\n    };\n    created = (stats?.birthtime ?? EPOCH).toISOString();\n    modified = (stats?.mtime ?? EPOCH).toISOString();\n  } else {\n    const written = await ctx.fs.writeFile(path, content, {\n      signal: ctx.signal,\n    });\n    validPath = written.validPath;\n    const fileStats = (await ctx.fs.stat(path, { signal: ctx.signal })).stats;\n    created = fileStats.birthtime.toISOString();\n    modified = fileStats.mtime.toISOString();\n    meta = buildWrittenFileMeta({\n      validPath: written.validPath,\n      content,\n      lastModified: modified,\n    });\n  }\n\n  const { resourceLink, ...fileMeta } = meta;\n  const file: CreateFileResult = { path: validPath, ...fileMeta, created, modified };\n\n  return resourceLink ? { file, resourceLink } : { file };\n}\n"]}

package/dist/tools/define.d.ts

@@ -1,4 +1,4 @@
-import type { ClientCapabilities, ContentBlock, InputRequiredResult, McpServer, Notification, RegisteredTool, RequestId, RequestMeta, RequestStateAccessor, ServerContext } from '@modelcontextprotocol/server';
+import type { ClientCapabilities, ContentBlock, InputRequiredResult, McpServer, RegisteredTool, RequestId, RequestStateAccessor, ServerContext } from '@modelcontextprotocol/server';
 import type * as z from 'zod/v4';
 import { ErrorCode } from '../core/errors.ts';
 import type { ProgressCtx } from '../core/fmt.ts';
@@ -8,17 +8,13 @@ import type { PathGuard } from '../core/path.ts';
 import type { PageSnapshotStore, ResourceStore } from '../core/store.ts';
 export interface ToolCtx {
     readonly signal: AbortSignal;
-    readonly _meta?: RequestMeta | undefined;
     /** The JSON-RPC id of the `tools/call` this context serves; prefixes every log line. */
     readonly requestId: RequestId;
-    /** W3C trace context the client put in `_meta`, when it did; rides the log prefix. */
-    readonly traceparent?: string | undefined;
     readonly fs: GuardedFileSystem;
     readonly pageStore: PageSnapshotStore;
     readonly resourceStore: ResourceStore;
     /** Emits a log line to stderr via `Logger.emit`, gated by `FS_LOG_LEVEL`. */
     readonly log: (level: LoggingLevel, data: unknown, logger?: string) => void;
-    readonly sendNotification: (notification: Notification) => Promise<void>;
     readonly onProgress: (params: {
         current: number;
         total?: number;
@@ -59,10 +55,10 @@ export interface ToolCtx {
     readonly clientCapabilities?: ClientCapabilities | undefined;
     /** The SDK request context this call runs under; `pendingRoundTrip` binds minted state to it. */
     readonly serverCtx: ServerContext;
-    /** `stdio` alone has a 10 MiB frame limit; unset on HTTP and the in-memory test pair. */
+    /** `stdio` alone has a 10 MiB frame limit; `http` on HTTP, unset on the in-memory test pair. */
     readonly transport?: 'stdio' | 'http' | undefined;
 }
-interface ToolDeps {
+export interface ToolDeps {
     readonly server: McpServer;
     readonly pathGuard: PathGuard;
     readonly pageStore: PageSnapshotStore;
@@ -102,6 +98,11 @@ export interface ToolDef<I extends z.ZodType, O extends object> {
      */
     readonly accessPaths?: (args: z.infer<I>) => readonly string[];
     readonly run: (args: z.infer<I>, ctx: ToolCtx) => Promise<RunResult<O> | InputRequiredResult>;
+    /**
+     * What the stdio size refusal tells the caller to do instead, for a tool
+     * that knows better than the generic advice (see `refuseOversized`).
+     */
+    readonly oversizeRemedy?: (result: RunResult<O>) => string;
 }
 export interface DefinedTool {
     readonly name: string;

package/dist/tools/define.d.ts.map

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package/dist/tools/define.js

@@ -1,11 +1,12 @@
 import { CLIENT_CAPABILITIES_META_KEY, isInputRequiredResult, TRACEPARENT_META_KEY, } from '@modelcontextprotocol/server';
-import { ErrorCode, formatUnknownErrorMessage, Problem } from "../core/errors.js";
+import { ErrorCode, formatUnknownErrorMessage, FsError, Problem } from "../core/errors.js";
 import { plainMessage } from "../core/fmt.js";
 import { GuardedFileSystem } from "../core/fs.js";
 import { confirmKey, pendingRoundTrip, readAcceptedConfirm, readAcceptedMultiChoice, } from "../core/input-required.js";
 import { Logger, sanitizeLogField } from "../core/observability.js";
 import { isSamePath } from "../core/path-utils.js";
 import { withSplitArgsRecovery } from "../core/schema.js";
+import { jsonBytesOver, MAX_OUTBOUND_RESULT_BYTES } from "../core/util.js";
 import { ProgressSession } from "./progress.js";
 function toToolCtx(ctx, deps) {
     // Envelope first, accessor second — the two eras carry this differently.
@@ -33,15 +34,10 @@ function toToolCtx(ctx, deps) {
         (deps.era === 'legacy' ? {} : undefined);
     return {
         signal: ctx.mcpReq.signal,
-        ...(ctx.mcpReq._meta ? { _meta: ctx.mcpReq._meta } : {}),
         requestId: ctx.mcpReq.id,
-        ...(typeof ctx.mcpReq._meta?.[TRACEPARENT_META_KEY] === 'string'
-            ? { traceparent: ctx.mcpReq._meta[TRACEPARENT_META_KEY] }
-            : {}),
         fs: new GuardedFileSystem(deps.pathGuard),
         pageStore: deps.pageStore,
         resourceStore: deps.resourceStore,
-        sendNotification: async (notification) => ctx.mcpReq.notify(notification),
         inputResponses: ctx.mcpReq.inputResponses,
         droppedInputResponseKeys: ctx.mcpReq.droppedInputResponseKeys,
         requestState: ctx.mcpReq.requestState,
@@ -85,14 +81,21 @@ class ToolExecutor {
             ? AbortSignal.any([ctx.signal, AbortSignal.timeout(def.timeoutMs)])
             : ctx.signal;
         this.#progressCtx = def.progress ? def.progress(parsedArgs) : { label: def.title };
-        const token = ctx._meta?.progressToken;
+        const { mcpReq } = ctx.serverCtx;
+        const token = mcpReq._meta?.progressToken;
+        const notify = async (notification) => mcpReq.notify(notification);
         this.#progressSession = new ProgressSession({
             label: this.#progressCtx.label,
-            ...(token !== undefined ? { sink: { toolName, token, notify: ctx.sendNotification } } : {}),
+            ...(token !== undefined ? { sink: { toolName, token, notify } } : {}),
         });
+        const traceparent = mcpReq._meta?.[TRACEPARENT_META_KEY];
         this.toolCtx = {
             ...ctx,
             signal: this.signal,
+            // Per-call views, so a response refused after `run` can take back the
+            // cached result and page snapshot behind a link or cursor it never sent.
+            pageStore: ctx.pageStore.forCall(),
+            resourceStore: ctx.resourceStore.forCall(),
             log: (level, data, logger) => {
                 const msg = typeof data === 'string' ? data : String(data);
                 // `[req <id>]` first so one grep finds every line of one call; the
@@ -102,7 +105,7 @@ class ToolExecutor {
                 // The message is flattened too (uncapped): it can carry a resolved
                 // path or OS error text, and input schemas reject CR/LF but not the
                 // Unicode line separators.
-                const trace = ctx.traceparent ? ` ${sanitizeLogField(ctx.traceparent)}` : '';
+                const trace = typeof traceparent === 'string' ? ` ${sanitizeLogField(traceparent)}` : '';
                 const prefix = logger ? `[${logger}] ` : '';
                 const text = sanitizeLogField(msg, Infinity);
                 Logger.emit(level, `[req ${sanitizeLogField(String(ctx.requestId))}${trace}] ${prefix}${text}`);
@@ -120,17 +123,15 @@ class ToolExecutor {
         };
         this.#progressSession.set({ ...p, message: plainMessage('tick', tickCtx) });
     }
-    async completeProgress(result) {
+    completeProgress(result) {
         const doneCtx = this.def.progressDone
             ? { ...this.#progressCtx, ...this.def.progressDone(this.parsedArgs, result) }
             : this.#progressCtx;
         this.#progressSession.complete(plainMessage('done', doneCtx));
-        await this.#progressSession.flush();
     }
-    async failProgress(error) {
+    failProgress(error) {
         const errMsg = formatUnknownErrorMessage(error);
         this.#progressSession.fail(plainMessage('fail', { ...this.#progressCtx, error: errMsg }));
-        await this.#progressSession.flush();
         const errorText = Problem.toText(error, this.def.defaultErrorCode ?? ErrorCode.UNKNOWN);
         return {
             content: [{ type: 'text', text: errorText }],
@@ -206,6 +207,35 @@ class ToolExecutor {
         }
         return undefined;
     }
+    /**
+     * stdio's SDK reader drops the connection on a message past 10 MiB, so a
+     * response that would overflow it becomes TOO_LARGE instead. Only a call
+     * that changed nothing can be refused after `run` — a read-only tool, or a
+     * dry run (every tool with `dryRun` writes nothing under it); a mutation may
+     * already have committed. The whole encoded response counts, duplicated
+     * metadata and escaping included; the ceiling leaves room for the envelope.
+     */
+    refuseOversized(result, response) {
+        if (this.toolCtx.transport !== 'stdio')
+            return;
+        const dryRun = this.parsedArgs.dryRun === true;
+        if (!this.def.readOnlyHint && !dryRun)
+            return;
+        const encodedBytes = jsonBytesOver(response, MAX_OUTBOUND_RESULT_BYTES);
+        if (encodedBytes === undefined)
+            return;
+        // The client never receives the link or cursor these back, so they would
+        // only push live entries out of the stores' caps.
+        this.toolCtx.resourceStore.discard();
+        this.toolCtx.pageStore.discard();
+        const remedy = this.def.oversizeRemedy?.(result) ??
+            (dryRun
+                ? 'Nothing was written. Preview fewer files or a smaller file per call, or connect over HTTP.'
+                : 'Reduce the requested output or connect over HTTP.');
+        // The remedy stands in for TOO_LARGE's default head/tail advice, which
+        // fits neither media nor a dry run.
+        throw new FsError(ErrorCode.TOO_LARGE, `${this.def.name} result too large to return (${String(encodedBytes)} bytes once JSON-encoded, over the ${String(MAX_OUTBOUND_RESULT_BYTES)}-byte stdio message limit).`, undefined, undefined, remedy);
+    }
     async execute() {
         try {
             // Access-grant pre-check before any filesystem touch (R7/R8/R9). A
@@ -224,11 +254,13 @@ class ToolExecutor {
             if (isInputRequiredResult(result)) {
                 return result;
             }
-            await this.completeProgress(result.structured);
-            return buildSuccessResponse(result);
+            const response = buildSuccessResponse(result);
+            this.refuseOversized(result, response);
+            this.completeProgress(result.structured);
+            return response;
         }
         catch (error) {
-            return await this.failProgress(error);
+            return this.failProgress(error);
         }
         finally {
             await this.#progressSession.flush();

package/dist/tools/define.js.map

@@ -1 +1 @@
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type {\n  CallToolResult,\n  ClientCapabilities,\n  ContentBlock,\n  InputRequiredResult,\n  McpServer,\n  Notification,\n  RegisteredTool,\n  RequestId,\n  RequestMeta,\n  RequestStateAccessor,\n  ServerContext,\n  StandardSchemaWithJSON,\n  ToolAnnotations,\n} from '@modelcontextprotocol/server';\nimport {\n  CLIENT_CAPABILITIES_META_KEY,\n  isInputRequiredResult,\n  TRACEPARENT_META_KEY,\n} from '@modelcontextprotocol/server';\n\nimport type * as z from 'zod/v4';\n\nimport { ErrorCode, formatUnknownErrorMessage, Problem } from '../core/errors.ts';\nimport type { ProgressCtx } from '../core/fmt.ts';\nimport { plainMessage } from '../core/fmt.ts';\nimport { GuardedFileSystem } from '../core/fs.ts';\nimport {\n  confirmKey,\n  pendingRoundTrip,\n  readAcceptedConfirm,\n  readAcceptedMultiChoice,\n} from '../core/input-required.ts';\nimport { Logger, sanitizeLogField } from '../core/observability.ts';\nimport type { LoggingLevel } from '../core/observability.ts';\nimport { isSamePath } from '../core/path-utils.ts';\nimport type { PathGuard } from '../core/path.ts';\nimport { withSplitArgsRecovery } from '../core/schema.ts';\nimport type { PageSnapshotStore, ResourceStore } from '../core/store.ts';\nimport { ProgressSession } from './progress.ts';\n\nexport interface ToolCtx {\n  readonly signal: AbortSignal;\n  readonly _meta?: RequestMeta | undefined;\n  /** The JSON-RPC id of the `tools/call` this context serves; prefixes every log line. */\n  readonly requestId: RequestId;\n  /** W3C trace context the client put in `_meta`, when it did; rides the log prefix. */\n  readonly traceparent?: string | undefined;\n  readonly fs: GuardedFileSystem;\n  readonly pageStore: PageSnapshotStore;\n  readonly resourceStore: ResourceStore;\n  /** Emits a log line to stderr via `Logger.emit`, gated by `FS_LOG_LEVEL`. */\n  readonly log: (level: LoggingLevel, data: unknown, logger?: string) => void;\n  readonly sendNotification: (notification: Notification) => Promise<void>;\n  readonly onProgress: (params: { current: number; total?: number }) => void;\n  /**\n   * Multi-round-trip `inputResponses` carried by a retried `tools/call`\n   * (protocol revision 2026-07-28); `undefined` on the first round. Bare,\n   * unvalidated client values — handlers read them through\n   * `readAcceptedConfirm`.\n   */\n  readonly inputResponses?: Record<string, unknown> | undefined;\n  /**\n   * Keys of `inputResponses` entries the SDK dropped on this round because\n   * they were not bare results (the `{ method, result }` wrapper some hosts\n   * send). `pendingRoundTrip` re-issues a confirmation whose key is listed\n   * here once; `describeRefusal` names the cause after that.\n   */\n  readonly droppedInputResponseKeys?: readonly string[] | undefined;\n  /**\n   * Reads the verified multi-round-trip `requestState` for the current round:\n   * the decoded `PendingState` the `requestStateCodec` verified, or `undefined`\n   * when the round carried no state (the first round). `undefined` when no\n   * live request context is available.\n   */\n  readonly requestState?: RequestStateAccessor | undefined;\n  /**\n   * What the connected client declared it can do, or `undefined` when this\n   * connection cannot say. Read by the `input_required` flows: an embedded\n   * elicitation sent to a client that never declared `elicitation` is rejected\n   * by the SDK with `-32021` before it reaches the wire, so the handlers check\n   * first and answer with an actionable tool error instead.\n   *\n   * Two sources, because the eras differ: a legacy connection negotiated them\n   * at `initialize` (`Server.getClientCapabilities()`), a modern one carries\n   * them per request in the `_meta` envelope and never runs `initialize` at\n   * all. `undefined` means \"cannot tell\" — never \"no capabilities\".\n   */\n  readonly clientCapabilities?: ClientCapabilities | undefined;\n  /** The SDK request context this call runs under; `pendingRoundTrip` binds minted state to it. */\n  readonly serverCtx: ServerContext;\n  /** `stdio` alone has a 10 MiB frame limit; unset on HTTP and the in-memory test pair. */\n  readonly transport?: 'stdio' | 'http' | undefined;\n}\n\ninterface ToolDeps {\n  readonly server: McpServer;\n  readonly pathGuard: PathGuard;\n  readonly pageStore: PageSnapshotStore;\n  readonly resourceStore: ResourceStore;\n  readonly era?: 'legacy' | 'modern';\n  readonly transport?: 'stdio' | 'http';\n}\n\ninterface RunResult<T> {\n  readonly structured: T;\n  readonly text?: string;\n  readonly resources?: ContentBlock[];\n  /**\n   * The call as a whole failed. Batch tools set it from `isTotalFailure` in\n   * `batch.ts` — every requested item failed — so the executor never has to\n   * know a tool's output shape. Absent or `false` means the call did work.\n   */\n  readonly isError?: boolean;\n}\n\nexport interface ToolDef<I extends z.ZodType, O extends object> {\n  readonly name: string;\n  readonly title: string;\n  readonly description: string;\n  readonly input: I;\n  /** Required: drives both the --read-only gate and published annotations. */\n  readonly readOnlyHint: boolean;\n  readonly timeoutMs?: number;\n  readonly progress?: (args: z.infer<I>) => ProgressCtx;\n  readonly progressDone?: (args: z.infer<I>, result: O) => Partial<ProgressCtx>;\n  readonly defaultErrorCode?: ErrorCode;\n  /**\n   * The filesystem paths this tool will operate on, extracted from its parsed\n   * args. The executor runs an access-grant pre-check over these BEFORE `run`\n   * (R7): any path outside the granted roots yields an `input_required`\n   * round-trip requesting a grant, and nothing is touched until the client\n   * retries with an accepted grant (R8). Omit for tools that do not operate on\n   * caller-supplied filesystem paths.\n   */\n  readonly accessPaths?: (args: z.infer<I>) => readonly string[];\n  readonly run: (args: z.infer<I>, ctx: ToolCtx) => Promise<RunResult<O> | InputRequiredResult>;\n}\n\nexport interface DefinedTool {\n  readonly name: string;\n  readonly readOnlyHint: boolean;\n\n  register(deps: ToolDeps): RegisteredTool;\n}\n\nfunction toToolCtx(\n  ctx: ServerContext,\n  deps: Pick<\n    ToolDeps,\n    'pathGuard' | 'pageStore' | 'resourceStore' | 'server' | 'era' | 'transport'\n  >,\n): Omit<ToolCtx, 'log' | 'onProgress'> {\n  // Envelope first, accessor second — the two eras carry this differently.\n  // A modern request states the capabilities in its own `_meta` envelope; a\n  // legacy connection fixed them at `initialize` and has no envelope at all.\n  // The deprecated accessor still answers for both today (the SDK backfills it\n  // per request from the validated envelope on modern instances), but reading\n  // the envelope directly is the supported path, so it leads: when the accessor\n  // goes, legacy degrades to \"cannot tell\", which fails open to the behavior\n  // that predates this check.\n  //\n  // The cast is the SDK's shipped `RequestMetaEnvelope` declaration collapsing\n  // to `{}` — the reserved keys survive at runtime but not in the .d.ts, so the\n  // key constant cannot index the declared type.\n  const envelope = ctx.mcpReq.envelope as Record<string, unknown> | undefined;\n  const clientCapabilities =\n    (envelope?.[CLIENT_CAPABILITIES_META_KEY] as ClientCapabilities | undefined) ??\n    // eslint-disable-next-line @typescript-eslint/no-deprecated -- the only source of client capabilities on a legacy connection, where no envelope exists.\n    deps.server.server.getClientCapabilities() ??\n    // A legacy instance that never saw `initialize` is the HTTP leg's\n    // per-request serving (`createMcpHandler` with `legacy: 'stateless'`):\n    // there is no return path for a server-to-client request, so read the\n    // client as having declared nothing. The `input_required` flows then\n    // answer with their named workaround instead of the SDK's generic refusal.\n    // sunset(SEP-2577): removal trigger in docs/adr/002-legacy-protocol-paths-sunset.md.\n    (deps.era === 'legacy' ? {} : undefined);\n\n  return {\n    signal: ctx.mcpReq.signal,\n    ...(ctx.mcpReq._meta ? { _meta: ctx.mcpReq._meta } : {}),\n    requestId: ctx.mcpReq.id,\n    ...(typeof ctx.mcpReq._meta?.[TRACEPARENT_META_KEY] === 'string'\n      ? { traceparent: ctx.mcpReq._meta[TRACEPARENT_META_KEY] }\n      : {}),\n    fs: new GuardedFileSystem(deps.pathGuard),\n    pageStore: deps.pageStore,\n    resourceStore: deps.resourceStore,\n    sendNotification: async (notification) => ctx.mcpReq.notify(notification),\n    inputResponses: ctx.mcpReq.inputResponses,\n    droppedInputResponseKeys: ctx.mcpReq.droppedInputResponseKeys,\n    requestState: ctx.mcpReq.requestState,\n    serverCtx: ctx,\n    ...(clientCapabilities ? { clientCapabilities } : {}),\n    ...(deps.transport ? { transport: deps.transport } : {}),\n  };\n}\n\n/**\n * Claude Code — and any client that treats `structuredContent` as the canonical\n * model view — discards the `text` blocks when `structuredContent` is present,\n * showing the model `JSON.stringify(structuredContent)` instead. A tool that\n * authored a text result (list's ASCII tree, read's file) meant that text for\n * the model, so it ships its metadata under `_meta`, which no client renders in\n * place of the content. Tools with no `text` keep `structuredContent`: the JSON\n * *is* their model-facing view.\n */\nfunction buildSuccessResponse<O extends object>(result: RunResult<O>): CallToolResult {\n  const hasText = result.text !== undefined;\n  const text = result.text ?? JSON.stringify(result.structured);\n  const content: ContentBlock[] = [{ type: 'text' as const, text }, ...(result.resources ?? [])];\n  return {\n    content,\n    ...(hasText // Result interfaces have named fields; the SDK metadata requires an index signature.\n      ? { _meta: result.structured as Record<string, unknown> }\n      : { structuredContent: result.structured }),\n    ...(result.isError ? { isError: true } : {}),\n  };\n}\n\nclass ToolExecutor<I extends z.ZodType, O extends object> {\n  readonly signal: AbortSignal;\n  private readonly def: ToolDef<I, O>;\n  private readonly parsedArgs: z.infer<I>;\n  private readonly toolCtx: ToolCtx;\n\n  readonly #progressCtx: ProgressCtx;\n  readonly #progressSession: ProgressSession;\n\n  constructor(\n    toolName: string,\n    ctx: Omit<ToolCtx, 'log' | 'onProgress'>,\n    def: ToolDef<I, O>,\n    parsedArgs: z.infer<I>,\n  ) {\n    this.def = def;\n    this.parsedArgs = parsedArgs;\n    this.signal = def.timeoutMs\n      ? AbortSignal.any([ctx.signal, AbortSignal.timeout(def.timeoutMs)])\n      : ctx.signal;\n    this.#progressCtx = def.progress ? def.progress(parsedArgs) : { label: def.title };\n    const token = ctx._meta?.progressToken;\n    this.#progressSession = new ProgressSession({\n      label: this.#progressCtx.label,\n      ...(token !== undefined ? { sink: { toolName, token, notify: ctx.sendNotification } } : {}),\n    });\n    this.toolCtx = {\n      ...ctx,\n      signal: this.signal,\n      log: (level: LoggingLevel, data: unknown, logger?: string) => {\n        const msg = typeof data === 'string' ? data : String(data);\n        // `[req <id>]` first so one grep finds every line of one call; the\n        // traceparent rides along only when the client sent one. Both are\n        // client-supplied, so they pass through `sanitizeLogField`: a control\n        // character in a JSON-RPC id or a traceparent would forge log lines.\n        // The message is flattened too (uncapped): it can carry a resolved\n        // path or OS error text, and input schemas reject CR/LF but not the\n        // Unicode line separators.\n        const trace = ctx.traceparent ? ` ${sanitizeLogField(ctx.traceparent)}` : '';\n        const prefix = logger ? `[${logger}] ` : '';\n        const text = sanitizeLogField(msg, Infinity);\n        Logger.emit(\n          level,\n          `[req ${sanitizeLogField(String(ctx.requestId))}${trace}] ${prefix}${text}`,\n        );\n      },\n      onProgress: (p) => {\n        this.#tick(p);\n      },\n    };\n  }\n\n  #tick(p: { current: number; total?: number }): void {\n    const tickCtx: ProgressCtx = {\n      ...this.#progressCtx,\n      current: p.current,\n      ...(p.total !== undefined ? { total: p.total } : {}),\n    };\n    this.#progressSession.set({ ...p, message: plainMessage('tick', tickCtx) });\n  }\n\n  private async completeProgress(result: O): Promise<void> {\n    const doneCtx: ProgressCtx = this.def.progressDone\n      ? { ...this.#progressCtx, ...this.def.progressDone(this.parsedArgs, result) }\n      : this.#progressCtx;\n    this.#progressSession.complete(plainMessage('done', doneCtx));\n    await this.#progressSession.flush();\n  }\n\n  private async failProgress(error: unknown): Promise<{ isError: true; content: ContentBlock[] }> {\n    const errMsg = formatUnknownErrorMessage(error);\n    this.#progressSession.fail(plainMessage('fail', { ...this.#progressCtx, error: errMsg }));\n    await this.#progressSession.flush();\n    const errorText = Problem.toText(error, this.def.defaultErrorCode ?? ErrorCode.UNKNOWN);\n    return {\n      content: [{ type: 'text' as const, text: errorText }],\n      isError: true,\n    };\n  }\n\n  /**\n   * Access-grant pre-check (R7/R8/R9). Before `run` touches the filesystem,\n   * ask PathGuard which of the tool's declared paths are out-of-root and\n   * grantable. If any are and this round carries no verified `requestState`,\n   * return `input_required` (nothing is read or written — R7). On retry, the\n   * verified state must bind this grant set (R9); apply each accepted grant for\n   * the session (R8) and proceed. A declined or ungrantable path is left for\n   * `validateAccess` to fail closed during the operation. Returns `undefined`\n   * when no round-trip is needed and any applicable grants have been applied.\n   */\n  private async precheckGrant(): Promise<InputRequiredResult | undefined> {\n    const extract = this.def.accessPaths;\n    if (!extract) return undefined;\n    const paths = extract(this.parsedArgs);\n    if (paths.length === 0) return undefined;\n    const grantDirs = await this.toolCtx.fs.pathGuard.precheckAccess(paths);\n    if (grantDirs.length === 0) return undefined;\n\n    // One grant dir: a single boolean confirm. Multiple: one multi-select\n    // elicitation so the client picks the subset to allow in one round-trip\n    // (N dirs → 1 round-trip, not N). `pendingRoundTrip` still binds\n    // `paths: grantDirs` sorted, so R9 path-binding is unaffected.\n    const multi = grantDirs.length > 1;\n    const round = await pendingRoundTrip(this.toolCtx, {\n      op: 'grant',\n      pending: grantDirs,\n      buildInputs: (dirs) =>\n        multi\n          ? [\n              {\n                key: 'grant',\n                message: 'Grant filesystem access to these directories? Select the ones to allow.',\n                choices: dirs,\n                multi: true,\n              },\n            ]\n          : dirs.map((dir, i) => ({\n              key: confirmKey(i),\n              message: `Grant filesystem access to \"${dir}\"?`,\n            })),\n    });\n    if (round !== undefined) return round;\n    // Apply accepted grants for the session (R8). Declined/missing dirs are\n    // skipped here; their paths fail with ACCESS_DENIED during the operation.\n    //\n    // No list-changed notification follows: a grant widens the allowed roots,\n    // and no resource list reads them. The instructions resource has a fixed\n    // URI, the result template lists the ResourceStore, and the file template\n    // lists nothing at all (see resources.ts). Notifying here only bought the\n    // client a round trip to re-fetch a list that could not have changed.\n    //\n    // `readAcceptedMultiChoice` does NOT validate against the offered choices\n    // (attacker-controlled inputResponses on re-entry). Only grant dirs that\n    // were actually offered by precheckAccess — a value outside grantDirs is\n    // ignored and fails closed in validateAccess. The single-select path reads\n    // `confirmKey(i)` for `grantDirs[i]`, so the isSamePath filter is a no-op\n    // there; it only bites for the multi-select array.\n    const accepted = multi\n      ? (readAcceptedMultiChoice(this.toolCtx.inputResponses, 'grant') ?? [])\n      : grantDirs.filter((_dir, i) =>\n          readAcceptedConfirm(this.toolCtx.inputResponses, confirmKey(i)),\n        );\n    for (const dir of accepted) {\n      if (!grantDirs.some((g) => isSamePath(g, dir))) continue;\n      await this.toolCtx.fs.pathGuard.applyGrant(dir);\n    }\n    return undefined;\n  }\n\n  async execute(): Promise<CallToolResult | InputRequiredResult> {\n    try {\n      // Access-grant pre-check before any filesystem touch (R7/R8/R9). A\n      // grant input_required short-circuits here (progress paused, not\n      // finished); an R9 mismatch throws, which this catch surfaces as an\n      // isError tool result like every other handler failure — not a raw\n      // JSON-RPC error (GRANT-1 impact #2).\n      const grantRequired = await this.precheckGrant();\n      if (grantRequired !== undefined) return grantRequired;\n      const result = await this.def.run(this.parsedArgs, this.toolCtx);\n      // input_required is a return value, not a completed call: the client\n      // retries the same tools/call carrying inputResponses, and this\n      // handler re-enters from the top. Skip the progress \"done\" close and\n      // return it verbatim — progress is paused, not finished.\n      if (isInputRequiredResult(result)) {\n        return result;\n      }\n      await this.completeProgress(result.structured);\n      return buildSuccessResponse(result);\n    } catch (error) {\n      return await this.failProgress(error);\n    } finally {\n      await this.#progressSession.flush();\n    }\n  }\n}\n\nexport function defineTool<I extends z.ZodType, O extends object>(def: ToolDef<I, O>): DefinedTool {\n  // Nothing here depends on `deps`, so it is built once per tool definition\n  // rather than once per `register` — the HTTP leg registers every tool afresh\n  // on each request.\n  // Filesystem tools are closed-world; only mutating tools are destructive.\n  const publishedAnnotations: ToolAnnotations = {\n    readOnlyHint: def.readOnlyHint,\n    openWorldHint: false,\n    ...(def.readOnlyHint ? {} : { destructiveHint: true }),\n  };\n\n  const toolDefShape = {\n    title: def.title,\n    description: def.description,\n    // The Zod schema goes in behind `withSplitArgsRecovery` only: the SDK\n    // validates with it and publishes its own draft-2020-12 conversion in\n    // `tools/list`, which the preprocess step leaves unchanged. The cast only\n    // names the in/out types a generic `ZodType` cannot surface through\n    // `~standard`.\n    inputSchema: withSplitArgsRecovery(def.input) as unknown as StandardSchemaWithJSON<\n      z.input<I>,\n      z.output<I>\n    >,\n    // No `outputSchema`, ever. Publishing one obliges the result to carry\n    // `structuredContent` (clients enforce it), and every tool that authors its\n    // own text ships its metadata under `_meta` instead — see\n    // `buildSuccessResponse`. The two cannot both hold, and the text is what\n    // the model reads. `TOOL-SURFACE-001` pins this for the whole surface.\n    // Result shapes are checked by TypeScript, not unused runtime schemas.\n    annotations: publishedAnnotations,\n  };\n\n  return {\n    name: def.name,\n    readOnlyHint: def.readOnlyHint,\n\n    register(deps: ToolDeps): RegisteredTool {\n      return deps.server.registerTool(def.name, toolDefShape, async (args, ctx) =>\n        new ToolExecutor<I, O>(def.name, toToolCtx(ctx, deps), def, args).execute(),\n      );\n    },\n  };\n}\n"]}
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type {\n  CallToolResult,\n  ClientCapabilities,\n  ContentBlock,\n  InputRequiredResult,\n  McpServer,\n  Notification,\n  RegisteredTool,\n  RequestId,\n  RequestStateAccessor,\n  ServerContext,\n  StandardSchemaWithJSON,\n  ToolAnnotations,\n} from '@modelcontextprotocol/server';\nimport {\n  CLIENT_CAPABILITIES_META_KEY,\n  isInputRequiredResult,\n  TRACEPARENT_META_KEY,\n} from '@modelcontextprotocol/server';\n\nimport type * as z from 'zod/v4';\n\nimport { ErrorCode, formatUnknownErrorMessage, FsError, Problem } from '../core/errors.ts';\nimport type { ProgressCtx } from '../core/fmt.ts';\nimport { plainMessage } from '../core/fmt.ts';\nimport { GuardedFileSystem } from '../core/fs.ts';\nimport {\n  confirmKey,\n  pendingRoundTrip,\n  readAcceptedConfirm,\n  readAcceptedMultiChoice,\n} from '../core/input-required.ts';\nimport { Logger, sanitizeLogField } from '../core/observability.ts';\nimport type { LoggingLevel } from '../core/observability.ts';\nimport { isSamePath } from '../core/path-utils.ts';\nimport type { PathGuard } from '../core/path.ts';\nimport { withSplitArgsRecovery } from '../core/schema.ts';\nimport type { PageSnapshotStore, ResourceStore } from '../core/store.ts';\nimport { jsonBytesOver, MAX_OUTBOUND_RESULT_BYTES } from '../core/util.ts';\nimport { ProgressSession } from './progress.ts';\n\nexport interface ToolCtx {\n  readonly signal: AbortSignal;\n  /** The JSON-RPC id of the `tools/call` this context serves; prefixes every log line. */\n  readonly requestId: RequestId;\n  readonly fs: GuardedFileSystem;\n  readonly pageStore: PageSnapshotStore;\n  readonly resourceStore: ResourceStore;\n  /** Emits a log line to stderr via `Logger.emit`, gated by `FS_LOG_LEVEL`. */\n  readonly log: (level: LoggingLevel, data: unknown, logger?: string) => void;\n  readonly onProgress: (params: { current: number; total?: number }) => void;\n  /**\n   * Multi-round-trip `inputResponses` carried by a retried `tools/call`\n   * (protocol revision 2026-07-28); `undefined` on the first round. Bare,\n   * unvalidated client values — handlers read them through\n   * `readAcceptedConfirm`.\n   */\n  readonly inputResponses?: Record<string, unknown> | undefined;\n  /**\n   * Keys of `inputResponses` entries the SDK dropped on this round because\n   * they were not bare results (the `{ method, result }` wrapper some hosts\n   * send). `pendingRoundTrip` re-issues a confirmation whose key is listed\n   * here once; `describeRefusal` names the cause after that.\n   */\n  readonly droppedInputResponseKeys?: readonly string[] | undefined;\n  /**\n   * Reads the verified multi-round-trip `requestState` for the current round:\n   * the decoded `PendingState` the `requestStateCodec` verified, or `undefined`\n   * when the round carried no state (the first round). `undefined` when no\n   * live request context is available.\n   */\n  readonly requestState?: RequestStateAccessor | undefined;\n  /**\n   * What the connected client declared it can do, or `undefined` when this\n   * connection cannot say. Read by the `input_required` flows: an embedded\n   * elicitation sent to a client that never declared `elicitation` is rejected\n   * by the SDK with `-32021` before it reaches the wire, so the handlers check\n   * first and answer with an actionable tool error instead.\n   *\n   * Two sources, because the eras differ: a legacy connection negotiated them\n   * at `initialize` (`Server.getClientCapabilities()`), a modern one carries\n   * them per request in the `_meta` envelope and never runs `initialize` at\n   * all. `undefined` means \"cannot tell\" — never \"no capabilities\".\n   */\n  readonly clientCapabilities?: ClientCapabilities | undefined;\n  /** The SDK request context this call runs under; `pendingRoundTrip` binds minted state to it. */\n  readonly serverCtx: ServerContext;\n  /** `stdio` alone has a 10 MiB frame limit; `http` on HTTP, unset on the in-memory test pair. */\n  readonly transport?: 'stdio' | 'http' | undefined;\n}\n\nexport interface ToolDeps {\n  readonly server: McpServer;\n  readonly pathGuard: PathGuard;\n  readonly pageStore: PageSnapshotStore;\n  readonly resourceStore: ResourceStore;\n  readonly era?: 'legacy' | 'modern';\n  readonly transport?: 'stdio' | 'http';\n}\n\ninterface RunResult<T> {\n  readonly structured: T;\n  readonly text?: string;\n  readonly resources?: ContentBlock[];\n  /**\n   * The call as a whole failed. Batch tools set it from `isTotalFailure` in\n   * `batch.ts` — every requested item failed — so the executor never has to\n   * know a tool's output shape. Absent or `false` means the call did work.\n   */\n  readonly isError?: boolean;\n}\n\nexport interface ToolDef<I extends z.ZodType, O extends object> {\n  readonly name: string;\n  readonly title: string;\n  readonly description: string;\n  readonly input: I;\n  /** Required: drives both the --read-only gate and published annotations. */\n  readonly readOnlyHint: boolean;\n  readonly timeoutMs?: number;\n  readonly progress?: (args: z.infer<I>) => ProgressCtx;\n  readonly progressDone?: (args: z.infer<I>, result: O) => Partial<ProgressCtx>;\n  readonly defaultErrorCode?: ErrorCode;\n  /**\n   * The filesystem paths this tool will operate on, extracted from its parsed\n   * args. The executor runs an access-grant pre-check over these BEFORE `run`\n   * (R7): any path outside the granted roots yields an `input_required`\n   * round-trip requesting a grant, and nothing is touched until the client\n   * retries with an accepted grant (R8). Omit for tools that do not operate on\n   * caller-supplied filesystem paths.\n   */\n  readonly accessPaths?: (args: z.infer<I>) => readonly string[];\n  readonly run: (args: z.infer<I>, ctx: ToolCtx) => Promise<RunResult<O> | InputRequiredResult>;\n  /**\n   * What the stdio size refusal tells the caller to do instead, for a tool\n   * that knows better than the generic advice (see `refuseOversized`).\n   */\n  readonly oversizeRemedy?: (result: RunResult<O>) => string;\n}\n\nexport interface DefinedTool {\n  readonly name: string;\n  readonly readOnlyHint: boolean;\n\n  register(deps: ToolDeps): RegisteredTool;\n}\n\nfunction toToolCtx(ctx: ServerContext, deps: ToolDeps): Omit<ToolCtx, 'log' | 'onProgress'> {\n  // Envelope first, accessor second — the two eras carry this differently.\n  // A modern request states the capabilities in its own `_meta` envelope; a\n  // legacy connection fixed them at `initialize` and has no envelope at all.\n  // The deprecated accessor still answers for both today (the SDK backfills it\n  // per request from the validated envelope on modern instances), but reading\n  // the envelope directly is the supported path, so it leads: when the accessor\n  // goes, legacy degrades to \"cannot tell\", which fails open to the behavior\n  // that predates this check.\n  //\n  // The cast is the SDK's shipped `RequestMetaEnvelope` declaration collapsing\n  // to `{}` — the reserved keys survive at runtime but not in the .d.ts, so the\n  // key constant cannot index the declared type.\n  const envelope = ctx.mcpReq.envelope as Record<string, unknown> | undefined;\n  const clientCapabilities =\n    (envelope?.[CLIENT_CAPABILITIES_META_KEY] as ClientCapabilities | undefined) ??\n    // eslint-disable-next-line @typescript-eslint/no-deprecated -- the only source of client capabilities on a legacy connection, where no envelope exists.\n    deps.server.server.getClientCapabilities() ??\n    // A legacy instance that never saw `initialize` is the HTTP leg's\n    // per-request serving (`createMcpHandler` with `legacy: 'stateless'`):\n    // there is no return path for a server-to-client request, so read the\n    // client as having declared nothing. The `input_required` flows then\n    // answer with their named workaround instead of the SDK's generic refusal.\n    // sunset(SEP-2577): removal trigger in docs/adr/002-legacy-protocol-paths-sunset.md.\n    (deps.era === 'legacy' ? {} : undefined);\n\n  return {\n    signal: ctx.mcpReq.signal,\n    requestId: ctx.mcpReq.id,\n    fs: new GuardedFileSystem(deps.pathGuard),\n    pageStore: deps.pageStore,\n    resourceStore: deps.resourceStore,\n    inputResponses: ctx.mcpReq.inputResponses,\n    droppedInputResponseKeys: ctx.mcpReq.droppedInputResponseKeys,\n    requestState: ctx.mcpReq.requestState,\n    serverCtx: ctx,\n    ...(clientCapabilities ? { clientCapabilities } : {}),\n    ...(deps.transport ? { transport: deps.transport } : {}),\n  };\n}\n\n/**\n * Claude Code — and any client that treats `structuredContent` as the canonical\n * model view — discards the `text` blocks when `structuredContent` is present,\n * showing the model `JSON.stringify(structuredContent)` instead. A tool that\n * authored a text result (list's ASCII tree, read's file) meant that text for\n * the model, so it ships its metadata under `_meta`, which no client renders in\n * place of the content. Tools with no `text` keep `structuredContent`: the JSON\n * *is* their model-facing view.\n */\nfunction buildSuccessResponse<O extends object>(result: RunResult<O>): CallToolResult {\n  const hasText = result.text !== undefined;\n  const text = result.text ?? JSON.stringify(result.structured);\n  const content: ContentBlock[] = [{ type: 'text' as const, text }, ...(result.resources ?? [])];\n  return {\n    content,\n    ...(hasText // Result interfaces have named fields; the SDK metadata requires an index signature.\n      ? { _meta: result.structured as Record<string, unknown> }\n      : { structuredContent: result.structured }),\n    ...(result.isError ? { isError: true } : {}),\n  };\n}\n\nclass ToolExecutor<I extends z.ZodType, O extends object> {\n  readonly signal: AbortSignal;\n  private readonly def: ToolDef<I, O>;\n  private readonly parsedArgs: z.infer<I>;\n  private readonly toolCtx: ToolCtx;\n\n  readonly #progressCtx: ProgressCtx;\n  readonly #progressSession: ProgressSession;\n\n  constructor(\n    toolName: string,\n    ctx: Omit<ToolCtx, 'log' | 'onProgress'>,\n    def: ToolDef<I, O>,\n    parsedArgs: z.infer<I>,\n  ) {\n    this.def = def;\n    this.parsedArgs = parsedArgs;\n    this.signal = def.timeoutMs\n      ? AbortSignal.any([ctx.signal, AbortSignal.timeout(def.timeoutMs)])\n      : ctx.signal;\n    this.#progressCtx = def.progress ? def.progress(parsedArgs) : { label: def.title };\n    const { mcpReq } = ctx.serverCtx;\n    const token = mcpReq._meta?.progressToken;\n    const notify = async (notification: Notification): Promise<void> => mcpReq.notify(notification);\n    this.#progressSession = new ProgressSession({\n      label: this.#progressCtx.label,\n      ...(token !== undefined ? { sink: { toolName, token, notify } } : {}),\n    });\n    const traceparent = mcpReq._meta?.[TRACEPARENT_META_KEY];\n    this.toolCtx = {\n      ...ctx,\n      signal: this.signal,\n      // Per-call views, so a response refused after `run` can take back the\n      // cached result and page snapshot behind a link or cursor it never sent.\n      pageStore: ctx.pageStore.forCall(),\n      resourceStore: ctx.resourceStore.forCall(),\n      log: (level: LoggingLevel, data: unknown, logger?: string) => {\n        const msg = typeof data === 'string' ? data : String(data);\n        // `[req <id>]` first so one grep finds every line of one call; the\n        // traceparent rides along only when the client sent one. Both are\n        // client-supplied, so they pass through `sanitizeLogField`: a control\n        // character in a JSON-RPC id or a traceparent would forge log lines.\n        // The message is flattened too (uncapped): it can carry a resolved\n        // path or OS error text, and input schemas reject CR/LF but not the\n        // Unicode line separators.\n        const trace = typeof traceparent === 'string' ? ` ${sanitizeLogField(traceparent)}` : '';\n        const prefix = logger ? `[${logger}] ` : '';\n        const text = sanitizeLogField(msg, Infinity);\n        Logger.emit(\n          level,\n          `[req ${sanitizeLogField(String(ctx.requestId))}${trace}] ${prefix}${text}`,\n        );\n      },\n      onProgress: (p) => {\n        this.#tick(p);\n      },\n    };\n  }\n\n  #tick(p: { current: number; total?: number }): void {\n    const tickCtx: ProgressCtx = {\n      ...this.#progressCtx,\n      current: p.current,\n      ...(p.total !== undefined ? { total: p.total } : {}),\n    };\n    this.#progressSession.set({ ...p, message: plainMessage('tick', tickCtx) });\n  }\n\n  private completeProgress(result: O): void {\n    const doneCtx: ProgressCtx = this.def.progressDone\n      ? { ...this.#progressCtx, ...this.def.progressDone(this.parsedArgs, result) }\n      : this.#progressCtx;\n    this.#progressSession.complete(plainMessage('done', doneCtx));\n  }\n\n  private failProgress(error: unknown): { isError: true; content: ContentBlock[] } {\n    const errMsg = formatUnknownErrorMessage(error);\n    this.#progressSession.fail(plainMessage('fail', { ...this.#progressCtx, error: errMsg }));\n    const errorText = Problem.toText(error, this.def.defaultErrorCode ?? ErrorCode.UNKNOWN);\n    return {\n      content: [{ type: 'text' as const, text: errorText }],\n      isError: true,\n    };\n  }\n\n  /**\n   * Access-grant pre-check (R7/R8/R9). Before `run` touches the filesystem,\n   * ask PathGuard which of the tool's declared paths are out-of-root and\n   * grantable. If any are and this round carries no verified `requestState`,\n   * return `input_required` (nothing is read or written — R7). On retry, the\n   * verified state must bind this grant set (R9); apply each accepted grant for\n   * the session (R8) and proceed. A declined or ungrantable path is left for\n   * `validateAccess` to fail closed during the operation. Returns `undefined`\n   * when no round-trip is needed and any applicable grants have been applied.\n   */\n  private async precheckGrant(): Promise<InputRequiredResult | undefined> {\n    const extract = this.def.accessPaths;\n    if (!extract) return undefined;\n    const paths = extract(this.parsedArgs);\n    if (paths.length === 0) return undefined;\n    const grantDirs = await this.toolCtx.fs.pathGuard.precheckAccess(paths);\n    if (grantDirs.length === 0) return undefined;\n\n    // One grant dir: a single boolean confirm. Multiple: one multi-select\n    // elicitation so the client picks the subset to allow in one round-trip\n    // (N dirs → 1 round-trip, not N). `pendingRoundTrip` still binds\n    // `paths: grantDirs` sorted, so R9 path-binding is unaffected.\n    const multi = grantDirs.length > 1;\n    const round = await pendingRoundTrip(this.toolCtx, {\n      op: 'grant',\n      pending: grantDirs,\n      buildInputs: (dirs) =>\n        multi\n          ? [\n              {\n                key: 'grant',\n                message: 'Grant filesystem access to these directories? Select the ones to allow.',\n                choices: dirs,\n                multi: true,\n              },\n            ]\n          : dirs.map((dir, i) => ({\n              key: confirmKey(i),\n              message: `Grant filesystem access to \"${dir}\"?`,\n            })),\n    });\n    if (round !== undefined) return round;\n    // Apply accepted grants for the session (R8). Declined/missing dirs are\n    // skipped here; their paths fail with ACCESS_DENIED during the operation.\n    //\n    // No list-changed notification follows: a grant widens the allowed roots,\n    // and no resource list reads them. The instructions resource has a fixed\n    // URI, the result template lists the ResourceStore, and the file template\n    // lists nothing at all (see resources.ts). Notifying here only bought the\n    // client a round trip to re-fetch a list that could not have changed.\n    //\n    // `readAcceptedMultiChoice` does NOT validate against the offered choices\n    // (attacker-controlled inputResponses on re-entry). Only grant dirs that\n    // were actually offered by precheckAccess — a value outside grantDirs is\n    // ignored and fails closed in validateAccess. The single-select path reads\n    // `confirmKey(i)` for `grantDirs[i]`, so the isSamePath filter is a no-op\n    // there; it only bites for the multi-select array.\n    const accepted = multi\n      ? (readAcceptedMultiChoice(this.toolCtx.inputResponses, 'grant') ?? [])\n      : grantDirs.filter((_dir, i) =>\n          readAcceptedConfirm(this.toolCtx.inputResponses, confirmKey(i)),\n        );\n    for (const dir of accepted) {\n      if (!grantDirs.some((g) => isSamePath(g, dir))) continue;\n      await this.toolCtx.fs.pathGuard.applyGrant(dir);\n    }\n    return undefined;\n  }\n\n  /**\n   * stdio's SDK reader drops the connection on a message past 10 MiB, so a\n   * response that would overflow it becomes TOO_LARGE instead. Only a call\n   * that changed nothing can be refused after `run` — a read-only tool, or a\n   * dry run (every tool with `dryRun` writes nothing under it); a mutation may\n   * already have committed. The whole encoded response counts, duplicated\n   * metadata and escaping included; the ceiling leaves room for the envelope.\n   */\n  private refuseOversized(result: RunResult<O>, response: CallToolResult): void {\n    if (this.toolCtx.transport !== 'stdio') return;\n    const dryRun = (this.parsedArgs as { dryRun?: unknown }).dryRun === true;\n    if (!this.def.readOnlyHint && !dryRun) return;\n    const encodedBytes = jsonBytesOver(response, MAX_OUTBOUND_RESULT_BYTES);\n    if (encodedBytes === undefined) return;\n    // The client never receives the link or cursor these back, so they would\n    // only push live entries out of the stores' caps.\n    this.toolCtx.resourceStore.discard();\n    this.toolCtx.pageStore.discard();\n    const remedy =\n      this.def.oversizeRemedy?.(result) ??\n      (dryRun\n        ? 'Nothing was written. Preview fewer files or a smaller file per call, or connect over HTTP.'\n        : 'Reduce the requested output or connect over HTTP.');\n    // The remedy stands in for TOO_LARGE's default head/tail advice, which\n    // fits neither media nor a dry run.\n    throw new FsError(\n      ErrorCode.TOO_LARGE,\n      `${this.def.name} result too large to return (${String(encodedBytes)} bytes once JSON-encoded, over the ${String(MAX_OUTBOUND_RESULT_BYTES)}-byte stdio message limit).`,\n      undefined,\n      undefined,\n      remedy,\n    );\n  }\n\n  async execute(): Promise<CallToolResult | InputRequiredResult> {\n    try {\n      // Access-grant pre-check before any filesystem touch (R7/R8/R9). A\n      // grant input_required short-circuits here (progress paused, not\n      // finished); an R9 mismatch throws, which this catch surfaces as an\n      // isError tool result like every other handler failure — not a raw\n      // JSON-RPC error (GRANT-1 impact #2).\n      const grantRequired = await this.precheckGrant();\n      if (grantRequired !== undefined) return grantRequired;\n      const result = await this.def.run(this.parsedArgs, this.toolCtx);\n      // input_required is a return value, not a completed call: the client\n      // retries the same tools/call carrying inputResponses, and this\n      // handler re-enters from the top. Skip the progress \"done\" close and\n      // return it verbatim — progress is paused, not finished.\n      if (isInputRequiredResult(result)) {\n        return result;\n      }\n      const response = buildSuccessResponse(result);\n      this.refuseOversized(result, response);\n      this.completeProgress(result.structured);\n      return response;\n    } catch (error) {\n      return this.failProgress(error);\n    } finally {\n      await this.#progressSession.flush();\n    }\n  }\n}\n\nexport function defineTool<I extends z.ZodType, O extends object>(def: ToolDef<I, O>): DefinedTool {\n  // Nothing here depends on `deps`, so it is built once per tool definition\n  // rather than once per `register` — the HTTP leg registers every tool afresh\n  // on each request.\n  // Filesystem tools are closed-world; only mutating tools are destructive.\n  const publishedAnnotations: ToolAnnotations = {\n    readOnlyHint: def.readOnlyHint,\n    openWorldHint: false,\n    ...(def.readOnlyHint ? {} : { destructiveHint: true }),\n  };\n\n  const toolDefShape = {\n    title: def.title,\n    description: def.description,\n    // The Zod schema goes in behind `withSplitArgsRecovery` only: the SDK\n    // validates with it and publishes its own draft-2020-12 conversion in\n    // `tools/list`, which the preprocess step leaves unchanged. The cast only\n    // names the in/out types a generic `ZodType` cannot surface through\n    // `~standard`.\n    inputSchema: withSplitArgsRecovery(def.input) as unknown as StandardSchemaWithJSON<\n      z.input<I>,\n      z.output<I>\n    >,\n    // No `outputSchema`, ever. Publishing one obliges the result to carry\n    // `structuredContent` (clients enforce it), and every tool that authors its\n    // own text ships its metadata under `_meta` instead — see\n    // `buildSuccessResponse`. The two cannot both hold, and the text is what\n    // the model reads. `TOOL-SURFACE-001` pins this for the whole surface.\n    // Result shapes are checked by TypeScript, not unused runtime schemas.\n    annotations: publishedAnnotations,\n  };\n\n  return {\n    name: def.name,\n    readOnlyHint: def.readOnlyHint,\n\n    register(deps: ToolDeps): RegisteredTool {\n      return deps.server.registerTool(def.name, toolDefShape, async (args, ctx) =>\n        new ToolExecutor<I, O>(def.name, toToolCtx(ctx, deps), def, args).execute(),\n      );\n    },\n  };\n}\n"]}

package/dist/tools/delete.d.ts.map

@@ -1 +1 @@
-{"version":3,"file":"delete.d.ts","sourceRoot":"","sources":["../../src/tools/delete.ts"],"names":[],"mappings":"AA0WA,eAAO,MAAM,MAAM,mCA4CjB,CAAC"}
+{"version":3,"file":"delete.d.ts","sourceRoot":"","sources":["../../src/tools/delete.ts"],"names":[],"mappings":"AAiYA,eAAO,MAAM,MAAM,mCA4CjB,CAAC"}

package/dist/tools/delete.js

@@ -4,7 +4,7 @@ import * as z from 'zod/v4';
 import { processInParallel } from "../core/concurrency.js";
 import { ErrorCode, FsError, isFsError, isNodeError, isNotFoundErrno, Problem, } from "../core/errors.js";
 import { joinRoster, pathLabel } from "../core/fmt.js";
-import { confirmKey, describeRefusal, pendingRoundTrip, readAcceptedChoice, } from "../core/input-required.js";
+import { confirmKey, pendingRoundTrip, readPendingVerdict, } from "../core/input-required.js";
 import { resolveEntryType } from "../core/path-utils.js";
 import { defaultFalseBoolean, RequiredPath } from "../core/schema.js";
 import { PARALLEL_CONCURRENCY } from "../core/util.js";
@@ -91,20 +91,13 @@ async function planPath(inputPath, args, fs) {
             return { status: 'fail', failure: toDeleteFailure(inputPath, error) };
         }
     }
-    const pending = hasChildren;
-    return { status: 'plan', plan: { inputPath, validPath, itemType, firstStats, pending } };
-}
-async function performDeletion(validPath, args, isDirectory, fsOps) {
-    if (isDirectory && !args.recursive) {
-        await fsOps.rmdir(validPath);
-    }
-    else {
-        await fsOps.rm(validPath, {
-            recursive: args.recursive,
-            force: args.ignoreIfNotExists,
-        });
-    }
+    return {
+        status: 'plan',
+        plan: { inputPath, validPath, itemType, firstStats, pending: hasChildren },
+    };
 }
+/** Same filesystem object. birthtimeMs joins dev/ino, which read 0 on some non-POSIX drivers. */
+const sameIdentity = (a, b) => a.dev === b.dev && a.ino === b.ino && a.birthtimeMs === b.birthtimeMs;
 /**
  * Phase 2 (mutation): TOCTOU re-stat against the plan's first stat, then
  * delete. A type or identity change across the confirmation gap fails closed
@@ -127,9 +120,7 @@ async function finalizeDeletion(plan, args, ctx) {
     // the type but changes dev/ino/birthtimeMs. birthtimeMs is the primary
     // cross-platform signal — dev/ino can read 0 on some non-POSIX drivers — so
     // combine all three rather than trusting dev/ino alone.
-    const identityChanged = plan.firstStats.stats.dev !== currentStats.stats.dev ||
-        plan.firstStats.stats.ino !== currentStats.stats.ino ||
-        plan.firstStats.stats.birthtimeMs !== currentStats.stats.birthtimeMs;
+    const identityChanged = !sameIdentity(plan.firstStats.stats, currentStats.stats);
     if (plan.itemType !== 'other' && (currentItemType !== plan.itemType || identityChanged)) {
         return {
             failure: {
@@ -139,7 +130,10 @@ async function finalizeDeletion(plan, args, ctx) {
         };
     }
     try {
-        await performDeletion(plan.validPath, args, currentStats.stats.isDirectory(), ctx.fs);
+        if (currentStats.stats.isDirectory() && !args.recursive)
+            await ctx.fs.rmdir(plan.validPath);
+        else
+            await ctx.fs.rm(plan.validPath, { recursive: args.recursive, force: args.ignoreIfNotExists });
     }
     catch (error) {
         return { failure: toDeleteFailure(plan.inputPath, error) };
@@ -153,18 +147,28 @@ async function finalizeDeletion(plan, args, ctx) {
  * `CANCELLED` for that path (R3 proceed, R4/R5 cancelled). A non-pending path
  * deletes directly (R14: non-pending items proceed alongside accepted ones).
  */
-async function executePlan(plan, args, ctx, pendingSorted) {
+async function executePlan(plan, args, ctx, pendingSorted, confirmationState) {
     if (plan.pending) {
-        const key = confirmKey(pendingSorted.indexOf(plan.validPath));
-        const choice = readAcceptedChoice(ctx.inputResponses, key);
-        if (choice === 'skip') {
+        const verdict = readPendingVerdict(ctx, pendingSorted, plan.validPath, 'delete');
+        if (verdict === 'skipped') {
             return { skipped: true, path: plan.validPath };
         }
-        if (choice !== 'delete') {
+        if (verdict !== 'accepted') {
+            return {
+                failure: {
+                    path: plan.validPath,
+                    error: Problem.cancelled(`Delete cancelled: confirmation was ${verdict.refused}`, {
+                        path: plan.validPath,
+                    }),
+                },
+            };
+        }
+        const identity = confirmationState?.deleteIdentities?.find((entry) => entry.path === plan.validPath);
+        if (identity?.itemType !== plan.itemType || !sameIdentity(identity, plan.firstStats.stats)) {
             return {
                 failure: {
                     path: plan.validPath,
-                    error: Problem.cancelled(`Delete cancelled: confirmation was ${describeRefusal(ctx, key)}`, { path: plan.validPath }),
+                    error: Problem.invalidInput('Delete failed: item identity changed or is missing from the confirmation.', { path: plan.validPath }),
                 },
             };
         }
@@ -179,13 +183,19 @@ async function handleDelete(args, ctx) {
     const planned = await processInParallel(paths, (inputPath) => planPath(inputPath, args, ctx.fs), PARALLEL_CONCURRENCY, ctx.signal);
     const out = new Array(paths.length).fill(undefined);
     const plans = [];
+    const confirmationState = ctx.requestState?.();
+    const previouslyPendingPaths = new Set(confirmationState?.op === 'delete' ? confirmationState.paths : []);
     for (const { index, value: r } of planned.results) {
         if (r.status === 'fail')
             out[index] = { path: r.failure.path, error: r.failure.error };
         else if (r.status === 'noop')
             out[index] = { path: r.deleted, value: { deleted: true } };
-        else
+        else {
+            // Emptying a directory while its prompt is open must not discard the
+            // answer. Keep that path pending so the verified retry still honors skip.
+            r.plan.pending ||= previouslyPendingPaths.has(r.plan.validPath);
             plans.push({ plan: r.plan, index });
+        }
     }
     for (const { index, error } of planned.errors) {
         out[index] = {
@@ -201,13 +211,22 @@ async function handleDelete(args, ctx) {
     const pendingSorted = [
         ...new Set(plans.filter((p) => p.plan.pending).map((p) => p.plan.validPath)),
     ].sort();
-    if (pendingSorted.length > 0) {
+    // With no actionable plans, preserve per-path NOT_FOUND / ignoreIfNotExists
+    // results. Otherwise even an empty pending set must be checked before an
+    // unrelated non-pending batch entry can mutate.
+    if (pendingSorted.length > 0 || (confirmationState?.op === 'delete' && plans.length > 0)) {
         // Round 1 returns input_required (atomic — R14: nothing deleted yet, not
         // even the non-pending items in the same call); a retry whose verified
         // state does not bind this pending set throws (R9) via `pendingRoundTrip`.
         const round = await pendingRoundTrip(ctx, {
             op: 'delete',
             pending: pendingSorted,
+            deleteIdentities: plans
+                .filter(({ plan }) => plan.pending)
+                .map(({ plan }) => {
+                const { dev, ino, birthtimeMs } = plan.firstStats.stats;
+                return { path: plan.validPath, itemType: plan.itemType, dev, ino, birthtimeMs };
+            }),
             buildInputs: (ps) => ps.map((p, i) => ({
                 key: confirmKey(i),
                 message: `Permanently delete "${p}" and all its contents? This cannot be undone.`,
@@ -218,7 +237,7 @@ async function handleDelete(args, ctx) {
             return round;
     }
     // Phase 2 (mutation): execute deletions for every planned path.
-    const executed = await processInParallel(plans, ({ plan }) => executePlan(plan, args, ctx, pendingSorted), PARALLEL_CONCURRENCY, ctx.signal);
+    const executed = await processInParallel(plans, ({ plan }) => executePlan(plan, args, ctx, pendingSorted, confirmationState), PARALLEL_CONCURRENCY, ctx.signal);
     for (const { index, value: r } of executed.results) {
         const slot = plans[index]?.index;
         if (slot === undefined)