@isaacriehm/cairn-core 0.8.0 → 0.9.2

package/dist/init/phases/5-preflight.js

@@ -0,0 +1,244 @@
+/**
+ * Phase 5-preflight — count the units the long Haiku phases will
+ * process (markdown paragraphs, essay-class comment blocks, rule
+ * sections, jaccard pair estimate), then compute an aggregate ETA
+ * by multiplying counts against the per-machine calibration cache.
+ *
+ * No operator input. Always advances. Output is consumed by the
+ * cairn-adopt skill which renders a single banner immediately after
+ * this phase so the operator sees an honest pre-commit estimate
+ * before the long phases (7-topic-index → 10-rules-merge) start.
+ *
+ * Pilot scoping is gone — adoption always covers the whole repo.
+ * The operator can narrow surface area post-adoption via
+ * `cairn scope` if desired.
+ */
+import { existsSync, readFileSync, statSync } from "node:fs";
+import { extname, join } from "node:path";
+import { walkFs } from "@isaacriehm/cairn-state";
+import { walkSourceComments } from "../source-comments/walker.js";
+import { discoverRuleSources } from "../rules-merge/discover.js";
+import { parseRuleSections } from "../rules-merge/parse-sections.js";
+import { readCalibration } from "../eta-calibration.js";
+import { advancePhase, isSelfAdoptState } from "./orchestrator.js";
+/** Hard upper bound on jaccard pair-judge calls (matches phase 7 cap). */
+const JACCARD_PAIR_CAP = 200;
+/** Skip dirs for the markdown walk — match the source walker's set. */
+const DOC_SKIP_DIRS = new Set([
+    ".git",
+    "node_modules",
+    "dist",
+    "build",
+    "target",
+    "out",
+    "vendor",
+    ".venv",
+    ".direnv",
+    ".cache",
+    "coverage",
+    ".next",
+    ".turbo",
+    ".cairn",
+    ".archive",
+]);
+export async function runPhase5Preflight(state) {
+    if (isSelfAdoptState(state)) {
+        const skipped = {
+            units: emptyUnits(),
+            eta: zeroEta(),
+            bannerLines: ["Self-adopt mode — long phases skipped, no ETA estimate."],
+            skipped: "self-adopt",
+        };
+        const next = {
+            ...state,
+            outputs: { ...state.outputs, "5-preflight": skipped },
+        };
+        return {
+            status: "complete",
+            nextPhase: "6-brand",
+            state: advancePhase(next),
+        };
+    }
+    const units = countUnits(state.repoRoot);
+    const eta = estimateEta(units);
+    const bannerLines = renderBanner(units, eta);
+    const out = { units, eta, bannerLines };
+    const next = {
+        ...state,
+        outputs: { ...state.outputs, "5-preflight": out },
+    };
+    return {
+        status: "complete",
+        nextPhase: "6-brand",
+        state: advancePhase(next),
+    };
+}
+function emptyUnits() {
+    return {
+        docFiles: 0,
+        docParagraphs: 0,
+        sourceFiles: 0,
+        essayBlocks: 0,
+        ruleH2Sections: 0,
+        jaccardPairsEstimate: 0,
+    };
+}
+function zeroEta() {
+    return {
+        perPhaseSeconds: {
+            "7-topic-index": 0,
+            "8-docs-ingest": 0,
+            "9-source-comments": 0,
+            "10-rules-merge": 0,
+        },
+        totalSeconds: 0,
+        totalSecondsHigh: 0,
+    };
+}
+function countUnits(repoRoot) {
+    const docs = countDocs(repoRoot);
+    const source = walkSourceComments({ repoRoot });
+    const rules = countRuleH2(repoRoot);
+    // Conservative jaccard pair estimate — phase 7 caps at 200 and the
+    // hit rate on monorepos saturates quickly. Below 50 paragraphs, every
+    // pair counts; above, assume the cap.
+    const jaccardPairsEstimate = docs.paragraphs <= 50
+        ? (docs.paragraphs * (docs.paragraphs - 1)) / 2
+        : JACCARD_PAIR_CAP;
+    return {
+        docFiles: docs.files,
+        docParagraphs: docs.paragraphs,
+        sourceFiles: source.fileCountByLang
+            ? Object.values(source.fileCountByLang).reduce((a, b) => a + b, 0)
+            : source.files.length,
+        essayBlocks: source.blocks.length,
+        ruleH2Sections: rules,
+        jaccardPairsEstimate: Math.min(JACCARD_PAIR_CAP, Math.round(jaccardPairsEstimate)),
+    };
+}
+function countDocs(repoRoot) {
+    let files = 0;
+    let paragraphs = 0;
+    // Repo-root markdown (README.md, CHANGELOG.md, AGENTS.md, etc.).
+    for (const name of safeReaddir(repoRoot)) {
+        if (!isMarkdown(name))
+            continue;
+        const abs = join(repoRoot, name);
+        const counts = countMarkdownFile(abs);
+        if (counts !== null) {
+            files += 1;
+            paragraphs += counts.paragraphs;
+        }
+    }
+    // docs/ subtree.
+    const docsDir = join(repoRoot, "docs");
+    if (existsSync(docsDir)) {
+        walkFs({
+            dir: docsDir,
+            repoRoot,
+            onDir: (_rel, _abs, ent) => {
+                if (DOC_SKIP_DIRS.has(ent.name))
+                    return false;
+                return true;
+            },
+            onFile: (_rel, abs, ent) => {
+                if (!isMarkdown(ent.name))
+                    return;
+                const counts = countMarkdownFile(abs);
+                if (counts !== null) {
+                    files += 1;
+                    paragraphs += counts.paragraphs;
+                }
+            },
+        });
+    }
+    return { files, paragraphs };
+}
+function isMarkdown(name) {
+    const ext = extname(name).toLowerCase();
+    return ext === ".md" || ext === ".mdx";
+}
+function safeReaddir(dir) {
+    try {
+        const ents = require("node:fs").readdirSync(dir);
+        return ents;
+    }
+    catch {
+        return [];
+    }
+}
+function countMarkdownFile(absPath) {
+    try {
+        const stat = statSync(absPath);
+        // Skip giant files — phase 8 skips them too in practice (over a few
+        // MB the embedding cost dominates and the operator usually wants
+        // them excluded).
+        if (stat.size > 2 * 1024 * 1024)
+            return null;
+        const body = readFileSync(absPath, "utf8");
+        // Paragraph = run of non-empty lines, separated by blank line(s).
+        const paragraphs = body
+            .split(/\n\s*\n/)
+            .map((p) => p.trim())
+            .filter((p) => p.length > 0).length;
+        return { paragraphs };
+    }
+    catch {
+        return null;
+    }
+}
+function countRuleH2(repoRoot) {
+    const sources = discoverRuleSources(repoRoot);
+    let total = 0;
+    for (const src of sources) {
+        try {
+            const body = readFileSync(src.absPath, "utf8");
+            const sections = parseRuleSections(body);
+            // Phase 10 issues one Haiku call per H2 (level 2). H3 sections
+            // ride along inside their parent H2's classification, so they
+            // don't add to the call count.
+            total += sections.filter((s) => s.level === 2).length;
+        }
+        catch {
+            // Unreadable rule file — skip silently; phase 10 will surface it.
+        }
+    }
+    return total;
+}
+function estimateEta(units) {
+    const cal = readCalibration();
+    const perPhaseSeconds = {
+        "7-topic-index": units.jaccardPairsEstimate * cal.phases["7-topic-index"].secondsPerUnit,
+        "8-docs-ingest": units.docParagraphs * cal.phases["8-docs-ingest"].secondsPerUnit,
+        "9-source-comments": units.essayBlocks * cal.phases["9-source-comments"].secondsPerUnit,
+        "10-rules-merge": units.ruleH2Sections * cal.phases["10-rules-merge"].secondsPerUnit,
+    };
+    const totalSeconds = perPhaseSeconds["7-topic-index"] +
+        perPhaseSeconds["8-docs-ingest"] +
+        perPhaseSeconds["9-source-comments"] +
+        perPhaseSeconds["10-rules-merge"];
+    return {
+        perPhaseSeconds,
+        totalSeconds,
+        totalSecondsHigh: totalSeconds * 1.5,
+    };
+}
+function renderBanner(units, eta) {
+    const totalLow = formatDuration(eta.totalSeconds);
+    const totalHigh = formatDuration(eta.totalSecondsHigh);
+    const lines = [];
+    lines.push(`Indexing whole repo (${units.sourceFiles} source files, ${units.essayBlocks} essay-class comments, ${units.docFiles} docs / ${units.docParagraphs} paragraphs, ${units.ruleH2Sections} rule sections).`);
+    lines.push(`Estimated time: ${totalLow}–${totalHigh}. Live ETA on statusline. /exit safe — SessionStart resumes.`);
+    return lines;
+}
+function formatDuration(seconds) {
+    if (seconds < 60)
+        return `${Math.max(1, Math.round(seconds))}s`;
+    const mins = Math.round(seconds / 60);
+    if (mins < 60)
+        return `${mins}m`;
+    const hours = Math.floor(mins / 60);
+    const remMins = mins % 60;
+    return remMins === 0 ? `${hours}h` : `${hours}h${remMins}m`;
+}
+//# sourceMappingURL=5-preflight.js.map

package/dist/init/phases/5-preflight.js.map

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package/dist/init/phases/7-topic-index.d.ts

@@ -13,6 +13,12 @@ export interface TopicIndexPhaseOutput {
     verbatim_collisions: number;
     semantic_collisions: number;
     judge_calls: number;
+    /** Subset of `judge_calls` served from the on-disk Claude cache (no plan-quota burn). */
+    judge_calls_cached: number;
+    /** Subset of `judge_calls` that spawned a fresh `claude --print` subprocess. */
+    judge_calls_fresh: number;
+    /** Judge calls that threw (cache write skipped, breaker counter incremented). */
+    judge_calls_errors: number;
     unresolved_ambiguous: number;
     topic_count: number;
     topic_index_path: string;

package/dist/init/phases/7-topic-index.js

@@ -9,17 +9,30 @@
  */
 import { logger } from "../../logger.js";
 import { buildTopicIndex } from "../topic-index/index.js";
+import { recordSample } from "../eta-calibration.js";
 import { advancePhase } from "./orchestrator.js";
 const log = logger("init.phases.7-topic-index");
 export async function runPhase7TopicIndex(state) {
+    const startedAt = performance.now();
     try {
         const result = await buildTopicIndex({ repoRoot: state.repoRoot });
+        const durationMs = Math.round(performance.now() - startedAt);
+        if (result.judgeCalls > 0) {
+            recordSample({
+                phase: "7-topic-index",
+                units: result.judgeCalls,
+                durationMs,
+            });
+        }
         const topicCount = Object.keys(result.topicIndex.topics).length;
         const out = {
             block_count: result.blockCount,
             verbatim_collisions: result.verbatimCollisions,
             semantic_collisions: result.semanticCollisions,
             judge_calls: result.judgeCalls,
+            judge_calls_cached: result.judgeCached,
+            judge_calls_fresh: result.judgeFresh,
+            judge_calls_errors: result.judgeErrors,
             unresolved_ambiguous: result.unresolvedAmbiguous,
             topic_count: topicCount,
             topic_index_path: result.topicIndexPath,

package/dist/init/phases/7-topic-index.js.map

@@ -1 +1 @@
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package/dist/init/phases/8-docs-ingest.d.ts

@@ -1,10 +1,11 @@
 /**
- * Phase 8-docs-ingest — staged docs ingestion.
+ * Phase 8-docs-ingest — collapsed to a no-op in v0.9.0.
  *
- * Wraps `runDocsIngestion`; no operator input. The skill driver
- * surfaces the resulting `decsWritten.length` (drafts in `_inbox/`) in
- * the post-init summary so the operator sees how many docs-source
- * decision drafts landed for triage.
+ * The unified curator pipeline (Phase 9a/9b/9c) now subsumes docs
+ * ingestion alongside source comments and rule-file sections. This
+ * runner stays registered so resumes from old `init-state.json` files
+ * still flow through the state machine — it stamps a marker output
+ * and advances to `9a-walker`.
  */
 import type { PhaseResult, PhaseState } from "./types.js";
 export declare function runPhase8DocsIngest(state: PhaseState): Promise<PhaseResult>;

package/dist/init/phases/8-docs-ingest.js

@@ -1,62 +1,23 @@
 /**
- * Phase 8-docs-ingest — staged docs ingestion.
+ * Phase 8-docs-ingest — collapsed to a no-op in v0.9.0.
  *
- * Wraps `runDocsIngestion`; no operator input. The skill driver
- * surfaces the resulting `decsWritten.length` (drafts in `_inbox/`) in
- * the post-init summary so the operator sees how many docs-source
- * decision drafts landed for triage.
+ * The unified curator pipeline (Phase 9a/9b/9c) now subsumes docs
+ * ingestion alongside source comments and rule-file sections. This
+ * runner stays registered so resumes from old `init-state.json` files
+ * still flow through the state machine — it stamps a marker output
+ * and advances to `9a-walker`.
  */
-import { runDocsIngestion } from "../ingest-docs.js";
-import { clearProgress, writeProgress } from "../progress.js";
-import { advancePhase, isSelfAdoptState } from "./orchestrator.js";
+import { advancePhase } from "./orchestrator.js";
 export async function runPhase8DocsIngest(state) {
-    if (isSelfAdoptState(state)) {
-        const skipped = { skipped: "self-adopt" };
-        const next = {
-            ...state,
-            outputs: { ...state.outputs, "8-docs-ingest": skipped },
-        };
-        return {
-            status: "complete",
-            nextPhase: "9-source-comments",
-            state: advancePhase(next),
-        };
-    }
-    const startedAt = Date.now();
-    try {
-        const result = await runDocsIngestion({
-            repoRoot: state.repoRoot,
-            onChunkProgress: (row) => {
-                writeProgress(state.repoRoot, {
-                    phase: `8-docs-ingest:${row.stage}`,
-                    batch: row.entriesDone,
-                    total: row.totalEntries,
-                    startedAt,
-                });
-            },
-        });
-        clearProgress(state.repoRoot);
-        const next = {
-            ...state,
-            outputs: { ...state.outputs, "8-docs-ingest": result },
-        };
-        return {
-            status: "complete",
-            nextPhase: "9-source-comments",
-            state: advancePhase(next),
-        };
-    }
-    catch (err) {
-        clearProgress(state.repoRoot);
-        return {
-            status: "error",
-            error: {
-                code: "docs-ingest-failed",
-                message: "Docs ingestion pipeline failed",
-                detail: err instanceof Error ? err.stack ?? err.message : String(err),
-            },
-            state,
-        };
-    }
+    const out = { skipped: "merged-into-9-curator" };
+    const next = {
+        ...state,
+        outputs: { ...state.outputs, "8-docs-ingest": out },
+    };
+    return {
+        status: "complete",
+        nextPhase: "9a-walker",
+        state: advancePhase(next),
+    };
 }
 //# sourceMappingURL=8-docs-ingest.js.map

package/dist/init/phases/8-docs-ingest.js.map

@@ -1 +1 @@
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package/dist/init/phases/9a-walker.d.ts

@@ -0,0 +1,15 @@
+/**
+ * Phase 9a-walker — unified curator corpus walker (v0.9.0).
+ *
+ * Stub. Real implementation in a follow-up commit walks source
+ * comments + doc paragraphs + rule sections, applies the regex
+ * pre-filter from `curator/regex-prefilter.ts`, packs surviving
+ * records into shards capped at 120k input tokens, and writes
+ * `corpus.jsonl` + `shards.json` to `.cairn/init/curator/`.
+ *
+ * The cairn-adopt skill reads `shards.json` after this phase
+ * completes and dispatches `cairn:curator-map` subagents in parallel
+ * rounds of 4.
+ */
+import type { PhaseResult, PhaseState } from "./types.js";
+export declare function runPhase9aWalker(state: PhaseState): Promise<PhaseResult>;

package/dist/init/phases/9a-walker.js

@@ -0,0 +1,63 @@
+/**
+ * Phase 9a-walker — unified curator corpus walker (v0.9.0).
+ *
+ * Stub. Real implementation in a follow-up commit walks source
+ * comments + doc paragraphs + rule sections, applies the regex
+ * pre-filter from `curator/regex-prefilter.ts`, packs surviving
+ * records into shards capped at 120k input tokens, and writes
+ * `corpus.jsonl` + `shards.json` to `.cairn/init/curator/`.
+ *
+ * The cairn-adopt skill reads `shards.json` after this phase
+ * completes and dispatches `cairn:curator-map` subagents in parallel
+ * rounds of 4.
+ */
+import { advancePhase, isSelfAdoptState } from "./orchestrator.js";
+export async function runPhase9aWalker(state) {
+    if (isSelfAdoptState(state)) {
+        const skipped = { skipped: "self-adopt" };
+        const next = {
+            ...state,
+            outputs: { ...state.outputs, "9a-walker": skipped },
+        };
+        return {
+            status: "complete",
+            nextPhase: "9b-curate",
+            state: advancePhase(next),
+        };
+    }
+    // Real walker plugged in by `runCuratorWalker`.
+    try {
+        const { runCuratorWalker } = await import("../curator/walker.js");
+        const walker = await runCuratorWalker({ repoRoot: state.repoRoot });
+        const out = {
+            corpus_path: walker.corpus_path,
+            shards_path: walker.shards_path,
+            records_total: walker.records_total,
+            records_by_kind: walker.records_by_kind,
+            dropped: walker.dropped,
+            shards: walker.shards,
+            total_input_tokens_estimate: walker.total_input_tokens_estimate,
+        };
+        const next = {
+            ...state,
+            outputs: { ...state.outputs, "9a-walker": out },
+        };
+        return {
+            status: "complete",
+            nextPhase: "9b-curate",
+            state: advancePhase(next),
+        };
+    }
+    catch (err) {
+        return {
+            status: "error",
+            error: {
+                code: "9a-walker-failed",
+                message: "Curator walker failed",
+                detail: err instanceof Error ? err.stack ?? err.message : String(err),
+            },
+            state,
+        };
+    }
+}
+//# sourceMappingURL=9a-walker.js.map

package/dist/init/phases/9a-walker.js.map

@@ -0,0 +1 @@
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package/dist/init/phases/9b-curate.d.ts

@@ -0,0 +1,19 @@
+/**
+ * Phase 9b-curate — skill-driven map+reduce dispatch (v0.9.0).
+ *
+ * The actual map+reduce work runs in the cairn-adopt skill. The skill
+ * reads `shards.json` from Phase 9a, spawns `cairn:curator-map`
+ * subagents per shard in parallel rounds of 4, then spawns one
+ * `cairn:curator-reduce` subagent over the aggregated candidates,
+ * writing the final synthesized entries to
+ * `.cairn/init/curator/final.jsonl`.
+ *
+ * This MCP runner is the state-machine bookkeeper for that work — it
+ * confirms `final.jsonl` exists, counts entries, advances to 9c-emit.
+ * If the skill calls this runner before writing `final.jsonl`, the
+ * runner errors so the operator sees a clear "skill orchestration
+ * skipped" signal rather than 9c-emit silently emitting zero entries.
+ */
+import type { PhaseResult, PhaseState } from "./types.js";
+export declare const CURATOR_FINAL_PATH: string;
+export declare function runPhase9bCurate(state: PhaseState): Promise<PhaseResult>;

package/dist/init/phases/9b-curate.js

@@ -0,0 +1,79 @@
+/**
+ * Phase 9b-curate — skill-driven map+reduce dispatch (v0.9.0).
+ *
+ * The actual map+reduce work runs in the cairn-adopt skill. The skill
+ * reads `shards.json` from Phase 9a, spawns `cairn:curator-map`
+ * subagents per shard in parallel rounds of 4, then spawns one
+ * `cairn:curator-reduce` subagent over the aggregated candidates,
+ * writing the final synthesized entries to
+ * `.cairn/init/curator/final.jsonl`.
+ *
+ * This MCP runner is the state-machine bookkeeper for that work — it
+ * confirms `final.jsonl` exists, counts entries, advances to 9c-emit.
+ * If the skill calls this runner before writing `final.jsonl`, the
+ * runner errors so the operator sees a clear "skill orchestration
+ * skipped" signal rather than 9c-emit silently emitting zero entries.
+ */
+import { existsSync, readFileSync } from "node:fs";
+import { join } from "node:path";
+import { advancePhase, isSelfAdoptState } from "./orchestrator.js";
+export const CURATOR_FINAL_PATH = join(".cairn", "init", "curator", "final.jsonl");
+export async function runPhase9bCurate(state) {
+    if (isSelfAdoptState(state)) {
+        const skipped = { skipped: "self-adopt" };
+        const next = {
+            ...state,
+            outputs: { ...state.outputs, "9b-curate": skipped },
+        };
+        return {
+            status: "complete",
+            nextPhase: "9c-emit",
+            state: advancePhase(next),
+        };
+    }
+    const finalAbs = join(state.repoRoot, CURATOR_FINAL_PATH);
+    if (!existsSync(finalAbs)) {
+        return {
+            status: "error",
+            error: {
+                code: "9b-curate-missing-final",
+                message: "Curator skill orchestration did not write final.jsonl. The cairn-adopt skill must dispatch curator-map + curator-reduce subagents before invoking 9b-curate.",
+                detail: `Expected file at ${CURATOR_FINAL_PATH}`,
+            },
+            state,
+        };
+    }
+    let entries = 0;
+    try {
+        const text = readFileSync(finalAbs, "utf8");
+        for (const line of text.split("\n")) {
+            if (line.trim().length > 0)
+                entries += 1;
+        }
+    }
+    catch (err) {
+        return {
+            status: "error",
+            error: {
+                code: "9b-curate-read-failed",
+                message: "Failed to read curator final.jsonl",
+                detail: err instanceof Error ? err.stack ?? err.message : String(err),
+            },
+            state,
+        };
+    }
+    const out = {
+        final_path: CURATOR_FINAL_PATH,
+        final_entries: entries,
+    };
+    const next = {
+        ...state,
+        outputs: { ...state.outputs, "9b-curate": out },
+    };
+    return {
+        status: "complete",
+        nextPhase: "9c-emit",
+        state: advancePhase(next),
+    };
+}
+//# sourceMappingURL=9b-curate.js.map

package/dist/init/phases/9b-curate.js.map

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package/dist/init/phases/9c-emit.d.ts

@@ -0,0 +1,13 @@
+/**
+ * Phase 9c-emit — deterministic curator emit (v0.9.0).
+ *
+ * Reads `.cairn/init/curator/final.jsonl`, validates each entry via
+ * the strict validators in `curator/validate.ts`, and writes
+ * surviving entries directly to `.cairn/ground/decisions/<id>.md`
+ * (DEC) or `.cairn/ground/invariants/<id>.md` (INV) with
+ * `status: accepted` / `status: active`. Invalid entries drop
+ * silently with a counter — operator's "auto-accept" directive in
+ * the curator plan means the bar is hard, not deferred to inbox.
+ */
+import type { PhaseResult, PhaseState } from "./types.js";
+export declare function runPhase9cEmit(state: PhaseState): Promise<PhaseResult>;