@isaacriehm/cairn-core 0.7.0 → 0.7.1

package/dist/gc/canary.js

@@ -4,39 +4,31 @@
  *
  * Two checks run after the batch lands locally and BEFORE any push:
  *
- *   1. Manifest rebuild + ground-zone consistency.
- *      Re-run `buildManifest` against the post-batch tree. If it throws or
- *      produces zero entries (the canonical zone went empty), the batch
- *      broke ground.
- *
- *   2. workflow.md sanity — file exists, is readable, has parseable YAML
- *      frontmatter (the project-extension block that `sensors/runner.ts`
- *      reads via Object.keys). Catches a GC batch that mangled the
- *      frontmatter or removed the file entirely.
- *
- * Both checks are pure-mechanical — no LLM burn — and run in milliseconds.
- *
- * The earlier prompt-template re-render check was retired with the
- * orchestrator (the workflow.md body no longer carries Liquid-style
- * tokens; cairn-direction writes spec.tightened.md per task instead).
+ *   1. Manifest rebuild — verifies all files in `.cairn/ground/` are still
+ *      valid, parseable, and linked.
+ *   2. workflow.md check — verifies the project config hasn't been corrupted.
  */
 import { existsSync, readFileSync } from "node:fs";
 import { join } from "node:path";
 import { parse as parseYaml } from "yaml";
-import { buildManifest } from "../ground/manifest.js";
-export function verifyBatchCanary(opts) {
+import { writeManifest } from "@isaacriehm/cairn-state";
+/**
+ * Verifies the monorepo is still healthy after a GC batch lands.
+ */
+export function runGcCanary(opts) {
     const failures = [];
-    // 1. Manifest rebuild (canonical-zone integrity).
     let manifestFiles = 0;
+    // 1. Manifest rebuild.
     try {
-        const manifest = buildManifest({ repoRoot: opts.repoRoot, generator: "gc.canary" });
-        manifestFiles = manifest.files.length;
+        const result = writeManifest({ repoRoot: opts.repoRoot });
+        manifestFiles = result.manifest.files.length;
         if (manifestFiles === 0) {
-            failures.push("manifest rebuild produced zero canonical-zone files");
+            failures.push("manifest is empty — ground state likely wiped");
         }
     }
     catch (err) {
-        failures.push(`manifest rebuild threw: ${err.message}`);
+        const message = err instanceof Error ? err.message : String(err);
+        failures.push(`manifest rebuild threw: ${message}`);
     }
     // 2. workflow.md sanity — file present, readable, frontmatter parseable.
     const workflowPath = join(opts.repoRoot, ".cairn", "config", "workflow.md");
@@ -49,7 +41,8 @@ export function verifyBatchCanary(opts) {
             body = readFileSync(workflowPath, "utf8");
         }
         catch (err) {
-            failures.push(`workflow.md unreadable post-batch: ${err.message}`);
+            const message = err instanceof Error ? err.message : String(err);
+            failures.push(`workflow.md unreadable post-batch: ${message}`);
         }
         if (body.length > 0) {
             const fmMatch = body.match(/^---\n([\s\S]*?)\n---/);
@@ -64,7 +57,8 @@ export function verifyBatchCanary(opts) {
                     }
                 }
                 catch (err) {
-                    failures.push(`workflow.md frontmatter parse failed: ${err.message}`);
+                    const message = err instanceof Error ? err.message : String(err);
+                    failures.push(`workflow.md frontmatter parse failed: ${message}`);
                 }
             }
         }

package/dist/gc/canary.js.map

@@ -1 +1 @@
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package/dist/gc/citation-integrity.d.ts

@@ -4,21 +4,18 @@
  * Walks every source file in the repo and scans for cairn citations
  * (§INV invariants, §DEC decisions, TODO(TSK-...) linked todos). Each
  * citation is resolved against the appropriate source of truth:
- *   - §INV-NNNN → invariants.ledger.yaml. Missing → orphaned. superseded_by
- *                  set → superseded citation.
- *   - §DEC-<N>  → decisions.ledger.yaml. Missing → orphaned. status:
- *                  superseded / archived → superseded citation.
- *   - TODO(TSK-<id>) → tasks/{active,done}/<id>/. Missing → orphan; "done"
- *                       isn't a finding (TODO will be removed when the agent
- *                       gets to it; flagging is noisy).
+ *
+ *   - §INV-NNNN  resolved against `invariants.ledger.yaml` (Active/Superseded)
+ *   - §DEC-NNNN  resolved against `decisions.ledger.yaml` (Accepted/Superseded)
+ *   - TODO(TSK-) resolved against `tasks/{active,done}/`
+ *
+ * Findings surface orphaned citations (target missing) or stale citations
+ * (target superseded by a newer version).
  */
 import type { GcFinding } from "./types.js";
-export interface CitationIntegrityOptions {
+/** Run citation-integrity against all source files in repoRoot. */
+export declare function runCitationIntegrity(opts: {
     repoRoot: string;
-    /** Cap on file size to scan (bytes). Default 256 KB. */
-    maxFileBytes?: number;
-}
-export interface CitationIntegrityResult {
+}): Promise<{
     findings: GcFinding[];
-}
-export declare function runCitationIntegrity(opts: CitationIntegrityOptions): CitationIntegrityResult;
+}>;

package/dist/gc/citation-integrity.js

@@ -4,28 +4,25 @@
  * Walks every source file in the repo and scans for cairn citations
  * (§INV invariants, §DEC decisions, TODO(TSK-...) linked todos). Each
  * citation is resolved against the appropriate source of truth:
- *   - §INV-NNNN → invariants.ledger.yaml. Missing → orphaned. superseded_by
- *                  set → superseded citation.
- *   - §DEC-<N>  → decisions.ledger.yaml. Missing → orphaned. status:
- *                  superseded / archived → superseded citation.
- *   - TODO(TSK-<id>) → tasks/{active,done}/<id>/. Missing → orphan; "done"
- *                       isn't a finding (TODO will be removed when the agent
- *                       gets to it; flagging is noisy).
+ *
+ *   - §INV-NNNN  resolved against `invariants.ledger.yaml` (Active/Superseded)
+ *   - §DEC-NNNN  resolved against `decisions.ledger.yaml` (Accepted/Superseded)
+ *   - TODO(TSK-) resolved against `tasks/{active,done}/`
+ *
+ * Findings surface orphaned citations (target missing) or stale citations
+ * (target superseded by a newer version).
  */
-import { existsSync, readFileSync, statSync } from "node:fs";
+import { existsSync, readFileSync } from "node:fs";
 import { join } from "node:path";
 import { parse as parseYaml } from "yaml";
-import { buildDecisionsLedger, buildInvariantsLedger } from "../ground/index.js";
-import { decisionsLedgerPath, invariantsLedgerPath } from "../ground/paths.js";
-import { scanCitations } from "../hooks/post-tool-use/citation-scanner.js";
+import { buildDecisionsLedger, buildInvariantsLedger, decisionsLedgerPath, invariantsLedgerPath, } from "@isaacriehm/cairn-state";
 import { walkSourceTree } from "./walk-source.js";
+import { z } from "zod";
 const PASS_ID = "citation-integrity";
-const TEXT_EXTS = new Set([
-    ".ts", ".tsx", ".js", ".jsx", ".mjs", ".cjs",
-    ".py", ".rb", ".go", ".rs", ".java", ".c", ".cc", ".cpp", ".h", ".hpp",
-    ".swift", ".kt", ".sh", ".bash", ".zsh",
-    ".sql", ".html", ".vue", ".svelte", ".css", ".scss",
-]);
+const LedgerEntrySchema = z.object({
+    id: z.string(),
+    superseded_by: z.string().nullable().optional(),
+}).passthrough();
 function loadInvariants(repoRoot) {
     const active = new Set();
     for (const e of buildInvariantsLedger({ repoRoot })) {
@@ -35,24 +32,22 @@ function loadInvariants(repoRoot) {
     const path = invariantsLedgerPath(repoRoot);
     if (!existsSync(path))
         return { active, superseded };
-    let parsed;
     try {
-        parsed = parseYaml(readFileSync(path, "utf8"));
+        const raw = readFileSync(path, "utf8");
+        const parsed = parseYaml(raw);
+        const result = z.array(LedgerEntrySchema).safeParse(parsed);
+        if (result.success) {
+            for (const e of result.data) {
+                const id = e.id;
+                const supBy = e.superseded_by ?? null;
+                if (supBy !== null && supBy.length > 0) {
+                    superseded.set(id, supBy);
+                }
+            }
+        }
     }
     catch {
-        return { active, superseded };
-    }
-    if (!Array.isArray(parsed))
-        return { active, superseded };
-    for (const entry of parsed) {
-        if (typeof entry !== "object" || entry === null)
-            continue;
-        const e = entry;
-        const id = typeof e["id"] === "string" ? e["id"] : null;
-        const supBy = typeof e["superseded_by"] === "string" ? e["superseded_by"] : null;
-        if (id !== null && supBy !== null && supBy.length > 0) {
-            superseded.set(id, supBy);
-        }
+        /* ignore */
     }
     return { active, superseded };
 }
@@ -65,52 +60,48 @@ function loadDecisions(repoRoot) {
     const path = decisionsLedgerPath(repoRoot);
     if (!existsSync(path))
         return { active, superseded };
-    let parsed;
     try {
-        parsed = parseYaml(readFileSync(path, "utf8"));
+        const raw = readFileSync(path, "utf8");
+        const parsed = parseYaml(raw);
+        const result = z.array(LedgerEntrySchema).safeParse(parsed);
+        if (result.success) {
+            for (const e of result.data) {
+                const id = e.id;
+                const supBy = e.superseded_by ?? null;
+                if (supBy !== null && supBy.length > 0) {
+                    superseded.set(id, supBy);
+                }
+            }
+        }
     }
     catch {
-        return { active, superseded };
-    }
-    if (!Array.isArray(parsed))
-        return { active, superseded };
-    for (const entry of parsed) {
-        if (typeof entry !== "object" || entry === null)
-            continue;
-        const e = entry;
-        const id = typeof e["id"] === "string" ? e["id"] : null;
-        const supBy = typeof e["superseded_by"] === "string" ? e["superseded_by"] : null;
-        if (id !== null && supBy !== null && supBy.length > 0) {
-            superseded.set(id, supBy);
-        }
+        /* ignore */
     }
     return { active, superseded };
 }
 function fileExt(path) {
     const idx = path.lastIndexOf(".");
-    if (idx === -1)
-        return "";
-    return path.slice(idx).toLowerCase();
+    return idx === -1 ? "" : path.slice(idx).toLowerCase();
 }
-export function runCitationIntegrity(opts) {
-    const findings = [];
-    const maxBytes = opts.maxFileBytes ?? 256 * 1024;
+const SOURCE_EXTENSIONS = new Set([
+    ".ts", ".tsx", ".js", ".jsx", ".mjs", ".cjs",
+    ".py", ".rb", ".go", ".rs", ".java", ".c", ".cc", ".cpp", ".h", ".hpp",
+    ".swift", ".kt", ".sh", ".bash", ".zsh",
+    ".sql", ".html", ".vue", ".svelte", ".css", ".scss",
+]);
+const INV_RE = /§INV-([0-9a-f]{7,})\b/g;
+const DEC_RE = /§DEC-([0-9a-f]{7,})\b/g;
+const TSK_RE = /TODO\((TSK-\d{4}-\d{2}-\d{2}-[\w-]+-\d{5})\)/g;
+/** Run citation-integrity against all source files in repoRoot. */
+export async function runCitationIntegrity(opts) {
+    const files = walkSourceTree(opts.repoRoot);
     const invariants = loadInvariants(opts.repoRoot);
     const decisions = loadDecisions(opts.repoRoot);
-    const files = walkSourceTree(opts.repoRoot);
+    const findings = [];
     for (const rel of files) {
-        if (!TEXT_EXTS.has(fileExt(rel)))
+        if (!SOURCE_EXTENSIONS.has(fileExt(rel)))
             continue;
         const abs = join(opts.repoRoot, rel);
-        let size;
-        try {
-            size = statSync(abs).size;
-        }
-        catch {
-            continue;
-        }
-        if (size > maxBytes)
-            continue;
         let content;
         try {
             content = readFileSync(abs, "utf8");
@@ -118,77 +109,85 @@ export function runCitationIntegrity(opts) {
         catch {
             continue;
         }
-        if (content.length === 0)
-            continue;
-        const matches = scanCitations(content);
-        // §INV invariants
-        for (const m of matches.invariants) {
-            if (invariants.superseded.has(m.id)) {
-                const supBy = invariants.superseded.get(m.id) ?? "(unknown)";
-                findings.push({
-                    pass: PASS_ID,
-                    kind: "superseded_citation",
-                    path: rel,
-                    detail: `${rel}:${m.line} cites §${m.id}, which is superseded by §${supBy}`,
-                    severity: "warn",
-                    line: m.line,
-                });
-                continue;
+        const lines = content.split(/\r?\n/);
+        for (let i = 0; i < lines.length; i++) {
+            const lineText = lines[i] ?? "";
+            const lineNumber = i + 1;
+            // 1. Invariants
+            for (const m of lineText.matchAll(INV_RE)) {
+                const id = `INV-${m[1]}`;
+                if (invariants.active.has(id))
+                    continue;
+                const supBy = invariants.superseded.get(id);
+                if (supBy !== undefined) {
+                    findings.push({
+                        pass: PASS_ID,
+                        kind: "stale_citation",
+                        path: rel,
+                        detail: `${rel}:${lineNumber} references ${id}, which is superseded by ${supBy}`,
+                        severity: "warn",
+                        line: lineNumber,
+                    });
+                }
+                else {
+                    findings.push({
+                        pass: PASS_ID,
+                        kind: "orphaned_citation",
+                        path: rel,
+                        detail: `${rel}:${lineNumber} references ${id}, which is not in the active ledger`,
+                        severity: "warn",
+                        line: lineNumber,
+                    });
+                }
             }
-            if (!invariants.active.has(m.id)) {
-                findings.push({
-                    pass: PASS_ID,
-                    kind: "orphaned_citation",
-                    path: rel,
-                    detail: `${rel}:${m.line} cites §${m.id}, which is not in the invariants ledger`,
-                    severity: "warn",
-                    line: m.line,
-                });
-            }
-        }
-        // §DEC-NNNN bare-symbol citations — resolve against decisions ledger
-        for (const m of matches.decisions) {
-            if (decisions.superseded.has(m.id)) {
-                const supBy = decisions.superseded.get(m.id) ?? "(unknown)";
-                findings.push({
-                    pass: PASS_ID,
-                    kind: "superseded_citation",
-                    path: rel,
-                    detail: `${rel}:${m.line} cites §${m.id}, which is superseded by §${supBy}`,
-                    severity: "warn",
-                    line: m.line,
-                });
-                continue;
+            // 2. Decisions
+            for (const m of lineText.matchAll(DEC_RE)) {
+                const id = `DEC-${m[1]}`;
+                if (decisions.active.has(id))
+                    continue;
+                const supBy = decisions.superseded.get(id);
+                if (supBy !== undefined) {
+                    findings.push({
+                        pass: PASS_ID,
+                        kind: "stale_citation",
+                        path: rel,
+                        detail: `${rel}:${lineNumber} references ${id}, which is superseded by ${supBy}`,
+                        severity: "warn",
+                        line: lineNumber,
+                    });
+                }
+                else {
+                    findings.push({
+                        pass: PASS_ID,
+                        kind: "orphaned_citation",
+                        path: rel,
+                        detail: `${rel}:${lineNumber} references ${id}, which is not in the accepted ledger`,
+                        severity: "warn",
+                        line: lineNumber,
+                    });
+                }
             }
-            if (!decisions.active.has(m.id)) {
+            // 3. Task todos
+            for (const m of lineText.matchAll(TSK_RE)) {
+                const taskId = m[1];
+                if (taskId === undefined)
+                    continue;
+                const activeDir = join(opts.repoRoot, ".cairn", "tasks", "active", taskId);
+                const doneDir = join(opts.repoRoot, ".cairn", "tasks", "done", taskId);
+                if (existsSync(activeDir))
+                    continue;
+                if (existsSync(doneDir))
+                    continue;
                 findings.push({
                     pass: PASS_ID,
                     kind: "orphaned_citation",
                     path: rel,
-                    detail: `${rel}:${m.line} cites §${m.id}, which is not in the decisions ledger`,
+                    detail: `${rel}:${lineNumber} references ${taskId}, which is not in tasks/{active,done}/`,
                     severity: "warn",
-                    line: m.line,
+                    line: lineNumber,
                 });
             }
         }
-        // TODO(TSK-...) — check active/done dirs
-        for (const m of matches.todos) {
-            const taskId = m.id; // already "TSK-..."
-            const activeDir = join(opts.repoRoot, ".cairn", "tasks", "active", taskId);
-            const doneDir = join(opts.repoRoot, ".cairn", "tasks", "done", taskId);
-            if (existsSync(activeDir))
-                continue; // active TODO — fine
-            if (existsSync(doneDir))
-                continue; // done — agent will remove eventually; not a finding
-            findings.push({
-                pass: PASS_ID,
-                kind: "orphaned_citation",
-                path: rel,
-                detail: `${rel}:${m.line} references ${taskId}, which is not in tasks/{active,done}/`,
-                severity: "warn",
-                line: m.line,
-            });
-        }
     }
     return { findings };
 }

package/dist/gc/citation-integrity.js.map

@@ -1 +1 @@
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package/dist/gc/classify.d.ts

@@ -1,5 +1,5 @@
 /**
- * Auto-merge classification per PRIMER §12.2.
+ * Auto-merge classification.
  *
  * Given a set of repo-relative paths a commit will touch, return one of:
  *   safe        — formatting, doc regen, frontmatter refresh, generated content,

package/dist/gc/classify.js

@@ -1,5 +1,5 @@
 /**
- * Auto-merge classification per PRIMER §12.2.
+ * Auto-merge classification.
  *
  * Given a set of repo-relative paths a commit will touch, return one of:
  *   safe        — formatting, doc regen, frontmatter refresh, generated content,
@@ -11,7 +11,7 @@
  * single high-stakes hit dominates the result. A single code hit dominates
  * over safe.
  */
-import { matchAnyGlob } from "../ground/glob.js";
+import { matchAnyGlob } from "@isaacriehm/cairn-state";
 /** Patterns the classifier always treats as safe regardless of file type. */
 const SAFE_PATH_PREFIXES = [
     ".cairn/ground/",

package/dist/gc/classify.js.map

@@ -1 +1 @@
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+{"version":3,"file":"classify.js","sourceRoot":"","sources":["../../src/gc/classify.ts"],"names":[],"mappings":"AAAA;;;;;;;;;;;;GAYG;AAEH,OAAO,EAAE,YAAY,EAAE,MAAM,yBAAyB,CAAC;AAIvD,6EAA6E;AAC7E,MAAM,kBAAkB,GAAG;IACzB,gBAAgB;IAChB,mBAAmB;IACnB,uBAAuB;IACvB,WAAW;CACZ,CAAC;AAEF;yCACyC;AACzC,MAAM,aAAa,GAAG,CAAC,KAAK,EAAE,OAAO,EAAE,MAAM,EAAE,OAAO,EAAE,MAAM,CAAC,CAAC;AAEhE,0DAA0D;AAC1D,MAAM,SAAS,GAAG;IAChB,KAAK;IACL,MAAM;IACN,MAAM;IACN,MAAM;IACN,KAAK;IACL,MAAM;IACN,MAAM;IACN,MAAM;IACN,KAAK;IACL,KAAK;IACL,KAAK;IACL,KAAK;CACN,CAAC;AAYF,MAAM,UAAU,iBAAiB,CAAC,IAAkB;IAClD,MAAM,UAAU,GAAG,IAAI,CAAC,YAAY,EAAE,iBAAiB,IAAI,EAAE,CAAC;IAC9D,MAAM,SAAS,GAAG,IAAI,CAAC,qBAAqB,IAAI,IAAI,CAAC,YAAY,EAAE,sBAAsB,IAAI,EAAE,CAAC;IAEhG,IAAI,GAAG,GAAqB,MAAM,CAAC;IACnC,KAAK,MAAM,IAAI,IAAI,IAAI,CAAC,KAAK,EAAE,CAAC;QAC9B,IAAI,UAAU,CAAC,MAAM,GAAG,CAAC,IAAI,YAAY,CAAC,IAAI,EAAE,UAAU,CAAC,EAAE,CAAC;YAC5D,OAAO,aAAa,CAAC;QACvB,CAAC;QACD,IAAI,GAAG,KAAK,MAAM;YAAE,SAAS,CAAC,sDAAsD;QACpF,IAAI,UAAU,CAAC,IAAI,EAAE,SAAS,CAAC;YAAE,SAAS;QAC1C,IAAI,UAAU,CAAC,IAAI,CAAC,EAAE,CAAC;YACrB,GAAG,GAAG,MAAM,CAAC;YACb,SAAS;QACX,CAAC;QACD,sEAAsE;QACtE,4BAA4B;IAC9B,CAAC;IACD,OAAO,GAAG,CAAC;AACb,CAAC;AAED,SAAS,UAAU,CAAC,IAAY,EAAE,qBAAwC;IACxE,KAAK,MAAM,MAAM,IAAI,kBAAkB,EAAE,CAAC;QACxC,IAAI,IAAI,CAAC,UAAU,CAAC,MAAM,CAAC;YAAE,OAAO,IAAI,CAAC;IAC3C,CAAC;IACD,IAAI,qBAAqB,CAAC,MAAM,GAAG,CAAC,IAAI,YAAY,CAAC,IAAI,EAAE,qBAAqB,CAAC,EAAE,CAAC;QAClF,OAAO,IAAI,CAAC;IACd,CAAC;IACD,gCAAgC;IAChC,IAAI,IAAI,CAAC,UAAU,CAAC,OAAO,CAAC;QAAE,OAAO,IAAI,CAAC;IAC1C,IAAI,IAAI,KAAK,WAAW,IAAI,IAAI,KAAK,WAAW,IAAI,IAAI,KAAK,WAAW;QAAE,OAAO,IAAI,CAAC;IACtF,uEAAuE;IACvE,gEAAgE;IAChE,IAAI,IAAI,CAAC,UAAU,CAAC,gBAAgB,CAAC,IAAI,IAAI,CAAC,UAAU,CAAC,UAAU,CAAC;QAAE,OAAO,IAAI,CAAC;IAClF,iEAAiE;IACjE,KAAK,MAAM,GAAG,IAAI,aAAa,EAAE,CAAC;QAChC,IAAI,IAAI,CAAC,QAAQ,CAAC,GAAG,CAAC;YAAE,OAAO,IAAI,CAAC;IACtC,CAAC;IACD,OAAO,KAAK,CAAC;AACf,CAAC;AAED,SAAS,UAAU,CAAC,IAAY;IAC9B,MAAM,KAAK,GAAG,IAAI,CAAC,WAAW,EAAE,CAAC;IACjC,OAAO,SAAS,CAAC,IAAI,CAAC,CAAC,CAAC,EAAE,EAAE,CAAC,KAAK,CAAC,QAAQ,CAAC,CAAC,CAAC,CAAC,CAAC;AAClD,CAAC"}

package/dist/gc/completion-integrity.d.ts

@@ -4,13 +4,11 @@
  * For every task in `.cairn/tasks/done/`, validate that:
  *   - status.yaml indicates phase: succeeded
  *   - related_run_ids has at least one entry (last entry is "the run")
- *   - the linked run dir exists in either runs/active/ or runs/terminal/
- *   - meta.json is present and parseable, with a sha_pin string
- *   - attestation.yaml is present
- *   - sensor-results.yaml is present and contains no failed entries
- *   - the attested sha_pin is reachable in the current git history
- *
- * All findings are kind: "task_integrity_error" with severity: "warn".
+ *   - the run directory exists in runs/terminal/ (or fallback runs/active/)
+ *   - the run's meta.json contains a sha_pin
+ *   - the sha_pin is reachable in the current git history
+ *   - attestation.yaml is present in the run dir
+ *   - sensor-results.yaml (if present) indicates all sensors passed
  */
 import type { GcFinding } from "./types.js";
 export interface CompletionIntegrityOptions {
@@ -19,4 +17,5 @@ export interface CompletionIntegrityOptions {
 export interface CompletionIntegrityResult {
     findings: GcFinding[];
 }
+/** Run the completion-integrity pass. */
 export declare function runCompletionIntegrity(opts: CompletionIntegrityOptions): Promise<CompletionIntegrityResult>;