@inerrata-corporation/errata 2.0.2-dev.95 → 2.0.2-dev.981

This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
package/pass-worker.mjs CHANGED
@@ -144,7 +144,14 @@ var init_castalia = __esm({
144
144
  "SOLVED_BY",
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  "MITIGATES",
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  "REPORTED_FAILURE",
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- "CONTRADICTS"
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+ "CONTRADICTS",
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+ // Motif twin-faces (KN-twin-faces): failure-face motif → remedy-face motif
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+ // across layers (AntiPattern/Weakness ↔ Technique/Pattern). Same
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+ // problem→fix direction as FIXED_BY/SOLVED_BY. Minted by the nightly LLM
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+ // twin-face pass — these are the near-identical cross-layer pairs the
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+ // polarity gate (finding 5) correctly refuses to FUSE; the link carries
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+ // what fusion can't.
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+ "REMEDIED_BY"
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  ];
149
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  CONCEPTUAL_EDGES = [
150
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  "INSTANCE_OF",
@@ -259,6 +266,10 @@ var init_castalia = __esm({
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  // git topology, not signal-flow
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  "AUTHORED_BY",
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  // git authorship, not signal-flow
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+ "PRODUCED",
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+ // edit-episode provenance (Episode→symbol), not signal-flow — the family
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+ // above was excluded together but this member slipped the net (LC-produced-pagerank);
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+ // at 43% of all live edges it was the largest single edge population flowing rank
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  "CONTRIBUTED",
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  // agent attribution (Agent → knowledge), not signal-flow
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  "SUPERSEDES",
@@ -274,6 +285,10 @@ var init_castalia = __esm({
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  CAUSED_BY: 3,
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  FIXED_BY: 3,
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  SOLVED_BY: 3,
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+ // Twin-face link (failure motif → remedy motif, KN-twin-faces) — causal-grade
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+ // but a notch below witnessed FIXED_BY/SOLVED_BY: the pairing is an LLM
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+ // judgment over descriptions, not an agent-witnessed resolution.
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+ REMEDIED_BY: 2.5,
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  MANIFESTS_AS: 2,
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  ESCALATES_TO: 1.5,
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  AFFECTS: 1.2,
@@ -447,13 +462,18 @@ function resolveCanonical(label) {
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462
  function resolveCanonicalId(label) {
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463
  return resolveCanonical(label)?.id;
449
464
  }
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+ function resolveUnambiguousCanonicalId(label) {
466
+ const key = label.trim().toLowerCase();
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+ if (AMBIGUOUS_ALIASES.has(key)) return void 0;
468
+ return resolveCanonicalId(key);
469
+ }
450
470
  function aliasesLongestFirst() {
451
471
  const out2 = [];
452
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  for (const e of REGISTRY) for (const a of e.aliases) out2.push({ alias: a.toLowerCase(), entity: e });
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  out2.sort((x, y) => y.alias.length - x.alias.length);
454
474
  return out2;
455
475
  }
456
- var REGISTRY, BY_ALIAS;
476
+ var REGISTRY, AMBIGUOUS_ALIASES, BY_ALIAS;
457
477
  var init_taxonomy = __esm({
458
478
  "../../packages/shared/src/nlp/taxonomy.ts"() {
459
479
  "use strict";
@@ -502,6 +522,13 @@ var init_taxonomy = __esm({
502
522
  { id: "concept:retry", name: "retry", category: "concept", aliases: ["retry"] },
503
523
  { id: "concept:migration", name: "migration", category: "concept", aliases: ["migration"] }
504
524
  ];
525
+ AMBIGUOUS_ALIASES = /* @__PURE__ */ new Set([
526
+ "node",
527
+ "go",
528
+ "pool",
529
+ "spring",
530
+ "ws"
531
+ ]);
505
532
  BY_ALIAS = /* @__PURE__ */ new Map();
506
533
  for (const e of REGISTRY) {
507
534
  for (const a of e.aliases) {
@@ -563,7 +590,7 @@ function lemma(token) {
563
590
  }
564
591
  return token;
565
592
  }
566
- function conceptTokens(text) {
593
+ function tokenize(text, resolve) {
567
594
  const matches = text.normalize("NFC").toLowerCase().match(TOKEN_RE) ?? [];
568
595
  const out2 = /* @__PURE__ */ new Set();
569
596
  for (const raw of matches) {
@@ -573,11 +600,14 @@ function conceptTokens(text) {
573
600
  out2.add(token);
574
601
  continue;
575
602
  }
576
- const canonical = resolveCanonicalId(token);
603
+ const canonical = resolve(token);
577
604
  out2.add(canonical ?? lemma(token));
578
605
  }
579
606
  return [...out2].sort();
580
607
  }
608
+ function retrievalTokens(text) {
609
+ return tokenize(text, resolveUnambiguousCanonicalId);
610
+ }
581
611
  var STOPWORDS, NEGATION_TOKENS, TOKEN_RE;
582
612
  var init_concept_bag = __esm({
583
613
  "../../packages/shared/src/nlp/concept-bag.ts"() {
@@ -15058,7 +15088,12 @@ var init_edge_rules = __esm({
15058
15088
  // ── Taxonomy (Track 4 Stream C: MITRE CWE `ChildOf` → `Weakness —IS_A→ Weakness`) ──
15059
15089
  IS_A: { from: ["Weakness"], to: ["Weakness"] },
15060
15090
  // ── Conceptual (v1 taxonomy.ts: instance → motif/pattern reference) ──
15061
- INSTANCE_OF: { to: ["Pattern", "Weakness", "Technique"] },
15091
+ // `AntiPattern` joined the target set 2026-08-02: it is one of the three motif
15092
+ // kinds (generalizer motifs.ts `layerOf`: pattern | technique | antipattern) and
15093
+ // the SUPPRESSED-close path mints `Problem ─INSTANCE_OF→ AntiPattern` as the
15094
+ // negative-knowledge binding ("silenced, not solved") — the original three-label
15095
+ // rule predates AntiPattern joining the motif layer and silently ate that edge.
15096
+ INSTANCE_OF: { to: ["Pattern", "AntiPattern", "Weakness", "Technique"] },
15062
15097
  IMPLEMENTS: { from: ["Solution", "Language", "Component"], to: ["Pattern", "Technique"] },
15063
15098
  MATCHES: { to: ["Pattern"] },
15064
15099
  // ── Artifact evidence (v1 taxonomy.ts artifact rows) ──
@@ -15159,6 +15194,23 @@ var init_wire = __esm({
15159
15194
  /** Canonical human-readable description (no raw paths — daemon scrubs; server rechecks). */
15160
15195
  description: external_exports.string().min(1).max(4e3),
15161
15196
  attrs: external_exports.record(external_exports.string(), external_exports.unknown()).default({}),
15197
+ /** One-way origin key of the SESSION that minted this node (`ws_…`, a
15198
+ * truncated digest — never the raw session id). Stamped onto the created
15199
+ * node as `authoringSession`, which is the independence unit for the
15200
+ * evidence channels: the session that authored a claim may not corroborate
15201
+ * or refute it, while a DIFFERENT session on the same checkout may (alyssa,
15202
+ * 2026-07-31 — the workspace key made every witness on a single-checkout
15203
+ * deployment a self-corroboration). Optional + additive: absent leaves the
15204
+ * gate fail-open for that node, exactly today's behaviour. */
15205
+ originSession: external_exports.string().min(3).max(64).optional(),
15206
+ /** Epoch ms of the ORIGINATING local node's creation — when the knowledge was
15207
+ * actually captured, as opposed to when its public twin reached the cloud.
15208
+ * Stored as `observedAt`; the network board's chronological view orders on
15209
+ * it. Without this the wire carried NO timestamp at all, so a node captured
15210
+ * days ago surfaced as "new" the moment it was generalized and published —
15211
+ * the board showed ingest order wearing a chronology's clothes. Optional +
15212
+ * additive: absent keeps ingest-time ordering for that node. */
15213
+ originCreatedAtMs: external_exports.number().int().positive().optional(),
15162
15214
  extractionSource: external_exports.enum(INGEST_EXTRACTION_SOURCES),
15163
15215
  validationSource: external_exports.enum(VALIDATION_SOURCES).optional(),
15164
15216
  /** Org-membrane (M2): the daemon's anchor tag — it owns the lockfile, so it
@@ -15331,6 +15383,51 @@ var init_review = __esm({
15331
15383
  }
15332
15384
  });
15333
15385
 
15386
+ // ../../packages/local-shared/src/anchorable.ts
15387
+ function anchorableExtensionAlternation() {
15388
+ return BY_LENGTH.map((e) => e.slice(1).replace(/[+.]/g, (c) => `\\${c}`)).join("|");
15389
+ }
15390
+ var ANCHORABLE_EXTENSIONS, BY_LENGTH;
15391
+ var init_anchorable = __esm({
15392
+ "../../packages/local-shared/src/anchorable.ts"() {
15393
+ "use strict";
15394
+ ANCHORABLE_EXTENSIONS = /* @__PURE__ */ new Set([
15395
+ // typescript provider
15396
+ ".ts",
15397
+ ".tsx",
15398
+ ".js",
15399
+ ".jsx",
15400
+ ".mjs",
15401
+ ".cjs",
15402
+ // python / go / rust / ruby / csharp providers
15403
+ ".py",
15404
+ ".go",
15405
+ ".rs",
15406
+ ".rb",
15407
+ ".cs",
15408
+ // cpp provider — every variant it parses, not just the three that were listed
15409
+ ".c",
15410
+ ".h",
15411
+ ".cpp",
15412
+ ".cc",
15413
+ ".cxx",
15414
+ ".c++",
15415
+ ".hpp",
15416
+ ".hh",
15417
+ ".hxx",
15418
+ ".h++",
15419
+ // CUDA — the cpp provider parses these too. Missed when this list was first
15420
+ // transcribed by hand; the parity test caught them on its very first run,
15421
+ // which is the argument for the test existing.
15422
+ ".cu",
15423
+ ".cuh",
15424
+ // no provider yet; the grammar ships. Inert, not wrong — see above.
15425
+ ".java"
15426
+ ]);
15427
+ BY_LENGTH = [...ANCHORABLE_EXTENSIONS].sort((a, b) => b.length - a.length);
15428
+ }
15429
+ });
15430
+
15334
15431
  // ../../packages/local-shared/src/sqlite-adapter.ts
15335
15432
  function openDatabase(path) {
15336
15433
  const db = new DatabaseSync(path);
@@ -15343,6 +15440,7 @@ function openDatabase(path) {
15343
15440
  db.exec("PRAGMA journal_mode = WAL");
15344
15441
  db.exec("PRAGMA synchronous = NORMAL");
15345
15442
  db.exec("PRAGMA busy_timeout = 5000");
15443
+ db.exec("PRAGMA journal_size_limit = 67108864");
15346
15444
  } catch {
15347
15445
  }
15348
15446
  }
@@ -15378,7 +15476,7 @@ function openDatabase(path) {
15378
15476
  return db.prepare(`PRAGMA ${key}`).get();
15379
15477
  },
15380
15478
  transaction(fn) {
15381
- db.exec("BEGIN");
15479
+ db.exec("BEGIN IMMEDIATE");
15382
15480
  try {
15383
15481
  const r = fn();
15384
15482
  db.exec("COMMIT");
@@ -15432,10 +15530,92 @@ var init_src2 = __esm({
15432
15530
  init_profile();
15433
15531
  init_daemon_wire();
15434
15532
  init_review();
15533
+ init_anchorable();
15435
15534
  init_sqlite_adapter();
15436
15535
  }
15437
15536
  });
15438
15537
 
15538
+ // ../../packages/indexer/src/parse-cache.ts
15539
+ import { createHash as createHash2 } from "node:crypto";
15540
+ import { existsSync, mkdirSync, readFileSync, readdirSync, rmSync, statSync, writeFileSync } from "node:fs";
15541
+ import { homedir } from "node:os";
15542
+ import { join } from "node:path";
15543
+ function parseCacheDir() {
15544
+ return process.env["ERRATA_PARSE_CACHE"] ?? join(homedir(), ".errata", "parse-cache");
15545
+ }
15546
+ function parseCacheKey(source, providerId) {
15547
+ return createHash2("sha256").update(`${PARSE_CACHE_VERSION}:${providerId}:${source}`).digest("hex");
15548
+ }
15549
+ function entryPath(dir, key) {
15550
+ return join(dir, key.slice(0, 2), `${key.slice(2)}.json`);
15551
+ }
15552
+ function readParseCache(dir, key) {
15553
+ const file2 = entryPath(dir, key);
15554
+ try {
15555
+ const raw = readFileSync(file2, "utf8");
15556
+ const parsed = JSON.parse(raw);
15557
+ if (parsed.v !== PARSE_CACHE_VERSION || !Array.isArray(parsed.symbols)) return null;
15558
+ return { symbols: parsed.symbols, reExports: parsed.reExports ?? [] };
15559
+ } catch {
15560
+ return null;
15561
+ }
15562
+ }
15563
+ function writeParseCache(dir, key, providerId, value) {
15564
+ try {
15565
+ const envelope = {
15566
+ v: PARSE_CACHE_VERSION,
15567
+ provider: providerId,
15568
+ symbols: value.symbols,
15569
+ reExports: value.reExports
15570
+ };
15571
+ const body2 = JSON.stringify(envelope);
15572
+ if (body2.length > MAX_ENTRY_BYTES) return;
15573
+ const file2 = entryPath(dir, key);
15574
+ mkdirSync(join(dir, key.slice(0, 2)), { recursive: true });
15575
+ writeFileSync(file2, body2);
15576
+ } catch {
15577
+ }
15578
+ }
15579
+ function sweepParseCacheOnce(dir, now = Date.now()) {
15580
+ if (sweptThisProcess) return 0;
15581
+ sweptThisProcess = true;
15582
+ let removed = 0;
15583
+ try {
15584
+ if (!existsSync(dir)) return 0;
15585
+ for (const bucket of readdirSync(dir)) {
15586
+ const bucketDir = join(dir, bucket);
15587
+ let names;
15588
+ try {
15589
+ names = readdirSync(bucketDir);
15590
+ } catch {
15591
+ continue;
15592
+ }
15593
+ for (const name2 of names) {
15594
+ const file2 = join(bucketDir, name2);
15595
+ try {
15596
+ if (now - statSync(file2).mtimeMs > ENTRY_TTL_MS) {
15597
+ rmSync(file2, { force: true });
15598
+ removed++;
15599
+ }
15600
+ } catch {
15601
+ }
15602
+ }
15603
+ }
15604
+ } catch {
15605
+ }
15606
+ return removed;
15607
+ }
15608
+ var PARSE_CACHE_VERSION, ENTRY_TTL_MS, MAX_ENTRY_BYTES, sweptThisProcess;
15609
+ var init_parse_cache = __esm({
15610
+ "../../packages/indexer/src/parse-cache.ts"() {
15611
+ "use strict";
15612
+ PARSE_CACHE_VERSION = 1;
15613
+ ENTRY_TTL_MS = 30 * 24 * 60 * 60 * 1e3;
15614
+ MAX_ENTRY_BYTES = 2 * 1024 * 1024;
15615
+ sweptThisProcess = false;
15616
+ }
15617
+ });
15618
+
15439
15619
  // ../../packages/indexer/src/simhash.ts
15440
15620
  function fnv1a64(s) {
15441
15621
  let h = FNV_OFFSET;
@@ -15454,7 +15634,7 @@ function popcount(x) {
15454
15634
  }
15455
15635
  return c;
15456
15636
  }
15457
- function tokenize(text) {
15637
+ function tokenize2(text) {
15458
15638
  return text.match(/[A-Za-z_$][A-Za-z0-9_$]*|\d+|[^\s\w]/g) ?? [];
15459
15639
  }
15460
15640
  function shingle(tokens, n = SHINGLE_N) {
@@ -15483,7 +15663,7 @@ function simhashFeatures(features) {
15483
15663
  return out2;
15484
15664
  }
15485
15665
  function simhash(text) {
15486
- return simhashFeatures(shingle(tokenize(text)));
15666
+ return simhashFeatures(shingle(tokenize2(text)));
15487
15667
  }
15488
15668
  function hammingDistance(a, b) {
15489
15669
  return popcount((a ^ b) & MASK64);
@@ -15659,10 +15839,10 @@ var init_identity2 = __esm({
15659
15839
  });
15660
15840
 
15661
15841
  // ../../packages/indexer/src/pipeline.ts
15662
- import { appendFileSync, readFileSync, statSync } from "node:fs";
15842
+ import { appendFileSync, readFileSync as readFileSync2, statSync as statSync2 } from "node:fs";
15663
15843
  import { readdir } from "node:fs/promises";
15664
- import { extname, join, relative, sep } from "node:path";
15665
- import { createHash as createHash2 } from "node:crypto";
15844
+ import { extname, join as join2, relative, sep } from "node:path";
15845
+ import { createHash as createHash3 } from "node:crypto";
15666
15846
  import { execFileSync } from "node:child_process";
15667
15847
  function nowTs() {
15668
15848
  return indexNow ?? Date.now();
@@ -15671,7 +15851,7 @@ function fingerprintOf(signature, bodyHash) {
15671
15851
  return `${signature ?? ""}|${bodyHash ?? ""}`;
15672
15852
  }
15673
15853
  function sha(s) {
15674
- return createHash2("sha256").update(s).digest("hex").slice(0, 16);
15854
+ return createHash3("sha256").update(s).digest("hex").slice(0, 16);
15675
15855
  }
15676
15856
  function fileNodeId(workspaceId, relPath) {
15677
15857
  return `file_${sha(workspaceId + ":" + relPath.replace(/\\/g, "/"))}`;
@@ -15791,10 +15971,11 @@ async function incrementalReindex(store2, rootPath, workspaceId, changedAbsPaths
15791
15971
  };
15792
15972
  }
15793
15973
  const fileHashes = /* @__PURE__ */ new Map();
15974
+ const contentMovedPaths = /* @__PURE__ */ new Set();
15794
15975
  for (const rel of [...changedRelPaths]) {
15795
15976
  let h;
15796
15977
  try {
15797
- h = createHash2("sha256").update(readFileSync(join(rootPath, rel))).digest("hex");
15978
+ h = createHash3("sha256").update(readFileSync2(join2(rootPath, rel))).digest("hex");
15798
15979
  } catch {
15799
15980
  continue;
15800
15981
  }
@@ -15803,6 +15984,8 @@ async function incrementalReindex(store2, rootPath, workspaceId, changedAbsPaths
15803
15984
  if (fnode && fnode.attrs["contentHash"] === h && !fileHasStrandedSymbol(store2, fnode.id)) {
15804
15985
  store2.updateNode(fnode.id, { lastUpdatedAt: t });
15805
15986
  changedRelPaths.delete(rel);
15987
+ } else if (!fnode || fnode.attrs["contentHash"] !== h) {
15988
+ contentMovedPaths.add(rel);
15806
15989
  }
15807
15990
  }
15808
15991
  if (changedRelPaths.size === 0) {
@@ -15841,13 +16024,13 @@ async function incrementalReindex(store2, rootPath, workspaceId, changedAbsPaths
15841
16024
  let parsedFiles = 0;
15842
16025
  for (const rel of changedRelPaths) {
15843
16026
  if (parsedFiles++ > 0) await new Promise((r2) => setImmediate(r2));
15844
- const abs = join(rootPath, ...rel.split("/"));
16027
+ const abs = join2(rootPath, ...rel.split("/"));
15845
16028
  const ext = extname(abs).toLowerCase();
15846
16029
  const provider = providers.find((p) => p.fileExtensions.includes(ext));
15847
16030
  if (!provider) continue;
15848
16031
  let symbols;
15849
16032
  try {
15850
- symbols = provider.extractSymbols(readFileSync(abs, "utf8"), abs);
16033
+ symbols = provider.extractSymbols(readFileSync2(abs, "utf8"), abs);
15851
16034
  } catch {
15852
16035
  continue;
15853
16036
  }
@@ -15937,6 +16120,7 @@ async function incrementalReindex(store2, rootPath, workspaceId, changedAbsPaths
15937
16120
  changedRelPaths
15938
16121
  });
15939
16122
  store2.transaction(() => {
16123
+ store2.reviveReobserved([...changedRelPaths], workspaceId, t);
15940
16124
  const versionedAndFile = /* @__PURE__ */ new Set([...VERSIONED_LABELS, "File"]);
15941
16125
  const ownedLive = [];
15942
16126
  for (const n of store2.nodesByRelPath([...changedRelPaths])) {
@@ -16045,7 +16229,14 @@ async function incrementalReindex(store2, rootPath, workspaceId, changedAbsPaths
16045
16229
  const h = fileHashes.get(rel);
16046
16230
  if (!h) continue;
16047
16231
  const fnode = store2.getNode(fileNodeId(workspaceId, rel));
16048
- if (fnode) store2.updateNode(fnode.id, { attrs: { ...fnode.attrs, contentHash: h } });
16232
+ if (!fnode) continue;
16233
+ store2.updateNode(fnode.id, {
16234
+ attrs: {
16235
+ ...fnode.attrs,
16236
+ contentHash: h,
16237
+ ...contentMovedPaths.has(rel) ? { contentChangedAt: t } : {}
16238
+ }
16239
+ });
16049
16240
  }
16050
16241
  return {
16051
16242
  filesReindexed: changedRelPaths.size,
@@ -16093,8 +16284,13 @@ async function runIndexer(store2, opts) {
16093
16284
  byLanguage: {},
16094
16285
  durationMs: 0,
16095
16286
  nodesPurged: 0,
16096
- edgesPurged: 0
16287
+ edgesPurged: 0,
16288
+ parseCacheHits: 0,
16289
+ parseCacheMisses: 0
16097
16290
  };
16291
+ const cacheDir = parseCacheDir();
16292
+ const parseCacheEnabled = cacheDir !== "";
16293
+ if (parseCacheEnabled) sweepParseCacheOnce(cacheDir);
16098
16294
  if (opts.clean) {
16099
16295
  const purge = purgeWorkspaceCodeGraph(store2, opts.workspaceId);
16100
16296
  report.nodesPurged = purge.nodes;
@@ -16148,25 +16344,38 @@ async function runIndexer(store2, opts) {
16148
16344
  }
16149
16345
  let source;
16150
16346
  try {
16151
- const st = statSync(f.absPath);
16347
+ const st = statSync2(f.absPath);
16152
16348
  if (st.size > maxBytes) {
16153
16349
  report.filesSkipped++;
16154
16350
  continue;
16155
16351
  }
16156
- source = readFileSync(f.absPath, "utf8");
16352
+ source = readFileSync2(f.absPath, "utf8");
16157
16353
  } catch {
16158
16354
  report.filesSkipped++;
16159
16355
  continue;
16160
16356
  }
16357
+ const cacheKey = parseCacheKey(source, f.provider.id);
16358
+ const cached2 = parseCacheEnabled ? readParseCache(cacheDir, cacheKey) : null;
16161
16359
  let symbols;
16162
- try {
16163
- symbols = f.provider.extractSymbols(source, f.absPath);
16164
- } catch {
16165
- report.filesSkipped++;
16166
- continue;
16360
+ let reExports;
16361
+ if (cached2) {
16362
+ symbols = cached2.symbols;
16363
+ reExports = cached2.reExports;
16364
+ report.parseCacheHits++;
16365
+ } else {
16366
+ try {
16367
+ symbols = f.provider.extractSymbols(source, f.absPath);
16368
+ } catch {
16369
+ report.filesSkipped++;
16370
+ continue;
16371
+ }
16372
+ reExports = scanReExports(source);
16373
+ report.parseCacheMisses++;
16374
+ if (parseCacheEnabled) {
16375
+ writeParseCache(cacheDir, cacheKey, f.provider.id, { symbols, reExports });
16376
+ }
16167
16377
  }
16168
16378
  symbolsByFile.set(f.relPath, symbols);
16169
- const reExports = scanReExports(source);
16170
16379
  if (reExports.length > 0) reExportsByFile.set(f.relPath, reExports);
16171
16380
  report.filesParsed++;
16172
16381
  report.byLanguage[f.provider.id] = (report.byLanguage[f.provider.id] ?? 0) + 1;
@@ -16211,7 +16420,7 @@ async function runIndexer(store2, opts) {
16211
16420
  const depth = fileNode.relPath.split("/").length;
16212
16421
  if (depth !== 3) continue;
16213
16422
  try {
16214
- const pkg = JSON.parse(readFileSync(fileNode.absPath, "utf8"));
16423
+ const pkg = JSON.parse(readFileSync2(fileNode.absPath, "utf8"));
16215
16424
  if (!pkg.name) continue;
16216
16425
  const pkgDir = fileNode.relPath.replace(/\/package\.json$/, "");
16217
16426
  const candidates = [
@@ -16593,7 +16802,7 @@ async function scan(root, current, ignores, providers, out2) {
16593
16802
  for (const ent of entries) {
16594
16803
  if (ignores.has(ent.name)) continue;
16595
16804
  if (ent.name.startsWith(".") && ent.name !== ".") continue;
16596
- const abs = join(current, ent.name);
16805
+ const abs = join2(current, ent.name);
16597
16806
  if (ent.isDirectory()) {
16598
16807
  await scan(root, abs, ignores, providers, out2);
16599
16808
  } else if (ent.isFile()) {
@@ -16602,7 +16811,7 @@ async function scan(root, current, ignores, providers, out2) {
16602
16811
  const rel = relative(root, abs).split(sep).join("/");
16603
16812
  let size = 0;
16604
16813
  try {
16605
- size = statSync(abs).size;
16814
+ size = statSync2(abs).size;
16606
16815
  } catch {
16607
16816
  continue;
16608
16817
  }
@@ -16616,7 +16825,7 @@ async function scan(root, current, ignores, providers, out2) {
16616
16825
  }
16617
16826
  }
16618
16827
  }
16619
- function gitListFiles(root, ignores, providers) {
16828
+ function gitListRelPaths(root, ignores) {
16620
16829
  let stdout;
16621
16830
  try {
16622
16831
  stdout = execFileSync(
@@ -16639,10 +16848,19 @@ function gitListFiles(root, ignores, providers) {
16639
16848
  if (segs.some((s) => ignores.has(s) || s.startsWith(".") && s.length > 1)) {
16640
16849
  continue;
16641
16850
  }
16642
- const abs = join(root, rel);
16851
+ out2.push(rel);
16852
+ }
16853
+ return out2;
16854
+ }
16855
+ function gitListFiles(root, ignores, providers) {
16856
+ const rels = gitListRelPaths(root, ignores);
16857
+ if (rels === null) return null;
16858
+ const out2 = [];
16859
+ for (const rel of rels) {
16860
+ const abs = join2(root, rel);
16643
16861
  let size;
16644
16862
  try {
16645
- size = statSync(abs).size;
16863
+ size = statSync2(abs).size;
16646
16864
  } catch {
16647
16865
  continue;
16648
16866
  }
@@ -16662,7 +16880,7 @@ function upsertFile(store2, id, f, workspaceId) {
16662
16880
  const now = nowTs();
16663
16881
  let contentHash;
16664
16882
  try {
16665
- contentHash = createHash2("sha256").update(readFileSync(f.absPath)).digest("hex");
16883
+ contentHash = createHash3("sha256").update(readFileSync2(f.absPath)).digest("hex");
16666
16884
  } catch {
16667
16885
  }
16668
16886
  const node = {
@@ -16861,6 +17079,7 @@ var init_pipeline = __esm({
16861
17079
  "../../packages/indexer/src/pipeline.ts"() {
16862
17080
  "use strict";
16863
17081
  init_src2();
17082
+ init_parse_cache();
16864
17083
  init_identity2();
16865
17084
  DEFAULT_IGNORES = /* @__PURE__ */ new Set([
16866
17085
  "node_modules",
@@ -21025,8 +21244,8 @@ ${JSON.stringify(symbolNames, null, 2)}`);
21025
21244
 
21026
21245
  // ../../packages/indexer/src/languages/tree-sitter-loader.ts
21027
21246
  import { fileURLToPath } from "node:url";
21028
- import { dirname, join as join2 } from "node:path";
21029
- import { existsSync, readdirSync } from "node:fs";
21247
+ import { dirname, join as join3 } from "node:path";
21248
+ import { existsSync as existsSync2, readdirSync as readdirSync2 } from "node:fs";
21030
21249
  import { createRequire } from "node:module";
21031
21250
  function entryDir() {
21032
21251
  try {
@@ -21040,27 +21259,27 @@ function entryDir() {
21040
21259
  }
21041
21260
  function findWasmDir() {
21042
21261
  const here = entryDir();
21043
- const seaWasm = join2(here, "resources", "wasm");
21044
- if (existsSync(join2(seaWasm, "tree-sitter-typescript.wasm"))) return seaWasm;
21262
+ const seaWasm = join3(here, "resources", "wasm");
21263
+ if (existsSync2(join3(seaWasm, "tree-sitter-typescript.wasm"))) return seaWasm;
21045
21264
  let dir = here;
21046
21265
  for (let i2 = 0; i2 < 6; i2++) {
21047
- const flat = join2(
21266
+ const flat = join3(
21048
21267
  dir,
21049
21268
  "node_modules",
21050
21269
  "@vscode",
21051
21270
  "tree-sitter-wasm",
21052
21271
  "wasm"
21053
21272
  );
21054
- if (existsSync(join2(flat, "tree-sitter-typescript.wasm"))) return flat;
21273
+ if (existsSync2(join3(flat, "tree-sitter-typescript.wasm"))) return flat;
21055
21274
  dir = dirname(dir);
21056
21275
  }
21057
21276
  let root = here;
21058
21277
  for (let i2 = 0; i2 < 6; i2++) {
21059
- const pnpmDir = join2(root, "node_modules", ".pnpm");
21060
- if (existsSync(pnpmDir)) {
21061
- for (const entry of readdirSync(pnpmDir)) {
21278
+ const pnpmDir = join3(root, "node_modules", ".pnpm");
21279
+ if (existsSync2(pnpmDir)) {
21280
+ for (const entry of readdirSync2(pnpmDir)) {
21062
21281
  if (entry.startsWith("@vscode+tree-sitter-wasm@")) {
21063
- const candidate = join2(
21282
+ const candidate = join3(
21064
21283
  pnpmDir,
21065
21284
  entry,
21066
21285
  "node_modules",
@@ -21068,7 +21287,7 @@ function findWasmDir() {
21068
21287
  "tree-sitter-wasm",
21069
21288
  "wasm"
21070
21289
  );
21071
- if (existsSync(join2(candidate, "tree-sitter-typescript.wasm"))) {
21290
+ if (existsSync2(join3(candidate, "tree-sitter-typescript.wasm"))) {
21072
21291
  return candidate;
21073
21292
  }
21074
21293
  }
@@ -21082,27 +21301,27 @@ function findWasmDir() {
21082
21301
  }
21083
21302
  function findRuntimeDir() {
21084
21303
  const here = entryDir();
21085
- const seaRuntime = join2(here, "resources", "wasm");
21086
- if (existsSync(join2(seaRuntime, "web-tree-sitter.wasm"))) return seaRuntime;
21304
+ const seaRuntime = join3(here, "resources", "wasm");
21305
+ if (existsSync2(join3(seaRuntime, "web-tree-sitter.wasm"))) return seaRuntime;
21087
21306
  let dir = here;
21088
21307
  for (let i2 = 0; i2 < 6; i2++) {
21089
- const flat = join2(dir, "node_modules", "web-tree-sitter");
21090
- if (existsSync(join2(flat, "web-tree-sitter.wasm"))) return flat;
21308
+ const flat = join3(dir, "node_modules", "web-tree-sitter");
21309
+ if (existsSync2(join3(flat, "web-tree-sitter.wasm"))) return flat;
21091
21310
  dir = dirname(dir);
21092
21311
  }
21093
21312
  let root = here;
21094
21313
  for (let i2 = 0; i2 < 6; i2++) {
21095
- const pnpmDir = join2(root, "node_modules", ".pnpm");
21096
- if (existsSync(pnpmDir)) {
21097
- for (const entry of readdirSync(pnpmDir)) {
21314
+ const pnpmDir = join3(root, "node_modules", ".pnpm");
21315
+ if (existsSync2(pnpmDir)) {
21316
+ for (const entry of readdirSync2(pnpmDir)) {
21098
21317
  if (entry.startsWith("web-tree-sitter@")) {
21099
- const candidate = join2(
21318
+ const candidate = join3(
21100
21319
  pnpmDir,
21101
21320
  entry,
21102
21321
  "node_modules",
21103
21322
  "web-tree-sitter"
21104
21323
  );
21105
- if (existsSync(join2(candidate, "web-tree-sitter.wasm"))) {
21324
+ if (existsSync2(join3(candidate, "web-tree-sitter.wasm"))) {
21106
21325
  return candidate;
21107
21326
  }
21108
21327
  }
@@ -21119,7 +21338,7 @@ async function loadWebTreeSitter() {
21119
21338
  void err2;
21120
21339
  }
21121
21340
  const here = entryDir();
21122
- const seaResourceBase = join2(here, "resources", "_resolve.js");
21341
+ const seaResourceBase = join3(here, "resources", "_resolve.js");
21123
21342
  const resourceRequire = createRequire(seaResourceBase);
21124
21343
  return resourceRequire("web-tree-sitter");
21125
21344
  }
@@ -21134,9 +21353,9 @@ async function ensureTreeSitterReady() {
21134
21353
  await Parser2.init({
21135
21354
  locateFile: (name2) => {
21136
21355
  if (name2 === "tree-sitter.wasm" || name2 === "web-tree-sitter.wasm") {
21137
- return join2(runtime, name2);
21356
+ return join3(runtime, name2);
21138
21357
  }
21139
- return join2(grammars, name2);
21358
+ return join3(grammars, name2);
21140
21359
  }
21141
21360
  });
21142
21361
  })();
@@ -21148,7 +21367,7 @@ async function loadGrammar(name2) {
21148
21367
  if (cached2) return cached2;
21149
21368
  if (!languageClass) throw new Error("tree-sitter not initialized");
21150
21369
  const grammars = findWasmDir();
21151
- const lang = await languageClass.load(join2(grammars, `${name2}.wasm`));
21370
+ const lang = await languageClass.load(join3(grammars, `${name2}.wasm`));
21152
21371
  grammarCache.set(name2, lang);
21153
21372
  return lang;
21154
21373
  }
@@ -21171,7 +21390,7 @@ var init_tree_sitter_loader = __esm({
21171
21390
  });
21172
21391
 
21173
21392
  // ../../packages/indexer/src/languages/typescript-treesitter.ts
21174
- import { createHash as createHash3 } from "node:crypto";
21393
+ import { createHash as createHash4 } from "node:crypto";
21175
21394
  function extractNode(node, source, containerQname, containerKind) {
21176
21395
  switch (node.type) {
21177
21396
  case "function_declaration":
@@ -21384,7 +21603,7 @@ function scopeRecord(kind, name2, qname, node, body2, source) {
21384
21603
  const sig = header.replace(/\s+/g, " ").trim();
21385
21604
  if (sig) rec.signature = sig;
21386
21605
  const bodyText = source.slice(body2.startIndex, body2.endIndex);
21387
- rec.bodyHash = createHash3("sha256").update(bodyText).digest("hex").slice(0, 16);
21606
+ rec.bodyHash = createHash4("sha256").update(bodyText).digest("hex").slice(0, 16);
21388
21607
  rec.bodySimhash = toHex(simhash(bodyText));
21389
21608
  }
21390
21609
  }
@@ -21826,14 +22045,14 @@ var init_typescript_treesitter = __esm({
21826
22045
  });
21827
22046
 
21828
22047
  // ../../packages/indexer/src/languages/python-treesitter.ts
21829
- import { createHash as createHash4 } from "node:crypto";
22048
+ import { createHash as createHash5 } from "node:crypto";
21830
22049
  function sigAndHash(node, body2, source) {
21831
22050
  if (!body2) return {};
21832
22051
  const out2 = {};
21833
22052
  const sig = source.slice(node.startIndex, body2.startIndex).replace(/\s+/g, " ").trim();
21834
22053
  if (sig) out2.signature = sig;
21835
22054
  const bodyText = source.slice(body2.startIndex, body2.endIndex);
21836
- out2.bodyHash = createHash4("sha256").update(bodyText).digest("hex").slice(0, 16);
22055
+ out2.bodyHash = createHash5("sha256").update(bodyText).digest("hex").slice(0, 16);
21837
22056
  out2.bodySimhash = toHex(simhash(bodyText));
21838
22057
  return out2;
21839
22058
  }
@@ -22246,7 +22465,7 @@ var init_python_treesitter = __esm({
22246
22465
  });
22247
22466
 
22248
22467
  // ../../packages/indexer/src/languages/cpp-treesitter.ts
22249
- import { createHash as createHash5 } from "node:crypto";
22468
+ import { createHash as createHash6 } from "node:crypto";
22250
22469
  function extractNode3(node, containerQname, containerIsClass, source) {
22251
22470
  switch (node.type) {
22252
22471
  case "function_definition":
@@ -22430,7 +22649,7 @@ function sigAndHash2(node, body2, source) {
22430
22649
  const sig = source.slice(node.startIndex, body2.startIndex).replace(/\s+/g, " ").trim();
22431
22650
  if (sig) out2.signature = sig;
22432
22651
  const bodyText = source.slice(body2.startIndex, body2.endIndex);
22433
- out2.bodyHash = createHash5("sha256").update(bodyText).digest("hex").slice(0, 16);
22652
+ out2.bodyHash = createHash6("sha256").update(bodyText).digest("hex").slice(0, 16);
22434
22653
  out2.bodySimhash = toHex(simhash(bodyText));
22435
22654
  return out2;
22436
22655
  }
@@ -22591,7 +22810,7 @@ var init_cpp_treesitter = __esm({
22591
22810
  });
22592
22811
 
22593
22812
  // ../../packages/indexer/src/languages/go-treesitter.ts
22594
- import { createHash as createHash6 } from "node:crypto";
22813
+ import { createHash as createHash7 } from "node:crypto";
22595
22814
  function extractNode4(node, containerQname, source) {
22596
22815
  switch (node.type) {
22597
22816
  case "function_declaration": {
@@ -22753,7 +22972,7 @@ function sigAndHash3(node, body2, source) {
22753
22972
  const sig = source.slice(node.startIndex, body2.startIndex).replace(/\s+/g, " ").trim();
22754
22973
  if (sig) out2.signature = sig;
22755
22974
  const bodyText = source.slice(body2.startIndex, body2.endIndex);
22756
- out2.bodyHash = createHash6("sha256").update(bodyText).digest("hex").slice(0, 16);
22975
+ out2.bodyHash = createHash7("sha256").update(bodyText).digest("hex").slice(0, 16);
22757
22976
  out2.bodySimhash = toHex(simhash(bodyText));
22758
22977
  return out2;
22759
22978
  }
@@ -22897,7 +23116,7 @@ var init_go_treesitter = __esm({
22897
23116
  });
22898
23117
 
22899
23118
  // ../../packages/indexer/src/languages/rust-treesitter.ts
22900
- import { createHash as createHash7 } from "node:crypto";
23119
+ import { createHash as createHash8 } from "node:crypto";
22901
23120
  function extractNode5(node, containerQname, containerIsClass, source) {
22902
23121
  switch (node.type) {
22903
23122
  case "function_item":
@@ -23112,7 +23331,7 @@ function sigAndHash4(node, body2, source) {
23112
23331
  const sig = source.slice(node.startIndex, body2.startIndex).replace(/\s+/g, " ").trim();
23113
23332
  if (sig) out2.signature = sig;
23114
23333
  const bodyText = source.slice(body2.startIndex, body2.endIndex);
23115
- out2.bodyHash = createHash7("sha256").update(bodyText).digest("hex").slice(0, 16);
23334
+ out2.bodyHash = createHash8("sha256").update(bodyText).digest("hex").slice(0, 16);
23116
23335
  out2.bodySimhash = toHex(simhash(bodyText));
23117
23336
  return out2;
23118
23337
  }
@@ -23263,7 +23482,7 @@ var init_rust_treesitter = __esm({
23263
23482
  });
23264
23483
 
23265
23484
  // ../../packages/indexer/src/languages/ruby-treesitter.ts
23266
- import { createHash as createHash8 } from "node:crypto";
23485
+ import { createHash as createHash9 } from "node:crypto";
23267
23486
  function sigAndHash5(node, body2, source) {
23268
23487
  if (!body2) {
23269
23488
  const sig2 = source.slice(node.startIndex, node.endIndex).replace(/\s+/g, " ").trim();
@@ -23273,7 +23492,7 @@ function sigAndHash5(node, body2, source) {
23273
23492
  const sig = source.slice(node.startIndex, body2.startIndex).replace(/\s+/g, " ").trim();
23274
23493
  if (sig) out2.signature = sig;
23275
23494
  const bodyText = source.slice(body2.startIndex, body2.endIndex);
23276
- out2.bodyHash = createHash8("sha256").update(bodyText).digest("hex").slice(0, 16);
23495
+ out2.bodyHash = createHash9("sha256").update(bodyText).digest("hex").slice(0, 16);
23277
23496
  out2.bodySimhash = toHex(simhash(bodyText));
23278
23497
  return out2;
23279
23498
  }
@@ -23619,7 +23838,7 @@ var init_ruby_treesitter = __esm({
23619
23838
  });
23620
23839
 
23621
23840
  // ../../packages/indexer/src/languages/csharp-treesitter.ts
23622
- import { createHash as createHash9 } from "node:crypto";
23841
+ import { createHash as createHash10 } from "node:crypto";
23623
23842
  function extractNode7(node, containerQname, containerIsType, source, eof) {
23624
23843
  switch (node.type) {
23625
23844
  case "method_declaration":
@@ -23821,7 +24040,7 @@ function sigAndHash6(node, body2, source) {
23821
24040
  const sig = source.slice(node.startIndex, body2.startIndex).replace(/\s+/g, " ").trim();
23822
24041
  if (sig) out2.signature = sig;
23823
24042
  const bodyText = source.slice(body2.startIndex, body2.endIndex);
23824
- out2.bodyHash = createHash9("sha256").update(bodyText).digest("hex").slice(0, 16);
24043
+ out2.bodyHash = createHash10("sha256").update(bodyText).digest("hex").slice(0, 16);
23825
24044
  out2.bodySimhash = toHex(simhash(bodyText));
23826
24045
  return out2;
23827
24046
  }
@@ -23978,6 +24197,7 @@ var init_csharp_treesitter = __esm({
23978
24197
  // ../../packages/indexer/src/index.ts
23979
24198
  var src_exports = {};
23980
24199
  __export(src_exports, {
24200
+ DEFAULT_IGNORES: () => DEFAULT_IGNORES,
23981
24201
  DRIFT_FORK_RATIO: () => DRIFT_FORK_RATIO,
23982
24202
  TreeSitterCSharpProvider: () => TreeSitterCSharpProvider,
23983
24203
  TreeSitterCppProvider: () => TreeSitterCppProvider,
@@ -23994,6 +24214,7 @@ __export(src_exports, {
23994
24214
  findInnermostScope: () => findInnermostScope,
23995
24215
  folderNodeId: () => folderNodeId,
23996
24216
  fromHex: () => fromHex,
24217
+ gitListRelPaths: () => gitListRelPaths,
23997
24218
  hammingDistance: () => hammingDistance,
23998
24219
  hasForkedDrift: () => hasForkedDrift,
23999
24220
  incrementalReindex: () => incrementalReindex,
@@ -24006,7 +24227,7 @@ __export(src_exports, {
24006
24227
  simhashFeatures: () => simhashFeatures,
24007
24228
  symbolNodeId: () => symbolNodeId,
24008
24229
  toHex: () => toHex,
24009
- tokenize: () => tokenize
24230
+ tokenize: () => tokenize2
24010
24231
  });
24011
24232
  function defaultProviders() {
24012
24233
  if (providersCache) return providersCache;
@@ -24059,9 +24280,32 @@ var LOCAL_RULE_OVERRIDES = {
24059
24280
  to: [...CODE_NODE_LABELS, "Symbol"]
24060
24281
  },
24061
24282
  REVEALED_BY: null,
24062
- PRODUCED: null
24283
+ PRODUCED: null,
24284
+ // FIXED_BY locally ALSO carries the fix-provenance sense: `resolveProblem`
24285
+ // attributes a closed Problem to the fixing `Episode` (PLAN_PLASTICITY §2.1)
24286
+ // alongside the cloud's Problem→Solution knowledge claim. Same shape as
24287
+ // PRODUCED/REVEALED_BY above — an Episode is code-layer and never drains, so
24288
+ // the cloud door's `to: [Solution]` rule is untouched. The `from` constraint
24289
+ // stays: the reversed (Solution)-FIXED_BY->(...) splash bug is the reason
24290
+ // this rule exists at all.
24291
+ FIXED_BY: { from: EDGE_RULES["FIXED_BY"]?.from, to: ["Solution", "Episode"] }
24063
24292
  };
24064
- var SCHEMA_VERSION = 5;
24293
+ function localEdgeViolation(fromLabel, type, toLabel) {
24294
+ if (type in LOCAL_RULE_OVERRIDES) {
24295
+ const rule = LOCAL_RULE_OVERRIDES[type];
24296
+ if (!rule) return null;
24297
+ if (fromLabel && rule.from && !rule.from.includes(fromLabel)) {
24298
+ return `${type} cannot originate from ${fromLabel} locally (allowed: ${rule.from.join(", ")})`;
24299
+ }
24300
+ if (toLabel && rule.to && !rule.to.includes(toLabel)) {
24301
+ return `${type} cannot target ${toLabel} locally (allowed: ${rule.to.join(", ")})`;
24302
+ }
24303
+ return null;
24304
+ }
24305
+ const verdict = isValidEdge(fromLabel, type, toLabel);
24306
+ return verdict.ok ? null : verdict.reason ?? "edge rule violation";
24307
+ }
24308
+ var SCHEMA_VERSION = 6;
24065
24309
  var SCHEMA_SQL = `
24066
24310
  CREATE TABLE IF NOT EXISTS schema_version (
24067
24311
  version INTEGER PRIMARY KEY
@@ -24076,6 +24320,21 @@ CREATE TABLE IF NOT EXISTS store_meta (
24076
24320
  value TEXT NOT NULL
24077
24321
  );
24078
24322
 
24323
+ -- Durable ledger of edges the ontology gate REFUSED, keyed by edge type.
24324
+ -- Durable rather than in-memory for one specific reason: the status command runs
24325
+ -- in a SEPARATE process and opens its own store handle, so a counter living on
24326
+ -- the instance reads 0 there forever. That is exactly how a producer rejecting
24327
+ -- 100% of its output stayed invisible for 17 days. Persisting it also survives
24328
+ -- the daemon restart that would otherwise erase the evidence.
24329
+ -- Keyed by type because a systematic producer bug shows up as ONE type
24330
+ -- dominating; sample keeps the latest reason so the count is actionable.
24331
+ CREATE TABLE IF NOT EXISTS edge_rejections (
24332
+ type TEXT PRIMARY KEY,
24333
+ count INTEGER NOT NULL DEFAULT 0,
24334
+ last_at INTEGER NOT NULL,
24335
+ sample TEXT
24336
+ );
24337
+
24079
24338
  CREATE TABLE IF NOT EXISTS nodes (
24080
24339
  id TEXT PRIMARY KEY,
24081
24340
  label TEXT NOT NULL,
@@ -24452,6 +24711,16 @@ var SqliteGraphStore = class {
24452
24711
  if (!cols.has(name2)) this.db.exec(ddl);
24453
24712
  }
24454
24713
  }
24714
+ if (from < 6) {
24715
+ this.db.exec(`
24716
+ CREATE TABLE IF NOT EXISTS edge_rejections (
24717
+ type TEXT PRIMARY KEY,
24718
+ count INTEGER NOT NULL DEFAULT 0,
24719
+ last_at INTEGER NOT NULL,
24720
+ sample TEXT
24721
+ )
24722
+ `);
24723
+ }
24455
24724
  this.db.prepare("UPDATE schema_version SET version = ?").run(SCHEMA_VERSION);
24456
24725
  });
24457
24726
  }
@@ -24533,6 +24802,7 @@ var SqliteGraphStore = class {
24533
24802
  const violation = this.edgeRuleViolation(edge);
24534
24803
  if (violation) {
24535
24804
  this.rejectedEdgeCount++;
24805
+ this.recordEdgeRejection(edge.type, violation, edge.lastSeenAt || edge.createdAt || 0);
24536
24806
  console.warn(`[local-graph] rejected edge ${edge.from}-[:${edge.type}]->${edge.to}: ${violation}`);
24537
24807
  return;
24538
24808
  }
@@ -24557,22 +24827,51 @@ var SqliteGraphStore = class {
24557
24827
  * overlay consulted first. Returns the reason string on a documented-
24558
24828
  * forbidden combination, else null. Point lookups on the id PK — negligible
24559
24829
  * next to the insert itself. */
24560
- edgeRuleViolation(edge) {
24561
- const fromLabel = this.getNode(edge.from)?.label;
24562
- const toLabel = this.getNode(edge.to)?.label;
24563
- if (edge.type in LOCAL_RULE_OVERRIDES) {
24564
- const rule = LOCAL_RULE_OVERRIDES[edge.type];
24565
- if (!rule) return null;
24566
- if (fromLabel && rule.from && !rule.from.includes(fromLabel)) {
24567
- return `${edge.type} cannot originate from ${fromLabel} locally (allowed: ${rule.from.join(", ")})`;
24568
- }
24569
- if (toLabel && rule.to && !rule.to.includes(toLabel)) {
24570
- return `${edge.type} cannot target ${toLabel} locally (allowed: ${rule.to.join(", ")})`;
24571
- }
24572
- return null;
24830
+ /** Upsert one refusal into the durable ledger. Best-effort: a bookkeeping
24831
+ * failure must never turn a refused edge into a thrown write. */
24832
+ recordEdgeRejection(type, reason, at) {
24833
+ try {
24834
+ this.db.prepare(
24835
+ `INSERT INTO edge_rejections (type, count, last_at, sample) VALUES (?, 1, ?, ?)
24836
+ ON CONFLICT(type) DO UPDATE SET
24837
+ count = count + 1, last_at = excluded.last_at, sample = excluded.sample`
24838
+ ).run(type, at, reason.slice(0, 200));
24839
+ } catch {
24840
+ }
24841
+ }
24842
+ /** Refusals recorded by the ontology gate, per edge type, newest activity first.
24843
+ * Durable across restarts and readable from any process (see the table note). */
24844
+ edgeRejections() {
24845
+ try {
24846
+ return this.db.prepare(
24847
+ "SELECT type, count, last_at AS lastAt, sample FROM edge_rejections ORDER BY count DESC, last_at DESC"
24848
+ ).all();
24849
+ } catch {
24850
+ return [];
24851
+ }
24852
+ }
24853
+ /** Drop ledger entries whose last refusal predates `cutoff`. A still-misbehaving
24854
+ * producer keeps refreshing `last_at` and survives; a fixed one fades out. */
24855
+ pruneEdgeRejections(cutoff) {
24856
+ try {
24857
+ this.db.prepare("DELETE FROM edge_rejections WHERE last_at < ?").run(cutoff);
24858
+ } catch {
24859
+ }
24860
+ }
24861
+ /** Clear the ledger outright, whole or per type — operator escape hatch. */
24862
+ clearEdgeRejections(type) {
24863
+ try {
24864
+ if (type) this.db.prepare("DELETE FROM edge_rejections WHERE type = ?").run(type);
24865
+ else this.db.exec("DELETE FROM edge_rejections");
24866
+ } catch {
24573
24867
  }
24574
- const verdict = isValidEdge(fromLabel, edge.type, toLabel);
24575
- return verdict.ok ? null : verdict.reason ?? "edge rule violation";
24868
+ }
24869
+ edgeRuleViolation(edge) {
24870
+ return localEdgeViolation(
24871
+ this.getNode(edge.from)?.label,
24872
+ edge.type,
24873
+ this.getNode(edge.to)?.label
24874
+ );
24576
24875
  }
24577
24876
  updateEdge(id, patch) {
24578
24877
  this.stmts.updateEdge.run({
@@ -24709,6 +25008,163 @@ var SqliteGraphStore = class {
24709
25008
  const rows = this.db.prepare("SELECT from_id, to_id, type FROM edges WHERE valid_to IS NULL").all();
24710
25009
  return rows.map((r) => ({ from: r.from_id, to: r.to_id, type: r.type }));
24711
25010
  }
25011
+ getMeta(key) {
25012
+ const r = this.db.prepare("SELECT value FROM store_meta WHERE key = ?").get(key);
25013
+ return r?.value ?? null;
25014
+ }
25015
+ setMeta(key, value) {
25016
+ this.db.prepare(
25017
+ "INSERT INTO store_meta (key, value) VALUES (:key, :value) ON CONFLICT(key) DO UPDATE SET value = excluded.value"
25018
+ ).run({ key, value });
25019
+ }
25020
+ dirtyNodeIdsSince(ts) {
25021
+ const rows = this.db.prepare("SELECT id FROM nodes WHERE valid_to IS NULL AND last_updated_at > ?").all(ts);
25022
+ return rows.map((r) => r.id);
25023
+ }
25024
+ /** Endpoints of edges TOUCHED since `ts` — created, re-seen, or CLOSED.
25025
+ * Closures matter as much as additions: a node that lost inflow is rank-dirty
25026
+ * while its own row never updated, so removal endpoints must seed the
25027
+ * incremental region or the stale inflow persists until the full backstop. */
25028
+ edgeEndpointsTouchedSince(ts) {
25029
+ const rows = this.db.prepare(
25030
+ `SELECT from_id, to_id FROM edges
25031
+ WHERE (valid_to IS NULL AND (created_at > :ts OR last_seen_at > :ts))
25032
+ OR (valid_to IS NOT NULL AND valid_to > :ts)`
25033
+ ).all({ ts });
25034
+ return rows.map((r) => ({ from: r.from_id, to: r.to_id }));
25035
+ }
25036
+ /** Lightweight out-edges for a SET of sources, chunked IN-lists — the region
25037
+ * assembly path for incremental PageRank (per-node outEdges() at region
25038
+ * scale re-creates the 106k-prepared-calls problem the batch scan solved). */
25039
+ outEdgesForMany(ids) {
25040
+ return this.edgesForMany(ids, "from_id");
25041
+ }
25042
+ inEdgesForMany(ids) {
25043
+ return this.edgesForMany(ids, "to_id");
25044
+ }
25045
+ /** Stored pageRank for a SET of ids (live rows only — a closed id is simply
25046
+ * absent, which is how incremental region assembly drops dead endpoints). */
25047
+ ranksForMany(ids) {
25048
+ const out2 = /* @__PURE__ */ new Map();
25049
+ const CHUNK = 400;
25050
+ for (let i2 = 0; i2 < ids.length; i2 += CHUNK) {
25051
+ const chunk = ids.slice(i2, i2 + CHUNK);
25052
+ const placeholders = chunk.map(() => "?").join(", ");
25053
+ const rows = this.db.prepare(
25054
+ `SELECT id, page_rank FROM nodes WHERE id IN (${placeholders}) AND valid_to IS NULL`
25055
+ ).all(...chunk);
25056
+ for (const r of rows) out2.set(r.id, r.page_rank);
25057
+ }
25058
+ return out2;
25059
+ }
25060
+ /** The minimal row set the landmark sweep needs — landmark CANDIDATES
25061
+ * (Pattern/RootCause), everything currently flagged, and every
25062
+ * persistent-tier node (force-landmarks). A few thousand rows, so the
25063
+ * incremental path can refresh the GLOBAL landmark set without the 179k-row
25064
+ * scanLiveNodes materialization. */
25065
+ landmarkSweepRows() {
25066
+ const rows = this.db.prepare(
25067
+ `SELECT id, label, page_rank, is_landmark, memory_tier, extraction_source FROM nodes
25068
+ WHERE valid_to IS NULL
25069
+ AND (memory_tier = 'persistent' OR is_landmark = 1 OR label IN ('Pattern', 'RootCause'))`
25070
+ ).all();
25071
+ return rows.map((r) => ({
25072
+ id: r.id,
25073
+ label: r.label,
25074
+ pageRank: r.page_rank,
25075
+ isLandmark: r.is_landmark === 1,
25076
+ memoryTier: r.memory_tier,
25077
+ extractionSource: r.extraction_source
25078
+ }));
25079
+ }
25080
+ edgesForMany(ids, col) {
25081
+ const out2 = [];
25082
+ const CHUNK = 400;
25083
+ for (let i2 = 0; i2 < ids.length; i2 += CHUNK) {
25084
+ const chunk = ids.slice(i2, i2 + CHUNK);
25085
+ const placeholders = chunk.map(() => "?").join(", ");
25086
+ const rows = this.db.prepare(
25087
+ `SELECT from_id, to_id, type FROM edges WHERE ${col} IN (${placeholders}) AND valid_to IS NULL`
25088
+ ).all(...chunk);
25089
+ for (const r of rows) out2.push({ from: r.from_id, to: r.to_id, type: r.type });
25090
+ }
25091
+ return out2;
25092
+ }
25093
+ checkpointWal() {
25094
+ try {
25095
+ const r = this.db.prepare("PRAGMA wal_checkpoint(TRUNCATE)").get();
25096
+ return r ?? null;
25097
+ } catch {
25098
+ return null;
25099
+ }
25100
+ }
25101
+ reviveReobserved(relPaths, workspaceId, since) {
25102
+ let revived = 0;
25103
+ const CHUNK = 400;
25104
+ for (let i2 = 0; i2 < relPaths.length; i2 += CHUNK) {
25105
+ const slice = relPaths.slice(i2, i2 + CHUNK);
25106
+ if (slice.length === 0) continue;
25107
+ const r = this.db.prepare(
25108
+ `UPDATE nodes SET valid_to = NULL
25109
+ WHERE valid_to IS NOT NULL
25110
+ AND last_updated_at >= ?
25111
+ AND json_extract(attrs_json, '$.workspaceId') = ?
25112
+ AND json_extract(attrs_json, '$.relPath') IN (${slice.map(() => "?").join(",")})`
25113
+ ).run(since, workspaceId, ...slice);
25114
+ revived += Number(r.changes);
25115
+ }
25116
+ if (revived > 0) this.mutations++;
25117
+ return revived;
25118
+ }
25119
+ recentEdgeAttrCoverage(marker, attr, limit) {
25120
+ const r = this.db.prepare(
25121
+ `SELECT COUNT(*) AS total,
25122
+ COALESCE(SUM(CASE WHEN json_extract(attrs_json, '$.' || ?) = 1 THEN 1 ELSE 0 END), 0) AS count
25123
+ FROM (SELECT attrs_json FROM edges
25124
+ WHERE valid_to IS NULL AND attrs_json LIKE ?
25125
+ ORDER BY created_at DESC LIMIT ?)`
25126
+ ).get(attr, `%${marker}%`, limit);
25127
+ return { count: Number(r.count), total: Number(r.total) };
25128
+ }
25129
+ liveNodeIds(ids) {
25130
+ const live = /* @__PURE__ */ new Set();
25131
+ const CHUNK = 900;
25132
+ for (let i2 = 0; i2 < ids.length; i2 += CHUNK) {
25133
+ const slice = ids.slice(i2, i2 + CHUNK);
25134
+ if (slice.length === 0) continue;
25135
+ const rows = this.db.prepare(
25136
+ `SELECT id FROM nodes WHERE valid_to IS NULL AND id IN (${slice.map(() => "?").join(",")})`
25137
+ ).all(...slice);
25138
+ for (const r of rows) live.add(r.id);
25139
+ }
25140
+ return live;
25141
+ }
25142
+ /**
25143
+ * Live edges WITH their endpoint labels and ids, resolved in ONE join.
25144
+ *
25145
+ * The ontology sweep needs (id, type, fromLabel, toLabel) for every live edge.
25146
+ * Doing that as `scanLiveEdges()` + two `getNode()` calls is 2N node reads —
25147
+ * 550,000 on this store — and each one deserializes the node's embedding blob.
25148
+ * Measured: the sweep did not finish in 10 minutes. As a single join it is one
25149
+ * query over an index-covered scan. Labels only; nothing here touches embeddings.
25150
+ */
25151
+ scanLiveEdgeRows() {
25152
+ const rows = this.db.prepare(
25153
+ `SELECT e.id, e.from_id, e.to_id, e.type, a.label AS from_label, b.label AS to_label
25154
+ FROM edges e
25155
+ LEFT JOIN nodes a ON a.id = e.from_id AND a.valid_to IS NULL
25156
+ LEFT JOIN nodes b ON b.id = e.to_id AND b.valid_to IS NULL
25157
+ WHERE e.valid_to IS NULL`
25158
+ ).all();
25159
+ return rows.map((r) => ({
25160
+ id: r.id,
25161
+ from: r.from_id,
25162
+ to: r.to_id,
25163
+ type: r.type,
25164
+ fromLabel: r.from_label ?? void 0,
25165
+ toLabel: r.to_label ?? void 0
25166
+ }));
25167
+ }
24712
25168
  /** Live nodes whose attrs.relPath is one of `relPaths`. Uses the nodes_relpath
24713
25169
  * expression index so the incremental reindex fetches only the changed files'
24714
25170
  * symbols instead of scanning every versioned node. */
@@ -24729,6 +25185,10 @@ var SqliteGraphStore = class {
24729
25185
  if (!live) return null;
24730
25186
  const version2 = live.version ?? 1;
24731
25187
  const frozenId = `${liveId}@v${version2}`;
25188
+ if (this.getNode(frozenId)) {
25189
+ this.stmts.advanceLive.run({ live_id: liveId, t });
25190
+ return frozenId;
25191
+ }
24732
25192
  this.stmts.freezeCopy.run({ frozen_id: frozenId, live_id: liveId, t });
24733
25193
  this.mergeEdge({
24734
25194
  id: `edge_superseded_${frozenId}`,
@@ -24787,6 +25247,7 @@ var CAUSAL_FAMILY = [
24787
25247
 
24788
25248
  // ../../packages/local-graph/src/justification.ts
24789
25249
  init_src();
25250
+ init_src2();
24790
25251
  function addDependency(store2, opts) {
24791
25252
  const id = digest({ from: opts.fromId, type: "DEPENDS_ON", to: opts.toId });
24792
25253
  const attrs = { relation: opts.relation };
@@ -24809,13 +25270,72 @@ function addDependency(store2, opts) {
24809
25270
  store2.mergeEdge(edge);
24810
25271
  return edge;
24811
25272
  }
24812
- function markRevisit(store2, node, reason, ts) {
25273
+ function markRevisit(store2, node, reason, ts, answeredWhen) {
24813
25274
  const fresh = store2.getNode(node.id) ?? node;
24814
25275
  store2.updateNode(node.id, {
24815
- attrs: { ...fresh.attrs, revisit: true, revisitReason: reason, revisitSinceTs: ts },
25276
+ attrs: {
25277
+ ...fresh.attrs,
25278
+ revisit: true,
25279
+ revisitReason: reason,
25280
+ revisitSinceTs: ts,
25281
+ revisitAnsweredWhen: answeredWhen
25282
+ },
24816
25283
  lastUpdatedAt: ts
24817
25284
  });
24818
25285
  }
25286
+ var LEGACY_AUTO_CLOSE_ASK = "auto-closed off a pre-provenance anchor";
25287
+ var KNOWN_CONDITIONS = {
25288
+ parentProblemOpen: true,
25289
+ dependentStale: true
25290
+ };
25291
+ function isRevisitCondition(v) {
25292
+ return typeof v === "string" && Object.prototype.hasOwnProperty.call(KNOWN_CONDITIONS, v);
25293
+ }
25294
+ function conditionOf(node) {
25295
+ const explicit = node.attrs["revisitAnsweredWhen"];
25296
+ if (isRevisitCondition(explicit)) return explicit;
25297
+ if (String(node.attrs["revisitReason"] ?? "").startsWith(LEGACY_AUTO_CLOSE_ASK)) {
25298
+ return "parentProblemOpen";
25299
+ }
25300
+ return void 0;
25301
+ }
25302
+ function clearAnsweredRevisits(store2, ts) {
25303
+ const report = { cleared: 0, standing: 0 };
25304
+ for (const label of SEMANTIC_NODE_LABELS) {
25305
+ for (const node of store2.findNodesByLabel(label)) {
25306
+ if (node.attrs["revisit"] !== true) continue;
25307
+ const condition = conditionOf(node);
25308
+ if (condition === void 0 || !isRevisitAnswered(store2, node, condition)) {
25309
+ report.standing++;
25310
+ continue;
25311
+ }
25312
+ clearRevisit(store2, node.id, ts);
25313
+ report.cleared++;
25314
+ }
25315
+ }
25316
+ return report;
25317
+ }
25318
+ function isRevisitAnswered(store2, node, condition) {
25319
+ switch (condition) {
25320
+ case "parentProblemOpen": {
25321
+ const parents = store2.inEdges(node.id, ["SOLVED_BY"]).map((e) => store2.getNode(e.from)).filter((n) => n !== null && n.validTo == null);
25322
+ return parents.every((p) => p.attrs["resolvedAt"] == null);
25323
+ }
25324
+ case "dependentStale": {
25325
+ const since = Number(node.attrs["revisitSinceTs"] ?? 0);
25326
+ return since > 0 && node.lastUpdatedAt > since;
25327
+ }
25328
+ }
25329
+ }
25330
+ function clearRevisit(store2, nodeId, ts) {
25331
+ const n = store2.getNode(nodeId);
25332
+ if (!n) return;
25333
+ const attrs = { ...n.attrs };
25334
+ delete attrs["revisit"];
25335
+ delete attrs["revisitReason"];
25336
+ delete attrs["revisitSinceTs"];
25337
+ store2.updateNode(nodeId, { attrs, lastUpdatedAt: ts });
25338
+ }
24819
25339
  function listNeedsRevisit(store2, asOf) {
24820
25340
  return store2.nodesAsOf(asOf).filter((n) => n.attrs["revisit"] === true).map((n) => ({
24821
25341
  id: n.id,
@@ -24948,7 +25468,6 @@ function markBoth(store2, a, b, patch, ts) {
24948
25468
  // ../../packages/local-graph/src/design-problem.ts
24949
25469
  init_src();
24950
25470
  init_src();
24951
- init_src2();
24952
25471
 
24953
25472
  // ../../packages/local-graph/src/problem-package-link.ts
24954
25473
  init_src();
@@ -25134,50 +25653,113 @@ function backfillProblemContext(store2, ts) {
25134
25653
  }
25135
25654
 
25136
25655
  // ../../packages/local-graph/src/design-problem.ts
25137
- function buildNode(id, label, description, ts, attrs) {
25138
- return {
25139
- id,
25140
- label,
25141
- description,
25142
- extractionConfidence: 0.4,
25143
- // provisional: below the error-path's 0.6+
25144
- extractionSource: "agent-observed",
25145
- embedding: [],
25146
- cumulativeSurprise: 0,
25147
- peakSurprise: 0,
25148
- cumulativeHits: 1,
25149
- lastUpdatedAt: ts,
25150
- createdAt: ts,
25151
- memoryTier: "short-term",
25152
- pageRank: 0,
25153
- isLandmark: false,
25154
- community: null,
25155
- stability: "unstable",
25156
- attrs
25157
- };
25656
+ init_src2();
25657
+
25658
+ // ../../packages/local-graph/src/problem-dedup.ts
25659
+ init_src();
25660
+ init_src();
25661
+ var REDIRECT_EDGES = [
25662
+ "CAUSED_BY",
25663
+ "SOLVED_BY",
25664
+ "FIXED_BY",
25665
+ "ANCHORED_AT",
25666
+ "MANIFESTED_IN",
25667
+ "EVIDENCED_BY"
25668
+ ];
25669
+ function corroborations(n) {
25670
+ return Number(n.attrs["corroborations"] ?? 0);
25158
25671
  }
25159
- function mergeEdge(store2, from, to, type, ts) {
25160
- store2.mergeEdge({
25161
- id: `edge_${digest({ from, type, to })}`.slice(0, 24),
25162
- from,
25163
- to,
25164
- type,
25165
- confidence: 0.4,
25166
- extractionSource: "agent-observed",
25167
- createdAt: ts,
25168
- lastSeenAt: ts,
25169
- navSuccesses: 0,
25170
- navFailures: 0,
25171
- attrs: { provisional: true }
25672
+ function overlap(a, b) {
25673
+ if (a.size === 0 || b.size === 0) return 0;
25674
+ let inter = 0;
25675
+ for (const x of a) if (b.has(x)) inter++;
25676
+ return inter / Math.min(a.size, b.size);
25677
+ }
25678
+ function mergeDuplicateProblems(store2, opts) {
25679
+ const minOverlap = opts.minOverlap ?? 0.85;
25680
+ const minTokens = opts.minTokens ?? 4;
25681
+ const report = { clusters: 0, merged: 0 };
25682
+ const open = store2.findNodesByLabel("Problem").filter((p) => p.attrs["resolvedAt"] == null && p.attrs["mergedInto"] === void 0);
25683
+ const tokens = /* @__PURE__ */ new Map();
25684
+ for (const p of open) tokens.set(p.id, new Set(retrievalTokens(p.description)));
25685
+ const consumed = /* @__PURE__ */ new Set();
25686
+ store2.transaction(() => {
25687
+ for (let i2 = 0; i2 < open.length; i2++) {
25688
+ const a = open[i2];
25689
+ if (consumed.has(a.id)) continue;
25690
+ const cluster = [a];
25691
+ const ta = tokens.get(a.id);
25692
+ for (let j = i2 + 1; j < open.length; j++) {
25693
+ const b = open[j];
25694
+ if (consumed.has(b.id)) continue;
25695
+ const tb = tokens.get(b.id);
25696
+ if (Math.min(ta.size, tb.size) < minTokens) continue;
25697
+ if (isConstraintProblem(a) !== isConstraintProblem(b)) continue;
25698
+ if (overlap(ta, tb) >= minOverlap) {
25699
+ cluster.push(b);
25700
+ consumed.add(b.id);
25701
+ }
25702
+ }
25703
+ if (cluster.length < 2) continue;
25704
+ report.clusters++;
25705
+ cluster.sort((x, y) => corroborations(y) - corroborations(x) || x.createdAt - y.createdAt);
25706
+ const survivor = cluster[0];
25707
+ for (const dup of cluster.slice(1)) {
25708
+ foldDuplicateProblem(store2, dup, survivor, opts.ts);
25709
+ report.merged++;
25710
+ }
25711
+ }
25172
25712
  });
25713
+ return report;
25173
25714
  }
25174
- var CITABLE_PRIOR_LABELS = /* @__PURE__ */ new Set([
25175
- "Solution",
25176
- "RootCause",
25177
- "Pattern",
25178
- "Technique",
25715
+ function foldDuplicateProblem(store2, dup, survivor, ts) {
25716
+ const surv = store2.getNode(survivor.id);
25717
+ if (!surv) return;
25718
+ const sources = new Set(surv.attrs["sources"] ?? []);
25719
+ for (const s of dup.attrs["sources"] ?? []) sources.add(s);
25720
+ store2.updateNode(survivor.id, {
25721
+ attrs: {
25722
+ ...surv.attrs,
25723
+ sources: [...sources],
25724
+ corroborations: corroborations(surv) + corroborations(dup) + 1
25725
+ },
25726
+ cumulativeHits: (surv.cumulativeHits ?? 0) + (dup.cumulativeHits ?? 0),
25727
+ lastUpdatedAt: ts
25728
+ });
25729
+ for (const e of store2.outEdges(dup.id, REDIRECT_EDGES)) {
25730
+ if (e.to === survivor.id) continue;
25731
+ const id = `edge_${digest({ from: survivor.id, type: e.type, to: e.to })}`.slice(0, 24);
25732
+ if (store2.getEdge(id)) continue;
25733
+ const redirected = {
25734
+ ...e,
25735
+ id,
25736
+ from: survivor.id,
25737
+ createdAt: ts,
25738
+ lastSeenAt: ts
25739
+ };
25740
+ store2.mergeEdge(redirected);
25741
+ }
25742
+ store2.updateNode(dup.id, {
25743
+ attrs: { ...dup.attrs, mergedInto: survivor.id, resolvedAs: "duplicate", resolvedAt: ts },
25744
+ lastUpdatedAt: ts
25745
+ });
25746
+ store2.closeNode(dup.id, ts);
25747
+ }
25748
+
25749
+ // ../../packages/local-graph/src/design-problem.ts
25750
+ function isConstraintProblem(node) {
25751
+ return node.attrs["kind"] === "constraint";
25752
+ }
25753
+ var CITABLE_PRIOR_LABELS = /* @__PURE__ */ new Set([
25754
+ "Solution",
25755
+ "RootCause",
25756
+ "Pattern",
25757
+ "Technique",
25179
25758
  "AntiPattern"
25180
25759
  ]);
25760
+ function isAutoMinted(n) {
25761
+ return n.label === "Solution" && String(n.description ?? "").startsWith(AUTO_MINT_PREFIX);
25762
+ }
25181
25763
  function priorsForFile(store2, relPath) {
25182
25764
  const want = relPath.trim().replace(/^\.?\//, "");
25183
25765
  let file2 = null;
@@ -25189,35 +25771,53 @@ function priorsForFile(store2, relPath) {
25189
25771
  }
25190
25772
  if (!file2) return null;
25191
25773
  const openProblems = [];
25774
+ const constraints = [];
25775
+ const resolvedProblems = [];
25192
25776
  const seenProblem = /* @__PURE__ */ new Set();
25193
25777
  const related = /* @__PURE__ */ new Map();
25194
25778
  for (const e of store2.inEdges(file2.id, ["ANCHORED_AT"])) {
25195
25779
  const n = store2.getNode(e.from);
25196
25780
  if (!n) continue;
25197
25781
  if (n.label === "Problem") {
25198
- if (!n.attrs["resolvedAt"] && !seenProblem.has(n.id)) {
25199
- seenProblem.add(n.id);
25200
- openProblems.push(n);
25201
- }
25202
- } else if (CITABLE_PRIOR_LABELS.has(n.label)) {
25782
+ if (seenProblem.has(n.id)) continue;
25783
+ seenProblem.add(n.id);
25784
+ if (!n.attrs["resolvedAt"]) {
25785
+ (isConstraintProblem(n) ? constraints : openProblems).push(n);
25786
+ } else if (n.attrs["resolvedAs"] == null && n.attrs["mergedInto"] === void 0 && e.attrs?.["anchorProvenance"] !== "legacy") {
25787
+ resolvedProblems.push(n);
25788
+ }
25789
+ } else if (CITABLE_PRIOR_LABELS.has(n.label) && !isAutoMinted(n)) {
25203
25790
  related.set(n.id, n);
25204
25791
  }
25205
25792
  }
25206
25793
  const solutionsByProblem = /* @__PURE__ */ new Map();
25207
- for (const p of openProblems) {
25794
+ for (const p of [...openProblems, ...constraints, ...resolvedProblems]) {
25208
25795
  for (const e of store2.outEdges(p.id, ["SOLVED_BY", "CAUSED_BY", "INSTANCE_OF"])) {
25209
25796
  const n = store2.getNode(e.to);
25210
- if (n && CITABLE_PRIOR_LABELS.has(n.label)) related.set(n.id, n);
25211
- if (n && n.label === "Solution" && e.type === "SOLVED_BY") {
25797
+ if (n && CITABLE_PRIOR_LABELS.has(n.label) && !isAutoMinted(n)) related.set(n.id, n);
25798
+ if (n && n.label === "Solution" && e.type === "SOLVED_BY" && !isAutoMinted(n)) {
25212
25799
  const list = solutionsByProblem.get(p.id) ?? [];
25213
25800
  if (!list.some((s) => s.id === n.id)) list.push(n);
25214
25801
  solutionsByProblem.set(p.id, list);
25215
25802
  }
25216
25803
  }
25217
25804
  }
25218
- if (openProblems.length === 0 && related.size === 0) return null;
25219
- openProblems.sort((a, b) => (b.lastUpdatedAt ?? 0) - (a.lastUpdatedAt ?? 0));
25220
- return { file: file2, openProblems, related: [...related.values()], solutionsByProblem };
25805
+ if (openProblems.length === 0 && constraints.length === 0 && resolvedProblems.length === 0 && related.size === 0)
25806
+ return null;
25807
+ const recentFirst = (a, b) => (b.lastUpdatedAt ?? 0) - (a.lastUpdatedAt ?? 0);
25808
+ openProblems.sort(recentFirst);
25809
+ constraints.sort(recentFirst);
25810
+ resolvedProblems.sort(
25811
+ (a, b) => Number(b.attrs["resolvedAt"] ?? 0) - Number(a.attrs["resolvedAt"] ?? 0)
25812
+ );
25813
+ return {
25814
+ file: file2,
25815
+ openProblems,
25816
+ constraints,
25817
+ resolvedProblems,
25818
+ related: [...related.values()],
25819
+ solutionsByProblem
25820
+ };
25221
25821
  }
25222
25822
  function recordAnchorHint(store2, problemId, relPath, provenance, ts) {
25223
25823
  const p = store2.getNode(problemId);
@@ -25228,18 +25828,49 @@ function recordAnchorHint(store2, problemId, relPath, provenance, ts) {
25228
25828
  });
25229
25829
  return true;
25230
25830
  }
25231
- function resolveDesignProblems(store2, t) {
25831
+ function reopenAutoClosedProblems(store2, t) {
25832
+ const report = { reopened: 0, alreadySuspect: 0, agentDescribed: 0 };
25833
+ for (const p of store2.findNodesByLabel("Problem")) {
25834
+ if (p.attrs["resolvedAt"] == null) continue;
25835
+ if (p.attrs["resolvedAs"] != null) continue;
25836
+ if (p.attrs["mergedInto"] !== void 0) continue;
25837
+ if (p.attrs["resolutionWitnessed"] === true) {
25838
+ report.agentDescribed++;
25839
+ continue;
25840
+ }
25841
+ const sols = store2.outEdges(p.id, ["SOLVED_BY"]).map((e) => store2.getNode(e.to)).filter((n) => n !== null);
25842
+ if (sols.length === 0) continue;
25843
+ if (!sols.every((s) => String(s.description ?? "").startsWith(AUTO_MINT_PREFIX))) {
25844
+ report.agentDescribed++;
25845
+ continue;
25846
+ }
25847
+ if (p.attrs["resolutionSuspect"] === true) report.alreadySuspect++;
25848
+ const attrs = { ...p.attrs };
25849
+ delete attrs["resolvedAt"];
25850
+ attrs["reopenedFrom"] = "auto-close";
25851
+ attrs["reopenedAt"] = t;
25852
+ store2.updateNode(p.id, { attrs, lastUpdatedAt: t });
25853
+ report.reopened++;
25854
+ }
25855
+ return report;
25856
+ }
25857
+ var AUTO_MINT_PREFIX = "addressed by an edit to ";
25858
+ function markFixCandidates(store2, t) {
25232
25859
  let resolved = 0;
25233
25860
  for (const p of store2.findNodesByLabel("Problem")) {
25234
25861
  if (!p.id.startsWith("dprob_")) continue;
25235
25862
  if (p.attrs["resolvedAt"]) continue;
25863
+ if (isConstraintProblem(p)) continue;
25236
25864
  let symName = "";
25237
25865
  let symRelPath;
25238
25866
  let edited = false;
25867
+ const since = Math.max(p.createdAt, Number(p.attrs["fixCandidateClearedAt"] ?? 0));
25239
25868
  for (const e of store2.outEdges(p.id, ["ANCHORED_AT"])) {
25240
25869
  if (e.attrs?.["mention"] === true) continue;
25870
+ if (e.attrs?.["anchorProvenance"] === "legacy") continue;
25241
25871
  const sym = store2.getNode(e.to);
25242
- if (sym && sym.lastUpdatedAt > p.createdAt) {
25872
+ const changedAt = sym?.label === "File" ? Number(sym.attrs["contentChangedAt"] ?? 0) : sym?.lastUpdatedAt ?? 0;
25873
+ if (sym && changedAt > since) {
25243
25874
  edited = true;
25244
25875
  symName = sym.description;
25245
25876
  symRelPath = sym.attrs["relPath"] ?? void 0;
@@ -25247,36 +25878,172 @@ function resolveDesignProblems(store2, t) {
25247
25878
  }
25248
25879
  }
25249
25880
  if (!edited) continue;
25250
- if (store2.outEdges(p.id, ["SOLVED_BY"]).length === 0) {
25251
- const solId = `dfix_${digest({ problemId: p.id, edit: t })}`.slice(0, 56);
25252
- store2.mergeNode(
25253
- buildNode(solId, "Solution", `addressed by an edit to ${symName}`, t, {
25254
- source: "convo",
25255
- provisional: false,
25256
- // AC-resolution-attrs: the resolving symbol/file as STRUCTURED data, not
25257
- // just prose — the F2 join key downstream backfills and the viz read.
25258
- resolvedSymbols: [symName],
25259
- ...symRelPath ? { resolvedRelPath: symRelPath } : {}
25260
- })
25261
- );
25262
- mergeEdge(store2, p.id, solId, "SOLVED_BY", t);
25263
- for (const ae of store2.outEdges(p.id, ["ANCHORED_AT"]))
25264
- mergeEdge(store2, solId, ae.to, "ANCHORED_AT", t);
25265
- }
25881
+ if (p.attrs["fixCandidateAt"] !== void 0) continue;
25882
+ if (store2.outEdges(p.id, ["SOLVED_BY"]).some((e) => {
25883
+ const s = store2.getNode(e.to);
25884
+ return s !== null && !String(s.description ?? "").startsWith(AUTO_MINT_PREFIX);
25885
+ }))
25886
+ continue;
25266
25887
  store2.updateNode(p.id, {
25267
- attrs: { ...p.attrs, provisional: false, resolvedAt: t },
25888
+ attrs: {
25889
+ ...p.attrs,
25890
+ // The cue, kept as structured data so the render can name the file it is
25891
+ // asking about. Deliberately NOT `resolvedAt` — this is a question.
25892
+ fixCandidateAt: t,
25893
+ fixCandidateSymbol: symName,
25894
+ ...symRelPath ? { fixCandidateFile: symRelPath } : {},
25895
+ // Snapshot the render-ledger counter so "shown since THIS ask" is
25896
+ // measurable. `shownCount` is the node's LIFETIME count across every
25897
+ // band, so comparing it raw would retire a fresh ask on a
25898
+ // frequently-surfaced problem before anyone had seen the question once.
25899
+ fixCandidateShownBase: Number(p.attrs["shownCount"] ?? 0)
25900
+ },
25268
25901
  lastUpdatedAt: t
25269
25902
  });
25270
25903
  resolved++;
25271
25904
  }
25272
25905
  return resolved;
25273
25906
  }
25907
+ var FIX_CANDIDATE_ASK_LIMIT = 5;
25908
+ function clearSettledFixCandidates(store2, t) {
25909
+ const report = { answered: 0, ignored: 0, unsubstantiated: 0, standing: 0 };
25910
+ for (const p of store2.findNodesByLabel("Problem")) {
25911
+ if (p.attrs["fixCandidateAt"] === void 0) continue;
25912
+ const fileAnchors = store2.outEdges(p.id, ["ANCHORED_AT"]).filter((e) => e.attrs?.["mention"] !== true && e.attrs?.["anchorProvenance"] !== "legacy").map((e) => store2.getNode(e.to)).filter((n) => n !== null && n.label === "File");
25913
+ const unsubstantiated = fileAnchors.length > 0 && fileAnchors.every((f) => f.attrs["contentChangedAt"] === void 0);
25914
+ const answered = p.attrs["resolvedAt"] != null || store2.outEdges(p.id, ["SOLVED_BY"]).some((e) => {
25915
+ const s = store2.getNode(e.to);
25916
+ return s !== null && !String(s.description ?? "").startsWith(AUTO_MINT_PREFIX);
25917
+ });
25918
+ const base = Number(
25919
+ p.attrs["fixCandidateShownBase"] ?? p.attrs["shownCount"] ?? 0
25920
+ );
25921
+ const shownSinceAsk = Number(p.attrs["shownCount"] ?? 0) - base;
25922
+ const ignored = shownSinceAsk >= FIX_CANDIDATE_ASK_LIMIT;
25923
+ if (!answered && !ignored && !unsubstantiated) {
25924
+ report.standing++;
25925
+ continue;
25926
+ }
25927
+ const attrs = { ...p.attrs };
25928
+ delete attrs["fixCandidateAt"];
25929
+ delete attrs["fixCandidateSymbol"];
25930
+ delete attrs["fixCandidateFile"];
25931
+ attrs["fixCandidateClearedAt"] = t;
25932
+ store2.updateNode(p.id, { attrs, lastUpdatedAt: t });
25933
+ if (answered) report.answered++;
25934
+ else if (ignored) report.ignored++;
25935
+ else report.unsubstantiated++;
25936
+ }
25937
+ return report;
25938
+ }
25939
+
25940
+ // ../../packages/local-graph/src/intent.ts
25941
+ init_src();
25274
25942
 
25275
25943
  // ../../packages/local-graph/src/anchor-backfill.ts
25276
- var AUTO_MINT_PREFIX = "addressed by an edit to ";
25944
+ init_src();
25945
+ init_src2();
25277
25946
  function isLegacyAnchor(attrs) {
25278
25947
  return attrs?.["captureTime"] === true && attrs["anchorProvenance"] === void 0;
25279
25948
  }
25949
+ var STATEMENT_PATH_RE = new RegExp(
25950
+ String.raw`(?:[\w.+-]+\/)+[\w.+-]+\.(?:${anchorableExtensionAlternation()})`,
25951
+ "g"
25952
+ );
25953
+ function repairLegacyAnchorsFromStatement(store2, ts) {
25954
+ const report = {
25955
+ repaired: [],
25956
+ retiredGuesses: 0,
25957
+ noPathNamed: 0,
25958
+ pathUnknown: 0,
25959
+ alreadyCorrect: 0
25960
+ };
25961
+ const byPath = /* @__PURE__ */ new Map();
25962
+ for (const f of store2.findNodesByLabel("File")) {
25963
+ const path = String(f.attrs["relPath"] ?? f.description ?? "");
25964
+ if (path) byPath.set(path, { id: f.id, path });
25965
+ }
25966
+ const resolvePath = (named) => {
25967
+ const exact = byPath.get(named);
25968
+ if (exact) return exact;
25969
+ const hits = [...byPath.values()].filter(
25970
+ (f) => f.path.endsWith(`/${named}`) || named.endsWith(`/${f.path}`)
25971
+ );
25972
+ return hits.length === 1 ? hits[0] : null;
25973
+ };
25974
+ for (const p of store2.findNodesByLabel("Problem")) {
25975
+ try {
25976
+ const anchors = store2.outEdges(p.id, ["ANCHORED_AT"]);
25977
+ const legacy = anchors.filter((e) => e.attrs?.["anchorProvenance"] === "legacy");
25978
+ if (legacy.length === 0) continue;
25979
+ const better = anchors.filter((e) => {
25980
+ const prov = e.attrs?.["anchorProvenance"];
25981
+ return prov === "restated" || prov === "witnessed" || prov === "edited";
25982
+ });
25983
+ if (better.length > 0) {
25984
+ const betterTargets = new Set(better.map((e) => e.to));
25985
+ let retired = 0;
25986
+ for (const e of legacy) {
25987
+ if (!betterTargets.has(e.to)) {
25988
+ store2.closeEdge(e.id, ts);
25989
+ retired++;
25990
+ }
25991
+ }
25992
+ report.retiredGuesses += retired;
25993
+ continue;
25994
+ }
25995
+ const named = [...String(p.description ?? "").matchAll(STATEMENT_PATH_RE)].map((m) => m[0]);
25996
+ if (named.length === 0) {
25997
+ report.noPathNamed++;
25998
+ continue;
25999
+ }
26000
+ const guessedPaths = legacy.map((e) => {
26001
+ const f = store2.getNode(e.to);
26002
+ return String(f?.attrs["relPath"] ?? f?.description ?? "");
26003
+ });
26004
+ if (named.some((x) => guessedPaths.some((g) => g.endsWith(x) || x.endsWith(g)))) {
26005
+ report.alreadyCorrect++;
26006
+ continue;
26007
+ }
26008
+ const target = named.map(resolvePath).find((f) => f !== null);
26009
+ if (!target) {
26010
+ report.pathUnknown++;
26011
+ continue;
26012
+ }
26013
+ store2.mergeEdge({
26014
+ id: `edge_${digest({ from: p.id, type: "ANCHORED_AT", to: target.id })}`.slice(0, 24),
26015
+ from: p.id,
26016
+ to: target.id,
26017
+ type: "ANCHORED_AT",
26018
+ // Same confidence a capture-time anchor enters at: the source is the
26019
+ // agent's own statement either way, only the moment of reading differs.
26020
+ confidence: 0.4,
26021
+ extractionSource: "agent-observed",
26022
+ createdAt: ts,
26023
+ lastSeenAt: ts,
26024
+ navSuccesses: 0,
26025
+ navFailures: 0,
26026
+ attrs: {
26027
+ anchorProvenance: "restated",
26028
+ restatedFrom: guessedPaths[0] ?? "",
26029
+ restatedAt: ts
26030
+ }
26031
+ });
26032
+ for (const e of legacy) {
26033
+ if (e.to !== target.id) store2.closeEdge(e.id, ts);
26034
+ }
26035
+ report.retiredGuesses += legacy.filter((e) => e.to !== target.id).length;
26036
+ report.repaired.push({
26037
+ problemId: p.id,
26038
+ problem: p.description,
26039
+ guessed: guessedPaths[0] ?? "",
26040
+ restated: target.path
26041
+ });
26042
+ } catch {
26043
+ }
26044
+ }
26045
+ return report;
26046
+ }
25280
26047
  function backfillLegacyAnchors(store2, ts) {
25281
26048
  const report = {
25282
26049
  demotedEdges: 0,
@@ -25316,7 +26083,11 @@ function backfillLegacyAnchors(store2, ts) {
25316
26083
  store2,
25317
26084
  sol,
25318
26085
  `auto-closed off a pre-provenance anchor (guessed ${guessedAnchor}) \u2014 confirm the problem is really fixed, or reopen it`,
25319
- ts
26086
+ ts,
26087
+ // "or reopen it" is half the ask, and the nightly reopen takes that
26088
+ // branch — so record what would answer this, or the flag can never be
26089
+ // lowered and the band fills with settled questions.
26090
+ "parentProblemOpen"
25320
26091
  );
25321
26092
  store2.updateNode(p.id, {
25322
26093
  attrs: { ...p.attrs, resolutionSuspect: true },
@@ -25350,7 +26121,7 @@ function pagerank(input) {
25350
26121
  const ids = input.nodeIds;
25351
26122
  const n = ids.length;
25352
26123
  if (n === 0) {
25353
- return { scores: /* @__PURE__ */ new Map(), iterations: 0, converged: true };
26124
+ return { scores: /* @__PURE__ */ new Map(), iterations: 0, converged: true, danglingRank: 0 };
25354
26125
  }
25355
26126
  const index = /* @__PURE__ */ new Map();
25356
26127
  for (let i2 = 0; i2 < n; i2++) index.set(ids[i2], i2);
@@ -25422,8 +26193,12 @@ function pagerank(input) {
25422
26193
  }
25423
26194
  }
25424
26195
  const scores = /* @__PURE__ */ new Map();
25425
- for (let i2 = 0; i2 < n; i2++) scores.set(ids[i2], score2[i2]);
25426
- return { scores, iterations: iter, converged };
26196
+ let danglingRank = 0;
26197
+ for (let i2 = 0; i2 < n; i2++) {
26198
+ scores.set(ids[i2], score2[i2]);
26199
+ if (dangling[i2]) danglingRank += score2[i2];
26200
+ }
26201
+ return { scores, iterations: iter, converged, danglingRank };
25427
26202
  }
25428
26203
  function markLandmarks(scores, percentile = 0.1, filter) {
25429
26204
  const entries = [...scores.entries()];
@@ -25433,7 +26208,7 @@ function markLandmarks(scores, percentile = 0.1, filter) {
25433
26208
  }
25434
26209
  }
25435
26210
  if (entries.length === 0) return /* @__PURE__ */ new Set();
25436
- entries.sort((a, b) => b[1] - a[1]);
26211
+ entries.sort((a, b) => b[1] - a[1] || (a[0] < b[0] ? -1 : a[0] > b[0] ? 1 : 0));
25437
26212
  const cutoff = Math.max(1, Math.floor(entries.length * percentile));
25438
26213
  const out2 = /* @__PURE__ */ new Set();
25439
26214
  for (let i2 = 0; i2 < cutoff; i2++) {
@@ -25671,8 +26446,86 @@ function motifDecision(input) {
25671
26446
  };
25672
26447
  }
25673
26448
 
25674
- // ../../packages/local-graph/src/community.ts
25675
- init_src2();
26449
+ // ../../packages/math/src/pagerank-local.ts
26450
+ function pagerankLocal(input) {
26451
+ const damping = input.damping ?? 0.85;
26452
+ const tol = input.tolerance ?? 1e-6;
26453
+ const maxIter = input.maxIterations ?? 100;
26454
+ const ids = input.regionIds;
26455
+ const n = ids.length;
26456
+ if (n === 0 || input.globalN === 0) {
26457
+ return { scores: /* @__PURE__ */ new Map(), iterations: 0, converged: true };
26458
+ }
26459
+ const index = /* @__PURE__ */ new Map();
26460
+ for (let i2 = 0; i2 < n; i2++) index.set(ids[i2], i2);
26461
+ const base = (1 - damping) / input.globalN;
26462
+ const outSum = new Float64Array(n);
26463
+ const inflow = new Float64Array(n);
26464
+ let score2 = new Float64Array(n);
26465
+ for (let i2 = 0; i2 < n; i2++) {
26466
+ const id = ids[i2];
26467
+ outSum[i2] = input.outSum.get(id) ?? 0;
26468
+ inflow[i2] = input.boundaryInflow.get(id) ?? 0;
26469
+ score2[i2] = input.rank0.get(id) ?? base;
26470
+ }
26471
+ const rowLen = new Int32Array(n);
26472
+ let edgeCount = 0;
26473
+ for (const [from, edges] of input.out) {
26474
+ const fi = index.get(from);
26475
+ if (fi === void 0) continue;
26476
+ let inSet = 0;
26477
+ for (const e of edges) if (index.has(e.to)) inSet++;
26478
+ rowLen[fi] = inSet;
26479
+ edgeCount += inSet;
26480
+ }
26481
+ const rowStart = new Int32Array(n + 1);
26482
+ for (let i2 = 0; i2 < n; i2++) rowStart[i2 + 1] = rowStart[i2] + rowLen[i2];
26483
+ const colIdx = new Int32Array(edgeCount);
26484
+ const colW = new Float64Array(edgeCount);
26485
+ const cursor = rowStart.slice(0, n);
26486
+ for (const [from, edges] of input.out) {
26487
+ const fi = index.get(from);
26488
+ if (fi === void 0) continue;
26489
+ for (const e of edges) {
26490
+ const ti = index.get(e.to);
26491
+ if (ti === void 0) continue;
26492
+ const c = cursor[fi];
26493
+ cursor[fi] = c + 1;
26494
+ colIdx[c] = ti;
26495
+ colW[c] = e.weight;
26496
+ }
26497
+ }
26498
+ const externalDangling = input.externalDanglingRank ?? 0;
26499
+ let next = new Float64Array(n);
26500
+ let iter = 0;
26501
+ let converged = false;
26502
+ for (; iter < maxIter; iter++) {
26503
+ let internalDangling = 0;
26504
+ for (let i2 = 0; i2 < n; i2++) if (outSum[i2] <= 0) internalDangling += score2[i2];
26505
+ const danglingShare = damping * (internalDangling + externalDangling) / input.globalN;
26506
+ for (let i2 = 0; i2 < n; i2++) next[i2] = base + danglingShare + damping * inflow[i2];
26507
+ for (let i2 = 0; i2 < n; i2++) {
26508
+ const os2 = outSum[i2];
26509
+ if (os2 <= 0) continue;
26510
+ const f = damping * score2[i2] / os2;
26511
+ const end = rowStart[i2 + 1];
26512
+ for (let c = rowStart[i2]; c < end; c++) next[colIdx[c]] += f * colW[c];
26513
+ }
26514
+ let diff = 0;
26515
+ for (let i2 = 0; i2 < n; i2++) diff += Math.abs(next[i2] - score2[i2]);
26516
+ const tmp = score2;
26517
+ score2 = next;
26518
+ next = tmp;
26519
+ if (diff < tol) {
26520
+ iter++;
26521
+ converged = true;
26522
+ break;
26523
+ }
26524
+ }
26525
+ const scores = /* @__PURE__ */ new Map();
26526
+ for (let i2 = 0; i2 < n; i2++) scores.set(ids[i2], score2[i2]);
26527
+ return { scores, iterations: iter, converged };
26528
+ }
25676
26529
 
25677
26530
  // ../../packages/local-graph/src/triage.ts
25678
26531
  init_src();
@@ -25681,95 +26534,8 @@ init_src();
25681
26534
  init_src2();
25682
26535
  var DRIFT_VALUES = new Set(Object.values(DRIFT_KIND));
25683
26536
 
25684
- // ../../packages/local-graph/src/problem-dedup.ts
25685
- init_src();
25686
- init_src();
25687
- var REDIRECT_EDGES = [
25688
- "CAUSED_BY",
25689
- "SOLVED_BY",
25690
- "FIXED_BY",
25691
- "ANCHORED_AT",
25692
- "MANIFESTED_IN",
25693
- "EVIDENCED_BY"
25694
- ];
25695
- function corroborations(n) {
25696
- return Number(n.attrs["corroborations"] ?? 0);
25697
- }
25698
- function overlap(a, b) {
25699
- if (a.size === 0 || b.size === 0) return 0;
25700
- let inter = 0;
25701
- for (const x of a) if (b.has(x)) inter++;
25702
- return inter / Math.min(a.size, b.size);
25703
- }
25704
- function mergeDuplicateProblems(store2, opts) {
25705
- const minOverlap = opts.minOverlap ?? 0.85;
25706
- const minTokens = opts.minTokens ?? 4;
25707
- const report = { clusters: 0, merged: 0 };
25708
- const open = store2.findNodesByLabel("Problem").filter((p) => p.attrs["resolvedAt"] == null && p.attrs["mergedInto"] === void 0);
25709
- const tokens = /* @__PURE__ */ new Map();
25710
- for (const p of open) tokens.set(p.id, new Set(conceptTokens(p.description)));
25711
- const consumed = /* @__PURE__ */ new Set();
25712
- store2.transaction(() => {
25713
- for (let i2 = 0; i2 < open.length; i2++) {
25714
- const a = open[i2];
25715
- if (consumed.has(a.id)) continue;
25716
- const cluster = [a];
25717
- const ta = tokens.get(a.id);
25718
- for (let j = i2 + 1; j < open.length; j++) {
25719
- const b = open[j];
25720
- if (consumed.has(b.id)) continue;
25721
- const tb = tokens.get(b.id);
25722
- if (Math.min(ta.size, tb.size) < minTokens) continue;
25723
- if (overlap(ta, tb) >= minOverlap) {
25724
- cluster.push(b);
25725
- consumed.add(b.id);
25726
- }
25727
- }
25728
- if (cluster.length < 2) continue;
25729
- report.clusters++;
25730
- cluster.sort((x, y) => corroborations(y) - corroborations(x) || x.createdAt - y.createdAt);
25731
- const survivor = cluster[0];
25732
- for (const dup of cluster.slice(1)) {
25733
- foldDuplicateProblem(store2, dup, survivor, opts.ts);
25734
- report.merged++;
25735
- }
25736
- }
25737
- });
25738
- return report;
25739
- }
25740
- function foldDuplicateProblem(store2, dup, survivor, ts) {
25741
- const surv = store2.getNode(survivor.id);
25742
- if (!surv) return;
25743
- const sources = new Set(surv.attrs["sources"] ?? []);
25744
- for (const s of dup.attrs["sources"] ?? []) sources.add(s);
25745
- store2.updateNode(survivor.id, {
25746
- attrs: {
25747
- ...surv.attrs,
25748
- sources: [...sources],
25749
- corroborations: corroborations(surv) + corroborations(dup) + 1
25750
- },
25751
- cumulativeHits: (surv.cumulativeHits ?? 0) + (dup.cumulativeHits ?? 0),
25752
- lastUpdatedAt: ts
25753
- });
25754
- for (const e of store2.outEdges(dup.id, REDIRECT_EDGES)) {
25755
- if (e.to === survivor.id) continue;
25756
- const id = `edge_${digest({ from: survivor.id, type: e.type, to: e.to })}`.slice(0, 24);
25757
- if (store2.getEdge(id)) continue;
25758
- const redirected = {
25759
- ...e,
25760
- id,
25761
- from: survivor.id,
25762
- createdAt: ts,
25763
- lastSeenAt: ts
25764
- };
25765
- store2.mergeEdge(redirected);
25766
- }
25767
- store2.updateNode(dup.id, {
25768
- attrs: { ...dup.attrs, mergedInto: survivor.id, resolvedAs: "duplicate", resolvedAt: ts },
25769
- lastUpdatedAt: ts
25770
- });
25771
- store2.closeNode(dup.id, ts);
25772
- }
26537
+ // ../../packages/local-graph/src/community.ts
26538
+ init_src2();
25773
26539
 
25774
26540
  // ../../packages/local-graph/src/tools.ts
25775
26541
  init_src();
@@ -25786,6 +26552,9 @@ function rankToolsForHandles(store2, limit = 5) {
25786
26552
  // ../../packages/local-graph/src/principle-sync.ts
25787
26553
  init_src2();
25788
26554
 
26555
+ // ../../packages/local-graph/src/mechanism-liveness.ts
26556
+ var STALL_MIN_SPAN_MS = 60 * 60 * 1e3;
26557
+
25789
26558
  // ../../packages/generalizer/src/generalizer.ts
25790
26559
  init_src2();
25791
26560
  init_src();
@@ -25905,7 +26674,164 @@ function promoteMotifs(store2, t) {
25905
26674
  }
25906
26675
 
25907
26676
  // ../../packages/generalizer/src/nightly.ts
25908
- function runNightlyPipeline(store2) {
26677
+ var FULL_RESCORE_EVERY = 12;
26678
+ var INCREMENTAL_REGION_MAX_FRACTION = 0.2;
26679
+ var INCREMENTAL_HOPS = 3;
26680
+ function runGraphRescore(store2, opts = {}) {
26681
+ const lastRescoreAt = Number(store2.getMeta?.("lastRescoreAt") ?? 0);
26682
+ const sinceFull = Number(store2.getMeta?.("rescoresSinceFull") ?? 0);
26683
+ const incrementalCapable = !opts.forceFull && lastRescoreAt > 0 && sinceFull < FULL_RESCORE_EVERY - 1 && !!store2.getMeta && !!store2.setMeta && !!store2.dirtyNodeIdsSince && !!store2.edgeEndpointsTouchedSince && !!store2.outEdgesForMany && !!store2.inEdgesForMany && !!store2.ranksForMany && !!store2.landmarkSweepRows;
26684
+ if (incrementalCapable) {
26685
+ const started = Date.now();
26686
+ const inc = tryIncrementalRescore(store2, lastRescoreAt, started);
26687
+ if (inc) {
26688
+ store2.setMeta("lastRescoreAt", String(started));
26689
+ store2.setMeta("rescoresSinceFull", String(sinceFull + 1));
26690
+ return inc;
26691
+ }
26692
+ }
26693
+ const report = runFullRescore(store2);
26694
+ store2.setMeta?.("lastRescoreAt", String(report.startedAt));
26695
+ store2.setMeta?.("rescoresSinceFull", "0");
26696
+ store2.setMeta?.("danglingRankShare", String(report.danglingRank));
26697
+ const { startedAt: _drop, danglingRank: _drop2, ...rest } = report;
26698
+ return rest;
26699
+ }
26700
+ function tryIncrementalRescore(store2, lastRescoreAt, started) {
26701
+ const allowedTypes = new Set(pagerankEdgeTypes());
26702
+ const liveN = store2.nodeCount();
26703
+ const cap = Math.max(1e3, Math.floor(liveN * INCREMENTAL_REGION_MAX_FRACTION));
26704
+ const region = new Set(store2.dirtyNodeIdsSince(lastRescoreAt));
26705
+ for (const e of store2.edgeEndpointsTouchedSince(lastRescoreAt)) {
26706
+ region.add(e.from);
26707
+ region.add(e.to);
26708
+ }
26709
+ if (region.size > cap) return null;
26710
+ let frontier = [...region];
26711
+ for (let hop = 0; hop < INCREMENTAL_HOPS && frontier.length > 0; hop++) {
26712
+ const next = [];
26713
+ for (const e of store2.outEdgesForMany(frontier)) {
26714
+ if (!allowedTypes.has(e.type)) continue;
26715
+ if (!region.has(e.to)) {
26716
+ region.add(e.to);
26717
+ next.push(e.to);
26718
+ }
26719
+ }
26720
+ if (region.size > cap) return null;
26721
+ frontier = next;
26722
+ }
26723
+ const rank0 = store2.ranksForMany([...region]);
26724
+ const regionIds = [...rank0.keys()];
26725
+ if (regionIds.length === 0) {
26726
+ return {
26727
+ scoredNodes: 0,
26728
+ iterations: 0,
26729
+ converged: true,
26730
+ landmarks: 0,
26731
+ communities: 0,
26732
+ motifsPromoted: 0,
26733
+ techniques: 0,
26734
+ antipatterns: 0,
26735
+ pageRankWritten: 0,
26736
+ landmarkFlips: 0,
26737
+ mode: "incremental",
26738
+ regionSize: 0,
26739
+ durationMs: Date.now() - started
26740
+ };
26741
+ }
26742
+ const inRegion = new Set(regionIds);
26743
+ const out2 = /* @__PURE__ */ new Map();
26744
+ const outSum = /* @__PURE__ */ new Map();
26745
+ for (const e of store2.outEdgesForMany(regionIds)) {
26746
+ if (!allowedTypes.has(e.type)) continue;
26747
+ const w = EDGE_WEIGHT[e.type] ?? 1;
26748
+ if (w <= 0) continue;
26749
+ outSum.set(e.from, (outSum.get(e.from) ?? 0) + w);
26750
+ if (!inRegion.has(e.to)) continue;
26751
+ const l = out2.get(e.from);
26752
+ if (l) l.push({ to: e.to, weight: w });
26753
+ else out2.set(e.from, [{ to: e.to, weight: w }]);
26754
+ }
26755
+ const boundaryEdges = store2.inEdgesForMany(regionIds).filter((e) => allowedTypes.has(e.type) && !inRegion.has(e.from) && (EDGE_WEIGHT[e.type] ?? 1) > 0);
26756
+ const boundarySources = [...new Set(boundaryEdges.map((e) => e.from))];
26757
+ if (boundarySources.length > cap) return null;
26758
+ const boundaryRanks = store2.ranksForMany(boundarySources);
26759
+ const boundaryOutSum = /* @__PURE__ */ new Map();
26760
+ for (const e of store2.outEdgesForMany(boundarySources)) {
26761
+ if (!allowedTypes.has(e.type)) continue;
26762
+ const w = EDGE_WEIGHT[e.type] ?? 1;
26763
+ if (w > 0) boundaryOutSum.set(e.from, (boundaryOutSum.get(e.from) ?? 0) + w);
26764
+ }
26765
+ const boundaryInflow = /* @__PURE__ */ new Map();
26766
+ for (const e of boundaryEdges) {
26767
+ const r = boundaryRanks.get(e.from);
26768
+ const os2 = boundaryOutSum.get(e.from);
26769
+ if (r === void 0 || !os2) continue;
26770
+ const w = EDGE_WEIGHT[e.type] ?? 1;
26771
+ boundaryInflow.set(e.to, (boundaryInflow.get(e.to) ?? 0) + r * w / os2);
26772
+ }
26773
+ const globalDangling = Number(store2.getMeta("danglingRankShare") ?? 0);
26774
+ let regionDangling = 0;
26775
+ for (const id of regionIds) {
26776
+ if ((outSum.get(id) ?? 0) <= 0) regionDangling += rank0.get(id) ?? 0;
26777
+ }
26778
+ const result = pagerankLocal({
26779
+ regionIds,
26780
+ rank0,
26781
+ out: out2,
26782
+ outSum,
26783
+ boundaryInflow,
26784
+ globalN: liveN,
26785
+ externalDanglingRank: Math.max(0, globalDangling - regionDangling),
26786
+ damping: 0.85,
26787
+ tolerance: 1e-6,
26788
+ maxIterations: 100
26789
+ });
26790
+ let pageRankWritten = 0;
26791
+ store2.transaction(() => {
26792
+ for (const [id, score2] of result.scores) {
26793
+ if (Math.abs(score2 - (rank0.get(id) ?? 0)) < 1e-9) continue;
26794
+ store2.setPageRank(id, score2);
26795
+ pageRankWritten++;
26796
+ }
26797
+ });
26798
+ const sweep = store2.landmarkSweepRows();
26799
+ const candidates = /* @__PURE__ */ new Map();
26800
+ for (const row of sweep) {
26801
+ if (row.label === "Pattern" || row.label === "RootCause") {
26802
+ candidates.set(row.id, result.scores.get(row.id) ?? row.pageRank);
26803
+ }
26804
+ }
26805
+ const want = markLandmarks(candidates, 0.1);
26806
+ for (const row of sweep) if (row.memoryTier === "persistent") want.add(row.id);
26807
+ let landmarkFlips = 0;
26808
+ store2.transaction(() => {
26809
+ for (const row of sweep) {
26810
+ if (row.extractionSource === "bko-inferred") continue;
26811
+ const should = want.has(row.id);
26812
+ if (row.isLandmark === should) continue;
26813
+ store2.setLandmark(row.id, should);
26814
+ landmarkFlips++;
26815
+ }
26816
+ });
26817
+ return {
26818
+ scoredNodes: regionIds.length,
26819
+ iterations: result.iterations,
26820
+ converged: result.converged,
26821
+ landmarks: want.size,
26822
+ communities: 0,
26823
+ // deferred to the full backstop — see mode docs
26824
+ motifsPromoted: 0,
26825
+ techniques: 0,
26826
+ antipatterns: 0,
26827
+ pageRankWritten,
26828
+ landmarkFlips,
26829
+ mode: "incremental",
26830
+ regionSize: regionIds.length,
26831
+ durationMs: Date.now() - started
26832
+ };
26833
+ }
26834
+ function runFullRescore(store2) {
25909
26835
  const started = Date.now();
25910
26836
  const allowedTypes = new Set(pagerankEdgeTypes());
25911
26837
  const nodeIds = [];
@@ -25931,10 +26857,12 @@ function runNightlyPipeline(store2) {
25931
26857
  maxIterations: 100
25932
26858
  });
25933
26859
  const scored = result.scores.size;
26860
+ let pageRankWritten = 0;
25934
26861
  store2.transaction(() => {
25935
26862
  for (const [id, score2] of result.scores) {
25936
26863
  if (Math.abs(score2 - (meta3.get(id)?.pageRank ?? 0)) < 1e-9) continue;
25937
26864
  store2.setPageRank(id, score2);
26865
+ pageRankWritten++;
25938
26866
  }
25939
26867
  });
25940
26868
  const landmarkCandidates = /* @__PURE__ */ new Map();
@@ -25949,11 +26877,13 @@ function runNightlyPipeline(store2) {
25949
26877
  for (const id of nodeIds) {
25950
26878
  if (meta3.get(id)?.memoryTier === "persistent") allLandmarks.add(id);
25951
26879
  }
26880
+ let landmarkFlips = 0;
25952
26881
  store2.transaction(() => {
25953
26882
  for (const id of nodeIds) {
25954
26883
  const want = allLandmarks.has(id);
25955
26884
  if ((meta3.get(id)?.isLandmark ?? false) === want) continue;
25956
26885
  store2.setLandmark(id, want);
26886
+ landmarkFlips++;
25957
26887
  }
25958
26888
  });
25959
26889
  const MOTIF_LABELS = /* @__PURE__ */ new Set(["Pattern", "Technique", "AntiPattern"]);
@@ -25988,8 +26918,6 @@ function runNightlyPipeline(store2) {
25988
26918
  for (const [id, c] of comm.community) store2.updateNode(id, { community: c });
25989
26919
  });
25990
26920
  const motifs = promoteMotifs(store2, started);
25991
- const designResolved = resolveDesignProblems(store2, started);
25992
- const cry = crystallize(store2, { ts: started });
25993
26921
  return {
25994
26922
  scoredNodes: scored,
25995
26923
  iterations: result.iterations,
@@ -25999,15 +26927,61 @@ function runNightlyPipeline(store2) {
25999
26927
  motifsPromoted: motifs.promoted,
26000
26928
  techniques: motifs.techniques,
26001
26929
  antipatterns: motifs.antipatterns,
26002
- skillsInduced: 0,
26003
- // skills are cloud-induced now (see above)
26004
- skillsRefreshed: 0,
26930
+ pageRankWritten,
26931
+ landmarkFlips,
26932
+ mode: "full",
26933
+ regionSize: 0,
26934
+ startedAt: started,
26935
+ danglingRank: result.danglingRank,
26936
+ durationMs: Date.now() - started
26937
+ };
26938
+ }
26939
+ function runSemanticMaintenance(store2) {
26940
+ const started = Date.now();
26941
+ reopenAutoClosedProblems(store2, started);
26942
+ const revisits = clearAnsweredRevisits(store2, started);
26943
+ const fixCandidates = clearSettledFixCandidates(store2, started);
26944
+ const designResolved = markFixCandidates(store2, started);
26945
+ const cry = crystallize(store2, { ts: started });
26946
+ return {
26005
26947
  designResolved,
26948
+ revisitsCleared: revisits.cleared,
26949
+ revisitsStanding: revisits.standing,
26950
+ fixCandidatesSettled: fixCandidates.answered + fixCandidates.ignored + fixCandidates.unsubstantiated,
26951
+ fixCandidates,
26006
26952
  claimsEvaluated: cry.evaluated,
26007
26953
  claimsDerived: cry.derived.length,
26008
26954
  durationMs: Date.now() - started
26009
26955
  };
26010
26956
  }
26957
+ function runNightlyPipeline(store2) {
26958
+ const started = Date.now();
26959
+ const rescore = runGraphRescore(store2);
26960
+ const semantic = runSemanticMaintenance(store2);
26961
+ return {
26962
+ scoredNodes: rescore.scoredNodes,
26963
+ iterations: rescore.iterations,
26964
+ converged: rescore.converged,
26965
+ landmarks: rescore.landmarks,
26966
+ communities: rescore.communities,
26967
+ motifsPromoted: rescore.motifsPromoted,
26968
+ techniques: rescore.techniques,
26969
+ antipatterns: rescore.antipatterns,
26970
+ skillsInduced: 0,
26971
+ // skills are cloud-induced now (see above)
26972
+ skillsRefreshed: 0,
26973
+ pageRankWritten: rescore.pageRankWritten,
26974
+ landmarkFlips: rescore.landmarkFlips,
26975
+ mode: rescore.mode,
26976
+ regionSize: rescore.regionSize,
26977
+ designResolved: semantic.designResolved,
26978
+ revisitsCleared: semantic.revisitsCleared,
26979
+ fixCandidatesSettled: semantic.fixCandidatesSettled,
26980
+ claimsEvaluated: semantic.claimsEvaluated,
26981
+ claimsDerived: semantic.claimsDerived,
26982
+ durationMs: Date.now() - started
26983
+ };
26984
+ }
26011
26985
  function codeAnchorProjection(store2, semanticIds, opts = {}) {
26012
26986
  const anchorToNodes = /* @__PURE__ */ new Map();
26013
26987
  for (const id of semanticIds) {
@@ -26052,12 +27026,14 @@ var AGENTS_POINTER_BODY = [
26052
27026
  init_src2();
26053
27027
  function buildSnapshot(opts) {
26054
27028
  const problems = opts.store.findNodesByLabel("Problem").filter((p) => p.attrs["mergedInto"] === void 0);
26055
- const allProblems = problems.filter((p) => p.attrs["resolvedAt"] == null);
27029
+ const stillOpen = problems.filter((p) => p.attrs["resolvedAt"] == null);
27030
+ const allProblems = stillOpen.filter((p) => !isConstraintProblem(p));
26056
27031
  allProblems.sort((a, b) => b.lastUpdatedAt - a.lastUpdatedAt);
26057
27032
  const recent = allProblems.slice(0, 8).map((p) => ({
26058
27033
  node: p,
26059
27034
  anchors: opts.store.outEdges(p.id, ["MANIFESTED_IN", "EVIDENCED_BY"])
26060
27035
  }));
27036
+ const recentConstraints = stillOpen.filter((p) => isConstraintProblem(p)).sort((a, b) => b.lastUpdatedAt - a.lastUpdatedAt).slice(0, 3);
26061
27037
  const recentResolved = problems.filter((p) => p.attrs["resolvedAt"] != null && p.attrs["resolvedAs"] == null).sort((a, b) => Number(b.attrs["resolvedAt"] ?? 0) - Number(a.attrs["resolvedAt"] ?? 0)).slice(0, 4).map((p) => {
26062
27038
  const solEdge = opts.store.outEdges(p.id, ["SOLVED_BY"])[0];
26063
27039
  const solution = solEdge ? opts.store.getNode(solEdge.to) ?? void 0 : void 0;
@@ -26085,10 +27061,13 @@ function buildSnapshot(opts) {
26085
27061
  episodeId,
26086
27062
  problems: problems2
26087
27063
  }));
26088
- const needsRevisit = listNeedsRevisit(
26089
- opts.store,
26090
- (opts.now ?? /* @__PURE__ */ new Date()).getTime()
26091
- ).slice(0, 10);
27064
+ const revisitSeen = /* @__PURE__ */ new Set();
27065
+ const needsRevisit = listNeedsRevisit(opts.store, (opts.now ?? /* @__PURE__ */ new Date()).getTime()).filter((r) => {
27066
+ const key = `${r.label}:${r.description.trim().toLowerCase()}`;
27067
+ if (revisitSeen.has(key)) return false;
27068
+ revisitSeen.add(key);
27069
+ return true;
27070
+ }).slice(0, 5);
26092
27071
  const norm = (x) => x.toLowerCase().replace(/[^a-z0-9]+/g, "");
26093
27072
  const pkgBase = (x) => {
26094
27073
  const at = x.lastIndexOf("@");
@@ -26124,7 +27103,9 @@ function buildSnapshot(opts) {
26124
27103
  profileContext,
26125
27104
  recentProblems: recent,
26126
27105
  recentResolved,
27106
+ recentConstraints,
26127
27107
  ...causalNudge ? { causalNudge } : {},
27108
+ ...opts.selfCiteSkips && opts.selfCiteSkips > 0 ? { selfCiteSkips: opts.selfCiteSkips } : {},
26128
27109
  ...domainNudge ? { domainNudge } : {},
26129
27110
  motifs,
26130
27111
  reviewCount: opts.reviewCount,
@@ -26175,10 +27156,16 @@ function sliceForFile(store2, relPath) {
26175
27156
  }
26176
27157
  const fp = priorsForFile(store2, relPath);
26177
27158
  const priors = fp ? {
26178
- openProblems: fp.openProblems.slice(0, 3).map((p) => ({ id: p.id, description: p.description })),
27159
+ openProblems: fp.openProblems.slice(0, 3).map((p) => ({
27160
+ id: p.id,
27161
+ description: p.description,
27162
+ ...typeof p.attrs["fixCandidateFile"] === "string" ? { fixCandidateFile: p.attrs["fixCandidateFile"] } : {}
27163
+ })),
27164
+ constraints: fp.constraints.slice(0, 2).map((c) => ({ id: c.id, description: c.description })),
27165
+ resolvedProblems: fp.resolvedProblems.slice(0, 3).map((p) => ({ id: p.id, description: p.description })),
26179
27166
  related: fp.related.slice(0, 4).map((n) => ({ id: n.id, label: n.label, description: n.description })),
26180
27167
  solutionsByProblem: Object.fromEntries(
26181
- fp.openProblems.slice(0, 3).map((p) => [
27168
+ [...fp.openProblems.slice(0, 3), ...fp.resolvedProblems.slice(0, 3)].map((p) => [
26182
27169
  p.id,
26183
27170
  (fp.solutionsByProblem.get(p.id) ?? []).slice(0, 4).map((s) => ({ id: s.id, description: s.description }))
26184
27171
  ])
@@ -26215,37 +27202,37 @@ init_src3();
26215
27202
  // ../../node_modules/.pnpm/env-paths@3.0.0/node_modules/env-paths/index.js
26216
27203
  import os from "node:os";
26217
27204
  import process3 from "node:process";
26218
- var homedir = os.homedir();
27205
+ var homedir2 = os.homedir();
26219
27206
  var tmpdir = os.tmpdir();
26220
27207
  var { env } = process3;
26221
27208
 
26222
27209
  // src/paths.ts
26223
- import { dirname as dirname2, join as join3 } from "node:path";
27210
+ import { dirname as dirname2, join as join4 } from "node:path";
26224
27211
  function workspaceDir(workspaceRoot) {
26225
- return join3(workspaceRoot, ".errata");
27212
+ return join4(workspaceRoot, ".errata");
26226
27213
  }
26227
27214
  function workspacePaths(root) {
26228
27215
  const dir = workspaceDir(root);
26229
27216
  return {
26230
27217
  root,
26231
27218
  configDir: dir,
26232
- workspaceJson: join3(dir, "workspace.json"),
26233
- eventLog: join3(dir, "eventlog.sqlite"),
26234
- castalia: join3(dir, "castalia.db"),
26235
- reviewQueue: join3(dir, "review-queue.json"),
26236
- outbox: join3(dir, "outbox"),
26237
- daemonLock: join3(dir, "daemon.lock"),
26238
- identityAudit: join3(dir, "identity-audit.log"),
26239
- skillsDir: join3(dir, "skills"),
26240
- skillsManifest: join3(dir, "skills.json")
27219
+ workspaceJson: join4(dir, "workspace.json"),
27220
+ eventLog: join4(dir, "eventlog.sqlite"),
27221
+ castalia: join4(dir, "castalia.db"),
27222
+ reviewQueue: join4(dir, "review-queue.json"),
27223
+ outbox: join4(dir, "outbox"),
27224
+ daemonLock: join4(dir, "daemon.lock"),
27225
+ identityAudit: join4(dir, "identity-audit.log"),
27226
+ skillsDir: join4(dir, "skills"),
27227
+ skillsManifest: join4(dir, "skills.json")
26241
27228
  };
26242
27229
  }
26243
27230
 
26244
27231
  // src/reconcile.ts
26245
27232
  init_src3();
26246
27233
  import { execFileSync as execFileSync2 } from "node:child_process";
26247
- import { readdirSync as readdirSync2, statSync as statSync2 } from "node:fs";
26248
- import { join as join4, relative as relative2, sep as sep2 } from "node:path";
27234
+ import { readdirSync as readdirSync3, statSync as statSync3 } from "node:fs";
27235
+ import { join as join5, relative as relative2, sep as sep2 } from "node:path";
26249
27236
  var IGNORED = /[\\/](?:\.git|node_modules|\.errata|dist|__pycache__)(?:[\\/]|$)/;
26250
27237
  var SOURCE_RE = /\.(ts|tsx|js|jsx|mjs|cjs|py)$/i;
26251
27238
  function gitSourceFiles(root) {
@@ -26262,7 +27249,7 @@ function gitSourceFiles(root) {
26262
27249
  const out2 = [];
26263
27250
  for (const rel of stdout.split("\0")) {
26264
27251
  if (!rel || !SOURCE_RE.test(rel)) continue;
26265
- const abs = join4(root, rel);
27252
+ const abs = join5(root, rel);
26266
27253
  if (IGNORED.test(abs)) continue;
26267
27254
  out2.push(abs);
26268
27255
  }
@@ -26271,13 +27258,13 @@ function gitSourceFiles(root) {
26271
27258
  function* walkSource(dir) {
26272
27259
  let entries;
26273
27260
  try {
26274
- entries = readdirSync2(dir, { withFileTypes: true });
27261
+ entries = readdirSync3(dir, { withFileTypes: true });
26275
27262
  } catch {
26276
27263
  return;
26277
27264
  }
26278
27265
  for (const e of entries) {
26279
27266
  const name2 = String(e.name);
26280
- const full = join4(dir, name2);
27267
+ const full = join5(dir, name2);
26281
27268
  if (IGNORED.test(full)) continue;
26282
27269
  if (e.isDirectory()) yield* walkSource(full);
26283
27270
  else if (SOURCE_RE.test(name2)) yield full;
@@ -26286,12 +27273,18 @@ function* walkSource(dir) {
26286
27273
  function listSourceFiles(root) {
26287
27274
  return gitSourceFiles(root) ?? walkSource(root);
26288
27275
  }
26289
- function findStaleFiles(store2, rootPath, workspaceId) {
27276
+ var SCAN_YIELD_EVERY = 100;
27277
+ var LIVENESS_CHUNK = 4e3;
27278
+ async function findStaleFiles(store2, rootPath, workspaceId) {
26290
27279
  const stale = [];
27280
+ const pending = [];
27281
+ const allTargets = [];
27282
+ let scanned = 0;
26291
27283
  for (const abs of listSourceFiles(rootPath)) {
27284
+ if (++scanned % SCAN_YIELD_EVERY === 0) await new Promise((r) => setImmediate(r));
26292
27285
  let mtimeMs;
26293
27286
  try {
26294
- mtimeMs = statSync2(abs).mtimeMs;
27287
+ mtimeMs = statSync3(abs).mtimeMs;
26295
27288
  } catch {
26296
27289
  continue;
26297
27290
  }
@@ -26299,32 +27292,52 @@ function findStaleFiles(store2, rootPath, workspaceId) {
26299
27292
  const fnode = store2.getNode(fileNodeId(workspaceId, rel));
26300
27293
  if (!fnode) {
26301
27294
  stale.push(abs);
27295
+ } else if ((fnode.validTo ?? null) !== null) {
27296
+ stale.push(abs);
26302
27297
  } else if (fnode.lastUpdatedAt < mtimeMs) {
26303
27298
  stale.push(abs);
26304
27299
  } else {
26305
27300
  const edges = store2.outEdges(fnode.id, ["DEFINES", "CONTAINS"]);
26306
27301
  if (edges.length === 0) {
26307
27302
  stale.push(abs);
26308
- } else if (edges.some((e) => !isLive(store2.getNode(e.to)))) {
26309
- stale.push(abs);
27303
+ } else {
27304
+ const targets = edges.map((e) => e.to);
27305
+ pending.push({ abs, targets });
27306
+ allTargets.push(...targets);
26310
27307
  }
26311
27308
  }
26312
27309
  }
27310
+ const live = /* @__PURE__ */ new Set();
27311
+ for (let i2 = 0; i2 < allTargets.length; i2 += LIVENESS_CHUNK) {
27312
+ for (const id of store2.liveNodeIds(allTargets.slice(i2, i2 + LIVENESS_CHUNK))) live.add(id);
27313
+ if (i2 + LIVENESS_CHUNK < allTargets.length) await new Promise((r) => setImmediate(r));
27314
+ }
27315
+ for (const { abs, targets } of pending) {
27316
+ if (targets.some((id) => !live.has(id))) stale.push(abs);
27317
+ }
26313
27318
  return stale;
26314
27319
  }
26315
- function isLive(n) {
26316
- return n != null && (n.validTo ?? null) === null;
26317
- }
26318
27320
  async function reconcileStaleFiles(store2, rootPath, workspaceId) {
26319
- const stale = findStaleFiles(store2, rootPath, workspaceId);
27321
+ const stale = await findStaleFiles(store2, rootPath, workspaceId);
26320
27322
  if (stale.length === 0) return 0;
26321
27323
  let total = 0;
27324
+ let failedBatches = 0;
26322
27325
  const BATCH = 20;
26323
27326
  for (let i2 = 0; i2 < stale.length; i2 += BATCH) {
26324
- const r = await incrementalReindex(store2, rootPath, workspaceId, stale.slice(i2, i2 + BATCH));
26325
- total += r.filesReindexed;
27327
+ try {
27328
+ const r = await incrementalReindex(store2, rootPath, workspaceId, stale.slice(i2, i2 + BATCH));
27329
+ total += r.filesReindexed;
27330
+ } catch (err2) {
27331
+ failedBatches++;
27332
+ console.warn(
27333
+ `[errata] reconcile: batch ${i2 / BATCH + 1} failed (${stale.slice(i2, i2 + BATCH).length} file(s) skipped): ${err2 instanceof Error ? err2.message : err2}`
27334
+ );
27335
+ }
26326
27336
  if (i2 + BATCH < stale.length) await new Promise((res) => setImmediate(res));
26327
27337
  }
27338
+ if (failedBatches > 0) {
27339
+ console.warn(`[errata] reconcile: ${failedBatches} batch(es) failed; ${total} file(s) reindexed`);
27340
+ }
26328
27341
  return total;
26329
27342
  }
26330
27343
 
@@ -26377,6 +27390,7 @@ function runNightly() {
26377
27390
  const a = backfillLegacyAnchors(store, Date.now());
26378
27391
  anchorsDemoted = a.demotedEdges;
26379
27392
  resolutionsSuspect = a.suspects.length;
27393
+ repairLegacyAnchorsFromStatement(store, Date.now());
26380
27394
  } catch {
26381
27395
  }
26382
27396
  const report = runNightlyPipeline(store);