@indemn/cli 1.5.0 → 1.7.0

package/dist/cli/index.js

@@ -1,8 +1,5 @@
 #!/usr/bin/env node
 import { Command } from 'commander';
-import { fileURLToPath } from 'node:url';
-import { dirname, join, resolve } from 'node:path';
-import { cpSync, mkdirSync, writeFileSync, existsSync } from 'node:fs';
 import { registerAuthCommands } from './auth.js';
 import { registerAgentCommands } from './agents.js';
 import { registerConfigCommands } from './config.js';
@@ -11,13 +8,26 @@ import { registerKBCommands } from './kb.js';
 import { registerEvalCommands } from './eval.js';
 import { registerChatCommand } from './chat.js';
 import { registerOrgCommands } from './org.js';
-import { printBanner } from './utils/output.js';
+import { registerLinkCommands } from './link.js';
+import { registerConversationCommands } from './conversations.js';
+import { registerVoiceCommands } from './voice.js';
+import { registerDistributionCommands } from './distribution.js';
+import { registerAnalyticsCommands } from './analytics.js';
+import { registerTicketCommands } from './tickets.js';
+import { registerBillingCommands } from './billing.js';
+import { registerCampaignCommands } from './campaigns.js';
+import { registerPlatformCommands } from './platform.js';
+import { registerInitCommand } from './init.js';
+import { askMfaInTerminal, askOrgInTerminal, installBanner } from './utils/output.js';
+import { setAskers, setOrgFlag } from '../core/scope.js';
+import { cliVersion, isNonInteractive } from '../core/runtime.js';
 const program = new Command();
 program
     .name('indemn')
     .description('CLI for managing Indemn AI agents')
-    .version('1.5.0');
-program.option('--env <environment>', 'Environment (dev or production)');
+    .version(cliVersion());
+program.option('--debug', 'Print every request and response status to stderr');
+program.option('--org <id>', 'Organization to act on (otherwise: linked folder, your only org, or you are asked)');
 program.option('--no-banner', 'Suppress the active-org banner');
 // Commands that already surface org identity themselves — no banner needed.
 const BANNER_SKIP = new Set([
@@ -26,7 +36,10 @@ const BANNER_SKIP = new Set([
     'whoami',
     'init',
     'org list',
+    'org current',
     'org switch',
+    'link',
+    'unlink',
     'mcp serve',
 ]);
 function fullCommandName(cmd) {
@@ -41,8 +54,14 @@ function fullCommandName(cmd) {
 // Hook runs before any command action
 program.hook('preAction', async (thisCommand, actionCommand) => {
     const globalOpts = thisCommand.opts();
-    if (globalOpts.env) {
-        process.env.INDEMN_ENV = globalOpts.env;
+    // The environment is fixed by `indemn login --env`; there is no per-command switch.
+    if (globalOpts.debug) {
+        process.env.INDEMN_DEBUG = '1';
+    }
+    setOrgFlag(globalOpts.org);
+    // Ask in the terminal only when a person can answer; agents and CI get exit code 2 instead.
+    if (fullCommandName(actionCommand) !== 'mcp serve' && !isNonInteractive()) {
+        setAskers({ chooseOrg: askOrgInTerminal, mfaCode: askMfaInTerminal });
     }
     // Banner suppression: global flag, env var, command opts-out, or JSON output mode.
     if (globalOpts.banner === false)
@@ -54,17 +73,50 @@ program.hook('preAction', async (thisCommand, actionCommand) => {
         return;
     if (BANNER_SKIP.has(fullCommandName(actionCommand)))
         return;
-    await printBanner();
+    installBanner();
 });
 // Register all command groups
 registerAuthCommands(program);
+// Groups other modules extend (org, agents) are registered first.
+registerOrgCommands(program);
+registerLinkCommands(program);
 registerAgentCommands(program);
 registerConfigCommands(program);
 registerFunctionCommands(program);
 registerKBCommands(program);
 registerEvalCommands(program);
 registerChatCommand(program);
-registerOrgCommands(program);
+registerConversationCommands(program);
+registerVoiceCommands(program);
+registerDistributionCommands(program);
+registerAnalyticsCommands(program);
+registerTicketCommands(program);
+registerBillingCommands(program);
+registerCampaignCommands(program);
+registerPlatformCommands(program);
+program
+    .command('channels')
+    .description('Channels an agent can be published on')
+    .command('list')
+    .description('List channels')
+    .option('--json', 'Output as JSON')
+    .action(async (options) => {
+    const { IndemnClient } = await import('../sdk/client.js');
+    const { OrgsSDK } = await import('../sdk/orgs.js');
+    const { formatTable, printJson, printError } = await import('./utils/output.js');
+    try {
+        const channels = await new OrgsSDK(new IndemnClient()).listChannels();
+        if (options.json) {
+            printJson(channels);
+            return;
+        }
+        console.log(formatTable(['ID', 'Name', 'Type', 'Description'], channels.map((c) => [c._id, c.name, c.type ?? '', c.description ?? ''])));
+    }
+    catch (err) {
+        printError(err);
+        process.exit(1);
+    }
+});
 // MCP serve command
 const mcp = program.command('mcp').description('MCP server commands');
 mcp
@@ -97,49 +149,6 @@ program
         process.exit(1);
     }
 });
-// Init command — set up Claude Code integration
-program
-    .command('init')
-    .description('Set up Claude Code skills in the current project')
-    .option('--force', 'Overwrite existing files')
-    .action(async (options) => {
-    const __filename = fileURLToPath(import.meta.url);
-    const __dirname = dirname(__filename);
-    const packageRoot = resolve(__dirname, '..', '..');
-    const skillsSource = join(packageRoot, 'skills');
-    const cwd = process.cwd();
-    const skillsTarget = join(cwd, '.claude', 'skills', 'indemn');
-    const rulesTarget = join(cwd, '.claude', 'rules');
-    if (existsSync(skillsTarget) && !options.force) {
-        console.log('Indemn skills already installed. Use --force to overwrite.');
-        return;
-    }
-    // Copy skills
-    mkdirSync(skillsTarget, { recursive: true });
-    cpSync(skillsSource, skillsTarget, { recursive: true });
-    // Write rules file
-    mkdirSync(rulesTarget, { recursive: true });
-    const rulesPath = join(rulesTarget, 'indemn.md');
-    if (!existsSync(rulesPath) || options.force) {
-        writeFileSync(rulesPath, [
-            '# Indemn CLI',
-            '',
-            'The `indemn` CLI is available for managing AI agents. Run `indemn whoami` to verify authentication.',
-            '',
-            '## Skills',
-            '',
-            '- **agent-builder** — Create, configure, and test agents (prompts, functions, knowledge bases, chat)',
-            '- **evaluations** — Create rubrics and test sets, run evaluations, analyze results, export reports',
-            '',
-            'Use these skills for any agent management or evaluation task. They contain the complete command reference.',
-            '',
-        ].join('\n'));
-    }
-    console.log('Indemn CLI integration set up:');
-    console.log(`  Skills:  ${skillsTarget}/`);
-    console.log(`  Rules:   ${rulesPath}`);
-    console.log('');
-    console.log('Claude Code will now discover the indemn skills automatically.');
-});
+registerInitCommand(program);
 program.parse();
 //# sourceMappingURL=index.js.map

package/dist/cli/index.js.map

@@ -1 +1 @@
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+{"version":3,"file":"index.js","sourceRoot":"","sources":["../../src/cli/index.ts"],"names":[],"mappings":";AACA,OAAO,EAAE,OAAO,EAAE,MAAM,WAAW,CAAC;AAIpC,OAAO,EAAE,oBAAoB,EAAE,MAAM,WAAW,CAAC;AACjD,OAAO,EAAE,qBAAqB,EAAE,MAAM,aAAa,CAAC;AACpD,OAAO,EAAE,sBAAsB,EAAE,MAAM,aAAa,CAAC;AACrD,OAAO,EAAE,wBAAwB,EAAE,MAAM,gBAAgB,CAAC;AAC1D,OAAO,EAAE,kBAAkB,EAAE,MAAM,SAAS,CAAC;AAC7C,OAAO,EAAE,oBAAoB,EAAE,MAAM,WAAW,CAAC;AACjD,OAAO,EAAE,mBAAmB,EAAE,MAAM,WAAW,CAAC;AAChD,OAAO,EAAE,mBAAmB,EAAE,MAAM,UAAU,CAAC;AAC/C,OAAO,EAAE,oBAAoB,EAAE,MAAM,WAAW,CAAC;AACjD,OAAO,EAAE,4BAA4B,EAAE,MAAM,oBAAoB,CAAC;AAClE,OAAO,EAAE,qBAAqB,EAAE,MAAM,YAAY,CAAC;AACnD,OAAO,EAAE,4BAA4B,EAAE,MAAM,mBAAmB,CAAC;AACjE,OAAO,EAAE,yBAAyB,EAAE,MAAM,gBAAgB,CAAC;AAC3D,OAAO,EAAE,sBAAsB,EAAE,MAAM,cAAc,CAAC;AACtD,OAAO,EAAE,uBAAuB,EAAE,MAAM,cAAc,CAAC;AACvD,OAAO,EAAE,wBAAwB,EAAE,MAAM,gBAAgB,CAAC;AAC1D,OAAO,EAAE,wBAAwB,EAAE,MAAM,eAAe,CAAC;AACzD,OAAO,EAAE,mBAAmB,EAAE,MAAM,WAAW,CAAC;AAChD,OAAO,EAAE,gBAAgB,EAAE,gBAAgB,EAAE,aAAa,EAAE,MAAM,mBAAmB,CAAC;AACtF,OAAO,EAAE,SAAS,EAAE,UAAU,EAAE,MAAM,kBAAkB,CAAC;AACzD,OAAO,EAAE,UAAU,EAAE,gBAAgB,EAAE,MAAM,oBAAoB,CAAC;AAElE,MAAM,OAAO,GAAG,IAAI,OAAO,EAAE,CAAC;AAE9B,OAAO;KACJ,IAAI,CAAC,QAAQ,CAAC;KACd,WAAW,CAAC,mCAAmC,CAAC;KAChD,OAAO,CAAC,UAAU,EAAE,CAAC,CAAC;AAEzB,OAAO,CAAC,MAAM,CAAC,SAAS,EAAE,mDAAmD,CAAC,CAAC;AAC/E,OAAO,CAAC,MAAM,CAAC,YAAY,EAAE,oFAAoF,CAAC,CAAC;AACnH,OAAO,CAAC,MAAM,CAAC,aAAa,EAAE,gCAAgC,CAAC,CAAC;AAEhE,4EAA4E;AAC5E,MAAM,WAAW,GAAG,IAAI,GAAG,CAAC;IAC1B,OAAO;IACP,QAAQ;IACR,QAAQ;IACR,MAAM;IACN,UAAU;IACV,aAAa;IACb,YAAY;IACZ,MAAM;IACN,QAAQ;IACR,WAAW;CACZ,CAAC,CAAC;AAEH,SAAS,eAAe,CAAC,GAAY;IACnC,MAAM,KAAK,GAAa,CAAC,GAAG,CAAC,IAAI,EAAE,CAAC,CAAC;IACrC,IAAI,CAAC,GAAmB,GAAG,CAAC,MAAM,CAAC;IACnC,OAAO,CAAC,IAAI,CAAC,CAAC,IAAI,EAAE,KAAK,QAAQ,EAAE,CAAC;QAClC,KAAK,CAAC,OAAO,CAAC,CAAC,CAAC,IAAI,EAAE,CAAC,CAAC;QACxB,CAAC,GAAG,CAAC,CAAC,MAAM,CAAC;IACf,CAAC;IACD,OAAO,KAAK,CAAC,IAAI,CAAC,GAAG,CAAC,CAAC;AACzB,CAAC;AAED,sCAAsC;AACtC,OAAO,CAAC,IAAI,CAAC,WAAW,EAAE,KAAK,EAAE,WAAW,EAAE,aAAa,EAAE,EAAE;IAC7D,MAAM,UAAU,GAAG,WAAW,CAAC,IAAI,EAAE,CAAC;IACtC,oFAAoF;IACpF,IAAI,UAAU,CAAC,KAAK,EAAE,CAAC;QACrB,OAAO,CAAC,GAAG,CAAC,YAAY,GAAG,GAAG,CAAC;IACjC,CAAC;IACD,UAAU,CAAC,UAAU,CAAC,GAAG,CAAC,CAAC;IAE3B,4FAA4F;IAC5F,IAAI,eAAe,CAAC,aAAa,CAAC,KAAK,WAAW,IAAI,CAAC,gBAAgB,EAAE,EAAE,CAAC;QAC1E,SAAS,CAAC,EAAE,SAAS,EAAE,gBAAgB,EAAE,OAAO,EAAE,gBAAgB,EAAE,CAAC,CAAC;IACxE,CAAC;IAED,mFAAmF;IACnF,IAAI,UAAU,CAAC,MAAM,KAAK,KAAK;QAAE,OAAO;IACxC,IAAI,OAAO,CAAC,GAAG,CAAC,gBAAgB,KAAK,GAAG;QAAE,OAAO;IACjD,MAAM,UAAU,GAAG,aAAa,CAAC,IAAI,EAAE,CAAC;IACxC,IAAI,UAAU,CAAC,IAAI;QAAE,OAAO;IAC5B,IAAI,WAAW,CAAC,GAAG,CAAC,eAAe,CAAC,aAAa,CAAC,CAAC;QAAE,OAAO;IAE5D,aAAa,EAAE,CAAC;AAClB,CAAC,CAAC,CAAC;AAEH,8BAA8B;AAC9B,oBAAoB,CAAC,OAAO,CAAC,CAAC;AAC9B,kEAAkE;AAClE,mBAAmB,CAAC,OAAO,CAAC,CAAC;AAC7B,oBAAoB,CAAC,OAAO,CAAC,CAAC;AAC9B,qBAAqB,CAAC,OAAO,CAAC,CAAC;AAC/B,sBAAsB,CAAC,OAAO,CAAC,CAAC;AAChC,wBAAwB,CAAC,OAAO,CAAC,CAAC;AAClC,kBAAkB,CAAC,OAAO,CAAC,CAAC;AAC5B,oBAAoB,CAAC,OAAO,CAAC,CAAC;AAC9B,mBAAmB,CAAC,OAAO,CAAC,CAAC;AAC7B,4BAA4B,CAAC,OAAO,CAAC,CAAC;AACtC,qBAAqB,CAAC,OAAO,CAAC,CAAC;AAC/B,4BAA4B,CAAC,OAAO,CAAC,CAAC;AACtC,yBAAyB,CAAC,OAAO,CAAC,CAAC;AACnC,sBAAsB,CAAC,OAAO,CAAC,CAAC;AAChC,uBAAuB,CAAC,OAAO,CAAC,CAAC;AACjC,wBAAwB,CAAC,OAAO,CAAC,CAAC;AAClC,wBAAwB,CAAC,OAAO,CAAC,CAAC;AAElC,OAAO;KACJ,OAAO,CAAC,UAAU,CAAC;KACnB,WAAW,CAAC,uCAAuC,CAAC;KACpD,OAAO,CAAC,MAAM,CAAC;KACf,WAAW,CAAC,eAAe,CAAC;KAC5B,MAAM,CAAC,QAAQ,EAAE,gBAAgB,CAAC;KAClC,MAAM,CAAC,KAAK,EAAE,OAAO,EAAE,EAAE;IACxB,MAAM,EAAE,YAAY,EAAE,GAAG,MAAM,MAAM,CAAC,kBAAkB,CAAC,CAAC;IAC1D,MAAM,EAAE,OAAO,EAAE,GAAG,MAAM,MAAM,CAAC,gBAAgB,CAAC,CAAC;IACnD,MAAM,EAAE,WAAW,EAAE,SAAS,EAAE,UAAU,EAAE,GAAG,MAAM,MAAM,CAAC,mBAAmB,CAAC,CAAC;IACjF,IAAI,CAAC;QACH,MAAM,QAAQ,GAAG,MAAM,IAAI,OAAO,CAAC,IAAI,YAAY,EAAE,CAAC,CAAC,YAAY,EAAE,CAAC;QACtE,IAAI,OAAO,CAAC,IAAI,EAAE,CAAC;YAAC,SAAS,CAAC,QAAQ,CAAC,CAAC;YAAC,OAAO;QAAC,CAAC;QAClD,OAAO,CAAC,GAAG,CAAC,WAAW,CAAC,CAAC,IAAI,EAAE,MAAM,EAAE,MAAM,EAAE,aAAa,CAAC,EAAE,QAAQ,CAAC,GAAG,CAAC,CAAC,CAAC,EAAE,EAAE,CAAC,CAAC,CAAC,CAAC,GAAG,EAAE,CAAC,CAAC,IAAI,EAAE,CAAC,CAAC,IAAI,IAAI,EAAE,EAAE,CAAC,CAAC,WAAW,IAAI,EAAE,CAAC,CAAC,CAAC,CAAC,CAAC;IAC3I,CAAC;IAAC,OAAO,GAAG,EAAE,CAAC;QAAC,UAAU,CAAC,GAAG,CAAC,CAAC;QAAC,OAAO,CAAC,IAAI,CAAC,CAAC,CAAC,CAAC;IAAC,CAAC;AACrD,CAAC,CAAC,CAAC;AAEL,oBAAoB;AACpB,MAAM,GAAG,GAAG,OAAO,CAAC,OAAO,CAAC,KAAK,CAAC,CAAC,WAAW,CAAC,qBAAqB,CAAC,CAAC;AAEtE,GAAG;KACA,OAAO,CAAC,OAAO,CAAC;KAChB,WAAW,CAAC,kBAAkB,CAAC;KAC/B,MAAM,CAAC,KAAK,IAAI,EAAE;IACjB,MAAM,EAAE,WAAW,EAAE,GAAG,MAAM,MAAM,CAAC,kBAAkB,CAAC,CAAC;IACzD,MAAM,WAAW,EAAE,CAAC;AACtB,CAAC,CAAC,CAAC;AAEL,iBAAiB;AACjB,OAAO;KACJ,OAAO,CAAC,QAAQ,CAAC;KACjB,WAAW,CAAC,2BAA2B,CAAC;KACxC,MAAM,CAAC,QAAQ,EAAE,gBAAgB,CAAC;KAClC,MAAM,CAAC,KAAK,EAAE,OAAO,EAAE,EAAE;IACxB,MAAM,EAAE,YAAY,EAAE,GAAG,MAAM,MAAM,CAAC,kBAAkB,CAAC,CAAC;IAC1D,MAAM,EAAE,YAAY,EAAE,GAAG,MAAM,MAAM,CAAC,qBAAqB,CAAC,CAAC;IAC7D,MAAM,GAAG,GAAG,CAAC,MAAM,MAAM,CAAC,KAAK,CAAC,CAAC,CAAC,OAAO,CAAC;IAC1C,MAAM,EAAE,SAAS,EAAE,UAAU,EAAE,GAAG,MAAM,MAAM,CAAC,mBAAmB,CAAC,CAAC;IACpE,IAAI,CAAC;QACH,MAAM,MAAM,GAAG,IAAI,YAA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package/dist/cli/init.d.ts

@@ -0,0 +1,27 @@
+import { Command } from 'commander';
+export declare const MCP_SERVER_ENTRY: {
+    command: string;
+    args: string[];
+};
+/** Claude Code permission rules: read-only tools run without asking, anything that changes the platform asks every time. */
+export declare function permissionBlock(): {
+    allow: string[];
+    ask: string[];
+};
+export interface InitReport {
+    skills: string;
+    rules: string;
+    mcp: 'added' | 'kept' | 'skipped';
+    permissions: 'added' | 'merged' | 'skipped';
+}
+/** Set up Claude Code in `cwd`. Existing files are merged, never overwritten, unless force is set for skills and rules. */
+export declare function initProject(cwd: string, opts?: {
+    force?: boolean;
+    mcp?: boolean;
+    permissions?: boolean;
+    packageRoot?: string;
+}): InitReport;
+/** What is set up in `cwd`, for `indemn init --status`. */
+export declare function initStatus(cwd: string): Array<[string, boolean, string]>;
+export declare function registerInitCommand(program: Command): void;
+//# sourceMappingURL=init.d.ts.map

package/dist/cli/init.d.ts.map

@@ -0,0 +1 @@
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package/dist/cli/init.js

@@ -0,0 +1,152 @@
+import chalk from 'chalk';
+import { cpSync, existsSync, mkdirSync, readdirSync, readFileSync, writeFileSync } from 'node:fs';
+import { dirname, join, resolve } from 'node:path';
+import { fileURLToPath } from 'node:url';
+import { TOOL_META } from '../mcp/tool-meta.js';
+import { IndemnClient } from '../sdk/client.js';
+import { findLinkFile } from '../core/org-resolver.js';
+import { printError, printSuccess } from './utils/output.js';
+export const MCP_SERVER_ENTRY = { command: 'npx', args: ['-y', '@indemn/cli', 'mcp', 'serve'] };
+/** Claude Code permission rules: read-only tools run without asking, anything that changes the platform asks every time. */
+export function permissionBlock() {
+    const allow = [];
+    const ask = [];
+    for (const [name, meta] of Object.entries(TOOL_META)) {
+        const rule = `mcp__indemn__${name}`;
+        if (meta.annotations.readOnlyHint && !meta.guard)
+            allow.push(rule);
+        else
+            ask.push(rule);
+    }
+    return { allow: allow.sort(), ask: ask.sort() };
+}
+function readJson(path) {
+    if (!existsSync(path))
+        return {};
+    try {
+        return JSON.parse(readFileSync(path, 'utf8'));
+    }
+    catch {
+        throw new Error(`${path} is not valid JSON; fix it or move it away, then run init again.`);
+    }
+}
+const RULES = `# Indemn CLI
+
+The \`indemn\` CLI and its MCP server manage Indemn AI agents. Run \`indemn whoami\` to see the platform (dev or production), the user and which org commands here act on.
+
+- Every chat with an agent is a test conversation: never billed, never in analytics, shown with the tester's name.
+- Actions that change or delete something are approved by the user first. When an approval form appears, that form is the question: call the tool and do not ask again in chat. When a tool returns a dry_run instead, show it and pass confirm: true only after the user agreed to that exact change.
+- If a tool returns needs_input (for example which org), ask the user and call again with their answer.
+- Talk in names: call agents, knowledge bases, test sets and runs by their names; show ids only when asked or to tell two items apart. Plain words, short answers, details on request.
+
+## Skills
+
+- **agent-builder**: create, configure and test agents (prompt, skills, knowledge bases, voice, chat).
+- **evaluations**: rubrics, test sets, runs, CI gates, reports.
+`;
+/** Set up Claude Code in `cwd`. Existing files are merged, never overwritten, unless force is set for skills and rules. */
+export function initProject(cwd, opts = {}) {
+    const packageRoot = opts.packageRoot ?? resolve(dirname(fileURLToPath(import.meta.url)), '..', '..');
+    // Claude Code finds project skills at .claude/skills/<name>/SKILL.md, one folder per skill.
+    const skillsTarget = join(cwd, '.claude', 'skills');
+    for (const skill of readdirSync(join(packageRoot, 'skills'), { withFileTypes: true }).filter((d) => d.isDirectory())) {
+        const target = join(skillsTarget, skill.name);
+        if (!existsSync(target) || opts.force) {
+            mkdirSync(target, { recursive: true });
+            cpSync(join(packageRoot, 'skills', skill.name), target, { recursive: true });
+        }
+    }
+    const rulesPath = join(cwd, '.claude', 'rules', 'indemn.md');
+    if (!existsSync(rulesPath) || opts.force) {
+        mkdirSync(dirname(rulesPath), { recursive: true });
+        writeFileSync(rulesPath, RULES);
+    }
+    let mcp = 'skipped';
+    if (opts.mcp !== false) {
+        const path = join(cwd, '.mcp.json');
+        const cfg = readJson(path);
+        cfg.mcpServers = cfg.mcpServers ?? {};
+        if (cfg.mcpServers.indemn) {
+            mcp = 'kept';
+        }
+        else {
+            cfg.mcpServers.indemn = MCP_SERVER_ENTRY;
+            writeFileSync(path, JSON.stringify(cfg, null, 2) + '\n');
+            mcp = 'added';
+        }
+    }
+    let permissions = 'skipped';
+    if (opts.permissions !== false) {
+        const path = join(cwd, '.claude', 'settings.json');
+        const cfg = readJson(path);
+        const had = Boolean(cfg.permissions);
+        cfg.permissions = cfg.permissions ?? {};
+        const block = permissionBlock();
+        const denied = new Set(cfg.permissions.deny ?? []);
+        const askSet = new Set([...(cfg.permissions.ask ?? []), ...block.ask]);
+        // A tool the user already restricted is never loosened.
+        const allowSet = new Set([...(cfg.permissions.allow ?? []), ...block.allow.filter((r) => !askSet.has(r) && !denied.has(r))]);
+        cfg.permissions.allow = [...allowSet].sort();
+        cfg.permissions.ask = [...askSet].filter((r) => !denied.has(r)).sort();
+        mkdirSync(dirname(path), { recursive: true });
+        writeFileSync(path, JSON.stringify(cfg, null, 2) + '\n');
+        permissions = had ? 'merged' : 'added';
+    }
+    return { skills: skillsTarget, rules: rulesPath, mcp, permissions };
+}
+/** What is set up in `cwd`, for `indemn init --status`. */
+export function initStatus(cwd) {
+    const mcp = readJson(join(cwd, '.mcp.json'));
+    const settings = readJson(join(cwd, '.claude', 'settings.json'));
+    const login = IndemnClient.loadConfig();
+    let link = null;
+    try {
+        link = findLinkFile(cwd)?.path ?? null;
+    }
+    catch {
+        link = null;
+    }
+    return [
+        ['Skills', existsSync(join(cwd, '.claude', 'skills', 'agent-builder', 'SKILL.md')), '.claude/skills/agent-builder, evaluations'],
+        ['Rules', existsSync(join(cwd, '.claude', 'rules', 'indemn.md')), '.claude/rules/indemn.md'],
+        ['MCP server', Boolean(mcp.mcpServers?.indemn), '.mcp.json'],
+        ['Permissions', (settings.permissions?.ask ?? []).some((r) => r.startsWith('mcp__indemn__')), '.claude/settings.json'],
+        ['Logged in', Boolean(login), login ? `${login.email ?? login.user_id} on ${login.environment}` : 'run `indemn login`'],
+        ['Folder linked', Boolean(link), link ?? 'optional: `indemn link --org <id>`'],
+    ];
+}
+export function registerInitCommand(program) {
+    program
+        .command('init')
+        .description('Set up Claude Code here: skills, rules, the MCP server in .mcp.json, and permissions (reads allowed, changes ask)')
+        .option('--force', 'Overwrite the installed skills and rules')
+        .option('--no-mcp', 'Do not add the MCP server to .mcp.json')
+        .option('--no-permissions', 'Do not add permission rules to .claude/settings.json')
+        .option('--status', 'Show what is set up and stop')
+        .action((options) => {
+        try {
+            const cwd = process.cwd();
+            if (options.status) {
+                for (const [what, ok, detail] of initStatus(cwd))
+                    console.log(`${ok ? chalk.green('✓') : chalk.yellow('·')} ${what.padEnd(14)} ${chalk.dim(detail)}`);
+                return;
+            }
+            const r = initProject(cwd, { force: options.force, mcp: options.mcp, permissions: options.permissions });
+            printSuccess('Indemn CLI set up for Claude Code:');
+            console.log(`  Skills:      ${r.skills}`);
+            console.log(`  Rules:       ${r.rules}`);
+            console.log(`  MCP server:  ${r.mcp === 'added' ? 'added to .mcp.json' : r.mcp === 'kept' ? 'already in .mcp.json (kept)' : 'skipped'}`);
+            console.log(`  Permissions: ${r.permissions === 'skipped' ? 'skipped' : `${r.permissions} in .claude/settings.json (reads allowed, changes ask)`}`);
+            const login = IndemnClient.loadConfig();
+            if (!login)
+                console.log(chalk.yellow('Next: run `indemn login --env dev` (or production).'));
+            else if ((login.orgs?.length ?? 0) > 1 && !findLinkFile(cwd))
+                console.log(chalk.dim('Tip: pin this folder to one org with `indemn link --org <id>`.'));
+        }
+        catch (err) {
+            printError(err);
+            process.exit(1);
+        }
+    });
+}
+//# sourceMappingURL=init.js.map

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package/dist/cli/kb.d.ts.map

@@ -1 +1 @@
-{"version":3,"file":"kb.d.ts","sourceRoot":"","sources":["../../src/cli/kb.ts"],"names":[],"mappings":"AAAA,OAAO,EAAE,OAAO,EAAE,MAAM,WAAW,CAAC;AAMpC,wBAAgB,kBAAkB,CAAC,OAAO,EAAE,OAAO,GAAG,IAAI,CA0azD"}
+{"version":3,"file":"kb.d.ts","sourceRoot":"","sources":["../../src/cli/kb.ts"],"names":[],"mappings":"AAAA,OAAO,EAAE,OAAO,EAAE,MAAM,WAAW,CAAC;AAUpC,wBAAgB,kBAAkB,CAAC,OAAO,EAAE,OAAO,GAAG,IAAI,CA6gBzD"}

package/dist/cli/kb.js

@@ -1,7 +1,11 @@
+import { readFileSync } from 'node:fs';
+import { confirmOrExit } from './link.js';
+import { CliError } from '../core/runtime.js';
+import chalk from 'chalk';
 import ora from 'ora';
 import { IndemnClient } from '../sdk/client.js';
 import { KBSDK } from '../sdk/kb.js';
-import { formatTable, printJson, printError, printSuccess, confirm } from './utils/output.js';
+import { formatTable, printJson, printError, printSuccess } from './utils/output.js';
 export function registerKBCommands(program) {
     const kb = program.command('kb').description('Manage knowledge bases');
     kb.command('list')
@@ -122,16 +126,22 @@ export function registerKBCommands(program) {
     });
     kb.command('delete')
         .argument('<kb-id>', 'Knowledge base ID')
-        .description('Delete a knowledge base')
-        .action(async (kbId) => {
+        .option('--dry-run', 'Show what would be deleted and stop')
+        .option('--yes', 'Do not ask for confirmation')
+        .description('Delete a knowledge base and all its sources (unlink it from agents first)')
+        .action(async (kbId, options) => {
         try {
-            const confirmed = await confirm(`Delete knowledge base ${kbId}? This cannot be undone.`);
-            if (!confirmed) {
-                console.log('Cancelled.');
-                return;
-            }
             const client = new IndemnClient();
             const sdk = new KBSDK(client);
+            const target = await sdk.getKB(kbId);
+            const agents = (target.aiAgents ?? []).map((a) => a.name).filter(Boolean);
+            console.log(`Would delete "${target.name ?? kbId}" with ${target.totalDataSourceCount ?? '?'} source(s).`);
+            if (agents.length) {
+                throw new CliError(`It is linked to ${agents.join(', ')}. Unlink it first: indemn kb unlink <agent-id> ${kbId}`);
+            }
+            if (options.dryRun)
+                return;
+            await confirmOrExit(`Delete knowledge base "${target.name ?? kbId}"? Its vectors are removed too.`, Boolean(options.yes));
             const spinner = ora('Deleting knowledge base...').start();
             await sdk.deleteKB(kbId);
             spinner.stop();
@@ -265,13 +275,10 @@ export function registerKBCommands(program) {
         .argument('<kb-id>', 'Knowledge base ID')
         .argument('<source-id>', 'Data source ID')
         .description('Delete a data source')
-        .action(async (kbId, sourceId) => {
+        .option('--yes', 'Do not ask for confirmation')
+        .action(async (kbId, sourceId, options) => {
         try {
-            const confirmed = await confirm(`Delete data source ${sourceId}? This cannot be undone.`);
-            if (!confirmed) {
-                console.log('Cancelled.');
-                return;
-            }
+            await confirmOrExit(`Delete data source ${sourceId} from knowledge base ${kbId}? Its vectors are removed too.`, Boolean(options.yes));
             const client = new IndemnClient();
             const sdk = new KBSDK(client);
             const spinner = ora('Deleting data source...').start();
@@ -284,6 +291,121 @@ export function registerKBCommands(program) {
             process.exit(1);
         }
     });
+    data.command('chunks')
+        .argument('<kb-id>', 'Knowledge base ID')
+        .argument('<source-id>', 'Data source ID')
+        .option('--json', 'Output as JSON')
+        .description('Show the text chunks the agent actually retrieves from a source')
+        .action(async (kbId, sourceId, options) => {
+        try {
+            const res = await new KBSDK(new IndemnClient()).chunks(kbId, sourceId);
+            if (options.json) {
+                printJson(res);
+                return;
+            }
+            console.log(chalk.bold(`${res.source ?? sourceId}`) + chalk.dim(`  ${res.status ?? ''} · ${res.chunks.length} chunk(s)`));
+            res.chunks.forEach((c, i) => console.log(`${chalk.dim(`#${i + 1}`)} ${c}\n`));
+        }
+        catch (err) {
+            printError(err);
+            process.exit(1);
+        }
+    });
+    data.command('reimport')
+        .argument('<kb-id>', 'Knowledge base ID')
+        .argument('<source-id>', 'URL data source ID')
+        .option('--js-script <file>', 'Script to run on each page before reading it')
+        .option('--yes', 'Do not ask for confirmation')
+        .description('Crawl a URL source again after the website changed (runs in the background; see `kb status`)')
+        .action(async (kbId, sourceId, options) => {
+        try {
+            await confirmOrExit(`Re-crawl source ${sourceId}? Its chunks are replaced when the crawl finishes.`, Boolean(options.yes));
+            const js = options.jsScript ? readFileSync(options.jsScript, 'utf8') : undefined;
+            await new KBSDK(new IndemnClient()).reimport(kbId, sourceId, js);
+            printSuccess(`Re-import started. Follow it with: indemn kb status ${kbId}`);
+        }
+        catch (err) {
+            printError(err);
+            process.exit(1);
+        }
+    });
+    kb.command('status')
+        .argument('<kb-id>', 'Knowledge base ID')
+        .option('--json', 'Output as JSON')
+        .description('Progress of website crawls and file imports')
+        .action(async (kbId, options) => {
+        try {
+            const rows = await new KBSDK(new IndemnClient()).scrapeStatus(kbId);
+            if (options.json) {
+                printJson(rows);
+                return;
+            }
+            if (!rows.length) {
+                console.log('No website or file sources yet.');
+                return;
+            }
+            console.log(formatTable(['Source', 'Status', 'Job', 'Error'], rows.map((r) => [r.source ?? '', r.status ?? '', r.job_status ?? '', r.error ?? ''])));
+        }
+        catch (err) {
+            printError(err);
+            process.exit(1);
+        }
+    });
+    kb.command('gaps')
+        .option('--agent <id>', 'Only questions asked to this agent')
+        .option('--kb <id>', 'Only questions for this knowledge base')
+        .option('--themes', 'Group into themes instead of listing questions')
+        .option('--days <n>', 'With --themes: look back this many days')
+        .option('--include-test', 'Include questions from test conversations')
+        .option('--page <n>', 'Page, starting at 0', '0')
+        .option('--limit <n>', 'Rows per page (at most 100)', '20')
+        .option('--json', 'Output as JSON')
+        .description('Questions the agents could not answer: what to add to the knowledge base next')
+        .action(async (options) => {
+        try {
+            const sdk = new KBSDK(new IndemnClient());
+            if (options.themes) {
+                printJson(await sdk.gapClusters({ days: options.days ? Number(options.days) : undefined, page: Number(options.page), limit: Number(options.limit) }));
+                return;
+            }
+            const res = await sdk.gaps({ agentId: options.agent, kbId: options.kb, includeTest: options.includeTest, page: Number(options.page), limit: Number(options.limit) });
+            if (options.json) {
+                printJson(res);
+                return;
+            }
+            const rows = res.responses ?? [];
+            if (!rows.length) {
+                console.log('No unanswered questions.');
+                return;
+            }
+            console.log(formatTable(['Question', 'Status', 'Channel'], rows.map((r) => [String(r.user_query ?? '').slice(0, 80), String(r.status ?? ''), String(r.channel ?? '')])));
+            console.log(chalk.dim(`${res.total ?? rows.length} in total.`));
+        }
+        catch (err) {
+            printError(err);
+            process.exit(1);
+        }
+    });
+    kb.command('check')
+        .argument('<question>', 'A question a customer might ask')
+        .option('--json', 'Output as JSON')
+        .description('Could the org\'s knowledge answer this? Shows the best matching chunks')
+        .action(async (question, options) => {
+        try {
+            const res = await new KBSDK(new IndemnClient()).check(question);
+            if (options.json) {
+                printJson(res);
+                return;
+            }
+            console.log(res.answerable ? chalk.green(`Answerable (score ${res.top_score})`) : chalk.yellow(`Not answerable (best score ${res.top_score ?? 0})`));
+            for (const src of (res.sources ?? []).slice(0, 3))
+                console.log(chalk.dim(`- (${src.score}) ${String(src.text ?? '').slice(0, 200)}`));
+        }
+        catch (err) {
+            printError(err);
+            process.exit(1);
+        }
+    });
     // Link/unlink commands
     kb.command('link')
         .argument('<agent-id>', 'Agent ID')
@@ -307,8 +429,10 @@ export function registerKBCommands(program) {
         .argument('<agent-id>', 'Agent ID')
         .argument('<kb-id>', 'Knowledge base ID')
         .description('Unlink a knowledge base from an agent')
-        .action(async (agentId, kbId) => {
+        .option('--yes', 'Do not ask for confirmation')
+        .action(async (agentId, kbId, options) => {
         try {
+            await confirmOrExit(`Unlink knowledge base ${kbId} from agent ${agentId}? The agent stops using it immediately.`, Boolean(options.yes));
             const client = new IndemnClient();
             const sdk = new KBSDK(client);
             const spinner = ora('Unlinking knowledge base...').start();
@@ -343,8 +467,10 @@ export function registerKBCommands(program) {
         .argument('<kb-id>', 'Knowledge base ID')
         .description('Import QNA pairs from a JSON file into a knowledge base')
         .requiredOption('--file <path>', 'Path to JSON file with array of {question, answer} pairs')
+        .option('--yes', 'Do not ask for confirmation')
         .action(async (kbId, options) => {
         try {
+            await confirmOrExit(`Import into knowledge base ${kbId}? The agent starts answering from the new content once processed.`, Boolean(options.yes));
             const fs = await import('fs');
             const filePath = options.file;
             if (!fs.existsSync(filePath)) {