@iowarp/clio-coder 0.4.1 → 0.4.3

This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
Files changed (604) hide show
  1. package/CHANGELOG.md +127 -0
  2. package/CONTRIBUTING.md +142 -52
  3. package/README.md +434 -473
  4. package/SECURITY.md +2 -1
  5. package/dist/{acp-ZILU3AUO.js → acp-H2NGRPWO.js} +12 -12
  6. package/dist/{agents-HYWGBGQR.js → agents-TL5LLUQP.js} +56 -55
  7. package/dist/assets/codewiki.json +1 -1
  8. package/dist/{auth-N3QT7CBO.js → auth-E5SW4HMS.js} +23 -21
  9. package/dist/builtins-IA7V7FUC.js +22 -0
  10. package/dist/{chunk-7RY5VZPH.js → chunk-2APPQIER.js} +8 -8
  11. package/dist/{chunk-72GZI5EV.js → chunk-2JH2WHGE.js} +2 -2
  12. package/dist/{chunk-JA5QWE4Z.js → chunk-2UG5F4C5.js} +1973 -1664
  13. package/dist/{chunk-5YHDIDBP.js → chunk-2UH2KFUP.js} +2 -2
  14. package/dist/{chunk-CTJ4RNAA.js → chunk-2VIKGWFZ.js} +2 -2
  15. package/dist/{chunk-I66EAJFY.js → chunk-2WZ546HR.js} +267 -232
  16. package/dist/{chunk-GIZNH63R.js → chunk-35MSIRKH.js} +9 -4
  17. package/dist/chunk-3EBYEESD.js +314 -0
  18. package/dist/{chunk-J5LZHVIT.js → chunk-3M6DQK6S.js} +113 -35
  19. package/dist/{chunk-RKSR6VSF.js → chunk-4IUZQIJ3.js} +29 -1
  20. package/dist/{chunk-6FN3E6KX.js → chunk-4O6MANBS.js} +2 -2
  21. package/dist/chunk-4UVU7BJ5.js +39 -0
  22. package/dist/{chunk-VKRH2TCS.js → chunk-4WR7VSYB.js} +2 -2
  23. package/dist/{chunk-BBTJOK6Y.js → chunk-54CBCGIR.js} +5 -5
  24. package/dist/{chunk-AP73CFDC.js → chunk-5ICU3EUH.js} +2 -2
  25. package/dist/chunk-5MEZN6CB.js +1334 -0
  26. package/dist/{chunk-O42A54GG.js → chunk-5OIVVPHF.js} +2 -2
  27. package/dist/{chunk-ABLSQ6JX.js → chunk-64I3JVYM.js} +8 -2
  28. package/dist/{chunk-AFKWHWXF.js → chunk-6PTFB5VS.js} +39 -22
  29. package/dist/{chunk-VN3SHNBN.js → chunk-7DICMOS6.js} +2 -2
  30. package/dist/chunk-7DRAWPTZ.js +360 -0
  31. package/dist/chunk-7E7I3WLS.js +3762 -0
  32. package/dist/{chunk-BJGUKIG4.js → chunk-7ZYNNDKC.js} +7 -7
  33. package/dist/{chunk-XKA2ICR3.js → chunk-AF4YM7Z4.js} +652 -252
  34. package/dist/{chunk-GVQJ5CCZ.js → chunk-AX2THNSA.js} +12 -12
  35. package/dist/{chunk-IG7BCQBA.js → chunk-B4OAX3SI.js} +65 -3
  36. package/dist/{chunk-TD3PGPQA.js → chunk-B4VEBZKF.js} +3 -3
  37. package/dist/{chunk-74YWRRU5.js → chunk-BEPZRGGU.js} +10 -10
  38. package/dist/{chunk-FEFIFZTL.js → chunk-CE5AX47J.js} +2 -2
  39. package/dist/{chunk-UAPGZHYC.js → chunk-DWUOQKRU.js} +25 -11
  40. package/dist/{chunk-THYWACCR.js → chunk-E3TPLWFX.js} +3 -3
  41. package/dist/{chunk-7EPLI7VL.js → chunk-EKCHAPYA.js} +2 -2
  42. package/dist/{chunk-HLW2MRKE.js → chunk-F4EKGO4N.js} +3 -1
  43. package/dist/{chunk-PJJ6MY27.js → chunk-F5JHEYZM.js} +7 -7
  44. package/dist/{chunk-6CCS4G3W.js → chunk-FTMGRKEF.js} +3 -3
  45. package/dist/{chunk-SINK3QR6.js → chunk-G76U63X4.js} +17 -17
  46. package/dist/{chunk-EIMVLWB3.js → chunk-GHS5EBTQ.js} +64 -9
  47. package/dist/{chunk-QMXC4JB7.js → chunk-GI7YYQ3F.js} +187 -1419
  48. package/dist/{chunk-TZSKNMZG.js → chunk-GTUD2WMY.js} +2 -1
  49. package/dist/{chunk-6HMJX2VU.js → chunk-GWZNEVM2.js} +44 -12
  50. package/dist/chunk-GYV6VZOC.js +26 -0
  51. package/dist/{chunk-MQXIVJ35.js → chunk-HAXOFFRH.js} +5 -5
  52. package/dist/{chunk-UXN6JT4W.js → chunk-HEQY7ZFI.js} +3 -3
  53. package/dist/{chunk-7PWAODYW.js → chunk-I7XBWTYH.js} +2 -2
  54. package/dist/{chunk-GCSMB2KY.js → chunk-I7ZPNEJM.js} +145 -102
  55. package/dist/{chunk-WNP7O5WZ.js → chunk-ID64D7PE.js} +4 -4
  56. package/dist/{chunk-QTFGO774.js → chunk-IGLP3ODT.js} +29 -16
  57. package/dist/chunk-IJNZMHLA.js +101 -0
  58. package/dist/{chunk-BDPT6GTK.js → chunk-INY6HTFL.js} +7 -7
  59. package/dist/{chunk-PBP4B7XR.js → chunk-IUE3Y34X.js} +2 -2
  60. package/dist/{chunk-6NJQITNH.js → chunk-IWT4SF4R.js} +6 -3
  61. package/dist/{chunk-R23Z6K6I.js → chunk-JDAY6FIL.js} +19 -19
  62. package/dist/chunk-JEQ3XTHC.js +42 -0
  63. package/dist/{chunk-FSP7CMNU.js → chunk-JGRC33J2.js} +50 -4
  64. package/dist/{chunk-TVH4ONAM.js → chunk-JKKCYP3C.js} +10 -10
  65. package/dist/{chunk-HJWWJ6IL.js → chunk-JSC3U7TI.js} +16 -4
  66. package/dist/{chunk-C537JADH.js → chunk-KK4JZPBQ.js} +19 -141
  67. package/dist/{chunk-K6BF4U2H.js → chunk-KKOJXO6R.js} +62 -14
  68. package/dist/{chunk-IHXBNWMM.js → chunk-KXDSS5WJ.js} +7 -3
  69. package/dist/{chunk-6DWBAZ5U.js → chunk-L47TF46W.js} +5 -7
  70. package/dist/{chunk-HUAS7ITX.js → chunk-LDJG7DW3.js} +91 -42
  71. package/dist/{chunk-CDNVLKUX.js → chunk-LLDJM5XK.js} +13 -7
  72. package/dist/{chunk-YPI3QQCF.js → chunk-MCEPRMZW.js} +2 -4
  73. package/dist/{chunk-Y4CAGMM6.js → chunk-MNJGS2IN.js} +5 -6
  74. package/dist/{chunk-VKFQTNDV.js → chunk-MUW2BDDH.js} +4 -4
  75. package/dist/{chunk-E67WX76H.js → chunk-MWUZBSAQ.js} +104 -152
  76. package/dist/{chunk-OJTRZGR3.js → chunk-N2Z7HLVY.js} +21 -21
  77. package/dist/{chunk-TVHHYFHE.js → chunk-NEDJ26B5.js} +2 -2
  78. package/dist/{chunk-FYUN5KZ3.js → chunk-NIQJ66N4.js} +21 -21
  79. package/dist/{chunk-U2WB7TZS.js → chunk-NMJXSHBJ.js} +97 -85
  80. package/dist/{chunk-CWVRRIEI.js → chunk-NZMNUPZZ.js} +2 -2
  81. package/dist/{chunk-VEGN6WIQ.js → chunk-O5CVSAG5.js} +3 -3
  82. package/dist/{chunk-MOPSG2X7.js → chunk-OML5D5V5.js} +8 -8
  83. package/dist/{chunk-2VG7KLYV.js → chunk-PAJQJ7BS.js} +5816 -3255
  84. package/dist/{chunk-ZW55JB7N.js → chunk-PUVDKJ2Y.js} +2 -2
  85. package/dist/{chunk-BTGG6BG2.js → chunk-QWGDJJYJ.js} +158 -19
  86. package/dist/chunk-R6Q67RJH.js +134 -0
  87. package/dist/{chunk-ZJLUDYFY.js → chunk-RRNP2ANY.js} +6 -6
  88. package/dist/{chunk-PVAMAVBB.js → chunk-RSJ25QSL.js} +102 -2
  89. package/dist/{chunk-NLFAQR7Z.js → chunk-S66XZJOF.js} +3 -23
  90. package/dist/chunk-SKHCAU7K.js +385 -0
  91. package/dist/chunk-SZAA6XDG.js +30 -0
  92. package/dist/{chunk-J4HBWF6Y.js → chunk-TM6LQDI3.js} +131 -28
  93. package/dist/chunk-UOIZ7DA4.js +41 -0
  94. package/dist/{chunk-MA3H6DM5.js → chunk-UPZU6GE4.js} +25 -3
  95. package/dist/{chunk-BWW4HLO4.js → chunk-UXCU4E3T.js} +8 -6
  96. package/dist/{chunk-N5UK64DP.js → chunk-V2ANDPVT.js} +4 -4
  97. package/dist/{chunk-AK5XEFVZ.js → chunk-VA5FNYMT.js} +26 -13
  98. package/dist/{chunk-6VC4OV3Z.js → chunk-VIA6RFQZ.js} +3 -11
  99. package/dist/{chunk-ZAZB4JMW.js → chunk-VKPAQYEB.js} +27 -8
  100. package/dist/{chunk-QKIFBZKT.js → chunk-VW6DOEDG.js} +497 -81
  101. package/dist/{chunk-SCYB3HA4.js → chunk-W6RRQCPQ.js} +63 -19
  102. package/dist/{chunk-2NM363SV.js → chunk-WBKFA554.js} +10 -10
  103. package/dist/{chunk-R32CLGZ6.js → chunk-WCXUNS7U.js} +82 -21
  104. package/dist/{chunk-GPPB3JBE.js → chunk-WRBAGUNF.js} +3 -3
  105. package/dist/{chunk-IXJT6DCX.js → chunk-XIVNBFZS.js} +85 -30
  106. package/dist/{chunk-UEDMSP56.js → chunk-XPWWI35G.js} +417 -201
  107. package/dist/chunk-XRZT5WY5.js +47 -0
  108. package/dist/{chunk-3QSOM6PA.js → chunk-Y3CBHOR6.js} +2 -2
  109. package/dist/{chunk-VXMFAE2W.js → chunk-YPC6ZR5L.js} +19 -6
  110. package/dist/{chunk-AKB4GYDL.js → chunk-YQWYVTMC.js} +5 -5
  111. package/dist/{chunk-6I5ILFOF.js → chunk-ZA4VCIGV.js} +3 -3
  112. package/dist/{chunk-7OBGU7UB.js → chunk-ZDN3Y73Y.js} +12 -18
  113. package/dist/{chunk-3I5NY75V.js → chunk-ZWPRK62N.js} +8 -5
  114. package/dist/cli/index.js +41 -39
  115. package/dist/{clio-IT3G3VQH.js → clio-CMMK4KRR.js} +9 -9
  116. package/dist/{code-nav-RK6S7F6E.js → code-nav-MDZNQS33.js} +89 -21
  117. package/dist/{components-UBWCQSRW.js → components-UCUQ4QXW.js} +4 -4
  118. package/dist/{config-3QZRWZJF.js → config-SVM5P5YI.js} +131 -84
  119. package/dist/{configure-FL7Y3KJF.js → configure-LE3IK2TJ.js} +28 -26
  120. package/dist/{context-5HE7ODYK.js → context-2OHRKS42.js} +69 -64
  121. package/dist/{context-KYQFRVDC.js → context-E3VC7RX5.js} +15 -11
  122. package/dist/{context-XNHL75JV.js → context-VNCR7KAG.js} +93 -65
  123. package/dist/{context-clear-N545L53A.js → context-clear-BW4O37TG.js} +64 -60
  124. package/dist/context-map-COB37XXN.js +505 -0
  125. package/dist/{context-working-set-QHKXSV2F.js → context-working-set-VDS25HXZ.js} +19 -18
  126. package/dist/{dispatch-runner-RGIE5PCT.js → dispatch-runner-5AHT53RF.js} +93 -82
  127. package/dist/{docs-5NAF6AU7.js → docs-PD3EXDKU.js} +21 -20
  128. package/dist/{doctor-ZGPEGHIP.js → doctor-WNNVO6FY.js} +48 -47
  129. package/dist/{eval-GXLL44RD.js → eval-7G7SGAYO.js} +287 -115
  130. package/dist/{eval-inventory-HBWSWQOK.js → eval-inventory-Y6QRFOH5.js} +4 -4
  131. package/dist/{evidence-HWLBRH3Q.js → evidence-VD6736FQ.js} +67 -64
  132. package/dist/{evolve-FTZBMNVW.js → evolve-AL3NGVRL.js} +65 -62
  133. package/dist/{extensions-VHRBEID7.js → extensions-MOVJ32NM.js} +9 -7
  134. package/dist/{fleet-CKZHJWZJ.js → fleet-QZHUMAGI.js} +114 -111
  135. package/dist/{fleet-commands-EXDXBMV6.js → fleet-commands-BAYT5FJZ.js} +10 -10
  136. package/dist/{fleet-decisions-OTHB6KRL.js → fleet-decisions-IREVMRU4.js} +7 -6
  137. package/dist/{fleet-graph-YTEZUCUT.js → fleet-graph-YCTT3HTI.js} +22 -19
  138. package/dist/{fleet-inspect-SS6YMDCK.js → fleet-inspect-QVJTDAVB.js} +58 -55
  139. package/dist/{fleet-preflight-PBY4VYOM.js → fleet-preflight-25QAFPK4.js} +4 -4
  140. package/dist/{fleet-validate-KMEM5L3S.js → fleet-validate-5O57AAJ7.js} +26 -23
  141. package/dist/{fleet-verify-QD5M7E7Q.js → fleet-verify-CPH2W2T6.js} +59 -56
  142. package/dist/{fleet-view-WAMJYNDT.js → fleet-view-SWBR3VGQ.js} +58 -55
  143. package/dist/{init-5XQRBOFV.js → init-J477LKZH.js} +82 -79
  144. package/dist/{interop-34TVO25M.js → interop-3FCM6XLG.js} +11 -11
  145. package/dist/{library-3QY6KF57.js → library-QUQEIUG6.js} +30 -27
  146. package/dist/{memory-L4UTIIIW.js → memory-SGGSEP65.js} +67 -64
  147. package/dist/{models-ZVX3QOWE.js → models-HEKUAXXK.js} +53 -46
  148. package/dist/{monitor-CEKVSYTS.js → monitor-HKU57TYQ.js} +63 -60
  149. package/dist/{orchestrator-77BAP6BC.js → orchestrator-VDFAEFAI.js} +1831 -1057
  150. package/dist/{panes-7STHOAUJ.js → panes-DN2SSFOH.js} +5 -5
  151. package/dist/{panes-SHAUIRXY.js → panes-TALGNPZT.js} +29 -14
  152. package/dist/{paths-L7LGY6RN.js → paths-NBMFAIEZ.js} +5 -5
  153. package/dist/reset-EAJFFJVB.js +344 -0
  154. package/dist/{resources-74GKTLSF.js → resources-OVKSEFVE.js} +29 -20
  155. package/dist/{run-HBAUJNNZ.js → run-7DP7ZF2J.js} +120 -115
  156. package/dist/{share-G3APVLVP.js → share-WML67FT3.js} +32 -27
  157. package/dist/{skills-35HHUKCR.js → skills-SG662R2K.js} +41 -31
  158. package/dist/{skills-eval-QN4HSHDC.js → skills-eval-VVZEUU46.js} +78 -77
  159. package/dist/{skills-inventory-J357J34F.js → skills-inventory-I2E23GET.js} +23 -20
  160. package/dist/{slash-commands-JZZCQA32.js → slash-commands-S7MBJDQK.js} +40 -36
  161. package/dist/{steer-XAVHJM22.js → steer-2LQOMCPB.js} +3 -3
  162. package/dist/{support-U7QOWY26.js → support-CC2UJBJ6.js} +6 -6
  163. package/dist/{targets-DSM6CY3M.js → targets-4QC3HIEW.js} +54 -54
  164. package/dist/{terminal-lease-JOPFUVEM.js → terminal-lease-TUHIJ6Y2.js} +5 -5
  165. package/dist/{tools-MKNWVPBH.js → tools-TFGJICCU.js} +10 -10
  166. package/dist/{trace-ECQ7TIYZ.js → trace-FXMXUZUF.js} +55 -7
  167. package/dist/uninstall-5PEVOE5B.js +408 -0
  168. package/dist/upgrade-M4WXY6KN.js +303 -0
  169. package/dist/{usage-X52N3IDJ.js → usage-N7ZNVLEM.js} +151 -104
  170. package/dist/{verifiers-EJTVVSMA.js → verifiers-DJTP4XX6.js} +15 -15
  171. package/dist/{verify-YJL6XET2.js → verify-RWE4PPEK.js} +9 -9
  172. package/dist/{web-fetch-MPIFL3LL.js → web-fetch-MPARV2K7.js} +2 -2
  173. package/dist/{wiki-generate-4NDZTQ4B.js → wiki-generate-C7IQOXSP.js} +89 -86
  174. package/dist/{with-panes-OBOBFIIR.js → with-panes-4GCGSL7J.js} +53 -257
  175. package/dist/worker/entry.js +90 -74
  176. package/docs/README.md +176 -81
  177. package/docs/{acp.md → architecture/acp.md} +36 -20
  178. package/docs/{alcf-provider.md → architecture/alcf-provider.md} +8 -5
  179. package/docs/{architecture.md → architecture/architecture.md} +43 -22
  180. package/docs/{artifact-placement.md → architecture/artifact-placement.md} +27 -23
  181. package/docs/architecture/artifact-versions.md +90 -0
  182. package/docs/{capacity-and-scheduling.md → architecture/capacity-and-scheduling.md} +26 -13
  183. package/docs/{context-engine.md → architecture/context-engine.md} +29 -25
  184. package/docs/{context-working-set.md → architecture/context-working-set.md} +13 -10
  185. package/docs/{dispatch-architecture-rationale.md → architecture/dispatch-architecture-rationale.md} +12 -9
  186. package/docs/{dispatch-typed-intent.md → architecture/dispatch-typed-intent.md} +68 -46
  187. package/docs/{evidence-and-memory.md → architecture/evidence-and-memory.md} +23 -16
  188. package/docs/{middleware-and-components.md → architecture/middleware-and-components.md} +11 -5
  189. package/docs/{model-catalog.md → architecture/model-catalog.md} +61 -27
  190. package/docs/{observability.md → architecture/observability.md} +38 -14
  191. package/docs/{pi-boundary.md → architecture/pi-boundary.md} +24 -11
  192. package/docs/{prompt-envelope-and-tools.md → architecture/prompt-envelope-and-tools.md} +57 -20
  193. package/docs/{provider-adapter-cookbook.md → architecture/provider-adapter-cookbook.md} +99 -25
  194. package/docs/{safety-model.md → architecture/safety-model.md} +35 -20
  195. package/docs/{session-lifecycle.md → architecture/session-lifecycle.md} +8 -5
  196. package/docs/architecture/time-conventions.md +125 -0
  197. package/docs/{trace-store.md → architecture/trace-store.md} +13 -5
  198. package/docs/{tui-design.md → architecture/tui-design.md} +13 -13
  199. package/docs/{worker-dispatch-mechanics.md → architecture/worker-dispatch-mechanics.md} +27 -30
  200. package/docs/{built-in-agents.md → guide/built-in-agents.md} +65 -35
  201. package/docs/{commands-and-modes.md → guide/commands-and-modes.md} +66 -61
  202. package/docs/{configuration-and-targets.md → guide/configuration-and-targets.md} +323 -297
  203. package/docs/guide/configuration-reference.md +1163 -0
  204. package/docs/{environment-variables.md → guide/environment-variables.md} +33 -28
  205. package/docs/{exit-codes-and-output.md → guide/exit-codes-and-output.md} +6 -3
  206. package/docs/{extensions-and-sharing.md → guide/extensions-and-sharing.md} +41 -14
  207. package/docs/{fleet-dispatch.md → guide/fleet-dispatch.md} +39 -43
  208. package/docs/{glossary.md → guide/glossary.md} +14 -11
  209. package/docs/{installation-and-lifecycle.md → guide/installation-and-lifecycle.md} +81 -17
  210. package/docs/guide/panes-and-files.md +290 -0
  211. package/docs/{proactive-memory.md → guide/proactive-memory.md} +131 -107
  212. package/docs/{resource-library.md → guide/resource-library.md} +13 -4
  213. package/docs/{skills-marketplace.md → guide/skills-marketplace.md} +25 -3
  214. package/docs/{tool-usage.md → guide/tool-usage.md} +87 -23
  215. package/docs/{troubleshooting.md → guide/troubleshooting.md} +9 -4
  216. package/docs/{config-knobs-audit.md → history/config-knobs-audit.md} +11 -11
  217. package/docs/{release-cut-checklist.md → history/release-cut-checklist.md} +29 -2
  218. package/docs/process/development-pipeline.md +152 -0
  219. package/docs/process/documentation-coverage.md +100 -0
  220. package/docs/process/documentation-guide.md +187 -0
  221. package/docs/{eval-runner.md → process/eval-runner.md} +108 -53
  222. package/docs/{evals-internal.md → process/evals-internal.md} +10 -10
  223. package/docs/{evolution.md → process/evolution.md} +2 -2
  224. package/docs/{fleet-demo-runbook.md → process/fleet-demo-runbook.md} +11 -7
  225. package/docs/{git-commit-provenance.md → process/git-commit-provenance.md} +11 -4
  226. package/docs/{performance-methodology.md → process/performance-methodology.md} +87 -69
  227. package/docs/{scientific-validation.md → process/scientific-validation.md} +4 -4
  228. package/evals/README.md +2 -2
  229. package/evals/behavioral-model.yaml +3 -2
  230. package/package.json +10 -8
  231. package/skills/README.md +52 -41
  232. package/skills/coding/ast-grep/SKILL.md +102 -31
  233. package/skills/coding/ast-grep/evals.md +26 -0
  234. package/skills/coding/coding-standards/SKILL.md +41 -6
  235. package/skills/coding/coding-standards/evals.md +23 -0
  236. package/skills/coding/prototype/SKILL.md +88 -29
  237. package/skills/coding/prototype/evals.md +19 -0
  238. package/skills/coding/tdd/SKILL.md +81 -54
  239. package/skills/coding/tdd/evals.md +20 -0
  240. package/skills/context/context-handoff/SKILL.md +44 -3
  241. package/skills/context/context-handoff/evals.md +44 -0
  242. package/skills/context/context-prime/SKILL.md +46 -16
  243. package/skills/context/context-prime/evals.md +45 -0
  244. package/skills/git/branch-closeout/SKILL.md +132 -0
  245. package/skills/git/branch-closeout/evals.md +133 -0
  246. package/skills/git/branch-closeout/references/closeout-checklist.md +81 -0
  247. package/skills/git/file-ticket/SKILL.md +78 -64
  248. package/skills/git/file-ticket/assets/issue-template.md +22 -0
  249. package/skills/git/file-ticket/evals.md +31 -26
  250. package/skills/git/file-ticket/references/issue-discovery.md +49 -0
  251. package/skills/git/fix-issue/SKILL.md +88 -65
  252. package/skills/git/fix-issue/evals.md +35 -31
  253. package/skills/git/fix-issue/references/diagnosis-and-rca.md +46 -0
  254. package/skills/git/resolve-merge-conflicts/SKILL.md +101 -52
  255. package/skills/git/resolve-merge-conflicts/evals.md +52 -25
  256. package/skills/git/resolve-merge-conflicts/references/conflict-matrix.md +126 -0
  257. package/skills/git/ship/SKILL.md +103 -67
  258. package/skills/git/ship/assets/pr-template.md +21 -0
  259. package/skills/git/ship/evals.md +44 -28
  260. package/skills/git/ship/references/remote-and-branch-policy.md +62 -0
  261. package/skills/git/worktree-create/SKILL.md +80 -50
  262. package/skills/git/worktree-create/evals.md +40 -33
  263. package/skills/git/worktree-create/references/worktree-setup.md +62 -66
  264. package/skills/git/worktree-merge/SKILL.md +112 -65
  265. package/skills/git/worktree-merge/evals.md +42 -34
  266. package/skills/git/worktree-merge/references/merge-strategies.md +52 -0
  267. package/skills/meta/clio-coder-dev/SKILL.md +9 -5
  268. package/skills/meta/clio-coder-dev/evals.md +3 -2
  269. package/skills/meta/clio-coder-test/SKILL.md +102 -95
  270. package/skills/meta/clio-coder-test/evals.md +9 -4
  271. package/skills/meta/clio-coder-test/references/harness.md +100 -124
  272. package/skills/meta/clio-coder-test/references/test-map.md +77 -50
  273. package/skills/meta/credentials/SKILL.md +2 -2
  274. package/skills/meta/find-skills/SKILL.md +2 -2
  275. package/skills/meta/herdr/SKILL.md +2 -2
  276. package/skills/meta/skill-craft/SKILL.md +22 -16
  277. package/skills/planning/archify/SKILL.md +196 -0
  278. package/skills/planning/archify/evals.md +65 -0
  279. package/skills/planning/architecture/SKILL.md +62 -13
  280. package/skills/planning/architecture/evals.md +65 -0
  281. package/skills/planning/backlog/SKILL.md +131 -15
  282. package/skills/planning/backlog/evals.md +142 -0
  283. package/skills/planning/prd/SKILL.md +47 -7
  284. package/skills/planning/prd/evals.md +54 -0
  285. package/skills/planning/product-intent/SKILL.md +58 -3
  286. package/skills/planning/product-intent/evals.md +70 -0
  287. package/skills/planning/tech-spec/SKILL.md +54 -3
  288. package/skills/planning/tech-spec/evals.md +73 -0
  289. package/skills/registry.yaml +70 -62
  290. package/skills/remote.yaml +13 -0
  291. package/skills/research/arxiv-literature/SKILL.md +77 -19
  292. package/skills/research/arxiv-literature/evals.md +50 -0
  293. package/skills/research/experiment-protocol/SKILL.md +21 -2
  294. package/skills/research/experiment-protocol/evals.md +23 -0
  295. package/skills/research/scientific-debugging/SKILL.md +24 -2
  296. package/skills/research/scientific-debugging/evals.md +18 -0
  297. package/skills/research/scientific-modernization/SKILL.md +27 -2
  298. package/skills/research/scientific-modernization/evals.md +27 -0
  299. package/skills/skill-marketplace.json +97 -62
  300. package/skills/workflow/cut-it/SKILL.md +66 -6
  301. package/skills/workflow/cut-it/evals.md +101 -0
  302. package/skills/workflow/design-council/SKILL.md +118 -28
  303. package/skills/workflow/design-council/evals.md +161 -0
  304. package/skills/workflow/grill-me/SKILL.md +87 -11
  305. package/skills/workflow/grill-me/evals.md +153 -0
  306. package/skills/workflow/workflow-distiller/SKILL.md +77 -18
  307. package/skills/workflow/workflow-distiller/evals.md +118 -0
  308. package/src/cli/args.ts +2 -2
  309. package/src/cli/bootstrap-generate.ts +1 -1
  310. package/src/cli/config-inspect.ts +65 -12
  311. package/src/cli/configure-interop.ts +105 -13
  312. package/src/cli/configure-oauth.ts +57 -0
  313. package/src/cli/configure-onboarding.ts +980 -0
  314. package/src/cli/configure-target.ts +594 -0
  315. package/src/cli/configure.ts +1082 -532
  316. package/src/cli/context-map.ts +114 -0
  317. package/src/cli/context.ts +4 -0
  318. package/src/cli/docs.ts +22 -14
  319. package/src/cli/doctor-naming.ts +5 -5
  320. package/src/cli/doctor-toolchain.ts +3 -3
  321. package/src/cli/eval.ts +1 -2
  322. package/src/cli/extensions.ts +2 -1
  323. package/src/cli/fleet.ts +1 -1
  324. package/src/cli/index.ts +3 -1
  325. package/src/cli/internal-dispatch.ts +3 -4
  326. package/src/cli/lifecycle-presenter.ts +436 -0
  327. package/src/cli/models.ts +10 -2
  328. package/src/cli/modes/print.ts +5 -1
  329. package/src/cli/panes.ts +19 -5
  330. package/src/cli/reset.ts +228 -106
  331. package/src/cli/run.ts +9 -4
  332. package/src/cli/select.ts +664 -0
  333. package/src/cli/share.ts +5 -1
  334. package/src/cli/skills-eval.ts +3 -3
  335. package/src/cli/skills.ts +9 -2
  336. package/src/cli/targets.ts +5 -6
  337. package/src/cli/trace.ts +55 -4
  338. package/src/cli/uninstall.ts +233 -165
  339. package/src/cli/upgrade.ts +204 -149
  340. package/src/cli/usage.ts +86 -27
  341. package/src/cli/validate-model.ts +3 -3
  342. package/src/cli/wiki-generate.ts +1 -1
  343. package/src/core/artifact-paths.ts +1 -1
  344. package/src/core/bash-exec.ts +131 -86
  345. package/src/core/bus-events.ts +51 -6
  346. package/src/core/config.ts +61 -1
  347. package/src/core/defaults.ts +7 -4
  348. package/src/core/dispatch-outcome.ts +16 -0
  349. package/src/core/external-diagnostic.ts +44 -0
  350. package/src/core/gateway-routing.ts +157 -0
  351. package/src/core/guardrails.ts +10 -49
  352. package/src/core/prompt-hint.ts +9 -0
  353. package/src/core/safe-exec.ts +17 -2
  354. package/src/core/skill-activation.ts +89 -2
  355. package/src/domains/agents/builtins/architect.md +2 -3
  356. package/src/domains/agents/builtins/coder.md +3 -2
  357. package/src/domains/agents/builtins/debugger.md +2 -2
  358. package/src/domains/agents/builtins/documenter.md +2 -2
  359. package/src/domains/agents/builtins/git-master.md +1 -1
  360. package/src/domains/agents/builtins/oracle.md +1 -1
  361. package/src/domains/agents/builtins/provenance.md +1 -1
  362. package/src/domains/agents/builtins/researcher.md +1 -1
  363. package/src/domains/agents/builtins/scout.md +1 -1
  364. package/src/domains/agents/builtins/tester.md +2 -2
  365. package/src/domains/agents/builtins/verifier.md +2 -2
  366. package/src/domains/agents/builtins/wiki-writer.md +1 -1
  367. package/src/domains/agents/builtins/world-knowledge.md +31 -0
  368. package/src/domains/agents/catalog.ts +13 -15
  369. package/src/domains/agents/contract.ts +2 -0
  370. package/src/domains/agents/extension.ts +23 -1
  371. package/src/domains/agents/result-contract.ts +70 -0
  372. package/src/domains/config/keybindings.ts +8 -0
  373. package/src/domains/context/extension.ts +0 -3
  374. package/src/domains/context/wiki/map-seed.ts +589 -0
  375. package/src/domains/context/wiki/plan.ts +2 -2
  376. package/src/domains/context/working-set/path-index.ts +1 -0
  377. package/src/domains/dispatch/admission.ts +29 -0
  378. package/src/domains/dispatch/agent-candidates.ts +10 -0
  379. package/src/domains/dispatch/budget-envelope.ts +86 -1
  380. package/src/domains/dispatch/capability-match.ts +11 -0
  381. package/src/domains/dispatch/capacity-lease.ts +17 -0
  382. package/src/domains/dispatch/contract.ts +11 -1
  383. package/src/domains/dispatch/extension.ts +237 -49
  384. package/src/domains/dispatch/host-verification.ts +435 -39
  385. package/src/domains/dispatch/intent-requirements.ts +10 -0
  386. package/src/domains/dispatch/intent.ts +18 -1
  387. package/src/domains/dispatch/path-scope.ts +235 -24
  388. package/src/domains/dispatch/run-event-journal.ts +4 -15
  389. package/src/domains/dispatch/state.ts +2 -3
  390. package/src/domains/dispatch/transport.ts +45 -21
  391. package/src/domains/dispatch/types.ts +58 -3
  392. package/src/domains/dispatch/worker-model-metadata.ts +38 -0
  393. package/src/domains/eval/artifacts/store.ts +5 -0
  394. package/src/domains/eval/metrics/call-ledger-stream.ts +34 -11
  395. package/src/domains/eval/metrics/token-stream.ts +201 -31
  396. package/src/domains/eval/metrics/tracked.ts +40 -4
  397. package/src/domains/eval/runners/clio-run.ts +5 -2
  398. package/src/domains/eval/schema/suite.ts +28 -0
  399. package/src/domains/eval/schema/verdict.ts +2 -2
  400. package/src/domains/eval/store.ts +8 -1
  401. package/src/domains/eval/suites/resolve.ts +13 -1
  402. package/src/domains/eval/suites/run.ts +24 -3
  403. package/src/domains/evidence/trust-status.ts +10 -1
  404. package/src/domains/extensions/contract.ts +15 -1
  405. package/src/domains/extensions/discovery.ts +238 -41
  406. package/src/domains/extensions/extension.ts +105 -6
  407. package/src/domains/extensions/index.ts +24 -0
  408. package/src/domains/extensions/integrity.ts +189 -0
  409. package/src/domains/extensions/manager.ts +17 -1
  410. package/src/domains/extensions/resource-path.ts +27 -0
  411. package/src/domains/extensions/resources.ts +18 -38
  412. package/src/domains/extensions/snapshot-store.ts +39 -0
  413. package/src/domains/extensions/snapshot.ts +180 -0
  414. package/src/domains/extensions/state.ts +385 -57
  415. package/src/domains/extensions/types.ts +118 -1
  416. package/src/domains/interop/registry.ts +6 -2
  417. package/src/domains/interop/types.ts +4 -0
  418. package/src/domains/lifecycle/migrations/2026-09-01-extension-install-digests.ts +27 -0
  419. package/src/domains/lifecycle/migrations/index.ts +6 -0
  420. package/src/domains/lifecycle/naming-resources.ts +19 -4
  421. package/src/domains/lifecycle/naming-yazi.ts +10 -5
  422. package/src/domains/memory/task-memory-policy.ts +70 -26
  423. package/src/domains/memory/task-memory-telemetry.ts +1 -0
  424. package/src/domains/middleware/contract.ts +26 -0
  425. package/src/domains/middleware/extension.ts +24 -24
  426. package/src/domains/middleware/hook-receipts.ts +27 -4
  427. package/src/domains/middleware/hooks-io.ts +65 -32
  428. package/src/domains/middleware/hooks.ts +64 -0
  429. package/src/domains/middleware/index.ts +28 -5
  430. package/src/domains/middleware/marketplace-offer.ts +3 -35
  431. package/src/domains/middleware/memory-intervention.ts +127 -32
  432. package/src/domains/middleware/memory-step-endpoint.ts +3 -2
  433. package/src/domains/middleware/registrations.ts +326 -0
  434. package/src/domains/middleware/runtime.ts +28 -0
  435. package/src/domains/middleware/skills-reminder.ts +31 -2
  436. package/src/domains/middleware/snapshot.ts +20 -7
  437. package/src/domains/mux/contract.ts +38 -0
  438. package/src/domains/mux/detect.ts +6 -13
  439. package/src/domains/mux/index.ts +1 -1
  440. package/src/domains/mux/operations.ts +44 -5
  441. package/src/domains/mux/yazi/assets/yazi.toml +2 -2
  442. package/src/domains/mux/yazi/session.ts +53 -4
  443. package/src/domains/mux/yazi/theme.ts +117 -17
  444. package/src/domains/observability/compaction-usage.ts +118 -0
  445. package/src/domains/observability/contract.ts +10 -11
  446. package/src/domains/observability/cost.ts +1 -1
  447. package/src/domains/observability/extension.ts +17 -4
  448. package/src/domains/observability/out-of-turn-usage.ts +52 -21
  449. package/src/domains/observability/projection.ts +14 -90
  450. package/src/domains/observability/trace-store.ts +43 -7
  451. package/src/domains/prompts/compiler.ts +73 -53
  452. package/src/domains/prompts/contract.ts +15 -3
  453. package/src/domains/prompts/extension.ts +97 -9
  454. package/src/domains/prompts/fragments/identity/clio-worker.md +1 -3
  455. package/src/domains/prompts/fragments/identity/clio.md +6 -12
  456. package/src/domains/prompts/fragments/identity/docs-routing.md +1 -2
  457. package/src/domains/prompts/fragments/identity/self-awareness.md +3 -11
  458. package/src/domains/prompts/fragments/operating/contract.md +7 -15
  459. package/src/domains/prompts/fragments/operating/delegation.md +32 -34
  460. package/src/domains/prompts/fragments/operating/skills.md +10 -24
  461. package/src/domains/prompts/fragments/operating/worker.md +1 -8
  462. package/src/domains/providers/contract.ts +4 -1
  463. package/src/domains/providers/extension.ts +40 -9
  464. package/src/domains/providers/index.ts +1 -1
  465. package/src/domains/providers/model-capabilities.ts +9 -0
  466. package/src/domains/providers/model-discovery.ts +2 -0
  467. package/src/domains/providers/model-runtime-capabilities.ts +99 -25
  468. package/src/domains/providers/models/local-models/clio-coder-local-coding-targets.yaml +699 -114
  469. package/src/domains/providers/runtime-resolution.ts +31 -0
  470. package/src/domains/providers/runtimes/antigravity/antigravity-code.ts +225 -45
  471. package/src/domains/providers/runtimes/common/lmstudio-http.ts +6 -2
  472. package/src/domains/providers/runtimes/common/local-synth.ts +2 -0
  473. package/src/domains/providers/runtimes/common/probe-helpers.ts +7 -2
  474. package/src/domains/providers/runtimes/local-native/llamacpp.ts +9 -1
  475. package/src/domains/providers/runtimes/protocol/litellm.ts +119 -29
  476. package/src/domains/providers/support.ts +11 -5
  477. package/src/domains/providers/target-model-cache.ts +25 -2
  478. package/src/domains/providers/types/capability-flags.ts +2 -0
  479. package/src/domains/providers/types/cost-provenance.ts +19 -0
  480. package/src/domains/providers/types/local-model-quirks.ts +85 -37
  481. package/src/domains/providers/types/runtime-descriptor.ts +20 -1
  482. package/src/domains/providers/types/target-descriptor.ts +19 -0
  483. package/src/domains/resources/index.ts +3 -0
  484. package/src/domains/resources/skills/install.ts +72 -7
  485. package/src/domains/resources/skills/loader.ts +23 -19
  486. package/src/domains/resources/skills/marketplace.ts +63 -11
  487. package/src/domains/safety/autonomy.ts +15 -0
  488. package/src/domains/safety/call-target.ts +1 -1
  489. package/src/domains/safety/index.ts +1 -0
  490. package/src/domains/safety/loop-detector.ts +7 -4
  491. package/src/domains/safety/path-policy.ts +1 -1
  492. package/src/domains/safety/policy-engine.ts +34 -11
  493. package/src/domains/safety/protected-artifacts.ts +191 -88
  494. package/src/domains/safety/run-effects.ts +2 -22
  495. package/src/domains/safety/skill-authority.ts +55 -0
  496. package/src/domains/session/compaction/compact.ts +72 -22
  497. package/src/domains/session/entries.ts +6 -0
  498. package/src/domains/session/task-board.ts +10 -9
  499. package/src/domains/session/usage.ts +3 -3
  500. package/src/domains/share/archive.ts +164 -7
  501. package/src/engine/acp/server.ts +62 -9
  502. package/src/engine/agent.ts +13 -3
  503. package/src/engine/ai.ts +26 -8
  504. package/src/engine/antigravity/subprocess-runtime.ts +386 -120
  505. package/src/engine/api-registry.ts +3 -0
  506. package/src/engine/apis/llamacpp-residency.ts +3 -4
  507. package/src/engine/apis/lmstudio.ts +3 -3
  508. package/src/engine/apis/ollama-native.ts +6 -6
  509. package/src/engine/apis/openai-completions.ts +145 -39
  510. package/src/engine/apis/output-budget.ts +8 -18
  511. package/src/engine/apis/residency.ts +8 -27
  512. package/src/engine/external-subprocess.ts +114 -6
  513. package/src/engine/gemma-channel-filter.ts +19 -0
  514. package/src/engine/loop-guard.ts +92 -12
  515. package/src/engine/worker-runtime.ts +40 -11
  516. package/src/engine/worker-tools.ts +3 -1
  517. package/src/entry/background-model-metadata.ts +18 -0
  518. package/src/entry/compaction-prompt.ts +57 -0
  519. package/src/entry/extension-hook-sources.ts +28 -0
  520. package/src/entry/extension-reload.ts +309 -0
  521. package/src/entry/orchestrator.ts +464 -251
  522. package/src/entry/task-memory-lifecycle.ts +35 -0
  523. package/src/interactive/application-controller.ts +2 -1
  524. package/src/interactive/bus-notices.ts +8 -1
  525. package/src/interactive/chat-loop-messages.ts +16 -17
  526. package/src/interactive/chat-loop.ts +75 -3
  527. package/src/interactive/chat-panel.ts +36 -13
  528. package/src/interactive/chat-renderer.ts +72 -7
  529. package/src/interactive/cost-overlay.ts +26 -2
  530. package/src/interactive/dispatch-board.ts +6 -11
  531. package/src/interactive/footer/widgets.ts +13 -0
  532. package/src/interactive/interactive-application.ts +39 -4
  533. package/src/interactive/interactive-input-runtime.ts +4 -0
  534. package/src/interactive/interactive-presentation.ts +2 -2
  535. package/src/interactive/interactive-slash-runtime.ts +4 -1
  536. package/src/interactive/overlays/extensions.ts +9 -1
  537. package/src/interactive/overlays/help-reference.ts +13 -0
  538. package/src/interactive/overlays/settings.ts +27 -16
  539. package/src/interactive/panes-runtime.ts +111 -35
  540. package/src/interactive/prompt-cache-identity.ts +88 -0
  541. package/src/interactive/renderers/worker-entry.ts +32 -0
  542. package/src/interactive/slash-commands.ts +153 -20
  543. package/src/interactive/stream-pacing-policy.ts +0 -23
  544. package/src/interactive/theme/labels.ts +19 -13
  545. package/src/interactive/turn-context.ts +39 -20
  546. package/src/interactive/turn-recovery.ts +8 -0
  547. package/src/interactive/turn-runtime.ts +27 -11
  548. package/src/interactive/turn-state.ts +7 -0
  549. package/src/interactive/worker-receipts.ts +1 -0
  550. package/src/interactive/worker-stream.ts +6 -1
  551. package/src/interactive/yazi-bridge.ts +60 -6
  552. package/src/tools/agent-tools.ts +30 -1
  553. package/src/tools/artifact.ts +2 -2
  554. package/src/tools/ask-user.ts +3 -3
  555. package/src/tools/bash.ts +1 -1
  556. package/src/tools/bootstrap.ts +4 -0
  557. package/src/tools/builtin-tool-catalog.ts +52 -22
  558. package/src/tools/codewiki/code-nav-surface.ts +6 -0
  559. package/src/tools/codewiki/code-nav.ts +99 -13
  560. package/src/tools/context/docs-engine.ts +20 -7
  561. package/src/tools/context/index.ts +59 -21
  562. package/src/tools/core-bootstrap.ts +28 -6
  563. package/src/tools/credential-present.ts +1 -2
  564. package/src/tools/dispatch-arguments.ts +6 -1
  565. package/src/tools/dispatch-event-text.ts +10 -0
  566. package/src/tools/dispatch-plan.ts +49 -4
  567. package/src/tools/dispatch-run-events.ts +1 -1
  568. package/src/tools/dispatch-runner.ts +12 -0
  569. package/src/tools/dispatch-schema.ts +338 -0
  570. package/src/tools/dispatch-types.ts +3 -0
  571. package/src/tools/dispatch.ts +9 -254
  572. package/src/tools/ledger.ts +3 -5
  573. package/src/tools/monitor-surface.ts +5 -13
  574. package/src/tools/observation.ts +4 -5
  575. package/src/tools/panes-surface.ts +4 -11
  576. package/src/tools/panes.ts +4 -2
  577. package/src/tools/policy.ts +15 -2
  578. package/src/tools/read.ts +5 -6
  579. package/src/tools/registry.ts +41 -12
  580. package/src/tools/result-shaping.ts +18 -14
  581. package/src/tools/steer-surface.ts +1 -1
  582. package/src/tools/tasks.ts +1 -1
  583. package/src/tools/truncate.ts +6 -5
  584. package/src/tools/verify/surface.ts +6 -12
  585. package/src/tools/web-fetch-surface.ts +1 -3
  586. package/src/tools/worker-evidence.ts +3 -1
  587. package/src/worker/spec-contract.ts +4 -0
  588. package/dist/builtins-UJLMOVOV.js +0 -17
  589. package/dist/chunk-5QIAJV2D.js +0 -48
  590. package/dist/chunk-JZWT5J3Y.js +0 -814
  591. package/dist/chunk-K7VKOLQQ.js +0 -15
  592. package/dist/chunk-PMZCIOCJ.js +0 -25
  593. package/dist/chunk-SUW5DORT.js +0 -819
  594. package/dist/chunk-UOV2BYIW.js +0 -107
  595. package/dist/chunk-WR6U3OVP.js +0 -45
  596. package/dist/chunk-Y45G3AXC.js +0 -1558
  597. package/dist/reset-EOLM7GVE.js +0 -230
  598. package/dist/uninstall-N34PCTGJ.js +0 -331
  599. package/dist/upgrade-H7TOM7YL.js +0 -323
  600. package/docs/artifact-versions.md +0 -67
  601. package/docs/development-pipeline.md +0 -121
  602. package/docs/documentation-coverage.md +0 -46
  603. package/docs/documentation-guide.md +0 -167
  604. package/docs/time-conventions.md +0 -101
@@ -1,15 +1,14 @@
1
1
  import { createRequire as __clioCreateRequire } from "node:module"; const require = __clioCreateRequire(import.meta.url);
2
+ import {
3
+ planWikiGeneration
4
+ } from "./chunk-R6Q67RJH.js";
2
5
  import {
3
6
  loadFragments,
4
7
  renderCodewikiDigest
5
- } from "./chunk-3QSOM6PA.js";
8
+ } from "./chunk-Y3CBHOR6.js";
6
9
  import {
7
10
  loadMemoryRecordsSync
8
- } from "./chunk-74YWRRU5.js";
9
- import {
10
- createTomlFileReader,
11
- tomlTableAt
12
- } from "./chunk-LCGCVYZ4.js";
11
+ } from "./chunk-BEPZRGGU.js";
13
12
  import {
14
13
  WIKI_INDEX,
15
14
  WIKI_PLAN_FILE,
@@ -45,6 +44,10 @@ import {
45
44
  statePath,
46
45
  writeClioState
47
46
  } from "./chunk-MXHC5QYU.js";
47
+ import {
48
+ createTomlFileReader,
49
+ tomlTableAt
50
+ } from "./chunk-LCGCVYZ4.js";
48
51
  import {
49
52
  classifyProjectPreload
50
53
  } from "./chunk-JVCV3ICN.js";
@@ -52,6 +55,15 @@ import {
52
55
  compileGlobRegex,
53
56
  normalizeGlobInput
54
57
  } from "./chunk-VG7TBQIY.js";
58
+ import {
59
+ ceilChars
60
+ } from "./chunk-NZMNUPZZ.js";
61
+ import {
62
+ INTEROP_AGENT_KINDS
63
+ } from "./chunk-KXDSS5WJ.js";
64
+ import {
65
+ BusChannels
66
+ } from "./chunk-F4EKGO4N.js";
55
67
  import {
56
68
  computeFingerprintCached,
57
69
  isStale
@@ -66,15 +78,6 @@ import {
66
78
  import {
67
79
  enumerateWorkspaceFiles
68
80
  } from "./chunk-33YXPOE3.js";
69
- import {
70
- ceilChars
71
- } from "./chunk-CWVRRIEI.js";
72
- import {
73
- BusChannels
74
- } from "./chunk-HLW2MRKE.js";
75
- import {
76
- INTEROP_AGENT_KINDS
77
- } from "./chunk-IHXBNWMM.js";
78
81
  import {
79
82
  require_dist
80
83
  } from "./chunk-APJ265NV.js";
@@ -2998,126 +3001,6 @@ function normalizeRepoPath(sourceRoot, candidate) {
2998
3001
  return rel.split("\\").join("/");
2999
3002
  }
3000
3003
 
3001
- // src/domains/context/wiki/plan.ts
3002
- init_esm_shims();
3003
- var WIKI_DEPTH_STRATEGY = {
3004
- simple: { areaDepth: 1, areaShare: 0.08, minAreaLines: 400 },
3005
- medium: { areaDepth: 2, areaShare: 0.03, minAreaLines: 250 },
3006
- detailed: { areaDepth: 3, areaShare: 8e-3, minAreaLines: 150 }
3007
- };
3008
- var MAX_PAGE_SOURCES = 8;
3009
- function areaForPath(path, maxDepth) {
3010
- const directories = path.split("/").filter(Boolean).slice(0, -1);
3011
- if (directories.length === 0) return ".";
3012
- return directories.slice(0, Math.max(1, maxDepth)).join("/");
3013
- }
3014
- function classifyDepth(sourceFiles, sourceLines) {
3015
- if (sourceFiles <= 150 && sourceLines <= 3e4) return "simple";
3016
- if (sourceFiles <= 800 && sourceLines <= 15e4) return "medium";
3017
- return "detailed";
3018
- }
3019
- function slugSegment(segment) {
3020
- const slug = segment.toLowerCase().replace(/[^a-z0-9]+/g, "-").replace(/^-+|-+$/g, "");
3021
- return slug.length > 0 ? slug : "section";
3022
- }
3023
- function areaSegments(area) {
3024
- const parts = area.split("/").filter((part) => part.length > 0 && part !== ".");
3025
- if (parts.length === 0) return ["root"];
3026
- if (parts[0] !== "src") return parts;
3027
- return parts.length === 1 ? ["source"] : parts.slice(1);
3028
- }
3029
- function pagePathForArea(area) {
3030
- return `${areaSegments(area).map(slugSegment).join("/")}.md`;
3031
- }
3032
- function titleForArea(area) {
3033
- const name2 = areaSegments(area).join(" ").replace(/[-_]+/g, " ").trim();
3034
- return name2.length > 0 ? name2.charAt(0).toUpperCase() + name2.slice(1) : "Overview";
3035
- }
3036
- function rankedSources(files) {
3037
- return [...files].sort((a, b) => {
3038
- const roleRank = (file) => file.role === "entry" ? 0 : file.role === "test" ? 2 : 1;
3039
- return roleRank(a) - roleRank(b) || b.loc - a.loc || a.path.localeCompare(b.path);
3040
- }).slice(0, MAX_PAGE_SOURCES).map((file) => file.path);
3041
- }
3042
- function collectAreas(source, areaDepth) {
3043
- const byKey = /* @__PURE__ */ new Map();
3044
- for (const file of source) {
3045
- const key = areaForPath(file.path, areaDepth);
3046
- const area = byKey.get(key) ?? { key, files: [], lines: 0 };
3047
- area.files.push(file);
3048
- area.lines += Math.max(0, file.loc);
3049
- byKey.set(key, area);
3050
- }
3051
- return [...byKey.values()].sort((a, b) => b.lines - a.lines || a.key.localeCompare(b.key));
3052
- }
3053
- function overviewPage(source) {
3054
- const entries = source.filter((file) => file.role === "entry");
3055
- return {
3056
- path: "architecture.md",
3057
- title: "Architecture",
3058
- intent: "Explain what this repository is, its top-level composition, how a request or command flows through it, and where the boundaries between its major areas are.",
3059
- sources: rankedSources(entries.length > 0 ? entries : source),
3060
- status: "pending",
3061
- attempts: 0
3062
- };
3063
- }
3064
- function buildCandidatePlan(codewiki, depth) {
3065
- const source = codewiki.files.filter((file) => file.lang !== "config");
3066
- const totalLines = source.reduce((total, file) => total + Math.max(0, file.loc), 0);
3067
- const { areaDepth, areaShare, minAreaLines } = WIKI_DEPTH_STRATEGY[depth];
3068
- const threshold = Math.max(minAreaLines, Math.floor(totalLines * areaShare));
3069
- const areas = collectAreas(source, areaDepth);
3070
- const included = areas.filter((area) => area.lines >= threshold);
3071
- const selected = included.length > 0 ? included : areas.slice(0, 1);
3072
- const selectedKeys = new Set(selected.map((area) => area.key));
3073
- const extras = /* @__PURE__ */ new Map();
3074
- for (const area of areas) {
3075
- if (selectedKeys.has(area.key)) continue;
3076
- const ancestor = selected.find((candidate) => area.key.startsWith(`${candidate.key}/`));
3077
- const host = ancestor?.key ?? selected[0]?.key;
3078
- if (host === void 0) continue;
3079
- extras.set(host, [...extras.get(host) ?? [], ...area.files]);
3080
- }
3081
- const pages = selected.map((area) => {
3082
- const files = [...area.files, ...extras.get(area.key) ?? []];
3083
- return {
3084
- path: pagePathForArea(area.key),
3085
- title: titleForArea(area.key),
3086
- intent: `Document ${area.key} (${area.files.length} indexed files, ${area.lines} lines): what it owns, its entry points and important symbols, the state and lifecycle invariants it enforces, an upstream caller and a downstream dependency, the focused tests that prove its behavior, and what to watch when editing it.`,
3087
- sources: rankedSources(files),
3088
- status: "pending",
3089
- attempts: 0
3090
- };
3091
- });
3092
- return dedupePagePaths({
3093
- version: 1,
3094
- overview: "",
3095
- pages: [overviewPage(source), ...pages]
3096
- });
3097
- }
3098
- function dedupePagePaths(plan) {
3099
- const seen = /* @__PURE__ */ new Set();
3100
- const pages = [];
3101
- for (const page of plan.pages) {
3102
- let path = page.path;
3103
- let suffix = 2;
3104
- while (seen.has(path)) {
3105
- path = page.path.replace(/\.md$/, `-${suffix}.md`);
3106
- suffix += 1;
3107
- }
3108
- seen.add(path);
3109
- pages.push({ ...page, path });
3110
- }
3111
- return { ...plan, pages };
3112
- }
3113
- function planWikiGeneration(codewiki, requestedDepth = "auto") {
3114
- const source = codewiki.files.filter((file) => file.lang !== "config");
3115
- const sourceFiles = source.length;
3116
- const sourceLines = source.reduce((total, file) => total + Math.max(0, file.loc), 0);
3117
- const depth = requestedDepth === "auto" ? classifyDepth(sourceFiles, sourceLines) : requestedDepth;
3118
- return { requestedDepth, depth, sourceFiles, sourceLines, plan: buildCandidatePlan(codewiki, depth) };
3119
- }
3120
-
3121
3004
  // src/domains/context/wiki/generate.ts
3122
3005
  function progress2(input, event) {
3123
3006
  input.onProgress?.(event);
@@ -3621,7 +3504,6 @@ function persistState(cwd, fingerprint, indexedAt, prev, codewikiVersion, projec
3621
3504
  });
3622
3505
  }
3623
3506
  async function ensureCodewikiFresh(cwd) {
3624
- if (process.env.CLIO_CODER_BOOTSTRAP_GENERATE_CHILD === "1") return;
3625
3507
  const state = readClioState(cwd);
3626
3508
  if (!state && !existsSync8(codewikiPath(cwd))) return;
3627
3509
  const indexedAt = (/* @__PURE__ */ new Date()).toISOString();
@@ -4090,10 +3972,6 @@ export {
4090
3972
  loadProjectRules,
4091
3973
  selectActiveRules,
4092
3974
  assembleWikiTree,
4093
- WIKI_DEPTH_STRATEGY,
4094
- pagePathForArea,
4095
- buildCandidatePlan,
4096
- planWikiGeneration,
4097
3975
  runWikiGenerate,
4098
3976
  runContextRefresh,
4099
3977
  ContextDomainModule,
@@ -4101,4 +3979,4 @@ export {
4101
3979
  buildWikiPlanPrompt,
4102
3980
  buildWikiPagePrompt
4103
3981
  };
4104
- //# sourceMappingURL=chunk-C537JADH.js.map
3982
+ //# sourceMappingURL=chunk-KK4JZPBQ.js.map
@@ -2,7 +2,7 @@ import { createRequire as __clioCreateRequire } from "node:module"; const requir
2
2
  import {
3
3
  ensureYaziProfile,
4
4
  yaziProfileDir
5
- } from "./chunk-J5LZHVIT.js";
5
+ } from "./chunk-3M6DQK6S.js";
6
6
  import {
7
7
  describeResolution,
8
8
  resolveToolBinary,
@@ -549,6 +549,28 @@ function createMuxRuntime(options) {
549
549
  false
550
550
  );
551
551
  },
552
+ async focusSelf() {
553
+ if (anchorPaneId === null || !muxSupportsMethod(detection.server, "pane.focus")) return false;
554
+ return await attempt(
555
+ "focusSelf",
556
+ async (live) => {
557
+ await live.paneFocus(anchorPaneId);
558
+ return true;
559
+ },
560
+ false
561
+ );
562
+ },
563
+ async unzoomSelf() {
564
+ if (anchorPaneId === null || !muxSupportsMethod(detection.server, "pane.zoom")) return false;
565
+ return await attempt(
566
+ "unzoomSelf",
567
+ async (live) => {
568
+ const result = await live.paneZoom(anchorPaneId, "off");
569
+ return result.changed;
570
+ },
571
+ false
572
+ );
573
+ },
552
574
  async resizeDock(slot, share) {
553
575
  if (!docks) return false;
554
576
  return await attempt("resizeDock", () => docks.resize(slot, share), false);
@@ -1368,14 +1390,7 @@ async function detectMux(options = {}) {
1368
1390
  return { detection: none("panes are turned off"), client: null };
1369
1391
  }
1370
1392
  if (enabled === "embedded") {
1371
- return {
1372
- detection: none(
1373
- "embedded mode is not implemented yet; it ships in phase 5, so this session has no panes at all. Set panes.enabled=auto for guest mode inside a herdr session.",
1374
- [],
1375
- true
1376
- ),
1377
- client: null
1378
- };
1393
+ log("info", "interface.panes.enabled=embedded is not implemented yet; detecting a guest pane host instead");
1379
1394
  }
1380
1395
  if (env.HERDR_ENV !== "1") {
1381
1396
  return { detection: none("HERDR_ENV is not 1, so Clio is not running inside a pane host"), client: null };
@@ -1607,7 +1622,7 @@ function createYaziEventStream(options) {
1607
1622
  init_esm_shims();
1608
1623
  import { spawn } from "node:child_process";
1609
1624
  import { randomUUID } from "node:crypto";
1610
- import { mkdirSync, readFileSync, writeFileSync } from "node:fs";
1625
+ import { mkdirSync, readdirSync, readFileSync, rmSync, statSync as statSync2, writeFileSync } from "node:fs";
1611
1626
  import { join as join3 } from "node:path";
1612
1627
  function resolveYaziBinaries() {
1613
1628
  const entry = findPinnedTool("yazi");
@@ -1632,6 +1647,28 @@ function readOptional(path) {
1632
1647
  return "";
1633
1648
  }
1634
1649
  }
1650
+ var YAZI_STALE_TRANSPORT_MS = 24 * 60 * 60 * 1e3;
1651
+ function sweepStaleTransportFiles(sessionsDir, now = Date.now()) {
1652
+ let removed = 0;
1653
+ let entries;
1654
+ try {
1655
+ entries = readdirSync(sessionsDir);
1656
+ } catch {
1657
+ return 0;
1658
+ }
1659
+ for (const name of entries) {
1660
+ if (!/\.(stream|chooser|cwd)$/u.test(name)) continue;
1661
+ const path = join3(sessionsDir, name);
1662
+ try {
1663
+ if (now - statSync2(path).mtimeMs > YAZI_STALE_TRANSPORT_MS) {
1664
+ rmSync(path, { force: true });
1665
+ removed += 1;
1666
+ }
1667
+ } catch {
1668
+ }
1669
+ }
1670
+ return removed;
1671
+ }
1635
1672
  async function createYaziSession(options) {
1636
1673
  const binaries = (options.resolveBinaries ?? resolveYaziBinaries)();
1637
1674
  if (!binaries.yaziPath) {
@@ -1648,6 +1685,7 @@ async function createYaziSession(options) {
1648
1685
  const sessionId = options.sessionId ?? randomUUID();
1649
1686
  const sessionsDir = join3(cacheDir, "yazi", "sessions");
1650
1687
  mkdirSync(sessionsDir, { recursive: true });
1688
+ sweepStaleTransportFiles(sessionsDir);
1651
1689
  const managedProfile = options.profileMode === "managed" ? (options.ensureProfile ?? ensureYaziProfile)({
1652
1690
  yaPath: binaries.yaPath,
1653
1691
  yaziPath: binaries.yaziPath,
@@ -1681,10 +1719,14 @@ async function createYaziSession(options) {
1681
1719
  writeFileSync(cwdPath, "");
1682
1720
  argv = [binaries.yaziPath, options.cwd, "--chooser-file", chooserPath, "--cwd-file", cwdPath];
1683
1721
  }
1722
+ const removeTransportFiles = () => {
1723
+ for (const path of [streamPath, chooserPath, cwdPath]) rmSync(path, { force: true });
1724
+ };
1684
1725
  const pane = await options.mux.openUtilityPane({
1685
1726
  argv,
1686
1727
  cwd: options.cwd,
1687
- label: "yazi",
1728
+ label: "files",
1729
+ title: "files",
1688
1730
  // The files dock: split down from the anchor at the configured share.
1689
1731
  // Degrades to a plain split inside the contract when the layout tier is
1690
1732
  // absent.
@@ -1692,7 +1734,10 @@ async function createYaziSession(options) {
1692
1734
  ...Object.keys(env).length > 0 ? { env } : {},
1693
1735
  ...stdoutPath ? { stdoutPath } : {}
1694
1736
  });
1695
- if (!pane) return { status: "unavailable", reason: "pane host refused to open yazi" };
1737
+ if (!pane) {
1738
+ removeTransportFiles();
1739
+ return { status: "unavailable", reason: "the pane host refused to open the files pane" };
1740
+ }
1696
1741
  let paneCwd = options.cwd;
1697
1742
  let instanceId = null;
1698
1743
  let stream = null;
@@ -1705,6 +1750,7 @@ async function createYaziSession(options) {
1705
1750
  if (chooserTimer) clearInterval(chooserTimer);
1706
1751
  chooserTimer = null;
1707
1752
  options.onStopped?.(reason);
1753
+ removeTransportFiles();
1708
1754
  };
1709
1755
  if (options.mode === "companion") {
1710
1756
  stream = createYaziEventStream({
@@ -1720,7 +1766,9 @@ async function createYaziSession(options) {
1720
1766
  options.onEvent(event);
1721
1767
  }
1722
1768
  });
1723
- void stream.done.then((reason) => stop(reason));
1769
+ void stream.done.then((reason) => {
1770
+ stop(reason);
1771
+ });
1724
1772
  } else {
1725
1773
  const pollChooser = () => {
1726
1774
  if (stopped || alive()) return;
@@ -1782,4 +1830,4 @@ export {
1782
1830
  createYaziSession,
1783
1831
  createMuxDomainModule
1784
1832
  };
1785
- //# sourceMappingURL=chunk-K6BF4U2H.js.map
1833
+ //# sourceMappingURL=chunk-KKOJXO6R.js.map
@@ -94,8 +94,10 @@ var INTEROP_AGENT_KINDS = [
94
94
  id: "antigravity",
95
95
  label: "Antigravity CLI",
96
96
  binaryNames: ["agy"],
97
- userDir: ".antigravitycli",
98
- projectDir: ".antigravitycli",
97
+ userDir: ".gemini/antigravity-cli",
98
+ legacyUserDirs: [".antigravitycli"],
99
+ projectDir: ".gemini/antigravity-cli",
100
+ legacyProjectDirs: [".antigravitycli"],
99
101
  instructionFiles: []
100
102
  },
101
103
  {
@@ -123,7 +125,9 @@ function foreignAgentDirs() {
123
125
  const dirs = [];
124
126
  for (const kind of INTEROP_AGENT_KINDS) {
125
127
  dirs.push(`~/${kind.userDir}/`);
128
+ for (const legacy of kind.legacyUserDirs ?? []) dirs.push(`~/${legacy}/`);
126
129
  if (kind.projectDir !== void 0) dirs.push(`${kind.projectDir}/`);
130
+ for (const legacy of kind.legacyProjectDirs ?? []) dirs.push(`${legacy}/`);
127
131
  }
128
132
  return [...new Set(dirs)];
129
133
  }
@@ -134,4 +138,4 @@ export {
134
138
  interopSourceRank,
135
139
  foreignAgentDirs
136
140
  };
137
- //# sourceMappingURL=chunk-IHXBNWMM.js.map
141
+ //# sourceMappingURL=chunk-KXDSS5WJ.js.map
@@ -1,7 +1,7 @@
1
1
  import { createRequire as __clioCreateRequire } from "node:module"; const require = __clioCreateRequire(import.meta.url);
2
2
  import {
3
3
  isSessionEntry
4
- } from "./chunk-FSP7CMNU.js";
4
+ } from "./chunk-JGRC33J2.js";
5
5
  import {
6
6
  init_esm_shims
7
7
  } from "./chunk-3R73A4XB.js";
@@ -245,13 +245,11 @@ function applyMutation(board, mutation) {
245
245
  error: "done requires note as the evidence that the task actually finished (the command you ran, the file:line you verified). If the work did not happen, use block with a reason or drop it."
246
246
  };
247
247
  }
248
- if (target.status === "pending") {
249
- return {
250
- error: `task ${target.id} was never started, so it cannot be completed. Start it and do the work, or record the truth with block (reason) or drop.`
251
- };
252
- }
253
248
  }
254
249
  const notes = [];
250
+ if (mutation.op === "done" && target.status === "pending") {
251
+ notes.push(`started ${target.id} implicitly: done on a pending task records the start and the completion together`);
252
+ }
255
253
  const tasks = board.tasks.map((task) => {
256
254
  if (task.id !== target.id) {
257
255
  if (mutation.op === "start" && task.status === "active") {
@@ -373,4 +371,4 @@ export {
373
371
  foldSessionTaskHistory,
374
372
  createTaskBoardStore
375
373
  };
376
- //# sourceMappingURL=chunk-6DWBAZ5U.js.map
374
+ //# sourceMappingURL=chunk-L47TF46W.js.map