@indy2kro/agentenv 1.0.1 → 1.0.2

package/dist/commands/doctor.js

@@ -7,7 +7,8 @@ import { theme } from '../ui/theme.js';
 import { BINARY_MAP, getEnabledAgents, loadConfig, TOOL_KEYS, validateConfig, } from '../config/schema.js';
 import { findConfigPath, userConfigDir } from '../config/scopes.js';
 import { bashExecutable, detectShell } from '../shell/detector.js';
-import { getInstalledToolState, getMiseVersion, getShimsDirValue, isMiseInstalled, miseGlobalConfigPath, miseInstallInstructions, shimsDir, shimsDirOnPath, toolAvailabilityClassification, } from '../toolchain/mise.js';
+import { getInstalledToolState, getMiseVersion, getShimsDirValue, isMiseInstalled, miseGlobalConfigPath, miseInstallInstructions, PINNED_TOOL_VERSIONS, shimsDir, shimsDirOnPath, toolAvailabilityClassification, } from '../toolchain/mise.js';
+import { checkRtkInstallation } from '../toolchain/rtk.js';
 const STATUS_COLOR = {
     ok: theme.ok,
     warn: theme.warn,
@@ -52,16 +53,44 @@ export function renderDoctor(sections, options = {}) {
 function norm(p) {
     return path.resolve(p).replace(/\\/g, '/').toLowerCase();
 }
-function gatherDoctor() {
+/**
+ * Whether a section whose static title starts with `label` should be built,
+ * given the raw --section filter. Only skippable for a name-based filter — a
+ * numeric (index-based) filter can't be resolved without building the
+ * (conditionally-present-RTK-section) list first, so those still gather
+ * everything, correctly if not faster.
+ */
+export function wantsDoctorSection(sectionFilter, label) {
+    if (sectionFilter === undefined || /^\d+$/.test(sectionFilter))
+        return true;
+    return label.toLowerCase().startsWith(sectionFilter.toLowerCase());
+}
+export function gatherDoctor(sectionFilter, deps = {}) {
+    const detectShellFn = deps.detectShell ?? detectShell;
+    const existsSync = deps.existsSync ?? fs.existsSync;
+    const readFileSync = deps.readFileSync ?? fs.readFileSync;
+    const isMiseInstalledFn = deps.isMiseInstalled ?? isMiseInstalled;
+    const getMiseVersionFn = deps.getMiseVersion ?? getMiseVersion;
+    const miseGlobalConfigPathFn = deps.miseGlobalConfigPath ?? miseGlobalConfigPath;
+    const shimsDirFn = deps.shimsDir ?? shimsDir;
+    const shimsDirOnPathFn = deps.shimsDirOnPath ?? shimsDirOnPath;
+    const findConfigPathFn = deps.findConfigPath ?? findConfigPath;
+    const userConfigDirFn = deps.userConfigDir ?? userConfigDir;
+    const loadConfigFn = deps.loadConfig ?? loadConfig;
+    const getInstalledToolStateFn = deps.getInstalledToolState ?? getInstalledToolState;
+    const toolAvailabilityClassificationFn = deps.toolAvailabilityClassification ?? toolAvailabilityClassification;
+    const checkRtkInstallationFn = deps.checkRtkInstallation ?? checkRtkInstallation;
+    const isAgentInstalledFn = deps.isAgentInstalled ?? isAgentInstalled;
     const sections = [];
+    const wants = (label) => wantsDoctorSection(sectionFilter, label);
     // System level
-    const shell = detectShell();
+    const shell = detectShellFn();
     const system = [
         { status: 'ok', label: 'OS', detail: `${process.platform} (${process.arch})` },
     ];
     system.push({ status: 'ok', label: 'Shell', detail: shell.currentShell });
     if (process.platform === 'win32') {
-        if (shell.gitBashPath && fs.existsSync(bashExecutable(shell.gitBashPath))) {
+        if (shell.gitBashPath && existsSync(bashExecutable(shell.gitBashPath))) {
             system.push({
                 status: 'ok',
                 label: 'Git Bash',
@@ -79,8 +108,8 @@ function gatherDoctor() {
     sections.push({ title: 'System', items: system });
     // Mise + shims
     const miseItems = [];
-    if (isMiseInstalled()) {
-        miseItems.push({ status: 'ok', label: 'mise', detail: getMiseVersion() });
+    if (isMiseInstalledFn()) {
+        miseItems.push({ status: 'ok', label: 'mise', detail: getMiseVersionFn() });
     }
     else {
         miseItems.push({
@@ -96,32 +125,32 @@ function gatherDoctor() {
         sections.push({ title: 'Mise', items: miseItems });
         return sections;
     }
-    const globalConfigPath = miseGlobalConfigPath();
+    const globalConfigPath = miseGlobalConfigPathFn();
     let globalConfig = null;
-    if (fs.existsSync(globalConfigPath))
-        globalConfig = fs.readFileSync(globalConfigPath, 'utf-8');
+    if (existsSync(globalConfigPath))
+        globalConfig = readFileSync(globalConfigPath, 'utf-8');
     const shimsValue = globalConfig === null ? null : getShimsDirValue(globalConfig);
-    const expected = norm(shimsDir());
+    const expected = norm(shimsDirFn());
     if (shimsValue && norm(shimsValue) === expected) {
-        miseItems.push({ status: 'ok', label: 'shims_dir', detail: shimsDir() });
+        miseItems.push({ status: 'ok', label: 'shims_dir', detail: shimsDirFn() });
     }
     else {
         miseItems.push({
             status: 'fail',
             label: 'shims_dir',
-            detail: `not set to ${shimsDir()} in ${globalConfigPath} — run \`agentenv apply\``,
+            detail: `not set to ${shimsDirFn()} in ${globalConfigPath} — run \`agentenv apply\``,
         });
     }
     miseItems.push({
-        status: shimsDirOnPath() ? 'ok' : 'warn',
+        status: shimsDirOnPathFn() ? 'ok' : 'warn',
         label: 'shims on PATH',
-        detail: shimsDirOnPath()
-            ? shimsDir()
-            : `${shimsDir()} is not on PATH — add it so the shims resolve`,
+        detail: shimsDirOnPathFn()
+            ? shimsDirFn()
+            : `${shimsDirFn()} is not on PATH — add it so the shims resolve`,
     });
     sections.push({ title: 'Mise', items: miseItems });
     // Config
-    const configPath = findConfigPath();
+    const configPath = findConfigPathFn();
     if (!configPath) {
         sections.push({
             title: 'Config',
@@ -135,13 +164,13 @@ function gatherDoctor() {
         });
         return sections;
     }
-    const scope = norm(configPath) === norm(path.join(userConfigDir(), 'agentenv.toml')) ? 'user' : 'project';
+    const scope = norm(configPath) === norm(path.join(userConfigDirFn(), 'agentenv.toml')) ? 'user' : 'project';
     const configItems = [
         { status: 'ok', label: 'file', detail: `${configPath} (${scope} scope)` },
     ];
     let config;
     try {
-        config = loadConfig(configPath);
+        config = loadConfigFn(configPath, { layerUserConfig: true });
     }
     catch (error) {
         configItems.push({
@@ -163,31 +192,38 @@ function gatherDoctor() {
         configItems.push({ status: 'warn', label: 'warning', detail: warning });
     }
     sections.push({ title: 'Config', items: configItems });
-    // Tools
+    // Tools — the section (and its title, which needs no probing) is always
+    // present, but the actual mise probing (getInstalledToolState, one call
+    // per configured tool) only runs when this section could be selected —
+    // skipped entirely otherwise. A skipped section's items are never
+    // shown: --section always resolves by title, and a non-matching section's
+    // contents are discarded by filterDoctorSections below.
     const tools = config.tools ?? {};
     const enabledTools = TOOL_KEYS.filter((key) => tools[key] === true);
-    // Same verdict as apply's verify step: a tool apply itself skips (no mise
-    // fallback on this platform) or installs-but-needs-a-fresh-shell is never a
-    // doctor failure here, only a genuinely-missing one is.
-    const installedState = getInstalledToolState();
     const toolItems = [];
-    for (const key of enabledTools) {
-        const binary = BINARY_MAP[key];
-        const status = toolAvailabilityClassification(key, binary, installedState);
-        const item = { status: 'ok', label: `${binary} (${key})`, detail: '' };
-        if (status === 'needs-new-terminal') {
-            item.status = 'warn';
-            item.detail = 'installed via mise; open a new terminal';
+    if (wants('Tools')) {
+        // Same verdict as apply's verify step: a tool apply itself skips (no
+        // mise fallback on this platform) or installs-but-needs-a-fresh-shell is
+        // never a doctor failure here, only a genuinely-missing one is.
+        const installedState = getInstalledToolStateFn();
+        for (const key of enabledTools) {
+            const binary = BINARY_MAP[key];
+            const status = toolAvailabilityClassificationFn(key, binary, installedState);
+            const item = { status: 'ok', label: `${binary} (${key})`, detail: '' };
+            if (status === 'needs-new-terminal') {
+                item.status = 'warn';
+                item.detail = 'installed via mise; open a new terminal';
+            }
+            else if (status === 'manual') {
+                item.status = 'warn';
+                item.detail = 'not managed by mise; install manually';
+            }
+            else if (status === 'missing') {
+                item.status = 'fail';
+                item.detail = 'not on PATH — run `mise install` in this project';
+            }
+            toolItems.push(item);
         }
-        else if (status === 'manual') {
-            item.status = 'warn';
-            item.detail = 'not managed by mise; install manually';
-        }
-        else if (status === 'missing') {
-            item.status = 'fail';
-            item.detail = 'not on PATH — run `mise install` in this project';
-        }
-        toolItems.push(item);
     }
     sections.push({
         title: `Tools (${enabledTools.length} configured)`,
@@ -195,16 +231,62 @@ function gatherDoctor() {
             ? toolItems
             : [{ status: 'warn', label: 'none', detail: 'no tools enabled' }],
     });
-    // Agents
+    // RTK — every agent's hook depends on it, and RTK.md itself warns about a
+    // name collision with the unrelated "reachingforthejack/rtk" (Rust Type
+    // Kit), so this is worth its own check rather than folding into Tools.
+    // The section's presence still only depends on config, not on --section;
+    // only the rtk subprocess probing is skippable.
+    if (config.rtk?.enabled === true || tools.rtk === true) {
+        const rtkItems = [];
+        if (wants('RTK')) {
+            const rtkInfo = checkRtkInstallationFn(path.dirname(configPath));
+            if (!rtkInfo.resolvedPath) {
+                rtkItems.push({
+                    status: 'fail',
+                    label: 'rtk',
+                    detail: 'not found via `mise which rtk` or on PATH — run `agentenv apply`',
+                });
+            }
+            else {
+                rtkItems.push({ status: 'ok', label: 'rtk', detail: rtkInfo.resolvedPath });
+                const pinned = PINNED_TOOL_VERSIONS.rtk;
+                if (rtkInfo.version) {
+                    const detail = pinned && !rtkInfo.version.includes(pinned)
+                        ? `${rtkInfo.version} (agentenv pins ${pinned})`
+                        : rtkInfo.version;
+                    rtkItems.push({ status: 'ok', label: 'version', detail });
+                }
+                else {
+                    rtkItems.push({ status: 'warn', label: 'version', detail: '`rtk --version` failed' });
+                }
+                rtkItems.push({
+                    status: rtkInfo.gainOk ? 'ok' : 'fail',
+                    label: 'rtk gain',
+                    detail: rtkInfo.gainOk
+                        ? 'responds correctly'
+                        : "failed — this may be the unrelated 'reachingforthejack/rtk' (Rust Type Kit), not agentenv's rtk; see RTK.md",
+                });
+            }
+        }
+        sections.push({ title: 'RTK', items: rtkItems });
+    }
+    // Agents — the per-agent isAgentInstalled() probes (each a subprocess
+    // spawn) are skipped entirely when --section filters elsewhere;
+    // the section itself, and its cheap title (just enabled-agent count), are
+    // always present.
     const agents = getEnabledAgents(config);
     const agentItems = [];
-    for (const agent of agents) {
-        const installed = isAgentInstalled(agent);
-        agentItems.push({
-            status: installed ? 'ok' : 'warn',
-            label: `${agent} (${AGENT_COMMANDS[agent][0]})`,
-            detail: installed ? '' : 'CLI not found on PATH — install it or disable the agent in config',
-        });
+    if (wants('Agents')) {
+        for (const agent of agents) {
+            const installed = isAgentInstalledFn(agent);
+            agentItems.push({
+                status: installed ? 'ok' : 'warn',
+                label: `${agent} (${AGENT_COMMANDS[agent][0]})`,
+                detail: installed
+                    ? ''
+                    : 'CLI not found on PATH — install it or disable the agent in config',
+            });
+        }
     }
     sections.push({
         title: `Agents (${agents.length} enabled)`,
@@ -246,15 +328,16 @@ export const doctorCommand = new Command()
     .description('Diagnose the machine: mise, shims, config, tools and agents (read-only)')
     .option('--json', 'emit a machine-readable JSON document on stdout')
     .option('--section <index|name>', 'only run one report section (1-based section index or title prefix)')
-    .action((options) => {
+    .action((options, command) => {
     const json = options.json === true;
     if (json)
         setQuietEnabled(true);
-    const gathered = gatherDoctor();
+    const gathered = gatherDoctor(options.section);
     const sections = options.section === undefined ? gathered : filterDoctorSections(gathered, options.section);
     if (sections === undefined) {
-        console.error(theme.fail(`No doctor section matched "${options.section}". Sections: ${gathered.map((section, index) => `${index + 1}: ${section.title}`).join(', ')}`));
-        process.exitCode = 1;
+        // Invalid argument, not an operational failure — docs/guides/exit-codes.md
+        // reserves exit 2 for this across every command.
+        command.error(`No doctor section matched "${options.section}". Sections: ${gathered.map((section, index) => `${index + 1}: ${section.title}`).join(', ')}`);
         return;
     }
     const payload = doctorToJson(sections);

package/dist/commands/doctor.js.map

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package/dist/commands/setup.d.ts

@@ -19,6 +19,8 @@ export interface SaveAndApplyDeps {
     successMessage?: string;
     /** Epoch ms the whole command started, for the end-of-run timing line. */
     startedAt?: number;
+    /** Generate files only — no `mise install`, no verification. */
+    skipMiseInstall?: boolean;
 }
 /** Save the config and apply it, mirroring the shared setup tail. */
 export declare function saveAndApply(config: AgentenvConfig, file: string, deps?: SaveAndApplyDeps): Promise<void>;
@@ -34,6 +36,8 @@ interface SetupCommandOptions {
 export interface UnattendedSetupDeps extends SaveAndApplyDeps {
     misePrereqCheckDeps?: MisePrereqCheckDeps;
 }
+/** --scope only steers unattended (--yes) setup; the interactive wizard has no scope prompt yet. */
+export declare function interactiveScopeIgnoredWarning(scope: ScopeValue | undefined): string | undefined;
 /**
  * Unattended, single-command setup: `agentenv setup --yes`. Resolves the
  * configuration from, in priority order:

package/dist/commands/setup.d.ts.map

@@ -1 +1 @@
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+{"version":3,"file":"setup.d.ts","sourceRoot":"","sources":["../../src/commands/setup.ts"],"names":[],"mappings":"AAAA,OAAO,EAAE,OAAO,EAAE,MAAM,WAAW,CAAC;AAKpC,OAAO,KAAK,EAAY,cAAc,EAAE,MAAM,qBAAqB,CAAC;AAEpE,OAAO,KAAK,EAAE,UAAU,EAAE,MAAM,qBAAqB,CAAC;AACtD,OAAO,EAAE,kBAAkB,EAAE,MAAM,YAAY,CAAC;AAmBhD,UAAU,mBAAmB;IAC3B,WAAW,CAAC,EAAE,MAAM,OAAO,CAAC;IAC5B,OAAO,CAAC,EAAE,MAAM,MAAM,CAAC;CACxB;AAED;;;;GAIG;AACH,wBAAgB,eAAe,CAAC,IAAI,GAAE,mBAAwB,GAAG,OAAO,CAavE;AAED,MAAM,WAAW,gBAAgB;IAC/B,iEAAiE;IACjE,kBAAkB,CAAC,EAAE,OAAO,kBAAkB,CAAC;IAC/C,wEAAwE;IACxE,cAAc,CAAC,EAAE,MAAM,CAAC;IACxB,0EAA0E;IAC1E,SAAS,CAAC,EAAE,MAAM,CAAC;IACnB,gEAAgE;IAChE,eAAe,CAAC,EAAE,OAAO,CAAC;CAC3B;AAED,qEAAqE;AACrE,wBAAsB,YAAY,CAChC,MAAM,EAAE,cAAc,EACtB,IAAI,EAAE,MAAM,EACZ,IAAI,GAAE,gBAAqB,GAC1B,OAAO,CAAC,IAAI,CAAC,CAoCf;AAED,UAAU,mBAAmB;IAC3B,GAAG,CAAC,EAAE,OAAO,CAAC;IACd,MAAM,CAAC,EAAE,MAAM,CAAC;IAChB,KAAK,CAAC,EAAE,UAAU,CAAC;IACnB,KAAK,CAAC,EAAE,OAAO,CAAC;IAChB,GAAG,CAAC,EAAE,OAAO,CAAC;IACd,MAAM,CAAC,EAAE,MAAM,CAAC;IAChB,WAAW,CAAC,EAAE,MAAM,GAAG,OAAO,CAAC;CAChC;AAED,MAAM,WAAW,mBAAoB,SAAQ,gBAAgB;IAC3D,mBAAmB,CAAC,EAAE,mBAAmB,CAAC;CAC3C;AAeD,oGAAoG;AACpG,wBAAgB,8BAA8B,CAAC,KAAK,EAAE,UAAU,GAAG,SAAS,GAAG,MAAM,GAAG,SAAS,CAMhG;AAaD;;;;;;;GAOG;AACH,wBAAsB,eAAe,CACnC,OAAO,EAAE,mBAAmB,EAC5B,IAAI,GAAE,mBAAwB,GAC7B,OAAO,CAAC,IAAI,CAAC,CA8Gf;AAED,eAAO,MAAM,YAAY,SA6BrB,CAAC"}

package/dist/commands/setup.js

@@ -1,8 +1,9 @@
 import { Command } from 'commander';
 import * as fs from 'fs';
+import * as path from 'path';
 import { detectInstalledAgents } from '../adapters/detect.js';
 import { loadConfig, saveConfig, validateConfig } from '../config/schema.js';
-import { configFilePath, findConfigPath, parseScopeFlag, resolveScopeDir, } from '../config/scopes.js';
+import { configFilePath, findConfigPath, parseScopeFlag } from '../config/scopes.js';
 import { applyConfiguration } from './apply.js';
 import { runConfigWizard } from './wizard.js';
 import { AGENT_OPTIONS, buildDefaultSimpleConfig, parseAgentsInput } from '../wizard/build.js';
@@ -40,10 +41,15 @@ export async function saveAndApply(config, file, deps = {}) {
     saveConfig(config, file);
     console.log(`Saved configuration: ${file}\n`);
     const apply = deps.applyConfiguration ?? applyConfiguration;
+    // `file` is always the actual agentenv.toml being applied — including when
+    // findConfigPath()'s upward search (FEAT-05) found it in an ancestor
+    // directory — so its own directory is the base dir, not a re-derivation
+    // from config.scope that assumes cwd for "project".
     const result = await withSpinner('Applying configuration...', (spinner) => 
     // setup already printed the prereq line above, so tell apply not to repeat it.
-    apply(config, resolveScopeDir(config.scope ?? 'project'), {
+    apply(config, path.dirname(file), {
         skipPrereqMessage: true,
+        skipMiseInstall: deps.skipMiseInstall,
         onMiseInstall: {
             onStart: () => {
                 spinner.stop();
@@ -62,6 +68,34 @@ export async function saveAndApply(config, file, deps = {}) {
     }
     printResult('ok', deps.successMessage ?? 'Setup complete!', undefined, elapsedMs);
 }
+/**
+ * `--agents`/`--superpowers` only take effect when unattendedSetup builds a
+ * fresh default config; reusing an existing agentenv.toml (the common case)
+ * applies it as-is, silently dropping whatever the caller typed unless we
+ * say so here.
+ */
+function ignoredUnattendedFlags(options) {
+    const ignored = [];
+    if (options.agents !== undefined)
+        ignored.push('--agents');
+    if (options.superpowers !== undefined)
+        ignored.push('--superpowers');
+    return ignored;
+}
+/** --scope only steers unattended (--yes) setup; the interactive wizard has no scope prompt yet. */
+export function interactiveScopeIgnoredWarning(scope) {
+    if (scope === undefined)
+        return undefined;
+    return (`--scope is ignored by the interactive wizard (only --yes uses it); ` +
+        `run \`agentenv setup --yes --scope ${scope}\` for unattended setup at that scope.`);
+}
+function warnIgnoredFlags(options, file) {
+    const ignored = ignoredUnattendedFlags(options);
+    if (ignored.length === 0)
+        return;
+    console.warn(theme.warn(`Note: reusing the existing config at ${file}; ignoring ${ignored.join(', ')} ` +
+        `(edit the file directly to change ${ignored.length === 1 ? 'it' : 'them'}).`));
+}
 /**
  * Unattended, single-command setup: `agentenv setup --yes`. Resolves the
  * configuration from, in priority order:
@@ -82,7 +116,7 @@ export async function unattendedSetup(options, deps = {}) {
     let file;
     if (options.config) {
         try {
-            config = loadConfig(options.config);
+            config = loadConfig(options.config, { layerUserConfig: true });
         }
         catch (error) {
             console.error(theme.fail(error instanceof Error ? error.message : String(error)));
@@ -102,12 +136,20 @@ export async function unattendedSetup(options, deps = {}) {
         file = configFilePath(scope);
         if (fs.existsSync(file)) {
             printConfigPath(file);
-            config = loadConfig(file);
+            try {
+                config = loadConfig(file, { layerUserConfig: true });
+            }
+            catch (error) {
+                console.error(theme.fail(error instanceof Error ? error.message : String(error)));
+                process.exitCode = 1;
+                return;
+            }
             const report = validateConfig(config);
             if (!reportValidation(report, 'Configuration invalid — not applying.')) {
                 process.exitCode = 1;
                 return;
             }
+            warnIgnoredFlags(options, file);
         }
         else if (options.scope === undefined) {
             // No config at the preferred scope and the user didn't ask for a
@@ -117,12 +159,20 @@ export async function unattendedSetup(options, deps = {}) {
             if (nearest) {
                 printConfigPath(nearest);
                 file = nearest;
-                config = loadConfig(nearest);
+                try {
+                    config = loadConfig(nearest, { layerUserConfig: true });
+                }
+                catch (error) {
+                    console.error(theme.fail(error instanceof Error ? error.message : String(error)));
+                    process.exitCode = 1;
+                    return;
+                }
                 const report = validateConfig(config);
                 if (!reportValidation(report, 'Configuration invalid — not applying.')) {
                     process.exitCode = 1;
                     return;
                 }
+                warnIgnoredFlags(options, file);
             }
         }
         if (config === undefined) {
@@ -180,6 +230,9 @@ export const setupCommand = new Command()
         await unattendedSetup({ ...options, scope: scope.scope });
         return;
     }
+    const scopeWarning = interactiveScopeIgnoredWarning(scope.scope);
+    if (scopeWarning)
+        console.warn(theme.warn(scopeWarning));
     await runConfigWizard();
 });
 //# sourceMappingURL=setup.js.map

package/dist/commands/setup.js.map

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package/dist/commands/status.d.ts.map

@@ -1 +1 @@
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