@j0hanz/filesystem-mcp 2.3.0 → 2.4.1

package/dist/tools/define.js

@@ -1,12 +1,11 @@
-import { CLIENT_CAPABILITIES_META_KEY, fromJsonSchema, isInputRequiredResult, TRACEPARENT_META_KEY, } from '@modelcontextprotocol/server';
-import * as z from 'zod/v4';
-import { ErrorCode, formatUnknownErrorMessage, Problem } from '../core/errors.js';
-import { plainMessage } from '../core/fmt.js';
-import { GuardedFileSystem } from '../core/fs.js';
-import { confirmKey, multiSelectInput, pendingRoundTrip, readAcceptedConfirm, readAcceptedMultiChoice, } from '../core/input-required.js';
-import { Logger, sanitizeLogField } from '../core/observability.js';
-import { isSamePath } from '../core/path-utils.js';
-import { McpProgressSink, ProgressSession } from './progress.js';
+import { CLIENT_CAPABILITIES_META_KEY, isInputRequiredResult, TRACEPARENT_META_KEY, } from '@modelcontextprotocol/server';
+import { ErrorCode, formatUnknownErrorMessage, Problem } from "../core/errors.js";
+import { plainMessage } from "../core/fmt.js";
+import { GuardedFileSystem } from "../core/fs.js";
+import { confirmKey, pendingRoundTrip, readAcceptedConfirm, readAcceptedMultiChoice, } from "../core/input-required.js";
+import { Logger, sanitizeLogField } from "../core/observability.js";
+import { isSamePath } from "../core/path-utils.js";
+import { ProgressSession } from "./progress.js";
 function toToolCtx(ctx, deps) {
     // Envelope first, accessor second — the two eras carry this differently.
     // A modern request states the capabilities in its own `_meta` envelope; a
@@ -44,6 +43,7 @@ function toToolCtx(ctx, deps) {
         sendNotification: async (notification) => ctx.mcpReq.notify(notification),
         inputResponses: ctx.mcpReq.inputResponses,
         requestState: ctx.mcpReq.requestState,
+        serverCtx: ctx,
         ...(clientCapabilities ? { clientCapabilities } : {}),
     };
 }
@@ -79,7 +79,6 @@ class ToolExecutor {
     parsedArgs;
     toolCtx;
     #progressCtx;
-    #mcpSink;
     #progressSession;
     constructor(toolName, ctx, def, parsedArgs) {
         this.def = def;
@@ -89,14 +88,10 @@ class ToolExecutor {
             : ctx.signal;
         this.#progressCtx = def.progress ? def.progress(parsedArgs) : { label: def.title };
         const token = ctx._meta?.progressToken;
-        if (token !== undefined && ctx.sendNotification !== undefined) {
-            this.#mcpSink = new McpProgressSink(toolName, token, ctx.sendNotification);
-        }
-        const isTest = process.env['NODE_ENV'] === 'test' || process.execArgv.includes('--test');
+        const notify = ctx.sendNotification;
         this.#progressSession = new ProgressSession({
             label: this.#progressCtx.label,
-            ...(this.#mcpSink ? { sink: this.#mcpSink } : {}),
-            ...(isTest ? { rateLimitMs: 0 } : {}),
+            ...(token !== undefined && notify !== undefined ? { sink: { toolName, token, notify } } : {}),
         });
         this.toolCtx = {
             ...ctx,
@@ -128,22 +123,17 @@ class ToolExecutor {
         };
         this.#progressSession.set({ ...p, message: plainMessage('tick', tickCtx) });
     }
-    async #flushProgress() {
-        if (this.#mcpSink)
-            await this.#mcpSink.flush();
-    }
     async completeProgress(result) {
         const doneCtx = this.def.progressDone
             ? { ...this.#progressCtx, ...this.def.progressDone(this.parsedArgs, result) }
             : this.#progressCtx;
         this.#progressSession.complete(plainMessage('done', doneCtx));
-        await this.#flushProgress();
+        await this.#progressSession.flush();
     }
     async failProgress(error) {
         const errMsg = formatUnknownErrorMessage(error);
-        const message = plainMessage('fail', { ...this.#progressCtx, error: errMsg });
-        this.#progressSession.fail(error, message);
-        await this.#flushProgress();
+        this.#progressSession.fail(plainMessage('fail', { ...this.#progressCtx, error: errMsg }));
+        await this.#progressSession.flush();
         const { text: errorText } = Problem.toText(error, this.def.defaultErrorCode ?? ErrorCode.UNKNOWN);
         return {
             content: [{ type: 'text', text: errorText }],
@@ -180,9 +170,15 @@ class ToolExecutor {
             pending: grantDirs,
             requestState: this.toolCtx.requestState,
             clientCapabilities: this.toolCtx.clientCapabilities,
+            serverCtx: this.toolCtx.serverCtx,
             buildInputs: (dirs) => multi
                 ? [
-                    multiSelectInput('grant', 'Grant filesystem access to these directories? Select the ones to allow.', dirs),
+                    {
+                        key: 'grant',
+                        message: 'Grant filesystem access to these directories? Select the ones to allow.',
+                        choices: dirs,
+                        multi: true,
+                    },
                 ]
                 : dirs.map((dir, i) => ({
                     key: confirmKey(i),
@@ -241,76 +237,11 @@ class ToolExecutor {
             return await this.failProgress(error);
         }
         finally {
-            await this.#flushProgress();
+            await this.#progressSession.flush();
         }
     }
 }
-/**
- * Validate with Zod while publishing the precomputed JSON Schema: clients get
- * draft-2020-12, handlers get Zod's coercions, defaults and error messages.
- *
- * Each validator instance is built for exactly one schema and handed straight
- * to `fromJsonSchema(thatSchema, ...)`, which calls `getValidator` once with
- * the same schema — so the argument is redundant here and deliberately ignored.
- * Reusing one instance across schemas would silently validate against `schema`.
- */
-function zodJsonSchemaValidator(schema) {
-    return {
-        getValidator() {
-            return (input) => {
-                const result = schema.safeParse(input);
-                if (result.success) {
-                    return {
-                        valid: true,
-                        data: result.data,
-                        errorMessage: undefined,
-                    };
-                }
-                return {
-                    valid: false,
-                    data: undefined,
-                    errorMessage: z.prettifyError(result.error),
-                };
-            };
-        },
-    };
-}
-/**
- * Generate the wire copy of a schema for `tools/list`. The Zod schema keeps
- * every constraint for runtime validation; the `override` pass only trims what
- * the wire copy costs every client at session start:
- *
- * - `$schema` and `title` carry no information the host uses.
- * - `maximum: Number.MAX_SAFE_INTEGER` is zod's int() artifact, not a bound.
- * - `examples` is dropped in both directions: on output it describes a field the
- *   server itself fills in, and on input every description that carried one
- *   already spells the same example out inline, so the keyword paid twice.
- *
- * Output `description`s are NOT dropped. They were, and the result was a wire
- * contract the model had to guess at: `delete` returns `path` XOR `paths`,
- * `edit.diff` appears only under dryRun, `read.value` has no required field at
- * all. None of that is inferable from types alone.
- *
- * No shared subschema carries a `.meta({ id })`, so zod inlines every one of
- * them and the emitted document has no `$defs`/`$ref` to dereference.
- */
-function toDraft202012(schema, io) {
-    const generated = z.toJSONSchema(schema, {
-        target: 'draft-2020-12',
-        io,
-        override: ({ jsonSchema }) => {
-            const node = jsonSchema;
-            delete node['title'];
-            if (node['maximum'] === Number.MAX_SAFE_INTEGER)
-                delete node['maximum'];
-            delete node['examples'];
-        },
-    });
-    delete generated['$schema'];
-    return generated;
-}
 export function defineTool(def) {
-    const inputJsonSchema = toDraft202012(def.input, 'input');
     // Nothing here depends on `deps`, so it is built once per tool definition
     // rather than once per `register` — the HTTP leg registers every tool afresh
     // on each request.
@@ -329,7 +260,10 @@ export function defineTool(def) {
     const toolDefShape = {
         title: def.title,
         description: def.description,
-        inputSchema: fromJsonSchema(inputJsonSchema, zodJsonSchemaValidator(def.input)),
+        // The Zod schema goes in as-is: the SDK validates with it and publishes its
+        // own draft-2020-12 conversion in `tools/list`. The cast only names the
+        // in/out types a generic `ZodType` cannot surface through `~standard`.
+        inputSchema: def.input,
         // No `outputSchema`, ever. Publishing one obliges the result to carry
         // `structuredContent` (clients enforce it), and every tool that authors its
         // own text ships its metadata under `_meta` instead — see

package/dist/tools/define.js.map

@@ -1 +1 @@
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type {\n  CallToolResult,\n  ClientCapabilities,\n  ContentBlock,\n  InputRequiredResult,\n  JsonSchemaType,\n  JsonSchemaValidator,\n  jsonSchemaValidator,\n  McpServer,\n  Notification,\n  RegisteredTool,\n  RequestId,\n  RequestMeta,\n  RequestStateAccessor,\n  ServerContext,\n  ToolAnnotations,\n} from '@modelcontextprotocol/server';\nimport {\n  CLIENT_CAPABILITIES_META_KEY,\n  fromJsonSchema,\n  isInputRequiredResult,\n  TRACEPARENT_META_KEY,\n} from '@modelcontextprotocol/server';\n\nimport * as z from 'zod/v4';\n\nimport { ErrorCode, formatUnknownErrorMessage, Problem } from '../core/errors.js';\nimport type { ProgressCtx } from '../core/fmt.js';\nimport { plainMessage } from '../core/fmt.js';\nimport { GuardedFileSystem } from '../core/fs.js';\nimport {\n  confirmKey,\n  multiSelectInput,\n  pendingRoundTrip,\n  readAcceptedConfirm,\n  readAcceptedMultiChoice,\n} from '../core/input-required.js';\nimport { Logger, sanitizeLogField } from '../core/observability.js';\nimport type { LoggingLevel } from '../core/observability.js';\nimport type { PageSnapshotStore } from '../core/page-store.js';\nimport { isSamePath } from '../core/path-utils.js';\nimport type { PathGuard } from '../core/path.js';\nimport type { ResourceStore } from '../core/store.js';\nimport { McpProgressSink, ProgressSession } from './progress.js';\n\nexport interface ToolCtx {\n  readonly signal: AbortSignal;\n  readonly _meta?: RequestMeta | undefined;\n  /** The JSON-RPC id of the `tools/call` this context serves; prefixes every log line. */\n  readonly requestId: RequestId;\n  /** W3C trace context the client put in `_meta`, when it did; rides the log prefix. */\n  readonly traceparent?: string | undefined;\n  readonly fs: GuardedFileSystem;\n  readonly pageStore: PageSnapshotStore;\n  readonly resourceStore: ResourceStore | undefined;\n  /** Emits a log line to stderr via `Logger.emit`, gated by `LOG_LEVEL`. */\n  readonly log?: (level: LoggingLevel, data: unknown, logger?: string) => void;\n  readonly sendNotification?: (notification: Notification) => Promise<void>;\n  readonly onProgress?: (params: { current: number; total?: number }) => void;\n  /**\n   * Multi-round-trip `inputResponses` carried by a retried `tools/call`\n   * (protocol revision 2026-07-28); `undefined` on the first round. Bare,\n   * unvalidated client values — handlers read them through\n   * `readAcceptedConfirm`.\n   */\n  readonly inputResponses?: Record<string, unknown> | undefined;\n  /**\n   * Reads the verified multi-round-trip `requestState` for the current round:\n   * the decoded `PendingState` the `requestStateCodec` verified, or `undefined`\n   * when the round carried no state (the first round). `undefined` when no\n   * live request context is available.\n   */\n  readonly requestState?: RequestStateAccessor | undefined;\n  /**\n   * What the connected client declared it can do, or `undefined` when this\n   * connection cannot say. Read by the `input_required` flows: an embedded\n   * elicitation sent to a client that never declared `elicitation` is rejected\n   * by the SDK with `-32021` before it reaches the wire, so the handlers check\n   * first and answer with an actionable tool error instead.\n   *\n   * Two sources, because the eras differ: a legacy connection negotiated them\n   * at `initialize` (`Server.getClientCapabilities()`), a modern one carries\n   * them per request in the `_meta` envelope and never runs `initialize` at\n   * all. `undefined` means \"cannot tell\" — never \"no capabilities\".\n   */\n  readonly clientCapabilities?: ClientCapabilities | undefined;\n}\n\ninterface ToolDeps {\n  readonly server: McpServer;\n  readonly pathGuard: PathGuard;\n  readonly pageStore: PageSnapshotStore;\n  readonly resourceStore: ResourceStore | undefined;\n  readonly era?: 'legacy' | 'modern';\n}\n\ninterface RunResult<T> {\n  readonly structured: T;\n  readonly text?: string;\n  readonly resources?: ContentBlock[];\n  /**\n   * The call as a whole failed. Batch tools set it from `isTotalFailure` in\n   * `batch.ts` — every requested item failed — so the executor never has to\n   * know a tool's output shape. Absent or `false` means the call did work.\n   */\n  readonly isError?: boolean;\n}\n\n/**\n * `ToolAnnotations` with `readOnlyHint` required. It is optional in the SDK, but\n * MUTATING_TOOL_NAMES derives the `--read-only` gate from it, so a tool that\n * forgets it must be a compile error rather than a silent reclassification.\n */\ntype DeclaredAnnotations = ToolAnnotations & { readonly readOnlyHint: boolean };\n\nexport interface ToolDef<I extends z.ZodType, O extends z.ZodType> {\n  readonly name: string;\n  readonly title: string;\n  readonly description: string;\n  readonly input: I;\n  readonly output: O;\n  readonly annotations: DeclaredAnnotations;\n  readonly timeoutMs?: number;\n  readonly progress?: (args: z.infer<I>) => ProgressCtx;\n  readonly progressDone?: (args: z.infer<I>, result: z.infer<O>) => Partial<ProgressCtx>;\n  readonly defaultErrorCode?: ErrorCode;\n  /**\n   * The filesystem paths this tool will operate on, extracted from its parsed\n   * args. The executor runs an access-grant pre-check over these BEFORE `run`\n   * (R7): any path outside the granted roots yields an `input_required`\n   * round-trip requesting a grant, and nothing is touched until the client\n   * retries with an accepted grant (R8). Omit for tools that do not operate on\n   * caller-supplied filesystem paths.\n   */\n  readonly accessPaths?: (args: z.infer<I>) => readonly string[];\n  readonly run: (\n    args: z.infer<I>,\n    ctx: ToolCtx,\n  ) => Promise<RunResult<z.infer<O>> | InputRequiredResult>;\n}\n\nexport interface DefinedTool {\n  readonly name: string;\n  readonly annotations: DeclaredAnnotations;\n\n  register(deps: ToolDeps): RegisteredTool;\n}\n\nfunction toToolCtx(\n  ctx: ServerContext,\n  deps: Pick<ToolDeps, 'pathGuard' | 'pageStore' | 'resourceStore' | 'server' | 'era'>,\n): ToolCtx {\n  // Envelope first, accessor second — the two eras carry this differently.\n  // A modern request states the capabilities in its own `_meta` envelope; a\n  // legacy connection fixed them at `initialize` and has no envelope at all.\n  // The deprecated accessor still answers for both today (the SDK backfills it\n  // per request from the validated envelope on modern instances), but reading\n  // the envelope directly is the supported path, so it leads: when the accessor\n  // goes, legacy degrades to \"cannot tell\", which fails open to the behavior\n  // that predates this check.\n  //\n  // The cast is the SDK's shipped `RequestMetaEnvelope` declaration collapsing\n  // to `{}` — the reserved keys survive at runtime but not in the .d.ts, so the\n  // key constant cannot index the declared type.\n  const envelope = ctx.mcpReq.envelope as Record<string, unknown> | undefined;\n  const clientCapabilities =\n    (envelope?.[CLIENT_CAPABILITIES_META_KEY] as ClientCapabilities | undefined) ??\n    // eslint-disable-next-line @typescript-eslint/no-deprecated -- the only source of client capabilities on a legacy connection, where no envelope exists.\n    deps.server.server.getClientCapabilities() ??\n    // A legacy instance that never saw `initialize` is the HTTP leg's\n    // per-request serving (`createMcpHandler` with `legacy: 'stateless'`):\n    // there is no return path for a server-to-client request, so read the\n    // client as having declared nothing. The `input_required` flows then\n    // answer with their named workaround instead of the SDK's generic refusal.\n    // sunset(SEP-2577): removal trigger in docs/adr/002-legacy-protocol-paths-sunset.md.\n    (deps.era === 'legacy' ? {} : undefined);\n\n  return {\n    signal: ctx.mcpReq.signal,\n    ...(ctx.mcpReq._meta ? { _meta: ctx.mcpReq._meta } : {}),\n    requestId: ctx.mcpReq.id,\n    ...(typeof ctx.mcpReq._meta?.[TRACEPARENT_META_KEY] === 'string'\n      ? { traceparent: ctx.mcpReq._meta[TRACEPARENT_META_KEY] }\n      : {}),\n    fs: new GuardedFileSystem(deps.pathGuard),\n    pageStore: deps.pageStore,\n    resourceStore: deps.resourceStore,\n    sendNotification: async (notification) => ctx.mcpReq.notify(notification),\n    inputResponses: ctx.mcpReq.inputResponses,\n    requestState: ctx.mcpReq.requestState,\n    ...(clientCapabilities ? { clientCapabilities } : {}),\n  };\n}\n\n/**\n * Claude Code — and any client that treats `structuredContent` as the canonical\n * model view — discards the `text` blocks when `structuredContent` is present,\n * showing the model `JSON.stringify(structuredContent)` instead. A tool that\n * authored a text result (list's ASCII tree, read's file) meant that text for\n * the model, so it ships its metadata under `_meta`, which no client renders in\n * place of the content. Tools with no `text` keep `structuredContent`: the JSON\n * *is* their model-facing view.\n */\nfunction buildSuccessResponse<O>(result: RunResult<O>): CallToolResult {\n  const hasText = result.text !== undefined;\n  const text = result.text ?? JSON.stringify(result.structured);\n  const content: ContentBlock[] = [{ type: 'text' as const, text }, ...(result.resources ?? [])];\n  return {\n    content,\n    ...(hasText\n      ? // Safe because every `ToolDef.output` is a Zod object schema, so\n        // `structured` is always a plain object. Constraining `O` to prove it\n        // is not worth the cost: the bound has to thread through five generic\n        // sites and still loses to `exactOptionalPropertyTypes` variance on\n        // `RunResult`'s optional fields.\n        { _meta: result.structured as Record<string, unknown> }\n      : { structuredContent: result.structured }),\n    ...(result.isError ? { isError: true } : {}),\n  };\n}\n\nclass ToolExecutor<I extends z.ZodType, O extends z.ZodType> {\n  readonly signal: AbortSignal;\n  private readonly def: ToolDef<I, O>;\n  private readonly parsedArgs: z.infer<I>;\n  private readonly toolCtx: ToolCtx;\n\n  readonly #progressCtx: ProgressCtx;\n  readonly #mcpSink?: McpProgressSink;\n  readonly #progressSession: ProgressSession;\n\n  constructor(toolName: string, ctx: ToolCtx, def: ToolDef<I, O>, parsedArgs: z.infer<I>) {\n    this.def = def;\n    this.parsedArgs = parsedArgs;\n    this.signal = def.timeoutMs\n      ? AbortSignal.any([ctx.signal, AbortSignal.timeout(def.timeoutMs)])\n      : ctx.signal;\n    this.#progressCtx = def.progress ? def.progress(parsedArgs) : { label: def.title };\n    const token = ctx._meta?.progressToken;\n    if (token !== undefined && ctx.sendNotification !== undefined) {\n      this.#mcpSink = new McpProgressSink(toolName, token, ctx.sendNotification);\n    }\n    const isTest = process.env['NODE_ENV'] === 'test' || process.execArgv.includes('--test');\n    this.#progressSession = new ProgressSession({\n      label: this.#progressCtx.label,\n      ...(this.#mcpSink ? { sink: this.#mcpSink } : {}),\n      ...(isTest ? { rateLimitMs: 0 } : {}),\n    });\n    this.toolCtx = {\n      ...ctx,\n      signal: this.signal,\n      log: (level: LoggingLevel, data: unknown, logger?: string) => {\n        const msg = typeof data === 'string' ? data : String(data);\n        // `[req <id>]` first so one grep finds every line of one call; the\n        // traceparent rides along only when the client sent one. Both are\n        // client-supplied, so they pass through `sanitizeLogField`: a control\n        // character in a JSON-RPC id or a traceparent would forge log lines.\n        // The message is flattened too (uncapped): it can carry a resolved\n        // path or OS error text, and input schemas reject CR/LF but not the\n        // Unicode line separators.\n        const trace = ctx.traceparent ? ` ${sanitizeLogField(ctx.traceparent)}` : '';\n        const prefix = logger ? `[${logger}] ` : '';\n        const text = sanitizeLogField(msg, Infinity);\n        Logger.emit(\n          level,\n          `[req ${sanitizeLogField(String(ctx.requestId))}${trace}] ${prefix}${text}`,\n        );\n      },\n      onProgress: (p) => {\n        this.#tick(p);\n      },\n    };\n  }\n\n  #tick(p: { current: number; total?: number }): void {\n    const tickCtx: ProgressCtx = {\n      ...this.#progressCtx,\n      current: p.current,\n      ...(p.total !== undefined ? { total: p.total } : {}),\n    };\n    this.#progressSession.set({ ...p, message: plainMessage('tick', tickCtx) });\n  }\n\n  async #flushProgress(): Promise<void> {\n    if (this.#mcpSink) await this.#mcpSink.flush();\n  }\n\n  private async completeProgress(result: z.infer<O>): Promise<void> {\n    const doneCtx: ProgressCtx = this.def.progressDone\n      ? { ...this.#progressCtx, ...this.def.progressDone(this.parsedArgs, result) }\n      : this.#progressCtx;\n    this.#progressSession.complete(plainMessage('done', doneCtx));\n    await this.#flushProgress();\n  }\n\n  private async failProgress(error: unknown): Promise<{ isError: true; content: ContentBlock[] }> {\n    const errMsg = formatUnknownErrorMessage(error);\n    const message = plainMessage('fail', { ...this.#progressCtx, error: errMsg });\n    this.#progressSession.fail(error, message);\n    await this.#flushProgress();\n    const { text: errorText } = Problem.toText(\n      error,\n      this.def.defaultErrorCode ?? ErrorCode.UNKNOWN,\n    );\n    return {\n      content: [{ type: 'text' as const, text: errorText }],\n      isError: true,\n    };\n  }\n\n  /**\n   * Access-grant pre-check (R7/R8/R9). Before `run` touches the filesystem,\n   * ask PathGuard which of the tool's declared paths are out-of-root and\n   * grantable. If any are and this round carries no verified `requestState`,\n   * return `input_required` (nothing is read or written — R7). On retry, the\n   * verified state must bind this grant set (R9); apply each accepted grant for\n   * the session (R8) and proceed. A declined or ungrantable path is left for\n   * `validateAccess` to fail closed during the operation. Returns `undefined`\n   * when no round-trip is needed and any applicable grants have been applied.\n   */\n  private async precheckGrant(): Promise<InputRequiredResult | undefined> {\n    const extract = this.def.accessPaths;\n    if (!extract) return undefined;\n    const paths = extract(this.parsedArgs);\n    if (paths.length === 0) return undefined;\n    const grantDirs = await this.toolCtx.fs.pathGuard.precheckAccess(paths);\n    if (grantDirs.length === 0) return undefined;\n\n    // One grant dir: a single boolean confirm. Multiple: one multi-select\n    // elicitation so the client picks the subset to allow in one round-trip\n    // (N dirs → 1 round-trip, not N). `pendingRoundTrip` still binds\n    // `paths: grantDirs` sorted, so R9 path-binding is unaffected.\n    const multi = grantDirs.length > 1;\n    const round = await pendingRoundTrip({\n      op: 'grant',\n      pending: grantDirs,\n      requestState: this.toolCtx.requestState,\n      clientCapabilities: this.toolCtx.clientCapabilities,\n      buildInputs: (dirs) =>\n        multi\n          ? [\n              multiSelectInput(\n                'grant',\n                'Grant filesystem access to these directories? Select the ones to allow.',\n                dirs,\n              ),\n            ]\n          : dirs.map((dir, i) => ({\n              key: confirmKey(i),\n              message: `Grant filesystem access to \"${dir}\"?`,\n            })),\n    });\n    if (round !== undefined) return round;\n    // Apply accepted grants for the session (R8). Declined/missing dirs are\n    // skipped here; their paths fail with ACCESS_DENIED during the operation.\n    //\n    // No list-changed notification follows: a grant widens the allowed roots,\n    // and no resource list reads them. The instructions resource has a fixed\n    // URI, the result template lists the ResourceStore, and the file template\n    // lists nothing at all (see resources.ts). Notifying here only bought the\n    // client a round trip to re-fetch a list that could not have changed.\n    //\n    // `readAcceptedMultiChoice` does NOT validate against the offered choices\n    // (attacker-controlled inputResponses on re-entry). Only grant dirs that\n    // were actually offered by precheckAccess — a value outside grantDirs is\n    // ignored and fails closed in validateAccess. The single-select path reads\n    // `confirmKey(i)` for `grantDirs[i]`, so the isSamePath filter is a no-op\n    // there; it only bites for the multi-select array.\n    const accepted = multi\n      ? (readAcceptedMultiChoice(this.toolCtx.inputResponses, 'grant') ?? [])\n      : grantDirs.filter((_dir, i) =>\n          readAcceptedConfirm(this.toolCtx.inputResponses, confirmKey(i)),\n        );\n    for (const dir of accepted) {\n      if (!grantDirs.some((g) => isSamePath(g, dir))) continue;\n      await this.toolCtx.fs.pathGuard.applyGrant(dir);\n    }\n    return undefined;\n  }\n\n  async execute(): Promise<CallToolResult | InputRequiredResult> {\n    try {\n      // Access-grant pre-check before any filesystem touch (R7/R8/R9). A\n      // grant input_required short-circuits here (progress paused, not\n      // finished); an R9 mismatch throws, which this catch surfaces as an\n      // isError tool result like every other handler failure — not a raw\n      // JSON-RPC error (GRANT-1 impact #2).\n      const grantRequired = await this.precheckGrant();\n      if (grantRequired !== undefined) return grantRequired;\n      const result = await this.def.run(this.parsedArgs, this.toolCtx);\n      // input_required is a return value, not a completed call: the client\n      // retries the same tools/call carrying inputResponses, and this\n      // handler re-enters from the top. Skip the progress \"done\" close and\n      // return it verbatim — progress is paused, not finished.\n      if (isInputRequiredResult(result)) {\n        return result;\n      }\n      await this.completeProgress(result.structured);\n      return buildSuccessResponse(result);\n    } catch (error) {\n      return await this.failProgress(error);\n    } finally {\n      await this.#flushProgress();\n    }\n  }\n}\n\n/**\n * Validate with Zod while publishing the precomputed JSON Schema: clients get\n * draft-2020-12, handlers get Zod's coercions, defaults and error messages.\n *\n * Each validator instance is built for exactly one schema and handed straight\n * to `fromJsonSchema(thatSchema, ...)`, which calls `getValidator` once with\n * the same schema — so the argument is redundant here and deliberately ignored.\n * Reusing one instance across schemas would silently validate against `schema`.\n */\nfunction zodJsonSchemaValidator(schema: z.ZodType): jsonSchemaValidator {\n  return {\n    getValidator<U>(): JsonSchemaValidator<U> {\n      return (input: unknown) => {\n        const result = schema.safeParse(input);\n        if (result.success) {\n          return {\n            valid: true as const,\n            data: result.data as U,\n            errorMessage: undefined,\n          };\n        }\n        return {\n          valid: false as const,\n          data: undefined,\n          errorMessage: z.prettifyError(result.error),\n        };\n      };\n    },\n  };\n}\n\n/**\n * Generate the wire copy of a schema for `tools/list`. The Zod schema keeps\n * every constraint for runtime validation; the `override` pass only trims what\n * the wire copy costs every client at session start:\n *\n * - `$schema` and `title` carry no information the host uses.\n * - `maximum: Number.MAX_SAFE_INTEGER` is zod's int() artifact, not a bound.\n * - `examples` is dropped in both directions: on output it describes a field the\n *   server itself fills in, and on input every description that carried one\n *   already spells the same example out inline, so the keyword paid twice.\n *\n * Output `description`s are NOT dropped. They were, and the result was a wire\n * contract the model had to guess at: `delete` returns `path` XOR `paths`,\n * `edit.diff` appears only under dryRun, `read.value` has no required field at\n * all. None of that is inferable from types alone.\n *\n * No shared subschema carries a `.meta({ id })`, so zod inlines every one of\n * them and the emitted document has no `$defs`/`$ref` to dereference.\n */\nfunction toDraft202012(schema: z.ZodType, io: 'input' | 'output'): JsonSchemaType {\n  const generated = z.toJSONSchema(schema, {\n    target: 'draft-2020-12',\n    io,\n    override: ({ jsonSchema }) => {\n      const node = jsonSchema as Record<string, unknown>;\n      delete node['title'];\n      if (node['maximum'] === Number.MAX_SAFE_INTEGER) delete node['maximum'];\n      delete node['examples'];\n    },\n  }) as Record<string, unknown>;\n  delete generated['$schema'];\n  return generated;\n}\n\nexport function defineTool<I extends z.ZodType, O extends z.ZodType>(\n  def: ToolDef<I, O>,\n): DefinedTool {\n  const inputJsonSchema = toDraft202012(def.input, 'input');\n\n  // Nothing here depends on `deps`, so it is built once per tool definition\n  // rather than once per `register` — the HTTP leg registers every tool afresh\n  // on each request.\n  // Published annotations are derived, not passed through. `readOnlyHint` is\n  // load-bearing (MUTATING_TOOL_NAMES derives the --read-only gate from it) and\n  // `openWorldHint: false` is a real claim for a filesystem server. The other\n  // two describe behavior a read-only tool cannot have, and restate the default\n  // for a mutating one — 29 tokens per tool for nothing a client acts on.\n  const publishedAnnotations: ToolAnnotations = {\n    readOnlyHint: def.annotations.readOnlyHint,\n    openWorldHint: def.annotations.openWorldHint ?? false,\n    ...(def.annotations.readOnlyHint\n      ? {}\n      : { destructiveHint: def.annotations.destructiveHint ?? true }),\n  };\n\n  const toolDefShape = {\n    title: def.title,\n    description: def.description,\n    inputSchema: fromJsonSchema<z.infer<I>>(inputJsonSchema, zodJsonSchemaValidator(def.input)),\n    // No `outputSchema`, ever. Publishing one obliges the result to carry\n    // `structuredContent` (clients enforce it), and every tool that authors its\n    // own text ships its metadata under `_meta` instead — see\n    // `buildSuccessResponse`. The two cannot both hold, and the text is what\n    // the model reads. `TOOL-SURFACE-001` pins this for the whole surface.\n    //\n    // `def.output` stays: it types `RunResult<z.infer<O>>`, which is what makes\n    // a tool returning the wrong shape a compile error.\n    annotations: publishedAnnotations,\n  };\n\n  return {\n    name: def.name,\n    annotations: def.annotations,\n\n    register(deps: ToolDeps): RegisteredTool {\n      return deps.server.registerTool(def.name, toolDefShape, async (args, ctx) =>\n        new ToolExecutor<I, O>(def.name, toToolCtx(ctx, deps), def, args).execute(),\n      );\n    },\n  };\n}\n"]}
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type {\n  CallToolResult,\n  ClientCapabilities,\n  ContentBlock,\n  InputRequiredResult,\n  McpServer,\n  Notification,\n  RegisteredTool,\n  RequestId,\n  RequestMeta,\n  RequestStateAccessor,\n  ServerContext,\n  StandardSchemaWithJSON,\n  ToolAnnotations,\n} from '@modelcontextprotocol/server';\nimport {\n  CLIENT_CAPABILITIES_META_KEY,\n  isInputRequiredResult,\n  TRACEPARENT_META_KEY,\n} from '@modelcontextprotocol/server';\n\nimport type * as z from 'zod/v4';\n\nimport { ErrorCode, formatUnknownErrorMessage, Problem } from '../core/errors.ts';\nimport type { ProgressCtx } from '../core/fmt.ts';\nimport { plainMessage } from '../core/fmt.ts';\nimport { GuardedFileSystem } from '../core/fs.ts';\nimport {\n  confirmKey,\n  pendingRoundTrip,\n  readAcceptedConfirm,\n  readAcceptedMultiChoice,\n} from '../core/input-required.ts';\nimport { Logger, sanitizeLogField } from '../core/observability.ts';\nimport type { LoggingLevel } from '../core/observability.ts';\nimport { isSamePath } from '../core/path-utils.ts';\nimport type { PathGuard } from '../core/path.ts';\nimport type { PageSnapshotStore, ResourceStore } from '../core/store.ts';\nimport { ProgressSession } from './progress.ts';\n\nexport interface ToolCtx {\n  readonly signal: AbortSignal;\n  readonly _meta?: RequestMeta | undefined;\n  /** The JSON-RPC id of the `tools/call` this context serves; prefixes every log line. */\n  readonly requestId: RequestId;\n  /** W3C trace context the client put in `_meta`, when it did; rides the log prefix. */\n  readonly traceparent?: string | undefined;\n  readonly fs: GuardedFileSystem;\n  readonly pageStore: PageSnapshotStore;\n  readonly resourceStore: ResourceStore | undefined;\n  /** Emits a log line to stderr via `Logger.emit`, gated by `LOG_LEVEL`. */\n  readonly log?: (level: LoggingLevel, data: unknown, logger?: string) => void;\n  readonly sendNotification?: (notification: Notification) => Promise<void>;\n  readonly onProgress?: (params: { current: number; total?: number }) => void;\n  /**\n   * Multi-round-trip `inputResponses` carried by a retried `tools/call`\n   * (protocol revision 2026-07-28); `undefined` on the first round. Bare,\n   * unvalidated client values — handlers read them through\n   * `readAcceptedConfirm`.\n   */\n  readonly inputResponses?: Record<string, unknown> | undefined;\n  /**\n   * Reads the verified multi-round-trip `requestState` for the current round:\n   * the decoded `PendingState` the `requestStateCodec` verified, or `undefined`\n   * when the round carried no state (the first round). `undefined` when no\n   * live request context is available.\n   */\n  readonly requestState?: RequestStateAccessor | undefined;\n  /**\n   * What the connected client declared it can do, or `undefined` when this\n   * connection cannot say. Read by the `input_required` flows: an embedded\n   * elicitation sent to a client that never declared `elicitation` is rejected\n   * by the SDK with `-32021` before it reaches the wire, so the handlers check\n   * first and answer with an actionable tool error instead.\n   *\n   * Two sources, because the eras differ: a legacy connection negotiated them\n   * at `initialize` (`Server.getClientCapabilities()`), a modern one carries\n   * them per request in the `_meta` envelope and never runs `initialize` at\n   * all. `undefined` means \"cannot tell\" — never \"no capabilities\".\n   */\n  readonly clientCapabilities?: ClientCapabilities | undefined;\n  /** The SDK request context this call runs under; `pendingRoundTrip` binds minted state to it. */\n  readonly serverCtx: ServerContext;\n}\n\ninterface ToolDeps {\n  readonly server: McpServer;\n  readonly pathGuard: PathGuard;\n  readonly pageStore: PageSnapshotStore;\n  readonly resourceStore: ResourceStore | undefined;\n  readonly era?: 'legacy' | 'modern';\n}\n\ninterface RunResult<T> {\n  readonly structured: T;\n  readonly text?: string;\n  readonly resources?: ContentBlock[];\n  /**\n   * The call as a whole failed. Batch tools set it from `isTotalFailure` in\n   * `batch.ts` — every requested item failed — so the executor never has to\n   * know a tool's output shape. Absent or `false` means the call did work.\n   */\n  readonly isError?: boolean;\n}\n\n/**\n * `ToolAnnotations` with `readOnlyHint` required. It is optional in the SDK, but\n * MUTATING_TOOL_NAMES derives the `--read-only` gate from it, so a tool that\n * forgets it must be a compile error rather than a silent reclassification.\n */\ntype DeclaredAnnotations = ToolAnnotations & { readonly readOnlyHint: boolean };\n\nexport interface ToolDef<I extends z.ZodType, O extends z.ZodType> {\n  readonly name: string;\n  readonly title: string;\n  readonly description: string;\n  readonly input: I;\n  readonly output: O;\n  readonly annotations: DeclaredAnnotations;\n  readonly timeoutMs?: number;\n  readonly progress?: (args: z.infer<I>) => ProgressCtx;\n  readonly progressDone?: (args: z.infer<I>, result: z.infer<O>) => Partial<ProgressCtx>;\n  readonly defaultErrorCode?: ErrorCode;\n  /**\n   * The filesystem paths this tool will operate on, extracted from its parsed\n   * args. The executor runs an access-grant pre-check over these BEFORE `run`\n   * (R7): any path outside the granted roots yields an `input_required`\n   * round-trip requesting a grant, and nothing is touched until the client\n   * retries with an accepted grant (R8). Omit for tools that do not operate on\n   * caller-supplied filesystem paths.\n   */\n  readonly accessPaths?: (args: z.infer<I>) => readonly string[];\n  readonly run: (\n    args: z.infer<I>,\n    ctx: ToolCtx,\n  ) => Promise<RunResult<z.infer<O>> | InputRequiredResult>;\n}\n\nexport interface DefinedTool {\n  readonly name: string;\n  readonly annotations: DeclaredAnnotations;\n\n  register(deps: ToolDeps): RegisteredTool;\n}\n\nfunction toToolCtx(\n  ctx: ServerContext,\n  deps: Pick<ToolDeps, 'pathGuard' | 'pageStore' | 'resourceStore' | 'server' | 'era'>,\n): ToolCtx {\n  // Envelope first, accessor second — the two eras carry this differently.\n  // A modern request states the capabilities in its own `_meta` envelope; a\n  // legacy connection fixed them at `initialize` and has no envelope at all.\n  // The deprecated accessor still answers for both today (the SDK backfills it\n  // per request from the validated envelope on modern instances), but reading\n  // the envelope directly is the supported path, so it leads: when the accessor\n  // goes, legacy degrades to \"cannot tell\", which fails open to the behavior\n  // that predates this check.\n  //\n  // The cast is the SDK's shipped `RequestMetaEnvelope` declaration collapsing\n  // to `{}` — the reserved keys survive at runtime but not in the .d.ts, so the\n  // key constant cannot index the declared type.\n  const envelope = ctx.mcpReq.envelope as Record<string, unknown> | undefined;\n  const clientCapabilities =\n    (envelope?.[CLIENT_CAPABILITIES_META_KEY] as ClientCapabilities | undefined) ??\n    // eslint-disable-next-line @typescript-eslint/no-deprecated -- the only source of client capabilities on a legacy connection, where no envelope exists.\n    deps.server.server.getClientCapabilities() ??\n    // A legacy instance that never saw `initialize` is the HTTP leg's\n    // per-request serving (`createMcpHandler` with `legacy: 'stateless'`):\n    // there is no return path for a server-to-client request, so read the\n    // client as having declared nothing. The `input_required` flows then\n    // answer with their named workaround instead of the SDK's generic refusal.\n    // sunset(SEP-2577): removal trigger in docs/adr/002-legacy-protocol-paths-sunset.md.\n    (deps.era === 'legacy' ? {} : undefined);\n\n  return {\n    signal: ctx.mcpReq.signal,\n    ...(ctx.mcpReq._meta ? { _meta: ctx.mcpReq._meta } : {}),\n    requestId: ctx.mcpReq.id,\n    ...(typeof ctx.mcpReq._meta?.[TRACEPARENT_META_KEY] === 'string'\n      ? { traceparent: ctx.mcpReq._meta[TRACEPARENT_META_KEY] }\n      : {}),\n    fs: new GuardedFileSystem(deps.pathGuard),\n    pageStore: deps.pageStore,\n    resourceStore: deps.resourceStore,\n    sendNotification: async (notification) => ctx.mcpReq.notify(notification),\n    inputResponses: ctx.mcpReq.inputResponses,\n    requestState: ctx.mcpReq.requestState,\n    serverCtx: ctx,\n    ...(clientCapabilities ? { clientCapabilities } : {}),\n  };\n}\n\n/**\n * Claude Code — and any client that treats `structuredContent` as the canonical\n * model view — discards the `text` blocks when `structuredContent` is present,\n * showing the model `JSON.stringify(structuredContent)` instead. A tool that\n * authored a text result (list's ASCII tree, read's file) meant that text for\n * the model, so it ships its metadata under `_meta`, which no client renders in\n * place of the content. Tools with no `text` keep `structuredContent`: the JSON\n * *is* their model-facing view.\n */\nfunction buildSuccessResponse<O>(result: RunResult<O>): CallToolResult {\n  const hasText = result.text !== undefined;\n  const text = result.text ?? JSON.stringify(result.structured);\n  const content: ContentBlock[] = [{ type: 'text' as const, text }, ...(result.resources ?? [])];\n  return {\n    content,\n    ...(hasText\n      ? // Safe because every `ToolDef.output` is a Zod object schema, so\n        // `structured` is always a plain object. Constraining `O` to prove it\n        // is not worth the cost: the bound has to thread through five generic\n        // sites and still loses to `exactOptionalPropertyTypes` variance on\n        // `RunResult`'s optional fields.\n        { _meta: result.structured as Record<string, unknown> }\n      : { structuredContent: result.structured }),\n    ...(result.isError ? { isError: true } : {}),\n  };\n}\n\nclass ToolExecutor<I extends z.ZodType, O extends z.ZodType> {\n  readonly signal: AbortSignal;\n  private readonly def: ToolDef<I, O>;\n  private readonly parsedArgs: z.infer<I>;\n  private readonly toolCtx: ToolCtx;\n\n  readonly #progressCtx: ProgressCtx;\n  readonly #progressSession: ProgressSession;\n\n  constructor(toolName: string, ctx: ToolCtx, def: ToolDef<I, O>, parsedArgs: z.infer<I>) {\n    this.def = def;\n    this.parsedArgs = parsedArgs;\n    this.signal = def.timeoutMs\n      ? AbortSignal.any([ctx.signal, AbortSignal.timeout(def.timeoutMs)])\n      : ctx.signal;\n    this.#progressCtx = def.progress ? def.progress(parsedArgs) : { label: def.title };\n    const token = ctx._meta?.progressToken;\n    const notify = ctx.sendNotification;\n    this.#progressSession = new ProgressSession({\n      label: this.#progressCtx.label,\n      ...(token !== undefined && notify !== undefined ? { sink: { toolName, token, notify } } : {}),\n    });\n    this.toolCtx = {\n      ...ctx,\n      signal: this.signal,\n      log: (level: LoggingLevel, data: unknown, logger?: string) => {\n        const msg = typeof data === 'string' ? data : String(data);\n        // `[req <id>]` first so one grep finds every line of one call; the\n        // traceparent rides along only when the client sent one. Both are\n        // client-supplied, so they pass through `sanitizeLogField`: a control\n        // character in a JSON-RPC id or a traceparent would forge log lines.\n        // The message is flattened too (uncapped): it can carry a resolved\n        // path or OS error text, and input schemas reject CR/LF but not the\n        // Unicode line separators.\n        const trace = ctx.traceparent ? ` ${sanitizeLogField(ctx.traceparent)}` : '';\n        const prefix = logger ? `[${logger}] ` : '';\n        const text = sanitizeLogField(msg, Infinity);\n        Logger.emit(\n          level,\n          `[req ${sanitizeLogField(String(ctx.requestId))}${trace}] ${prefix}${text}`,\n        );\n      },\n      onProgress: (p) => {\n        this.#tick(p);\n      },\n    };\n  }\n\n  #tick(p: { current: number; total?: number }): void {\n    const tickCtx: ProgressCtx = {\n      ...this.#progressCtx,\n      current: p.current,\n      ...(p.total !== undefined ? { total: p.total } : {}),\n    };\n    this.#progressSession.set({ ...p, message: plainMessage('tick', tickCtx) });\n  }\n\n  private async completeProgress(result: z.infer<O>): Promise<void> {\n    const doneCtx: ProgressCtx = this.def.progressDone\n      ? { ...this.#progressCtx, ...this.def.progressDone(this.parsedArgs, result) }\n      : this.#progressCtx;\n    this.#progressSession.complete(plainMessage('done', doneCtx));\n    await this.#progressSession.flush();\n  }\n\n  private async failProgress(error: unknown): Promise<{ isError: true; content: ContentBlock[] }> {\n    const errMsg = formatUnknownErrorMessage(error);\n    this.#progressSession.fail(plainMessage('fail', { ...this.#progressCtx, error: errMsg }));\n    await this.#progressSession.flush();\n    const { text: errorText } = Problem.toText(\n      error,\n      this.def.defaultErrorCode ?? ErrorCode.UNKNOWN,\n    );\n    return {\n      content: [{ type: 'text' as const, text: errorText }],\n      isError: true,\n    };\n  }\n\n  /**\n   * Access-grant pre-check (R7/R8/R9). Before `run` touches the filesystem,\n   * ask PathGuard which of the tool's declared paths are out-of-root and\n   * grantable. If any are and this round carries no verified `requestState`,\n   * return `input_required` (nothing is read or written — R7). On retry, the\n   * verified state must bind this grant set (R9); apply each accepted grant for\n   * the session (R8) and proceed. A declined or ungrantable path is left for\n   * `validateAccess` to fail closed during the operation. Returns `undefined`\n   * when no round-trip is needed and any applicable grants have been applied.\n   */\n  private async precheckGrant(): Promise<InputRequiredResult | undefined> {\n    const extract = this.def.accessPaths;\n    if (!extract) return undefined;\n    const paths = extract(this.parsedArgs);\n    if (paths.length === 0) return undefined;\n    const grantDirs = await this.toolCtx.fs.pathGuard.precheckAccess(paths);\n    if (grantDirs.length === 0) return undefined;\n\n    // One grant dir: a single boolean confirm. Multiple: one multi-select\n    // elicitation so the client picks the subset to allow in one round-trip\n    // (N dirs → 1 round-trip, not N). `pendingRoundTrip` still binds\n    // `paths: grantDirs` sorted, so R9 path-binding is unaffected.\n    const multi = grantDirs.length > 1;\n    const round = await pendingRoundTrip({\n      op: 'grant',\n      pending: grantDirs,\n      requestState: this.toolCtx.requestState,\n      clientCapabilities: this.toolCtx.clientCapabilities,\n      serverCtx: this.toolCtx.serverCtx,\n      buildInputs: (dirs) =>\n        multi\n          ? [\n              {\n                key: 'grant',\n                message: 'Grant filesystem access to these directories? Select the ones to allow.',\n                choices: dirs,\n                multi: true,\n              },\n            ]\n          : dirs.map((dir, i) => ({\n              key: confirmKey(i),\n              message: `Grant filesystem access to \"${dir}\"?`,\n            })),\n    });\n    if (round !== undefined) return round;\n    // Apply accepted grants for the session (R8). Declined/missing dirs are\n    // skipped here; their paths fail with ACCESS_DENIED during the operation.\n    //\n    // No list-changed notification follows: a grant widens the allowed roots,\n    // and no resource list reads them. The instructions resource has a fixed\n    // URI, the result template lists the ResourceStore, and the file template\n    // lists nothing at all (see resources.ts). Notifying here only bought the\n    // client a round trip to re-fetch a list that could not have changed.\n    //\n    // `readAcceptedMultiChoice` does NOT validate against the offered choices\n    // (attacker-controlled inputResponses on re-entry). Only grant dirs that\n    // were actually offered by precheckAccess — a value outside grantDirs is\n    // ignored and fails closed in validateAccess. The single-select path reads\n    // `confirmKey(i)` for `grantDirs[i]`, so the isSamePath filter is a no-op\n    // there; it only bites for the multi-select array.\n    const accepted = multi\n      ? (readAcceptedMultiChoice(this.toolCtx.inputResponses, 'grant') ?? [])\n      : grantDirs.filter((_dir, i) =>\n          readAcceptedConfirm(this.toolCtx.inputResponses, confirmKey(i)),\n        );\n    for (const dir of accepted) {\n      if (!grantDirs.some((g) => isSamePath(g, dir))) continue;\n      await this.toolCtx.fs.pathGuard.applyGrant(dir);\n    }\n    return undefined;\n  }\n\n  async execute(): Promise<CallToolResult | InputRequiredResult> {\n    try {\n      // Access-grant pre-check before any filesystem touch (R7/R8/R9). A\n      // grant input_required short-circuits here (progress paused, not\n      // finished); an R9 mismatch throws, which this catch surfaces as an\n      // isError tool result like every other handler failure — not a raw\n      // JSON-RPC error (GRANT-1 impact #2).\n      const grantRequired = await this.precheckGrant();\n      if (grantRequired !== undefined) return grantRequired;\n      const result = await this.def.run(this.parsedArgs, this.toolCtx);\n      // input_required is a return value, not a completed call: the client\n      // retries the same tools/call carrying inputResponses, and this\n      // handler re-enters from the top. Skip the progress \"done\" close and\n      // return it verbatim — progress is paused, not finished.\n      if (isInputRequiredResult(result)) {\n        return result;\n      }\n      await this.completeProgress(result.structured);\n      return buildSuccessResponse(result);\n    } catch (error) {\n      return await this.failProgress(error);\n    } finally {\n      await this.#progressSession.flush();\n    }\n  }\n}\n\nexport function defineTool<I extends z.ZodType, O extends z.ZodType>(\n  def: ToolDef<I, O>,\n): DefinedTool {\n  // Nothing here depends on `deps`, so it is built once per tool definition\n  // rather than once per `register` — the HTTP leg registers every tool afresh\n  // on each request.\n  // Published annotations are derived, not passed through. `readOnlyHint` is\n  // load-bearing (MUTATING_TOOL_NAMES derives the --read-only gate from it) and\n  // `openWorldHint: false` is a real claim for a filesystem server. The other\n  // two describe behavior a read-only tool cannot have, and restate the default\n  // for a mutating one — 29 tokens per tool for nothing a client acts on.\n  const publishedAnnotations: ToolAnnotations = {\n    readOnlyHint: def.annotations.readOnlyHint,\n    openWorldHint: def.annotations.openWorldHint ?? false,\n    ...(def.annotations.readOnlyHint\n      ? {}\n      : { destructiveHint: def.annotations.destructiveHint ?? true }),\n  };\n\n  const toolDefShape = {\n    title: def.title,\n    description: def.description,\n    // The Zod schema goes in as-is: the SDK validates with it and publishes its\n    // own draft-2020-12 conversion in `tools/list`. The cast only names the\n    // in/out types a generic `ZodType` cannot surface through `~standard`.\n    inputSchema: def.input as unknown as StandardSchemaWithJSON<z.input<I>, z.output<I>>,\n    // No `outputSchema`, ever. Publishing one obliges the result to carry\n    // `structuredContent` (clients enforce it), and every tool that authors its\n    // own text ships its metadata under `_meta` instead — see\n    // `buildSuccessResponse`. The two cannot both hold, and the text is what\n    // the model reads. `TOOL-SURFACE-001` pins this for the whole surface.\n    //\n    // `def.output` stays: it types `RunResult<z.infer<O>>`, which is what makes\n    // a tool returning the wrong shape a compile error.\n    annotations: publishedAnnotations,\n  };\n\n  return {\n    name: def.name,\n    annotations: def.annotations,\n\n    register(deps: ToolDeps): RegisteredTool {\n      return deps.server.registerTool(def.name, toolDefShape, async (args, ctx) =>\n        new ToolExecutor<I, O>(def.name, toToolCtx(ctx, deps), def, args).execute(),\n      );\n    },\n  };\n}\n"]}

package/dist/tools/delete.d.ts

@@ -1,2 +1,2 @@
-export declare const DELETE: import("./define.js").DefinedTool;
+export declare const DELETE: import("./define.ts").DefinedTool;
 //# sourceMappingURL=delete.d.ts.map

package/dist/tools/delete.js

@@ -1,15 +1,15 @@
 import { isInputRequiredResult } from '@modelcontextprotocol/server';
 import { basename } from 'node:path';
 import * as z from 'zod/v4';
-import { processInParallel } from '../core/concurrency.js';
-import { ErrorCode, FsError, isFsError, isNodeError, isNotFoundErrno, Problem, } from '../core/errors.js';
-import { joinRoster, pathLabel } from '../core/fmt.js';
-import { choiceInput, confirmKey, pendingRoundTrip, readAcceptedChoice, } from '../core/input-required.js';
-import { resolveEntryType } from '../core/primitives.js';
-import { defaultFalseBoolean, OperationSummarySchema, PerFileErrorSchema, RequiredPath, } from '../core/schema.js';
-import { PARALLEL_CONCURRENCY } from '../core/util.js';
-import { isTotalFailure } from './batch.js';
-import { defineTool } from './define.js';
+import { processInParallel } from "../core/concurrency.js";
+import { ErrorCode, FsError, isFsError, isNodeError, isNotFoundErrno, Problem, } from "../core/errors.js";
+import { joinRoster, pathLabel } from "../core/fmt.js";
+import { confirmKey, describeRefusal, pendingRoundTrip, readAcceptedChoice, } from "../core/input-required.js";
+import { resolveEntryType } from "../core/path-utils.js";
+import { defaultFalseBoolean, OperationSummarySchema, PerFileErrorSchema, RequiredPath, } from "../core/schema.js";
+import { PARALLEL_CONCURRENCY } from "../core/util.js";
+import { isTotalFailure } from "./batch.js";
+import { defineTool } from "./define.js";
 const DeleteInputSchema = z.strictObject({
     paths: z
         .array(RequiredPath)
@@ -183,9 +183,7 @@ async function executePlan(plan, args, ctx, pendingSorted) {
             return {
                 failure: {
                     path: plan.validPath,
-                    error: Problem.cancelled('Delete cancelled: confirmation was declined or missing', {
-                        path: plan.validPath,
-                    }),
+                    error: Problem.cancelled(`Delete cancelled: confirmation was ${describeRefusal(ctx.inputResponses, key)}`, { path: plan.validPath }),
                 },
             };
         }
@@ -231,7 +229,12 @@ async function handleDelete(args, ctx) {
             pending: pendingSorted,
             requestState: ctx.requestState,
             clientCapabilities: ctx.clientCapabilities,
-            buildInputs: (ps) => ps.map((p, i) => choiceInput(confirmKey(i), `Permanently delete "${p}" and all its contents? This cannot be undone.`, ['delete', 'skip'])),
+            serverCtx: ctx.serverCtx,
+            buildInputs: (ps) => ps.map((p, i) => ({
+                key: confirmKey(i),
+                message: `Permanently delete "${p}" and all its contents? This cannot be undone.`,
+                choices: ['delete', 'skip'],
+            })),
         });
         if (round !== undefined)
             return round;

package/dist/tools/delete.js.map

@@ -1 +1 @@
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type { InputRequiredResult } from '@modelcontextprotocol/server';\nimport { isInputRequiredResult } from '@modelcontextprotocol/server';\n\nimport { basename } from 'node:path';\n\nimport * as z from 'zod/v4';\n\nimport { processInParallel } from '../core/concurrency.js';\nimport {\n  ErrorCode,\n  FsError,\n  isFsError,\n  isNodeError,\n  isNotFoundErrno,\n  Problem,\n} from '../core/errors.js';\nimport { joinRoster, pathLabel } from '../core/fmt.js';\nimport type { FileType, GuardedFileSystem } from '../core/fs.js';\nimport {\n  choiceInput,\n  confirmKey,\n  pendingRoundTrip,\n  readAcceptedChoice,\n} from '../core/input-required.js';\nimport { resolveEntryType } from '../core/primitives.js';\nimport {\n  defaultFalseBoolean,\n  OperationSummarySchema,\n  PerFileErrorSchema,\n  RequiredPath,\n} from '../core/schema.js';\nimport { PARALLEL_CONCURRENCY } from '../core/util.js';\nimport { isTotalFailure } from './batch.js';\nimport type { ToolCtx } from './define.js';\nimport { defineTool } from './define.js';\n\nconst DeleteInputSchema = z.strictObject({\n  paths: z\n    .array(RequiredPath)\n    .min(1)\n    .max(1000)\n    .describe('Paths to delete (max 1000); accepts files, directories, or symlinks'),\n  recursive: defaultFalseBoolean(\n    'Delete directory contents recursively (required for non-empty directories)',\n  ),\n  ignoreIfNotExists: defaultFalseBoolean(\n    'Silently succeed if a path does not exist instead of returning an error',\n  ),\n});\n\nconst DeletePerPathValueSchema = z.strictObject({\n  deleted: z.boolean().describe('True when the path was removed; false when the user chose Skip'),\n});\n\nconst DeletePerPathSchema = z.strictObject({\n  path: z.string().describe('Requested path'),\n  value: DeletePerPathValueSchema.optional().describe('Delete outcome; present on success'),\n  error: PerFileErrorSchema.optional().describe('Error details; present on failure'),\n});\n\n// One envelope for every batch tool: `read` and `stat` already answer with\n// `{ results, summary }`, so `delete` does too. The old shape switched between\n// `{ ok, path }` and `{ ok: false, failures }` depending on the outcome, which\n// left a caller parsing two schemas for one tool and never named the paths in a\n// multi-delete's text.\nconst DeleteOutputSchema = z.strictObject({\n  results: z\n    .array(DeletePerPathSchema)\n    .describe('Per-path results ordered to match the input paths'),\n  summary: OperationSummarySchema,\n});\n\ntype DeleteInput = z.infer<typeof DeleteInputSchema>;\ntype DeleteOutput = z.infer<typeof DeleteOutputSchema>;\ntype DeletePerPathResult = z.infer<typeof DeletePerPathSchema>;\n\n// Internal types for error handling\ninterface DeleteFailure {\n  path: string;\n  error: Problem;\n}\n\nconst ERR_NOT_EMPTY = new Error('Directory not empty. Set recursive: true.');\n\nfunction toDeleteFailure(path: string, error: unknown): DeleteFailure {\n  // A missing path reached here as the raw errno text (\"ENOENT: no such file or\n  // directory, lstat 'c:\\...'\"), while `stat` reported the same condition as\n  // \"Path not found\". One condition, one message — and the syscall name stays\n  // off the wire.\n  if (isNotFoundErrno(error)) {\n    return {\n      path,\n      error: Problem.fromUnknown(\n        new FsError(ErrorCode.NOT_FOUND, 'Path not found', path),\n        ErrorCode.NOT_FOUND,\n        path,\n      ),\n    };\n  }\n  if (\n    isNodeError(error) &&\n    (error.code === 'ENOTEMPTY' || error.code === 'EISDIR' || error.code === 'EEXIST')\n  ) {\n    return {\n      path,\n      error: Problem.fromUnknown(ERR_NOT_EMPTY, ErrorCode.INVALID_INPUT, path),\n    };\n  }\n  return { path, error: Problem.fromUnknown(error, ErrorCode.UNKNOWN, path) };\n}\n\ntype LstatResult = Awaited<ReturnType<GuardedFileSystem['lstat']>>;\n\n/** A path's pre-checked plan: validated, statted, and flagged if it needs confirmation. */\ninterface DeletePlan {\n  inputPath: string;\n  validPath: string;\n  itemType: FileType;\n  firstStats: LstatResult;\n  /** Recursive + non-empty directory: needs a round-trip confirmation. */\n  pending: boolean;\n}\n\ntype PlanResult =\n  | { status: 'fail'; failure: DeleteFailure }\n  | { status: 'noop'; deleted: string }\n  | { status: 'plan'; plan: DeletePlan };\n\n/**\n * Phase 1 (no mutation): validate, stat, and decide whether a path needs a\n * confirmation before anything is deleted. A pending path is a recursive\n * non-empty directory; everything else is ready to delete directly.\n */\nasync function planPath(\n  inputPath: string,\n  args: Pick<DeleteInput, 'recursive' | 'ignoreIfNotExists'>,\n  fs: Pick<GuardedFileSystem, 'pathGuard' | 'lstat' | 'hasChildrenUnchecked'>,\n): Promise<PlanResult> {\n  let validPath: string;\n  try {\n    validPath = await fs.pathGuard.validatePathForDelete(inputPath);\n  } catch (error) {\n    if (\n      args.ignoreIfNotExists &&\n      ((isFsError(error) && error.code === ErrorCode.NOT_FOUND) || isNotFoundErrno(error))\n    ) {\n      return { status: 'noop', deleted: inputPath };\n    }\n    return { status: 'fail', failure: toDeleteFailure(inputPath, error) };\n  }\n\n  if (fs.pathGuard.isAllowedRoot(validPath)) {\n    return {\n      status: 'fail',\n      // Keyed by the REQUESTED path, like every other failure here: handleDelete\n      // orders results by input path, and a resolved key would not be found for\n      // a relative request.\n      failure: {\n        path: inputPath,\n        error: Problem.accessDenied('Deleting a workspace root directory is not allowed', {\n          path: validPath,\n        }),\n      },\n    };\n  }\n\n  let firstStats: LstatResult;\n  try {\n    firstStats = await fs.lstat(validPath);\n  } catch (error) {\n    if (isNotFoundErrno(error) && args.ignoreIfNotExists) {\n      return { status: 'noop', deleted: inputPath };\n    }\n    return { status: 'fail', failure: toDeleteFailure(inputPath, error) };\n  }\n\n  const itemType = resolveEntryType(firstStats.stats);\n  let hasChildren = false;\n  if (args.recursive && itemType === 'directory') {\n    try {\n      hasChildren = await fs.hasChildrenUnchecked(validPath);\n    } catch (error) {\n      return { status: 'fail', failure: toDeleteFailure(inputPath, error) };\n    }\n  }\n  const pending = hasChildren;\n  return { status: 'plan', plan: { inputPath, validPath, itemType, firstStats, pending } };\n}\n\nasync function performDeletion(\n  validPath: string,\n  args: Pick<DeleteInput, 'recursive' | 'ignoreIfNotExists'>,\n  isDirectory: boolean,\n  fsOps: Pick<GuardedFileSystem, 'rm' | 'rmdir'>,\n): Promise<void> {\n  if (isDirectory && !args.recursive) {\n    await fsOps.rmdir(validPath);\n  } else {\n    await fsOps.rm(validPath, {\n      recursive: args.recursive,\n      force: args.ignoreIfNotExists,\n    });\n  }\n}\n\n/**\n * Phase 2 (mutation): TOCTOU re-stat against the plan's first stat, then\n * delete. A type or identity change across the confirmation gap fails closed\n * rather than deleting a replacement object the user never confirmed.\n */\nasync function finalizeDeletion(\n  plan: DeletePlan,\n  args: Pick<DeleteInput, 'recursive' | 'ignoreIfNotExists'>,\n  ctx: Pick<ToolCtx, 'fs' | 'log'>,\n): Promise<{ deleted: string } | { failure: DeleteFailure }> {\n  let currentStats: LstatResult;\n  try {\n    currentStats = await ctx.fs.lstat(plan.validPath);\n  } catch (error) {\n    if (isNotFoundErrno(error) && args.ignoreIfNotExists) {\n      return { deleted: plan.validPath };\n    }\n    return { failure: toDeleteFailure(plan.inputPath, error) };\n  }\n\n  const currentItemType = resolveEntryType(currentStats.stats);\n  // Identity comparison, not just the coarse category: a swap during the\n  // confirmation gap (delete original, create a same-named replacement) keeps\n  // the type but changes dev/ino/birthtimeMs. birthtimeMs is the primary\n  // cross-platform signal — dev/ino can read 0 on some non-POSIX drivers — so\n  // combine all three rather than trusting dev/ino alone.\n  const identityChanged =\n    plan.firstStats.stats.dev !== currentStats.stats.dev ||\n    plan.firstStats.stats.ino !== currentStats.stats.ino ||\n    plan.firstStats.stats.birthtimeMs !== currentStats.stats.birthtimeMs;\n  if (plan.itemType !== 'other' && (currentItemType !== plan.itemType || identityChanged)) {\n    return {\n      failure: {\n        path: plan.validPath,\n        error: Problem.invalidInput(\n          `Delete failed: item type changed from ${plan.itemType} to ${currentItemType} during confirmation.`,\n          { path: plan.validPath },\n        ),\n      },\n    };\n  }\n\n  try {\n    await performDeletion(plan.validPath, args, currentStats.stats.isDirectory(), ctx.fs);\n  } catch (error) {\n    return { failure: toDeleteFailure(plan.inputPath, error) };\n  }\n\n  ctx.log?.('info', `rm: ${plan.inputPath}`, 'delete');\n  return { deleted: plan.validPath };\n}\n\n/**\n * Execute one planned path on the retry round. A pending path deletes only on\n * an accepted `confirm: true`; decline, cancel, or a missing key report\n * `CANCELLED` for that path (R3 proceed, R4/R5 cancelled). A non-pending path\n * deletes directly (R14: non-pending items proceed alongside accepted ones).\n */\nasync function executePlan(\n  plan: DeletePlan,\n  args: Pick<DeleteInput, 'recursive' | 'ignoreIfNotExists'>,\n  ctx: Pick<ToolCtx, 'fs' | 'inputResponses' | 'log'>,\n  pendingSorted: readonly string[],\n): Promise<{ deleted: string } | { failure: DeleteFailure } | { skipped: true; path: string }> {\n  if (plan.pending) {\n    const key = confirmKey(pendingSorted.indexOf(plan.validPath));\n    const choice = readAcceptedChoice(ctx.inputResponses, key);\n    if (choice === 'skip') {\n      return { skipped: true as const, path: plan.validPath };\n    }\n    if (choice !== 'delete') {\n      return {\n        failure: {\n          path: plan.validPath,\n          error: Problem.cancelled('Delete cancelled: confirmation was declined or missing', {\n            path: plan.validPath,\n          }),\n        },\n      };\n    }\n  }\n  return finalizeDeletion(plan, args, ctx);\n}\n\nasync function handleDelete(\n  args: DeleteInput,\n  ctx: ToolCtx,\n): Promise<DeleteOutput | InputRequiredResult> {\n  // Duplicate paths collapse: results are keyed by path, so a repeated entry\n  // would emit two rows for one deletion and inflate `summary.total`.\n  const paths = [...new Set(args.paths)];\n\n  // Phase 1 (no mutation): plan every path.\n  const planned = await processInParallel(\n    paths,\n    (inputPath) => planPath(inputPath, args, ctx.fs),\n    PARALLEL_CONCURRENCY,\n    ctx.signal,\n  );\n\n  const out = new Array<DeletePerPathResult | undefined>(paths.length).fill(undefined);\n  const plans: { plan: DeletePlan; index: number }[] = [];\n  for (const { index, value: r } of planned.results) {\n    if (r.status === 'fail') out[index] = { path: r.failure.path, error: r.failure.error };\n    else if (r.status === 'noop') out[index] = { path: r.deleted, value: { deleted: true } };\n    else plans.push({ plan: r.plan, index });\n  }\n  for (const { index, error } of planned.errors) {\n    out[index] = {\n      path: paths[index] ?? '(unknown)',\n      error: { code: ErrorCode.UNKNOWN, message: error.message },\n    };\n  }\n\n  // Pending set: recursive + non-empty directories, sorted and de-duplicated.\n  // `buildInputRequired` seals exactly this set into the requestState, and the\n  // retried round recomputes it from the same args so a swapped retry (accept\n  // for X, retry with Y) is rejected — the codec only proves the state was not\n  // tampered, not that it matches the current request (R9).\n  const pendingSorted = [\n    ...new Set(plans.filter((p) => p.plan.pending).map((p) => p.plan.validPath)),\n  ].sort();\n\n  if (pendingSorted.length > 0) {\n    // Round 1 returns input_required (atomic — R14: nothing deleted yet, not\n    // even the non-pending items in the same call); a retry whose verified\n    // state does not bind this pending set throws (R9) via `pendingRoundTrip`.\n    const round = await pendingRoundTrip({\n      op: 'delete',\n      pending: pendingSorted,\n      requestState: ctx.requestState,\n      clientCapabilities: ctx.clientCapabilities,\n      buildInputs: (ps) =>\n        ps.map((p, i) =>\n          choiceInput(\n            confirmKey(i),\n            `Permanently delete \"${p}\" and all its contents? This cannot be undone.`,\n            ['delete', 'skip'],\n          ),\n        ),\n    });\n    if (round !== undefined) return round;\n  }\n\n  // Phase 2 (mutation): execute deletions for every planned path.\n  const executed = await processInParallel(\n    plans,\n    ({ plan }) => executePlan(plan, args, ctx, pendingSorted),\n    PARALLEL_CONCURRENCY,\n    ctx.signal,\n  );\n\n  for (const { index, value: r } of executed.results) {\n    const slot = plans[index]?.index;\n    if (slot === undefined) continue;\n    if ('skipped' in r) {\n      out[slot] = { path: r.path, value: { deleted: false } };\n    } else if ('failure' in r) {\n      out[slot] = { path: r.failure.path, error: r.failure.error };\n    } else {\n      out[slot] = { path: r.deleted, value: { deleted: true } };\n    }\n  }\n  for (const { index, error } of executed.errors) {\n    const slot = plans[index]?.index;\n    if (slot === undefined) continue;\n    out[slot] = {\n      path: paths[slot] ?? '(unknown)',\n      error: { code: ErrorCode.UNKNOWN, message: error.message },\n    };\n  }\n\n  // Emit in the caller's input order so `results[i]` lines up with `paths[i]`\n  // the way read/stat guarantee.\n  const results: DeletePerPathResult[] = paths.map((requested, i) => {\n    const entry = out[i];\n    return (\n      entry ?? {\n        path: requested,\n        error: { code: ErrorCode.UNKNOWN, message: 'Unknown delete failure' },\n      }\n    );\n  });\n\n  const failed = results.filter((r) => r.error !== undefined).length;\n  return {\n    results,\n    summary: { total: results.length, succeeded: results.length - failed, failed },\n  };\n}\n\nexport const DELETE = defineTool({\n  name: 'delete',\n  title: 'Delete File',\n  description:\n    'Permanently delete one or more files, directories, or symlinks (max 1000 per call). This action is irreversible. ' +\n    'Pass paths: [...] — there is no single-path form. ' +\n    'Non-empty directories require recursive=true and additionally prompt the user to confirm each one, ' +\n    'so the call returns without deleting anything until that confirmation comes back; ' +\n    'a client that cannot prompt gets an error naming the alternative. ' +\n    'Workspace root directories cannot be deleted.',\n  input: DeleteInputSchema,\n  output: DeleteOutputSchema,\n  annotations: {\n    readOnlyHint: false,\n    idempotentHint: false,\n    destructiveHint: true,\n    openWorldHint: false,\n  },\n  defaultErrorCode: ErrorCode.UNKNOWN,\n  progress: (args) => ({\n    label: 'Delete',\n    subject:\n      args.paths.length === 1\n        ? basename(args.paths[0] ?? '')\n        : `${String(args.paths.length)} paths`,\n  }),\n  accessPaths: (args) => [...args.paths],\n  run: async (args, ctx) => {\n    const structured = await handleDelete(args, ctx);\n    // input_required is a return value, not a completed call: surface it\n    // verbatim so the executor short-circuits before building a CallToolResult.\n    if (isInputRequiredResult(structured)) return structured;\n    // Name every path and its outcome. The old text said \"deleted 2 paths\"\n    // without saying which two, so a partial failure was unreadable without\n    // parsing the structured half.\n    const { failed, total } = structured.summary;\n    const isError = isTotalFailure(structured.summary);\n    // A lone failure carries its reason in the text. \"delete: . FAILED (0/1 ok)\"\n    // made the model re-read structuredContent to learn it was ACCESS_DENIED;\n    // with one path there is no ambiguity about which message applies.\n    if (total === 1 && failed === 1) {\n      const only = structured.results[0];\n      return {\n        structured,\n        text: `delete: ${only?.path ?? ''} FAILED — ${only?.error?.message ?? 'unknown error'}`,\n        isError,\n      };\n    }\n    const tokens = structured.results.map((r) => {\n      const label = pathLabel(r.path);\n      if (r.error) return `${label} FAILED`;\n      return r.value?.deleted ? label : `${label} SKIPPED`;\n    });\n    const ratio = failed > 0 ? ` (${String(total - failed)}/${String(total)} ok)` : '';\n    return { structured, text: `delete: ${joinRoster(tokens)}${ratio}`, isError };\n  },\n});\n"]}
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type { InputRequiredResult } from '@modelcontextprotocol/server';\nimport { isInputRequiredResult } from '@modelcontextprotocol/server';\n\nimport { basename } from 'node:path';\n\nimport * as z from 'zod/v4';\n\nimport { processInParallel } from '../core/concurrency.ts';\nimport {\n  ErrorCode,\n  FsError,\n  isFsError,\n  isNodeError,\n  isNotFoundErrno,\n  Problem,\n} from '../core/errors.ts';\nimport { joinRoster, pathLabel } from '../core/fmt.ts';\nimport type { FileType, GuardedFileSystem } from '../core/fs.ts';\nimport {\n  confirmKey,\n  describeRefusal,\n  pendingRoundTrip,\n  readAcceptedChoice,\n} from '../core/input-required.ts';\nimport { resolveEntryType } from '../core/path-utils.ts';\nimport {\n  defaultFalseBoolean,\n  OperationSummarySchema,\n  PerFileErrorSchema,\n  RequiredPath,\n} from '../core/schema.ts';\nimport { PARALLEL_CONCURRENCY } from '../core/util.ts';\nimport { isTotalFailure } from './batch.ts';\nimport type { ToolCtx } from './define.ts';\nimport { defineTool } from './define.ts';\n\nconst DeleteInputSchema = z.strictObject({\n  paths: z\n    .array(RequiredPath)\n    .min(1)\n    .max(1000)\n    .describe('Paths to delete (max 1000); accepts files, directories, or symlinks'),\n  recursive: defaultFalseBoolean(\n    'Delete directory contents recursively (required for non-empty directories)',\n  ),\n  ignoreIfNotExists: defaultFalseBoolean(\n    'Silently succeed if a path does not exist instead of returning an error',\n  ),\n});\n\nconst DeletePerPathValueSchema = z.strictObject({\n  deleted: z.boolean().describe('True when the path was removed; false when the user chose Skip'),\n});\n\nconst DeletePerPathSchema = z.strictObject({\n  path: z.string().describe('Requested path'),\n  value: DeletePerPathValueSchema.optional().describe('Delete outcome; present on success'),\n  error: PerFileErrorSchema.optional().describe('Error details; present on failure'),\n});\n\n// One envelope for every batch tool: `read` and `stat` already answer with\n// `{ results, summary }`, so `delete` does too. The old shape switched between\n// `{ ok, path }` and `{ ok: false, failures }` depending on the outcome, which\n// left a caller parsing two schemas for one tool and never named the paths in a\n// multi-delete's text.\nconst DeleteOutputSchema = z.strictObject({\n  results: z\n    .array(DeletePerPathSchema)\n    .describe('Per-path results ordered to match the input paths'),\n  summary: OperationSummarySchema,\n});\n\ntype DeleteInput = z.infer<typeof DeleteInputSchema>;\ntype DeleteOutput = z.infer<typeof DeleteOutputSchema>;\ntype DeletePerPathResult = z.infer<typeof DeletePerPathSchema>;\n\n// Internal types for error handling\ninterface DeleteFailure {\n  path: string;\n  error: Problem;\n}\n\nconst ERR_NOT_EMPTY = new Error('Directory not empty. Set recursive: true.');\n\nfunction toDeleteFailure(path: string, error: unknown): DeleteFailure {\n  // A missing path reached here as the raw errno text (\"ENOENT: no such file or\n  // directory, lstat 'c:\\...'\"), while `stat` reported the same condition as\n  // \"Path not found\". One condition, one message — and the syscall name stays\n  // off the wire.\n  if (isNotFoundErrno(error)) {\n    return {\n      path,\n      error: Problem.fromUnknown(\n        new FsError(ErrorCode.NOT_FOUND, 'Path not found', path),\n        ErrorCode.NOT_FOUND,\n        path,\n      ),\n    };\n  }\n  if (\n    isNodeError(error) &&\n    (error.code === 'ENOTEMPTY' || error.code === 'EISDIR' || error.code === 'EEXIST')\n  ) {\n    return {\n      path,\n      error: Problem.fromUnknown(ERR_NOT_EMPTY, ErrorCode.INVALID_INPUT, path),\n    };\n  }\n  return { path, error: Problem.fromUnknown(error, ErrorCode.UNKNOWN, path) };\n}\n\ntype LstatResult = Awaited<ReturnType<GuardedFileSystem['lstat']>>;\n\n/** A path's pre-checked plan: validated, statted, and flagged if it needs confirmation. */\ninterface DeletePlan {\n  inputPath: string;\n  validPath: string;\n  itemType: FileType;\n  firstStats: LstatResult;\n  /** Recursive + non-empty directory: needs a round-trip confirmation. */\n  pending: boolean;\n}\n\ntype PlanResult =\n  | { status: 'fail'; failure: DeleteFailure }\n  | { status: 'noop'; deleted: string }\n  | { status: 'plan'; plan: DeletePlan };\n\n/**\n * Phase 1 (no mutation): validate, stat, and decide whether a path needs a\n * confirmation before anything is deleted. A pending path is a recursive\n * non-empty directory; everything else is ready to delete directly.\n */\nasync function planPath(\n  inputPath: string,\n  args: Pick<DeleteInput, 'recursive' | 'ignoreIfNotExists'>,\n  fs: Pick<GuardedFileSystem, 'pathGuard' | 'lstat' | 'hasChildrenUnchecked'>,\n): Promise<PlanResult> {\n  let validPath: string;\n  try {\n    validPath = await fs.pathGuard.validatePathForDelete(inputPath);\n  } catch (error) {\n    if (\n      args.ignoreIfNotExists &&\n      ((isFsError(error) && error.code === ErrorCode.NOT_FOUND) || isNotFoundErrno(error))\n    ) {\n      return { status: 'noop', deleted: inputPath };\n    }\n    return { status: 'fail', failure: toDeleteFailure(inputPath, error) };\n  }\n\n  if (fs.pathGuard.isAllowedRoot(validPath)) {\n    return {\n      status: 'fail',\n      // Keyed by the REQUESTED path, like every other failure here: handleDelete\n      // orders results by input path, and a resolved key would not be found for\n      // a relative request.\n      failure: {\n        path: inputPath,\n        error: Problem.accessDenied('Deleting a workspace root directory is not allowed', {\n          path: validPath,\n        }),\n      },\n    };\n  }\n\n  let firstStats: LstatResult;\n  try {\n    firstStats = await fs.lstat(validPath);\n  } catch (error) {\n    if (isNotFoundErrno(error) && args.ignoreIfNotExists) {\n      return { status: 'noop', deleted: inputPath };\n    }\n    return { status: 'fail', failure: toDeleteFailure(inputPath, error) };\n  }\n\n  const itemType = resolveEntryType(firstStats.stats);\n  let hasChildren = false;\n  if (args.recursive && itemType === 'directory') {\n    try {\n      hasChildren = await fs.hasChildrenUnchecked(validPath);\n    } catch (error) {\n      return { status: 'fail', failure: toDeleteFailure(inputPath, error) };\n    }\n  }\n  const pending = hasChildren;\n  return { status: 'plan', plan: { inputPath, validPath, itemType, firstStats, pending } };\n}\n\nasync function performDeletion(\n  validPath: string,\n  args: Pick<DeleteInput, 'recursive' | 'ignoreIfNotExists'>,\n  isDirectory: boolean,\n  fsOps: Pick<GuardedFileSystem, 'rm' | 'rmdir'>,\n): Promise<void> {\n  if (isDirectory && !args.recursive) {\n    await fsOps.rmdir(validPath);\n  } else {\n    await fsOps.rm(validPath, {\n      recursive: args.recursive,\n      force: args.ignoreIfNotExists,\n    });\n  }\n}\n\n/**\n * Phase 2 (mutation): TOCTOU re-stat against the plan's first stat, then\n * delete. A type or identity change across the confirmation gap fails closed\n * rather than deleting a replacement object the user never confirmed.\n */\nasync function finalizeDeletion(\n  plan: DeletePlan,\n  args: Pick<DeleteInput, 'recursive' | 'ignoreIfNotExists'>,\n  ctx: Pick<ToolCtx, 'fs' | 'log'>,\n): Promise<{ deleted: string } | { failure: DeleteFailure }> {\n  let currentStats: LstatResult;\n  try {\n    currentStats = await ctx.fs.lstat(plan.validPath);\n  } catch (error) {\n    if (isNotFoundErrno(error) && args.ignoreIfNotExists) {\n      return { deleted: plan.validPath };\n    }\n    return { failure: toDeleteFailure(plan.inputPath, error) };\n  }\n\n  const currentItemType = resolveEntryType(currentStats.stats);\n  // Identity comparison, not just the coarse category: a swap during the\n  // confirmation gap (delete original, create a same-named replacement) keeps\n  // the type but changes dev/ino/birthtimeMs. birthtimeMs is the primary\n  // cross-platform signal — dev/ino can read 0 on some non-POSIX drivers — so\n  // combine all three rather than trusting dev/ino alone.\n  const identityChanged =\n    plan.firstStats.stats.dev !== currentStats.stats.dev ||\n    plan.firstStats.stats.ino !== currentStats.stats.ino ||\n    plan.firstStats.stats.birthtimeMs !== currentStats.stats.birthtimeMs;\n  if (plan.itemType !== 'other' && (currentItemType !== plan.itemType || identityChanged)) {\n    return {\n      failure: {\n        path: plan.validPath,\n        error: Problem.invalidInput(\n          `Delete failed: item type changed from ${plan.itemType} to ${currentItemType} during confirmation.`,\n          { path: plan.validPath },\n        ),\n      },\n    };\n  }\n\n  try {\n    await performDeletion(plan.validPath, args, currentStats.stats.isDirectory(), ctx.fs);\n  } catch (error) {\n    return { failure: toDeleteFailure(plan.inputPath, error) };\n  }\n\n  ctx.log?.('info', `rm: ${plan.inputPath}`, 'delete');\n  return { deleted: plan.validPath };\n}\n\n/**\n * Execute one planned path on the retry round. A pending path deletes only on\n * an accepted `confirm: true`; decline, cancel, or a missing key report\n * `CANCELLED` for that path (R3 proceed, R4/R5 cancelled). A non-pending path\n * deletes directly (R14: non-pending items proceed alongside accepted ones).\n */\nasync function executePlan(\n  plan: DeletePlan,\n  args: Pick<DeleteInput, 'recursive' | 'ignoreIfNotExists'>,\n  ctx: Pick<ToolCtx, 'fs' | 'inputResponses' | 'log'>,\n  pendingSorted: readonly string[],\n): Promise<{ deleted: string } | { failure: DeleteFailure } | { skipped: true; path: string }> {\n  if (plan.pending) {\n    const key = confirmKey(pendingSorted.indexOf(plan.validPath));\n    const choice = readAcceptedChoice(ctx.inputResponses, key);\n    if (choice === 'skip') {\n      return { skipped: true as const, path: plan.validPath };\n    }\n    if (choice !== 'delete') {\n      return {\n        failure: {\n          path: plan.validPath,\n          error: Problem.cancelled(\n            `Delete cancelled: confirmation was ${describeRefusal(ctx.inputResponses, key)}`,\n            { path: plan.validPath },\n          ),\n        },\n      };\n    }\n  }\n  return finalizeDeletion(plan, args, ctx);\n}\n\nasync function handleDelete(\n  args: DeleteInput,\n  ctx: ToolCtx,\n): Promise<DeleteOutput | InputRequiredResult> {\n  // Duplicate paths collapse: results are keyed by path, so a repeated entry\n  // would emit two rows for one deletion and inflate `summary.total`.\n  const paths = [...new Set(args.paths)];\n\n  // Phase 1 (no mutation): plan every path.\n  const planned = await processInParallel(\n    paths,\n    (inputPath) => planPath(inputPath, args, ctx.fs),\n    PARALLEL_CONCURRENCY,\n    ctx.signal,\n  );\n\n  const out = new Array<DeletePerPathResult | undefined>(paths.length).fill(undefined);\n  const plans: { plan: DeletePlan; index: number }[] = [];\n  for (const { index, value: r } of planned.results) {\n    if (r.status === 'fail') out[index] = { path: r.failure.path, error: r.failure.error };\n    else if (r.status === 'noop') out[index] = { path: r.deleted, value: { deleted: true } };\n    else plans.push({ plan: r.plan, index });\n  }\n  for (const { index, error } of planned.errors) {\n    out[index] = {\n      path: paths[index] ?? '(unknown)',\n      error: { code: ErrorCode.UNKNOWN, message: error.message },\n    };\n  }\n\n  // Pending set: recursive + non-empty directories, sorted and de-duplicated.\n  // `buildInputRequired` seals exactly this set into the requestState, and the\n  // retried round recomputes it from the same args so a swapped retry (accept\n  // for X, retry with Y) is rejected — the codec only proves the state was not\n  // tampered, not that it matches the current request (R9).\n  const pendingSorted = [\n    ...new Set(plans.filter((p) => p.plan.pending).map((p) => p.plan.validPath)),\n  ].sort();\n\n  if (pendingSorted.length > 0) {\n    // Round 1 returns input_required (atomic — R14: nothing deleted yet, not\n    // even the non-pending items in the same call); a retry whose verified\n    // state does not bind this pending set throws (R9) via `pendingRoundTrip`.\n    const round = await pendingRoundTrip({\n      op: 'delete',\n      pending: pendingSorted,\n      requestState: ctx.requestState,\n      clientCapabilities: ctx.clientCapabilities,\n      serverCtx: ctx.serverCtx,\n      buildInputs: (ps) =>\n        ps.map((p, i) => ({\n          key: confirmKey(i),\n          message: `Permanently delete \"${p}\" and all its contents? This cannot be undone.`,\n          choices: ['delete', 'skip'],\n        })),\n    });\n    if (round !== undefined) return round;\n  }\n\n  // Phase 2 (mutation): execute deletions for every planned path.\n  const executed = await processInParallel(\n    plans,\n    ({ plan }) => executePlan(plan, args, ctx, pendingSorted),\n    PARALLEL_CONCURRENCY,\n    ctx.signal,\n  );\n\n  for (const { index, value: r } of executed.results) {\n    const slot = plans[index]?.index;\n    if (slot === undefined) continue;\n    if ('skipped' in r) {\n      out[slot] = { path: r.path, value: { deleted: false } };\n    } else if ('failure' in r) {\n      out[slot] = { path: r.failure.path, error: r.failure.error };\n    } else {\n      out[slot] = { path: r.deleted, value: { deleted: true } };\n    }\n  }\n  for (const { index, error } of executed.errors) {\n    const slot = plans[index]?.index;\n    if (slot === undefined) continue;\n    out[slot] = {\n      path: paths[slot] ?? '(unknown)',\n      error: { code: ErrorCode.UNKNOWN, message: error.message },\n    };\n  }\n\n  // Emit in the caller's input order so `results[i]` lines up with `paths[i]`\n  // the way read/stat guarantee.\n  const results: DeletePerPathResult[] = paths.map((requested, i) => {\n    const entry = out[i];\n    return (\n      entry ?? {\n        path: requested,\n        error: { code: ErrorCode.UNKNOWN, message: 'Unknown delete failure' },\n      }\n    );\n  });\n\n  const failed = results.filter((r) => r.error !== undefined).length;\n  return {\n    results,\n    summary: { total: results.length, succeeded: results.length - failed, failed },\n  };\n}\n\nexport const DELETE = defineTool({\n  name: 'delete',\n  title: 'Delete File',\n  description:\n    'Permanently delete one or more files, directories, or symlinks (max 1000 per call). This action is irreversible. ' +\n    'Pass paths: [...] — there is no single-path form. ' +\n    'Non-empty directories require recursive=true and additionally prompt the user to confirm each one, ' +\n    'so the call returns without deleting anything until that confirmation comes back; ' +\n    'a client that cannot prompt gets an error naming the alternative. ' +\n    'Workspace root directories cannot be deleted.',\n  input: DeleteInputSchema,\n  output: DeleteOutputSchema,\n  annotations: {\n    readOnlyHint: false,\n    idempotentHint: false,\n    destructiveHint: true,\n    openWorldHint: false,\n  },\n  defaultErrorCode: ErrorCode.UNKNOWN,\n  progress: (args) => ({\n    label: 'Delete',\n    subject:\n      args.paths.length === 1\n        ? basename(args.paths[0] ?? '')\n        : `${String(args.paths.length)} paths`,\n  }),\n  accessPaths: (args) => [...args.paths],\n  run: async (args, ctx) => {\n    const structured = await handleDelete(args, ctx);\n    // input_required is a return value, not a completed call: surface it\n    // verbatim so the executor short-circuits before building a CallToolResult.\n    if (isInputRequiredResult(structured)) return structured;\n    // Name every path and its outcome. The old text said \"deleted 2 paths\"\n    // without saying which two, so a partial failure was unreadable without\n    // parsing the structured half.\n    const { failed, total } = structured.summary;\n    const isError = isTotalFailure(structured.summary);\n    // A lone failure carries its reason in the text. \"delete: . FAILED (0/1 ok)\"\n    // made the model re-read structuredContent to learn it was ACCESS_DENIED;\n    // with one path there is no ambiguity about which message applies.\n    if (total === 1 && failed === 1) {\n      const only = structured.results[0];\n      return {\n        structured,\n        text: `delete: ${only?.path ?? ''} FAILED — ${only?.error?.message ?? 'unknown error'}`,\n        isError,\n      };\n    }\n    const tokens = structured.results.map((r) => {\n      const label = pathLabel(r.path);\n      if (r.error) return `${label} FAILED`;\n      return r.value?.deleted ? label : `${label} SKIPPED`;\n    });\n    const ratio = failed > 0 ? ` (${String(total - failed)}/${String(total)} ok)` : '';\n    return { structured, text: `delete: ${joinRoster(tokens)}${ratio}`, isError };\n  },\n});\n"]}

package/dist/tools/diff.d.ts

@@ -1,2 +1,2 @@
-export declare const DIFF: import("./define.js").DefinedTool;
+export declare const DIFF: import("./define.ts").DefinedTool;
 //# sourceMappingURL=diff.d.ts.map

package/dist/tools/diff.d.ts.map

@@ -1 +1 @@
-{"version":3,"file":"diff.d.ts","sourceRoot":"","sources":["../../src/tools/diff.ts"],"names":[],"mappings":"AAgGA,eAAO,MAAM,IAAI,mCAoBf,CAAC"}
+{"version":3,"file":"diff.d.ts","sourceRoot":"","sources":["../../src/tools/diff.ts"],"names":[],"mappings":"AAyDA,eAAO,MAAM,IAAI,mCAoBf,CAAC"}

package/dist/tools/diff.js

@@ -1,10 +1,9 @@
 import { basename } from 'node:path';
 import * as z from 'zod/v4';
 import { createTwoFilesPatch } from 'diff';
-import { computeDiffStats } from '../core/diff.js';
-import { NonNegInt, PositiveInt, RequiredPath } from '../core/schema.js';
-import { putJsonResource } from '../core/store.js';
-import { defineTool } from './define.js';
+import { computeDiffStats } from "../core/diff.js";
+import { NonNegInt, PositiveInt, RequiredPath } from "../core/schema.js";
+import { defineTool } from "./define.js";
 const DiffInputSchema = z.strictObject({
     a: RequiredPath.describe('First file to compare'),
     b: RequiredPath.describe('Second file to compare'),
@@ -15,14 +14,9 @@ const DiffInputSchema = z.strictObject({
 const DiffOutputSchema = z.strictObject({
     a: z.string().describe('Resolved absolute path of the first file'),
     b: z.string().describe('Resolved absolute path of the second file'),
-    // The unified diff itself rides the text content block; `resourceUri` holds
-    // the full copy for a client that wants to fetch it separately.
+    // The unified diff itself rides the text content block.
     linesAdded: NonNegInt.describe('Number of lines added'),
     linesRemoved: NonNegInt.describe('Number of lines removed'),
-    resourceUri: z
-        .string()
-        .optional()
-        .describe('URI to the full diff in the resource store (present when resource store is enabled)'),
 });
 async function handleDiff(args, ctx) {
     const [{ validPath: validA, content: contentA }, { validPath: validB, content: contentB }] = await Promise.all([
@@ -33,35 +27,11 @@ async function handleDiff(args, ctx) {
     // (the { callback } option does not fire on this version — verified).
     const diffText = createTwoFilesPatch(basename(validA), basename(validB), contentA, contentB, 'a', 'b', { context: args.context });
     const { linesAdded, linesRemoved } = computeDiffStats(contentA, contentB);
-    let resourceUri;
-    let link;
-    // Identical files: the diff has no hunks, so externalizing it buys the client
-    // a link to nothing and burns a store slot the next real diff wants.
-    if (ctx.resourceStore && linesAdded + linesRemoved > 0) {
-        const result = putJsonResource(ctx.resourceStore, 'diff', {
-            diff: diffText,
-            linesAdded,
-            linesRemoved,
-            a: validA,
-            b: validB,
-        });
-        resourceUri = result.entry.uri;
-        link = result.link;
-    }
-    // The diff shipped three times: this text block, `structured.diff`, and the
-    // externalized store entry. The text block is the one a model reads, so the
-    // structured copy goes — `resourceUri` still holds the full diff for a client
-    // that wants to fetch it separately.
+    // The text block is the one copy of the diff; a model reads that, and a
+    // structured duplicate or a store entry would only ship the same bytes again.
     return {
-        structured: {
-            a: validA,
-            b: validB,
-            linesAdded,
-            linesRemoved,
-            ...(resourceUri !== undefined ? { resourceUri } : {}),
-        },
+        structured: { a: validA, b: validB, linesAdded, linesRemoved },
         text: diffText,
-        ...(link !== undefined ? { resources: [link] } : {}),
     };
 }
 export const DIFF = defineTool({