@indy2kro/agentenv 0.4.0 → 0.5.0

package/dist/adapters/opencode.d.ts.map

@@ -1 +1 @@
-{"version":3,"file":"opencode.d.ts","sourceRoot":"","sources":["../../src/adapters/opencode.ts"],"names":[],"mappings":"AAAA;;;;;GAKG;AAIH,OAAO,EAAE,WAAW,EAAE,aAAa,EAAE,aAAa,EAAE,MAAM,WAAW,CAAC;AAItE,qBAAa,eAAgB,SAAQ,WAAW;IAC9C,OAAO,CAAC,SAAS,CAAS;gBAEd,MAAM,EAAE,aAAa;IAMjC,OAAO,IAAI,MAAM;IAIjB,YAAY,IAAI,MAAM;IAItB,WAAW,IAAI,OAAO;IAIhB,UAAU,IAAI,OAAO,CAAC,aAAa,CAAC;IAgCpC,cAAc,IAAI,OAAO,CAAC,aAAa,CAAC;IAkCxC,OAAO,IAAI,OAAO,CAAC,aAAa,CAAC;IAWvC,UAAU,IAAI,MAAM,CAAC,MAAM,EAAE,MAAM,CAAC;CASrC"}
+{"version":3,"file":"opencode.d.ts","sourceRoot":"","sources":["../../src/adapters/opencode.ts"],"names":[],"mappings":"AAAA;;;;;GAKG;AAIH,OAAO,EAAE,WAAW,EAAE,aAAa,EAAE,aAAa,EAAE,MAAM,WAAW,CAAC;AAItE,qBAAa,eAAgB,SAAQ,WAAW;IAC9C,OAAO,CAAC,SAAS,CAAS;gBAEd,MAAM,EAAE,aAAa;IAMjC,OAAO,IAAI,MAAM;IAIjB,YAAY,IAAI,MAAM;IAItB,WAAW,IAAI,OAAO;IAIhB,UAAU,IAAI,OAAO,CAAC,aAAa,CAAC;IAgCpC,cAAc,IAAI,OAAO,CAAC,aAAa,CAAC;IA+BxC,OAAO,IAAI,OAAO,CAAC,aAAa,CAAC;IAWvC,UAAU,IAAI,MAAM,CAAC,MAAM,EAAE,MAAM,CAAC;CASrC"}

package/dist/adapters/opencode.js

@@ -71,14 +71,11 @@ export class OpenCodeAdapter extends BaseAdapter {
         const existed = fs.existsSync(pluginPath);
         const run = resolveRtkInit(this.config.rtkInit)(flags, this.config.baseDir);
         if (run.success) {
-            if (run.stdout.includes('already up to date')) {
-                result.message = 'OpenCode rtk plugin already up to date';
-            }
-            else {
-                if (!existed && fs.existsSync(pluginPath))
-                    result.filesCreated.push(pluginPath);
-                result.message = rtkMessage(run);
-            }
+            if (!existed && fs.existsSync(pluginPath))
+                result.filesCreated.push(pluginPath);
+            else if (existed)
+                result.filesModified.push(pluginPath);
+            result.message = rtkMessage(run);
         }
         else {
             result.success = false;

package/dist/adapters/opencode.js.map

@@ -1 +1 @@
-{"version":3,"file":"opencode.js","sourceRoot":"","sources":["../../src/adapters/opencode.ts"],"names":[],"mappings":"AAAA;;;;;GAKG;AAEH,OAAO,KAAK,EAAE,MAAM,IAAI,CAAC;AACzB,OAAO,KAAK,IAAI,MAAM,MAAM,CAAC;AAC7B,OAAO,EAAE,WAAW,EAAgC,MAAM,WAAW,CAAC;AACtE,OAAO,EAAE,gBAAgB,EAAE,MAAM,aAAa,CAAC;AAC/C,OAAO,EAAE,cAAc,EAAE,cAAc,EAAE,UAAU,EAAE,MAAM,qBAAqB,CAAC;AAEjF,MAAM,OAAO,eAAgB,SAAQ,WAAW;IAG9C,YAAY,MAAqB;QAC/B,KAAK,CAAC,MAAM,CAAC,CAAC;QACd,MAAM,IAAI,GAAG,OAAO,CAAC,GAAG,CAAC,IAAI,IAAI,OAAO,CAAC,GAAG,CAAC,WAAW,IAAI,EAAE,CAAC;QAC/D,IAAI,CAAC,SAAS,GAAG,IAAI,CAAC,IAAI,CAAC,IAAI,EAAE,SAAS,EAAE,UAAU,CAAC,CAAC;IAC1D,CAAC;IAED,OAAO;QACL,OAAO,UAAU,CAAC;IACpB,CAAC;IAED,YAAY;QACV,OAAO,IAAI,CAAC,SAAS,CAAC;IACxB,CAAC;IAED,WAAW;QACT,OAAO,gBAAgB,CAAC,UAAU,CAAC,CAAC;IACtC,CAAC;IAED,KAAK,CAAC,UAAU;QACd,MAAM,MAAM,GAAkB;YAC5B,OAAO,EAAE,IAAI;YACb,OAAO,EAAE,EAAE;YACX,YAAY,EAAE,EAAE;YAChB,aAAa,EAAE,EAAE;YACjB,MAAM,EAAE,EAAE;SACX,CAAC;QAEF,IAAI,CAAC,IAAI,CAAC,MAAM,CAAC,OAAO,EAAE,CAAC;YACzB,MAAM,CAAC,OAAO,GAAG,8BAA8B,CAAC;YAChD,OAAO,MAAM,CAAC;QAChB,CAAC;QAED,6EAA6E;QAC7E,IAAI,IAAI,CAAC,MAAM,CAAC,UAAU,EAAE,CAAC;YAC3B,MAAM,UAAU,GAAG,MAAM,IAAI,CAAC,cAAc,EAAE,CAAC;YAC/C,IAAI,UAAU,CAAC,OAAO,EAAE,CAAC;gBACvB,MAAM,CAAC,YAAY,CAAC,IAAI,CAAC,GAAG,UAAU,CAAC,YAAY,CAAC,CAAC;gBACrD,MAAM,CAAC,aAAa,CAAC,IAAI,CAAC,GAAG,UAAU,CAAC,aAAa,CAAC,CAAC;gBACvD,MAAM,CAAC,OAAO,GAAG,UAAU,CAAC,OAAO,CAAC;YACtC,CAAC;iBAAM,CAAC;gBACN,MAAM,CAAC,OAAO,GAAG,KAAK,CAAC;gBACvB,MAAM,CAAC,MAAM,CAAC,IAAI,CAAC,GAAG,UAAU,CAAC,MAAM,CAAC,CAAC;YAC3C,CAAC;QACH,CAAC;aAAM,CAAC;YACN,MAAM,CAAC,OAAO,GAAG,6CAA6C,CAAC;QACjE,CAAC;QAED,OAAO,MAAM,CAAC;IAChB,CAAC;IAED,KAAK,CAAC,cAAc;QAClB,MAAM,MAAM,GAAkB;YAC5B,OAAO,EAAE,IAAI;YACb,OAAO,EAAE,EAAE;YACX,YAAY,EAAE,EAAE;YAChB,aAAa,EAAE,EAAE;YACjB,MAAM,EAAE,EAAE;SACX,CAAC;QAEF,IAAI,CAAC,IAAI,CAAC,MAAM,CAAC,OAAO,EAAE,CAAC;YACzB,MAAM,CAAC,OAAO,GAAG,8BAA8B,CAAC;YAChD,OAAO,MAAM,CAAC;QAChB,CAAC;QAED,MAAM,KAAK,GAAG,cAAc,CAAC,QAAQ,CAAC;QACtC,MAAM,UAAU,GAAG,IAAI,CAAC,IAAI,CAAC,IAAI,CAAC,SAAS,EAAE,SAAS,EAAE,QAAQ,CAAC,CAAC;QAClE,MAAM,OAAO,GAAG,EAAE,CAAC,UAAU,CAAC,UAAU,CAAC,CAAC;QAE1C,MAAM,GAAG,GAAG,cAAc,CAAC,IAAI,CAAC,MAAM,CAAC,OAAO,CAAC,CAAC,KAAK,EAAE,IAAI,CAAC,MAAM,CAAC,OAAO,CAAC,CAAC;QAC5E,IAAI,GAAG,CAAC,OAAO,EAAE,CAAC;YAChB,IAAI,GAAG,CAAC,MAAM,CAAC,QAAQ,CAAC,oBAAoB,CAAC,EAAE,CAAC;gBAC9C,MAAM,CAAC,OAAO,GAAG,wCAAwC,CAAC;YAC5D,CAAC;iBAAM,CAAC;gBACN,IAAI,CAAC,OAAO,IAAI,EAAE,CAAC,UAAU,CAAC,UAAU,CAAC;oBAAE,MAAM,CAAC,YAAY,CAAC,IAAI,CAAC,UAAU,CAAC,CAAC;gBAChF,MAAM,CAAC,OAAO,GAAG,UAAU,CAAC,GAAG,CAAC,CAAC;YACnC,CAAC;QACH,CAAC;aAAM,CAAC;YACN,MAAM,CAAC,OAAO,GAAG,KAAK,CAAC;YACvB,MAAM,CAAC,MAAM,CAAC,IAAI,CAAC,GAAG,CAAC,OAAO,GAAG,CAAC,GAAG,CAAC,MAAM,CAAC,CAAC,CAAC,KAAK,GAAG,CAAC,MAAM,CAAC,IAAI,EAAE,EAAE,CAAC,CAAC,CAAC,EAAE,CAAC,CAAC,CAAC;QACjF,CAAC;QAED,OAAO,MAAM,CAAC;IAChB,CAAC;IAED,KAAK,CAAC,OAAO;QACX,iEAAiE;QACjE,OAAO;YACL,OAAO,EAAE,IAAI;YACb,OAAO,EAAE,6BAA6B;YACtC,YAAY,EAAE,EAAE;YAChB,aAAa,EAAE,EAAE;YACjB,MAAM,EAAE,EAAE;SACX,CAAC;IACJ,CAAC;IAED,UAAU;QACR,MAAM,GAAG,GAA2B,EAAE,CAAC;QAEvC,IAAI,OAAO,CAAC,QAAQ,KAAK,OAAO,IAAI,IAAI,CAAC,MAAM,CAAC,UAAU,EAAE,CAAC;YAC3D,GAAG,CAAC,KAAK,GAAG,UAAU,CAAC;QACzB,CAAC;QAED,OAAO,GAAG,CAAC;IACb,CAAC;CACF"}
+{"version":3,"file":"opencode.js","sourceRoot":"","sources":["../../src/adapters/opencode.ts"],"names":[],"mappings":"AAAA;;;;;GAKG;AAEH,OAAO,KAAK,EAAE,MAAM,IAAI,CAAC;AACzB,OAAO,KAAK,IAAI,MAAM,MAAM,CAAC;AAC7B,OAAO,EAAE,WAAW,EAAgC,MAAM,WAAW,CAAC;AACtE,OAAO,EAAE,gBAAgB,EAAE,MAAM,aAAa,CAAC;AAC/C,OAAO,EAAE,cAAc,EAAE,cAAc,EAAE,UAAU,EAAE,MAAM,qBAAqB,CAAC;AAEjF,MAAM,OAAO,eAAgB,SAAQ,WAAW;IAG9C,YAAY,MAAqB;QAC/B,KAAK,CAAC,MAAM,CAAC,CAAC;QACd,MAAM,IAAI,GAAG,OAAO,CAAC,GAAG,CAAC,IAAI,IAAI,OAAO,CAAC,GAAG,CAAC,WAAW,IAAI,EAAE,CAAC;QAC/D,IAAI,CAAC,SAAS,GAAG,IAAI,CAAC,IAAI,CAAC,IAAI,EAAE,SAAS,EAAE,UAAU,CAAC,CAAC;IAC1D,CAAC;IAED,OAAO;QACL,OAAO,UAAU,CAAC;IACpB,CAAC;IAED,YAAY;QACV,OAAO,IAAI,CAAC,SAAS,CAAC;IACxB,CAAC;IAED,WAAW;QACT,OAAO,gBAAgB,CAAC,UAAU,CAAC,CAAC;IACtC,CAAC;IAED,KAAK,CAAC,UAAU;QACd,MAAM,MAAM,GAAkB;YAC5B,OAAO,EAAE,IAAI;YACb,OAAO,EAAE,EAAE;YACX,YAAY,EAAE,EAAE;YAChB,aAAa,EAAE,EAAE;YACjB,MAAM,EAAE,EAAE;SACX,CAAC;QAEF,IAAI,CAAC,IAAI,CAAC,MAAM,CAAC,OAAO,EAAE,CAAC;YACzB,MAAM,CAAC,OAAO,GAAG,8BAA8B,CAAC;YAChD,OAAO,MAAM,CAAC;QAChB,CAAC;QAED,6EAA6E;QAC7E,IAAI,IAAI,CAAC,MAAM,CAAC,UAAU,EAAE,CAAC;YAC3B,MAAM,UAAU,GAAG,MAAM,IAAI,CAAC,cAAc,EAAE,CAAC;YAC/C,IAAI,UAAU,CAAC,OAAO,EAAE,CAAC;gBACvB,MAAM,CAAC,YAAY,CAAC,IAAI,CAAC,GAAG,UAAU,CAAC,YAAY,CAAC,CAAC;gBACrD,MAAM,CAAC,aAAa,CAAC,IAAI,CAAC,GAAG,UAAU,CAAC,aAAa,CAAC,CAAC;gBACvD,MAAM,CAAC,OAAO,GAAG,UAAU,CAAC,OAAO,CAAC;YACtC,CAAC;iBAAM,CAAC;gBACN,MAAM,CAAC,OAAO,GAAG,KAAK,CAAC;gBACvB,MAAM,CAAC,MAAM,CAAC,IAAI,CAAC,GAAG,UAAU,CAAC,MAAM,CAAC,CAAC;YAC3C,CAAC;QACH,CAAC;aAAM,CAAC;YACN,MAAM,CAAC,OAAO,GAAG,6CAA6C,CAAC;QACjE,CAAC;QAED,OAAO,MAAM,CAAC;IAChB,CAAC;IAED,KAAK,CAAC,cAAc;QAClB,MAAM,MAAM,GAAkB;YAC5B,OAAO,EAAE,IAAI;YACb,OAAO,EAAE,EAAE;YACX,YAAY,EAAE,EAAE;YAChB,aAAa,EAAE,EAAE;YACjB,MAAM,EAAE,EAAE;SACX,CAAC;QAEF,IAAI,CAAC,IAAI,CAAC,MAAM,CAAC,OAAO,EAAE,CAAC;YACzB,MAAM,CAAC,OAAO,GAAG,8BAA8B,CAAC;YAChD,OAAO,MAAM,CAAC;QAChB,CAAC;QAED,MAAM,KAAK,GAAG,cAAc,CAAC,QAAQ,CAAC;QACtC,MAAM,UAAU,GAAG,IAAI,CAAC,IAAI,CAAC,IAAI,CAAC,SAAS,EAAE,SAAS,EAAE,QAAQ,CAAC,CAAC;QAClE,MAAM,OAAO,GAAG,EAAE,CAAC,UAAU,CAAC,UAAU,CAAC,CAAC;QAE1C,MAAM,GAAG,GAAG,cAAc,CAAC,IAAI,CAAC,MAAM,CAAC,OAAO,CAAC,CAAC,KAAK,EAAE,IAAI,CAAC,MAAM,CAAC,OAAO,CAAC,CAAC;QAC5E,IAAI,GAAG,CAAC,OAAO,EAAE,CAAC;YAChB,IAAI,CAAC,OAAO,IAAI,EAAE,CAAC,UAAU,CAAC,UAAU,CAAC;gBAAE,MAAM,CAAC,YAAY,CAAC,IAAI,CAAC,UAAU,CAAC,CAAC;iBAC3E,IAAI,OAAO;gBAAE,MAAM,CAAC,aAAa,CAAC,IAAI,CAAC,UAAU,CAAC,CAAC;YACxD,MAAM,CAAC,OAAO,GAAG,UAAU,CAAC,GAAG,CAAC,CAAC;QACnC,CAAC;aAAM,CAAC;YACN,MAAM,CAAC,OAAO,GAAG,KAAK,CAAC;YACvB,MAAM,CAAC,MAAM,CAAC,IAAI,CAAC,GAAG,CAAC,OAAO,GAAG,CAAC,GAAG,CAAC,MAAM,CAAC,CAAC,CAAC,KAAK,GAAG,CAAC,MAAM,CAAC,IAAI,EAAE,EAAE,CAAC,CAAC,CAAC,EAAE,CAAC,CAAC,CAAC;QACjF,CAAC;QAED,OAAO,MAAM,CAAC;IAChB,CAAC;IAED,KAAK,CAAC,OAAO;QACX,iEAAiE;QACjE,OAAO;YACL,OAAO,EAAE,IAAI;YACb,OAAO,EAAE,6BAA6B;YACtC,YAAY,EAAE,EAAE;YAChB,aAAa,EAAE,EAAE;YACjB,MAAM,EAAE,EAAE;SACX,CAAC;IACJ,CAAC;IAED,UAAU;QACR,MAAM,GAAG,GAA2B,EAAE,CAAC;QAEvC,IAAI,OAAO,CAAC,QAAQ,KAAK,OAAO,IAAI,IAAI,CAAC,MAAM,CAAC,UAAU,EAAE,CAAC;YAC3D,GAAG,CAAC,KAAK,GAAG,UAAU,CAAC;QACzB,CAAC;QAED,OAAO,GAAG,CAAC;IACb,CAAC;CACF"}

package/dist/commands/apply.d.ts

@@ -1,6 +1,7 @@
 import { Command } from 'commander';
 import type { AgentenvConfig } from '../config/schema.js';
 import type { SuperpowersAdapterDeps } from '../integrations/index.js';
+import type { GeneratedFile } from '../generate/agentsmd.js';
 import type { RtkInitFn } from '../toolchain/rtk.js';
 export interface ApplyResult {
     success: boolean;
@@ -37,6 +38,13 @@ export interface ApplyOptions {
         onEnd?: () => void;
     };
 }
+/**
+ * For user/global scope the instruction files are written into each enabled
+ * agent's own user-level instruction file (e.g. ~/.claude/CLAUDE.md for
+ * Claude Code) instead of only the baseDir copies, which no agent reads.
+ * Returns the per-agent files for the scope; empty for project scope.
+ */
+export declare function userScopeInstructionFiles(config: AgentenvConfig, baseDir: string, options: ApplyOptions): GeneratedFile[];
 /** Apply a validated configuration and return structured results for the CLI. */
 export declare function applyConfiguration(config: AgentenvConfig, baseDir: string, options?: ApplyOptions): Promise<ApplyResult>;
 export declare const applyCommand: Command;

package/dist/commands/apply.d.ts.map

@@ -1 +1 @@
-{"version":3,"file":"apply.d.ts","sourceRoot":"","sources":["../../src/commands/apply.ts"],"names":[],"mappings":"AAAA,OAAO,EAAE,OAAO,EAAE,MAAM,WAAW,CAAC;AAkBpC,OAAO,KAAK,EAAE,cAAc,EAAE,MAAM,qBAAqB,CAAC;AAE1D,OAAO,KAAK,EAAE,sBAAsB,EAAE,MAAM,0BAA0B,CAAC;AAGvE,OAAO,KAAK,EAAE,SAAS,EAAE,MAAM,qBAAqB,CAAC;AA2BrD,MAAM,WAAW,WAAW;IAC1B,OAAO,EAAE,OAAO,CAAC;IACjB,QAAQ,EAAE,MAAM,EAAE,CAAC;IACnB,MAAM,EAAE,MAAM,EAAE,CAAC;IACjB,8EAA8E;IAC9E,SAAS,CAAC,EAAE,MAAM,CAAC;CACpB;AAED,MAAM,WAAW,YAAY;IAC3B;;;OAGG;IACH,eAAe,CAAC,EAAE,OAAO,CAAC;IAC1B;;;;OAIG;IACH,iBAAiB,CAAC,EAAE,OAAO,CAAC;IAC5B,wDAAwD;IACxD,OAAO,CAAC,EAAE,SAAS,CAAC;IACpB,8EAA8E;IAC9E,eAAe,CAAC,EAAE,sBAAsB,CAAC;IACzC;;;;;OAKG;IACH,aAAa,CAAC,EAAE;QACd,OAAO,CAAC,EAAE,MAAM,IAAI,CAAC;QACrB,QAAQ,CAAC,EAAE,CAAC,KAAK,EAAE,MAAM,EAAE,MAAM,EAAE,QAAQ,GAAG,QAAQ,KAAK,IAAI,CAAC;QAChE,KAAK,CAAC,EAAE,MAAM,IAAI,CAAC;KACpB,CAAC;CACH;AAmCD,iFAAiF;AACjF,wBAAsB,kBAAkB,CACtC,MAAM,EAAE,cAAc,EACtB,OAAO,EAAE,MAAM,EACf,OAAO,GAAE,YAAiB,GACzB,OAAO,CAAC,WAAW,CAAC,CA2HtB;AAED,eAAO,MAAM,YAAY,SAuErB,CAAC"}
+{"version":3,"file":"apply.d.ts","sourceRoot":"","sources":["../../src/commands/apply.ts"],"names":[],"mappings":"AAAA,OAAO,EAAE,OAAO,EAAE,MAAM,WAAW,CAAC;AAkBpC,OAAO,KAAK,EAAE,cAAc,EAAE,MAAM,qBAAqB,CAAC;AAE1D,OAAO,KAAK,EAAE,sBAAsB,EAAE,MAAM,0BAA0B,CAAC;AAMvE,OAAO,KAAK,EAAE,aAAa,EAAE,MAAM,yBAAyB,CAAC;AAE7D,OAAO,KAAK,EAAE,SAAS,EAAE,MAAM,qBAAqB,CAAC;AA2BrD,MAAM,WAAW,WAAW;IAC1B,OAAO,EAAE,OAAO,CAAC;IACjB,QAAQ,EAAE,MAAM,EAAE,CAAC;IACnB,MAAM,EAAE,MAAM,EAAE,CAAC;IACjB,8EAA8E;IAC9E,SAAS,CAAC,EAAE,MAAM,CAAC;CACpB;AAED,MAAM,WAAW,YAAY;IAC3B;;;OAGG;IACH,eAAe,CAAC,EAAE,OAAO,CAAC;IAC1B;;;;OAIG;IACH,iBAAiB,CAAC,EAAE,OAAO,CAAC;IAC5B,wDAAwD;IACxD,OAAO,CAAC,EAAE,SAAS,CAAC;IACpB,8EAA8E;IAC9E,eAAe,CAAC,EAAE,sBAAsB,CAAC;IACzC;;;;;OAKG;IACH,aAAa,CAAC,EAAE;QACd,OAAO,CAAC,EAAE,MAAM,IAAI,CAAC;QACrB,QAAQ,CAAC,EAAE,CAAC,KAAK,EAAE,MAAM,EAAE,MAAM,EAAE,QAAQ,GAAG,QAAQ,KAAK,IAAI,CAAC;QAChE,KAAK,CAAC,EAAE,MAAM,IAAI,CAAC;KACpB,CAAC;CACH;AAmCD;;;;;GAKG;AACH,wBAAgB,yBAAyB,CACvC,MAAM,EAAE,cAAc,EACtB,OAAO,EAAE,MAAM,EACf,OAAO,EAAE,YAAY,GACpB,aAAa,EAAE,CAOjB;AAED,iFAAiF;AACjF,wBAAsB,kBAAkB,CACtC,MAAM,EAAE,cAAc,EACtB,OAAO,EAAE,MAAM,EACf,OAAO,GAAE,YAAiB,GACzB,OAAO,CAAC,WAAW,CAAC,CA8HtB;AAED,eAAO,MAAM,YAAY,SA+ErB,CAAC"}

package/dist/commands/apply.js

@@ -3,9 +3,9 @@ import * as path from 'path';
 import { ClaudeCodeAdapter, CodexCliAdapter, CopilotAdapter, OpenCodeAdapter, GeminiCliAdapter, CursorAdapter, WindsurfAdapter, ClineAdapter, VibeAdapter, } from '../adapters/index.js';
 import { getEnabledAgents, loadConfig, validateConfig } from '../config/schema.js';
 import { resolveScopeDir } from '../config/scopes.js';
-import { configFilePath, findConfigPath } from '../config/scopes.js';
+import { findConfigPath } from '../config/scopes.js';
 import { SuperpowersAdapter, integrationResultLines } from '../integrations/index.js';
-import { generateInstructionFiles, updateWithMarkers } from '../generate/agentsmd.js';
+import { generateAgentsMd, generateInstructionFiles, updateWithMarkers, } from '../generate/agentsmd.js';
 import { fixShellConfiguration } from '../shell/detector.js';
 import { isUnsupportedRtkAgentError } from '../toolchain/rtk.js';
 import { ensureGlobalShimsDir, eulaPreflightHint, generateMiseToml, isMiseInstalled, miseActivationHint, miseInstallInstructions, miseInstallOutcome, platformUnsupportedHint, prereqMessage, runMiseInstall, saveMiseToml, toolAvailabilityLine, trustMiseToml, verifyHintNeeded, verifySummaryLine, verifyToolAvailability, } from '../toolchain/mise.js';
@@ -50,6 +50,21 @@ function enabledIntegrations(config, options) {
     }
     return adapters;
 }
+/**
+ * For user/global scope the instruction files are written into each enabled
+ * agent's own user-level instruction file (e.g. ~/.claude/CLAUDE.md for
+ * Claude Code) instead of only the baseDir copies, which no agent reads.
+ * Returns the per-agent files for the scope; empty for project scope.
+ */
+export function userScopeInstructionFiles(config, baseDir, options) {
+    if (config.scope !== 'user')
+        return [];
+    const content = generateAgentsMd(config);
+    return adaptersFor(config, baseDir, options).map((adapter) => ({
+        path: adapter.getUserInstructionFile(),
+        content,
+    }));
+}
 /** Apply a validated configuration and return structured results for the CLI. */
 export async function applyConfiguration(config, baseDir, options = {}) {
     const startedAt = Date.now();
@@ -133,7 +148,10 @@ export async function applyConfiguration(config, baseDir, options = {}) {
     // Step 4 — instruction files for the agents.
     const markerStart = config.generate?.marker_start ?? '<!-- agentenv-managed-start -->';
     const markerEnd = config.generate?.marker_end ?? '<!-- agentenv-managed-end -->';
-    for (const file of generateInstructionFiles(config, baseDir)) {
+    for (const file of [
+        ...generateInstructionFiles(config, baseDir),
+        ...userScopeInstructionFiles(config, baseDir, options),
+    ]) {
         const update = updateWithMarkers(file.path, file.content, markerStart, markerEnd);
         (update.success ? messages : errors).push(update.message);
     }
@@ -174,15 +192,20 @@ export const applyCommand = new Command()
     renderLogo();
     const dryRun = options.dryRun === true;
     let config;
+    const configPath = findConfigPath();
+    if (!configPath) {
+        console.error('No agentenv.toml found. Run `agentenv setup` first.');
+        process.exitCode = 1;
+        return;
+    }
     try {
-        config = loadConfig();
+        config = loadConfig(configPath);
     }
     catch (error) {
         console.error(theme.fail(error instanceof Error ? error.message : String(error)));
         process.exitCode = 1;
         return;
     }
-    const configPath = findConfigPath() ?? configFilePath(config.scope ?? 'project');
     printConfigPath(configPath);
     const report = validateConfig(config);
     if (!reportValidation(report, 'Configuration invalid — not applying.')) {
@@ -192,7 +215,10 @@ export const applyCommand = new Command()
     const baseDir = resolveScopeDir(config.scope);
     if (dryRun) {
         const enabledToolCount = Object.values(config.tools ?? {}).filter((on) => on === true).length;
-        const files = generateInstructionFiles(config, baseDir);
+        const files = [
+            ...generateInstructionFiles(config, baseDir),
+            ...userScopeInstructionFiles(config, baseDir, options),
+        ];
         const agents = [...getEnabledAgents(config)];
         const integrations = enabledIntegrations(config, options);
         console.log(`  Tools:          ${enabledToolCount} enabled -> ${path.join(baseDir, 'mise.toml')}`);

package/dist/commands/apply.js.map

@@ -1 +1 @@
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package/dist/commands/completion.d.ts.map

@@ -1 +1 @@
-{"version":3,"file":"completion.d.ts","sourceRoot":"","sources":["../../src/commands/completion.ts"],"names":[],"mappings":"AAAA;;;;;;GAMG;AAEH,OAAO,EAAY,OAAO,EAAE,MAAM,WAAW,CAAC;AAE9C,eAAO,MAAM,iBAAiB,gDAAiD,CAAC;AAChF,MAAM,MAAM,eAAe,GAAG,CAAC,OAAO,iBAAiB,CAAC,CAAC,MAAM,CAAC,CAAC;AAKjE,MAAM,WAAW,sBAAsB;IACrC,IAAI,EAAE,MAAM,CAAC;IACb,OAAO,EAAE,MAAM,EAAE,CAAC;IAClB,WAAW,EAAE,MAAM,CAAC;IACpB,uEAAuE;IACvE,KAAK,EAAE,MAAM,EAAE,CAAC;CACjB;AAED,MAAM,WAAW,eAAe;IAC9B,OAAO,EAAE,MAAM,CAAC;IAChB,WAAW,EAAE,MAAM,EAAE,CAAC;IACtB,QAAQ,EAAE,sBAAsB,EAAE,CAAC;CACpC;AAeD,wBAAgB,oBAAoB,CAAC,IAAI,EAAE,OAAO,GAAG,eAAe,CASnE;AAMD,wBAAgB,YAAY,CAAC,KAAK,EAAE,eAAe,GAAG,MAAM,CAgC3D;AAMD,wBAAgB,WAAW,CAAC,KAAK,EAAE,eAAe,GAAG,MAAM,CAmC1D;AAeD,wBAAgB,YAAY,CAAC,KAAK,EAAE,eAAe,GAAG,MAAM,CAmB3D;AAMD,wBAAgB,kBAAkB,CAAC,KAAK,EAAE,eAAe,GAAG,MAAM,CAiCjE;AAED,wBAAgB,kBAAkB,CAAC,KAAK,EAAE,eAAe,EAAE,KAAK,EAAE,eAAe,GAAG,MAAM,CAWzF;AAED,eAAO,MAAM,iBAAiB,SAU1B,CAAC"}
+{"version":3,"file":"completion.d.ts","sourceRoot":"","sources":["../../src/commands/completion.ts"],"names":[],"mappings":"AAAA;;;;;;GAMG;AAEH,OAAO,EAAY,OAAO,EAAE,MAAM,WAAW,CAAC;AAE9C,eAAO,MAAM,iBAAiB,gDAAiD,CAAC;AAChF,MAAM,MAAM,eAAe,GAAG,CAAC,OAAO,iBAAiB,CAAC,CAAC,MAAM,CAAC,CAAC;AAKjE,MAAM,WAAW,sBAAsB;IACrC,IAAI,EAAE,MAAM,CAAC;IACb,OAAO,EAAE,MAAM,EAAE,CAAC;IAClB,WAAW,EAAE,MAAM,CAAC;IACpB,uEAAuE;IACvE,KAAK,EAAE,MAAM,EAAE,CAAC;CACjB;AAED,MAAM,WAAW,eAAe;IAC9B,OAAO,EAAE,MAAM,CAAC;IAChB,WAAW,EAAE,MAAM,EAAE,CAAC;IACtB,QAAQ,EAAE,sBAAsB,EAAE,CAAC;CACpC;AAeD,wBAAgB,oBAAoB,CAAC,IAAI,EAAE,OAAO,GAAG,eAAe,CASnE;AAMD,wBAAgB,YAAY,CAAC,KAAK,EAAE,eAAe,GAAG,MAAM,CAgC3D;AAMD,wBAAgB,WAAW,CAAC,KAAK,EAAE,eAAe,GAAG,MAAM,CA8C1D;AAeD,wBAAgB,YAAY,CAAC,KAAK,EAAE,eAAe,GAAG,MAAM,CAsB3D;AAMD,wBAAgB,kBAAkB,CAAC,KAAK,EAAE,eAAe,GAAG,MAAM,CAsCjE;AAED,wBAAgB,kBAAkB,CAAC,KAAK,EAAE,eAAe,EAAE,KAAK,EAAE,eAAe,GAAG,MAAM,CAWzF;AAED,eAAO,MAAM,iBAAiB,SAU1B,CAAC"}

package/dist/commands/completion.js

@@ -71,6 +71,7 @@ export function generateZsh(model) {
     const commandEntries = model.commands
         .flatMap((command) => [command.name, ...command.aliases].map((name) => `    '${zshEscape(`${name}:${command.description}`)}'`))
         .join('\n');
+    const shellEntries = COMPLETION_SHELLS.map((shell) => `    '${zshEscape(`${shell}:${shell}`)}'`).join('\n');
     const cases = model.commands
         .flatMap((command) => [command.name, ...command.aliases].map((name) => `    ${name}) flags=(${command.flags.join(' ')}) ;;`))
         .join('\n');
@@ -85,6 +86,14 @@ ${commandEntries}
     _describe -t commands '${model.program} command' commands
     return
   fi
+  local -a shells
+  shells=(
+${shellEntries}
+  )
+  if [[ "\${words[2]}" = "completion" ]]; then
+    _describe -t shells '${model.program} completion shell' shells
+    return
+  fi
   local -a flags
   case "\${words[2]}" in
 ${cases}
@@ -118,6 +127,7 @@ export function generateFish(model) {
             lines.push(`complete -c ${model.program} -n '__fish_use_subcommand' -a ${name} -d '${fishEscape(command.description)}'`);
         }
     }
+    lines.push(`complete -c ${model.program} -n '__fish_seen_subcommand_from completion' -a '${COMPLETION_SHELLS.join(' ')}'`);
     for (const command of model.commands) {
         const seen = [command.name, ...command.aliases].join(' ');
         lines.push(`complete -c ${model.program} -n '__fish_seen_subcommand_from ${seen}' ${fishWordFlags(command.flags)}`);
@@ -132,6 +142,7 @@ export function generatePowerShell(model) {
         .flatMap((command) => [command.name, ...command.aliases])
         .map((name) => `'${name}'`)
         .join(', ');
+    const shellNames = COMPLETION_SHELLS.map((shell) => `'${shell}'`).join(', ');
     const global = model.globalFlags.map((flag) => `'${flag}'`).join(', ');
     const cases = model.commands
         .flatMap((command) => [command.name, ...command.aliases].map((name) => `    '${name}' = @(${command.flags.map((flag) => `'${flag}'`).join(', ')})`))
@@ -140,12 +151,15 @@ export function generatePowerShell(model) {
 Register-ArgumentCompleter -Native -CommandName '${psEscape(model.program)}' -ScriptBlock {
   param($wordToComplete, $commandAst, $cursorPosition)
   $commands = @(${commandNames})
+  $shells = @(${shellNames})
   $globals = @(${global})
   $byCommand = @{
 ${cases}
   }
   $elements = @($commandAst.CommandElements | ForEach-Object { $_.ToString() })
-  $candidates = if ($elements.Count -gt 1 -and $byCommand.ContainsKey($elements[1])) {
+  $candidates = if ($elements.Count -gt 1 -and $elements[1] -eq 'completion') {
+    $shells + $globals
+  } elseif ($elements.Count -gt 1 -and $byCommand.ContainsKey($elements[1])) {
     $byCommand[$elements[1]] + $globals
   } else {
     $commands + $globals

package/dist/commands/completion.js.map

@@ -1 +1 @@
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package/dist/commands/doctor.d.ts.map

@@ -1 +1 @@
-{"version":3,"file":"doctor.d.ts","sourceRoot":"","sources":["../../src/commands/doctor.ts"],"names":[],"mappings":"AAAA,OAAO,EAAE,OAAO,EAAE,MAAM,WAAW,CAAC;AAiCpC,MAAM,MAAM,YAAY,GAAG,IAAI,GAAG,MAAM,GAAG,MAAM,CAAC;AAElD,MAAM,WAAW,UAAU;IACzB,MAAM,EAAE,YAAY,CAAC;IACrB,KAAK,EAAE,MAAM,CAAC;IACd,MAAM,EAAE,MAAM,CAAC;CAChB;AAED,MAAM,WAAW,aAAa;IAC5B,KAAK,EAAE,MAAM,CAAC;IACd,KAAK,EAAE,UAAU,EAAE,CAAC;CACrB;AAQD,MAAM,WAAW,UAAU;IACzB,OAAO,EAAE,QAAQ,CAAC;IAClB,MAAM,EAAE,IAAI,GAAG,MAAM,CAAC;IACtB,QAAQ,EAAE,CAAC,GAAG,CAAC,CAAC;IAChB,QAAQ,EAAE,aAAa,EAAE,CAAC;CAC3B;AAED,wBAAgB,YAAY,CAAC,QAAQ,EAAE,aAAa,EAAE,GAAG,UAAU,CAQlE;AAED;;;GAGG;AACH,wBAAgB,oBAAoB,CAClC,QAAQ,EAAE,aAAa,EAAE,EACzB,GAAG,EAAE,MAAM,GACV,aAAa,EAAE,GAAG,SAAS,CAS7B;AAED,wBAAgB,YAAY,CAC1B,QAAQ,EAAE,aAAa,EAAE,EACzB,OAAO,GAAE;IAAE,cAAc,CAAC,EAAE,OAAO,CAAA;CAAO,GACzC,MAAM,CAgBR;AA4LD,eAAO,MAAM,aAAa,SAqCtB,CAAC"}
+{"version":3,"file":"doctor.d.ts","sourceRoot":"","sources":["../../src/commands/doctor.ts"],"names":[],"mappings":"AAAA,OAAO,EAAE,OAAO,EAAE,MAAM,WAAW,CAAC;AAmCpC,MAAM,MAAM,YAAY,GAAG,IAAI,GAAG,MAAM,GAAG,MAAM,CAAC;AAElD,MAAM,WAAW,UAAU;IACzB,MAAM,EAAE,YAAY,CAAC;IACrB,KAAK,EAAE,MAAM,CAAC;IACd,MAAM,EAAE,MAAM,CAAC;CAChB;AAED,MAAM,WAAW,aAAa;IAC5B,KAAK,EAAE,MAAM,CAAC;IACd,KAAK,EAAE,UAAU,EAAE,CAAC;CACrB;AAQD,MAAM,WAAW,UAAU;IACzB,OAAO,EAAE,QAAQ,CAAC;IAClB,MAAM,EAAE,IAAI,GAAG,MAAM,CAAC;IACtB,QAAQ,EAAE,CAAC,GAAG,CAAC,CAAC;IAChB,QAAQ,EAAE,aAAa,EAAE,CAAC;CAC3B;AAED,wBAAgB,YAAY,CAAC,QAAQ,EAAE,aAAa,EAAE,GAAG,UAAU,CAQlE;AAED;;;GAGG;AACH,wBAAgB,oBAAoB,CAClC,QAAQ,EAAE,aAAa,EAAE,EACzB,GAAG,EAAE,MAAM,GACV,aAAa,EAAE,GAAG,SAAS,CAS7B;AAED,wBAAgB,YAAY,CAC1B,QAAQ,EAAE,aAAa,EAAE,EACzB,OAAO,GAAE;IAAE,cAAc,CAAC,EAAE,OAAO,CAAA;CAAO,GACzC,MAAM,CAgBR;AAuMD,eAAO,MAAM,aAAa,SAqCtB,CAAC"}

package/dist/commands/doctor.js

@@ -1,13 +1,13 @@
 import { Command } from 'commander';
 import * as fs from 'fs';
 import * as path from 'path';
-import { AGENT_COMMANDS, isAgentInstalled, resolveBinary } from '../adapters/detect.js';
+import { AGENT_COMMANDS, isAgentInstalled } from '../adapters/detect.js';
 import { isQuiet, LOGO, resolveResultLine, setQuietEnabled, shouldPrintBanner, } from '../ui/output.js';
 import { theme } from '../ui/theme.js';
 import { BINARY_MAP, getEnabledAgents, loadConfig, TOOL_KEYS, validateConfig, } from '../config/schema.js';
 import { findConfigPath, userConfigDir } from '../config/scopes.js';
 import { bashExecutable, detectShell } from '../shell/detector.js';
-import { getMiseVersion, getShimsDirValue, isMiseInstalled, miseGlobalConfigPath, miseInstallInstructions, shimsDir, shimsDirOnPath, } from '../toolchain/mise.js';
+import { getInstalledToolState, getMiseVersion, getShimsDirValue, isMiseInstalled, miseGlobalConfigPath, miseInstallInstructions, shimsDir, shimsDirOnPath, toolAvailabilityClassification, } from '../toolchain/mise.js';
 const STATUS_COLOR = {
     ok: theme.ok,
     warn: theme.warn,
@@ -166,15 +166,28 @@ function gatherDoctor() {
     // Tools
     const tools = config.tools ?? {};
     const enabledTools = TOOL_KEYS.filter((key) => tools[key] === true);
+    // Same verdict as apply's verify step: a tool apply itself skips (no mise
+    // fallback on this platform) or installs-but-needs-a-fresh-shell is never a
+    // doctor failure here, only a genuinely-missing one is.
+    const installedState = getInstalledToolState();
     const toolItems = [];
     for (const key of enabledTools) {
         const binary = BINARY_MAP[key];
-        const found = resolveBinary(binary) !== null;
-        toolItems.push({
-            status: found ? 'ok' : 'fail',
-            label: `${binary} (${key})`,
-            detail: found ? '' : 'not on PATH — run `mise install` in this project',
-        });
+        const status = toolAvailabilityClassification(key, binary, installedState);
+        const item = { status: 'ok', label: `${binary} (${key})`, detail: '' };
+        if (status === 'needs-new-terminal') {
+            item.status = 'warn';
+            item.detail = 'installed via mise; open a new terminal';
+        }
+        else if (status === 'manual') {
+            item.status = 'warn';
+            item.detail = 'not managed by mise; install manually';
+        }
+        else if (status === 'missing') {
+            item.status = 'fail';
+            item.detail = 'not on PATH — run `mise install` in this project';
+        }
+        toolItems.push(item);
     }
     sections.push({
         title: `Tools (${enabledTools.length} configured)`,

package/dist/commands/doctor.js.map

@@ -1 +1 @@
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package/dist/commands/setup.d.ts

@@ -1,5 +1,6 @@
 import { Command } from 'commander';
 import type { AgentenvConfig } from '../config/schema.js';
+import type { ScopeValue } from '../config/scopes.js';
 import { applyConfiguration } from './apply.js';
 interface MisePrereqCheckDeps {
     isInstalled?: () => boolean;
@@ -24,7 +25,7 @@ export declare function saveAndApply(config: AgentenvConfig, file: string, deps?
 interface SetupCommandOptions {
     yes?: boolean;
     agents?: string;
-    scope?: string;
+    scope?: ScopeValue;
     tier2?: boolean;
     rtk?: boolean;
     config?: string;

package/dist/commands/setup.d.ts.map

@@ -1 +1 @@
-{"version":3,"file":"setup.d.ts","sourceRoot":"","sources":["../../src/commands/setup.ts"],"names":[],"mappings":"AAAA,OAAO,EAAE,OAAO,EAAE,MAAM,WAAW,CAAC;AAIpC,OAAO,KAAK,EAAY,cAAc,EAAE,MAAM,qBAAqB,CAAC;AAEpE,OAAO,EAAE,kBAAkB,EAAE,MAAM,YAAY,CAAC;AAmBhD,UAAU,mBAAmB;IAC3B,WAAW,CAAC,EAAE,MAAM,OAAO,CAAC;IAC5B,OAAO,CAAC,EAAE,MAAM,MAAM,CAAC;CACxB;AAED;;;;GAIG;AACH,wBAAgB,eAAe,CAAC,IAAI,GAAE,mBAAwB,GAAG,OAAO,CAavE;AAED,MAAM,WAAW,gBAAgB;IAC/B,iEAAiE;IACjE,kBAAkB,CAAC,EAAE,OAAO,kBAAkB,CAAC;IAC/C,wEAAwE;IACxE,cAAc,CAAC,EAAE,MAAM,CAAC;IACxB,0EAA0E;IAC1E,SAAS,CAAC,EAAE,MAAM,CAAC;CACpB;AAED,qEAAqE;AACrE,wBAAsB,YAAY,CAChC,MAAM,EAAE,cAAc,EACtB,IAAI,EAAE,MAAM,EACZ,IAAI,GAAE,gBAAqB,GAC1B,OAAO,CAAC,IAAI,CAAC,CA+Bf;AAED,UAAU,mBAAmB;IAC3B,GAAG,CAAC,EAAE,OAAO,CAAC;IACd,MAAM,CAAC,EAAE,MAAM,CAAC;IAChB,KAAK,CAAC,EAAE,MAAM,CAAC;IACf,KAAK,CAAC,EAAE,OAAO,CAAC;IAChB,GAAG,CAAC,EAAE,OAAO,CAAC;IACd,MAAM,CAAC,EAAE,MAAM,CAAC;IAChB,WAAW,CAAC,EAAE,MAAM,GAAG,OAAO,CAAC;CAChC;AAED,MAAM,WAAW,mBAAoB,SAAQ,gBAAgB;IAC3D,mBAAmB,CAAC,EAAE,mBAAmB,CAAC;CAC3C;AAED;;;;;;;GAOG;AACH,wBAAsB,eAAe,CACnC,OAAO,EAAE,mBAAmB,EAC5B,IAAI,GAAE,mBAAwB,GAC7B,OAAO,CAAC,IAAI,CAAC,CA+Ef;AAED,eAAO,MAAM,YAAY,SAsBrB,CAAC"}
+{"version":3,"file":"setup.d.ts","sourceRoot":"","sources":["../../src/commands/setup.ts"],"names":[],"mappings":"AAAA,OAAO,EAAE,OAAO,EAAE,MAAM,WAAW,CAAC;AAIpC,OAAO,KAAK,EAAY,cAAc,EAAE,MAAM,qBAAqB,CAAC;AAEpE,OAAO,KAAK,EAAE,UAAU,EAAE,MAAM,qBAAqB,CAAC;AACtD,OAAO,EAAE,kBAAkB,EAAE,MAAM,YAAY,CAAC;AAmBhD,UAAU,mBAAmB;IAC3B,WAAW,CAAC,EAAE,MAAM,OAAO,CAAC;IAC5B,OAAO,CAAC,EAAE,MAAM,MAAM,CAAC;CACxB;AAED;;;;GAIG;AACH,wBAAgB,eAAe,CAAC,IAAI,GAAE,mBAAwB,GAAG,OAAO,CAavE;AAED,MAAM,WAAW,gBAAgB;IAC/B,iEAAiE;IACjE,kBAAkB,CAAC,EAAE,OAAO,kBAAkB,CAAC;IAC/C,wEAAwE;IACxE,cAAc,CAAC,EAAE,MAAM,CAAC;IACxB,0EAA0E;IAC1E,SAAS,CAAC,EAAE,MAAM,CAAC;CACpB;AAED,qEAAqE;AACrE,wBAAsB,YAAY,CAChC,MAAM,EAAE,cAAc,EACtB,IAAI,EAAE,MAAM,EACZ,IAAI,GAAE,gBAAqB,GAC1B,OAAO,CAAC,IAAI,CAAC,CA+Bf;AAED,UAAU,mBAAmB;IAC3B,GAAG,CAAC,EAAE,OAAO,CAAC;IACd,MAAM,CAAC,EAAE,MAAM,CAAC;IAChB,KAAK,CAAC,EAAE,UAAU,CAAC;IACnB,KAAK,CAAC,EAAE,OAAO,CAAC;IAChB,GAAG,CAAC,EAAE,OAAO,CAAC;IACd,MAAM,CAAC,EAAE,MAAM,CAAC;IAChB,WAAW,CAAC,EAAE,MAAM,GAAG,OAAO,CAAC;CAChC;AAED,MAAM,WAAW,mBAAoB,SAAQ,gBAAgB;IAC3D,mBAAmB,CAAC,EAAE,mBAAmB,CAAC;CAC3C;AAED;;;;;;;GAOG;AACH,wBAAsB,eAAe,CACnC,OAAO,EAAE,mBAAmB,EAC5B,IAAI,GAAE,mBAAwB,GAC7B,OAAO,CAAC,IAAI,CAAC,CA+Ef;AAED,eAAO,MAAM,YAAY,SA2BrB,CAAC"}

package/dist/commands/setup.js

@@ -2,7 +2,7 @@ import { Command } from 'commander';
 import * as fs from 'fs';
 import { detectInstalledAgents } from '../adapters/detect.js';
 import { loadConfig, saveConfig, validateConfig } from '../config/schema.js';
-import { configFilePath, resolveScopeDir } from '../config/scopes.js';
+import { configFilePath, parseScopeFlag, resolveScopeDir } from '../config/scopes.js';
 import { applyConfiguration } from './apply.js';
 import { runConfigWizard } from './wizard.js';
 import { AGENT_OPTIONS, buildDefaultSimpleConfig, parseAgentsInput } from '../wizard/build.js';
@@ -98,7 +98,7 @@ export async function unattendedSetup(options, deps = {}) {
         file = configFilePath(config.scope ?? 'project');
     }
     else {
-        const scope = options.scope === 'user' ? 'user' : 'project';
+        const scope = options.scope ?? 'project';
         file = configFilePath(scope);
         if (fs.existsSync(file)) {
             printConfigPath(file);
@@ -154,9 +154,14 @@ export const setupCommand = new Command()
     .option('--no-rtk', 'disable rtk command rewriting (unattended)')
     .option('--superpowers [ref]', 'enable the Superpowers integration (unattended); optional github tag/branch/commit ref')
     .option('--config <path>', 'path to an existing agentenv.toml to apply (unattended)')
-    .action(async (options) => {
+    .action(async (options, command) => {
+    const scope = parseScopeFlag(options.scope);
+    if (scope.error) {
+        command.error(scope.error);
+        return;
+    }
     if (options.yes) {
-        await unattendedSetup(options);
+        await unattendedSetup({ ...options, scope: scope.scope });
         return;
     }
     await runConfigWizard();

package/dist/commands/setup.js.map

@@ -1 +1 @@
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package/dist/commands/shell-fix.d.ts.map

@@ -1 +1 @@
-{"version":3,"file":"shell-fix.d.ts","sourceRoot":"","sources":["../../src/commands/shell-fix.ts"],"names":[],"mappings":"AAAA;;;;;GAKG;AAEH,OAAO,EAAE,OAAO,EAAE,MAAM,WAAW,CAAC;AACpC,OAAO,EAGL,KAAK,kBAAkB,EACxB,MAAM,6BAA6B,CAAC;AACrC,OAAO,EAGL,KAAK,oBAAoB,EAC1B,MAAM,sBAAsB,CAAC;AAC9B,OAAO,KAAK,EAAE,QAAQ,EAAE,MAAM,qBAAqB,CAAC;AAOpD,MAAM,WAAW,eAAe;IAC9B,KAAK,EAAE,QAAQ,CAAC;IAChB,UAAU,EAAE,OAAO,CAAC;IACpB,KAAK,EAAE,MAAM,GAAG,IAAI,CAAC;CACtB;AAED,MAAM,WAAW,gBAAgB;IAC/B,OAAO,EAAE,WAAW,CAAC;IACrB,SAAS,EAAE,MAAM,CAAC;IAClB,OAAO,EAAE,MAAM,GAAG,IAAI,CAAC;IACvB,QAAQ,EAAE,kBAAkB,EAAE,CAAC;IAC/B,OAAO,EAAE,eAAe,EAAE,CAAC;IAC3B,QAAQ,EAAE,CAAC,CAAC;CACb;AAED,8EAA8E;AAC9E,wBAAgB,kBAAkB,IAAI,gBAAgB,CAcrD;AAED,wBAAgB,kBAAkB,CAAC,OAAO,EAAE,gBAAgB,GAAG,MAAM,CAsBpE;AAED,wBAAgB,oBAAoB,CAAC,OAAO,EAAE,oBAAoB,EAAE,EAAE,MAAM,EAAE,OAAO,GAAG,MAAM,EAAE,CAI/F;AAQD,eAAO,MAAM,eAAe,SAiExB,CAAC"}
+{"version":3,"file":"shell-fix.d.ts","sourceRoot":"","sources":["../../src/commands/shell-fix.ts"],"names":[],"mappings":"AAAA;;;;;GAKG;AAEH,OAAO,EAAE,OAAO,EAAE,MAAM,WAAW,CAAC;AACpC,OAAO,EAGL,KAAK,kBAAkB,EACxB,MAAM,6BAA6B,CAAC;AACrC,OAAO,EAGL,KAAK,oBAAoB,EAC1B,MAAM,sBAAsB,CAAC;AAC9B,OAAO,KAAK,EAAE,QAAQ,EAAE,MAAM,qBAAqB,CAAC;AAOpD,MAAM,WAAW,eAAe;IAC9B,KAAK,EAAE,QAAQ,CAAC;IAChB,UAAU,EAAE,OAAO,CAAC;IACpB,KAAK,EAAE,MAAM,GAAG,IAAI,CAAC;CACtB;AAED,MAAM,WAAW,gBAAgB;IAC/B,OAAO,EAAE,WAAW,CAAC;IACrB,SAAS,EAAE,MAAM,CAAC;IAClB,OAAO,EAAE,MAAM,GAAG,IAAI,CAAC;IACvB,QAAQ,EAAE,kBAAkB,EAAE,CAAC;IAC/B,OAAO,EAAE,eAAe,EAAE,CAAC;IAC3B,QAAQ,EAAE,CAAC,CAAC;CACb;AAED,8EAA8E;AAC9E,wBAAgB,kBAAkB,IAAI,gBAAgB,CAcrD;AAED,wBAAgB,kBAAkB,CAAC,OAAO,EAAE,gBAAgB,GAAG,MAAM,CAsBpE;AAED,wBAAgB,oBAAoB,CAAC,OAAO,EAAE,oBAAoB,EAAE,EAAE,MAAM,EAAE,OAAO,GAAG,MAAM,EAAE,CAI/F;AAQD,eAAO,MAAM,eAAe,SAsExB,CAAC"}

package/dist/commands/shell-fix.js

@@ -66,6 +66,10 @@ export const shellFixCommand = new Command()
         command.error('--json cannot be combined with --revert (revert mutates files).');
         return;
     }
+    if (options.dryRun === true && options.revert !== true) {
+        command.error('--dry-run only applies to --revert (show mode is already read-only).');
+        return;
+    }
     if (options.revert === true) {
         renderLogo();
         const dryRun = options.dryRun === true;

package/dist/commands/shell-fix.js.map

@@ -1 +1 @@
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package/dist/commands/status.d.ts

@@ -6,7 +6,8 @@ import { findConfigPath, resolveScopeDir } from '../config/scopes.js';
 import { checkAgentShellConfiguration, detectShell } from '../shell/detector.js';
 import type { IntegrationResult, IntegrationState } from '../integrations/base.js';
 import { resolveGhAuthProbe } from '../toolchain/gh.js';
-import { getInstalledToolState, getMiseVersion } from '../toolchain/mise.js';
+import { getInstalledToolState, getMiseVersion, shimExists } from '../toolchain/mise.js';
+import type { ToolResolvability } from '../toolchain/mise.js';
 declare const AGENT_CONFIG_FILES: Record<AgentKey, {
     label: string;
     check: (baseDir: string) => string;
@@ -24,6 +25,8 @@ export interface StatusTool {
     binary: string;
     tier: number;
     found: boolean;
+    /** `resolvable` | `needs-new-terminal` | `manual` | `missing` — the same verdict apply's verify step uses, so a tool apply deliberately skips is never drift here. */
+    status: ToolResolvability;
     drift: boolean;
     /** Resolved explicit pin (`tool_versions` or agentenv's internal pin), or `null` for `latest`. */
     pinned: string | null;
@@ -114,6 +117,7 @@ export interface StatusDeps {
     getEnabledAgents?: typeof getEnabledAgents;
     isAgentInstalled?: typeof isAgentInstalled;
     resolveBinary?: typeof resolveBinary;
+    shimExists?: typeof shimExists;
     detectShell?: typeof detectShell;
     checkAgentShellConfiguration?: typeof checkAgentShellConfiguration;
     fileExists?: (file: string) => boolean;

package/dist/commands/status.d.ts.map

@@ -1 +1 @@
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