@imranq2/fhirpatientsummary 1.0.14 → 1.0.15

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Files changed (4) hide show
  1. package/README.md +2 -0
  2. package/dist/index.cjs +7 -9
  3. package/dist/index.js +7 -9
  4. package/package.json +1 -1
package/README.md CHANGED
@@ -2,6 +2,8 @@
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  This project provides utilities to generate patient summaries from FHIR Bundles, including narrative generation and section extraction, following the International Patient Summary (IPS) specification.
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+ Detailed explanation of content of each section of IPS is [here](./sections.md)
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+
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  ## Installation
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  Clone the repository and install dependencies:
package/dist/index.cjs CHANGED
@@ -126,9 +126,7 @@ var IPSSectionResourceMap = {
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  ["AdvanceDirectivesSection" /* ADVANCE_DIRECTIVES */]: ["Consent"]
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  };
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  var IPSSectionResourceFilters = {
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- // Only include active allergies
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- ["AllergyIntoleranceSection" /* ALLERGIES */]: (resource) => resource.resourceType === "AllergyIntolerance" && resource.clinicalStatus?.coding?.some((c) => typeof c.code === "string"),
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- // Only include active problems/conditions
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+ // Only include active conditions
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  ["ProblemSection" /* PROBLEMS */]: (resource) => resource.resourceType === "Condition" && resource.clinicalStatus?.coding?.some((c) => !["inactive", "resolved"].includes(c.code)),
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  // Only include completed immunizations
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  ["ImmunizationSection" /* IMMUNIZATIONS */]: (resource) => resource.resourceType === "Immunization" && resource.status === "completed" || resource.resourceType === "Organization",
@@ -138,12 +136,12 @@ var IPSSectionResourceFilters = {
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  ["ResultsSection" /* DIAGNOSTIC_REPORTS */]: (resource) => ["DiagnosticReport", "Observation"].includes(resource.resourceType) && resource.status === "final",
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  // Only include completed procedures
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  ["HistoryOfProceduresSection" /* PROCEDURES */]: (resource) => resource.resourceType === "Procedure" && resource.status === "completed",
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- // Only include social history Observations (category.coding contains 'social-history')
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+ // Only include social history Observations
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  ["SocialHistorySection" /* SOCIAL_HISTORY */]: (resource) => resource.resourceType === "Observation" && resource.code?.coding?.some((c) => Object.keys(SOCIAL_HISTORY_LOINC_CODES).includes(c.code)),
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- // Only include pregnancy history Observations (category.coding contains 'pregnancy')
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+ // Only include pregnancy history Observations
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  ["HistoryOfPregnancySection" /* PREGNANCY_HISTORY */]: (resource) => resource.resourceType === "Observation" && (resource.code?.coding?.some((c) => Object.keys(PREGNANCY_LOINC_CODES.PREGNANCY_STATUS).includes(c.code)) || resource.valueCodeableConcept?.coding?.some((c) => Object.keys(PREGNANCY_LOINC_CODES.PREGNANCY_OUTCOME).includes(c.code))),
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- // Only include active functional status Conditions or ClinicalImpressions
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- ["FunctionalStatusSection" /* FUNCTIONAL_STATUS */]: (resource) => resource.resourceType === "Condition" && resource.clinicalStatus?.coding?.some((c) => typeof c.code === "string") || resource.resourceType === "ClinicalImpression" && resource.status === "completed",
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+ // Only include Conditions or completed ClinicalImpressions
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+ ["FunctionalStatusSection" /* FUNCTIONAL_STATUS */]: (resource) => resource.resourceType === "Condition" || resource.resourceType === "ClinicalImpression" && resource.status === "completed",
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  // Only include resolved medical history Conditions
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  ["HistoryOfPastIllnessSection" /* MEDICAL_HISTORY */]: (resource) => resource.resourceType === "Condition" && resource.clinicalStatus?.coding?.some((c) => ["inactive", "resolved"].includes(c.code)),
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  // Only include active care plans
@@ -993,8 +991,8 @@ var AllergyIntoleranceTemplate = class _AllergyIntoleranceTemplate {
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  if (resource.entry && Array.isArray(resource.entry)) {
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  for (const entry of resource.entry) {
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  const allergy = entry.resource;
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- const status = allergy.clinicalStatus?.coding?.[0]?.code || "";
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- if (status === "inactive" || status === "resolved") {
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+ const isResolved = allergy.clinicalStatus?.coding?.some((c) => ["inactive", "resolved"].includes(c.code));
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+ if (isResolved) {
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  resolvedAllergies.push(allergy);
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  } else {
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  activeAllergies.push(allergy);
package/dist/index.js CHANGED
@@ -98,9 +98,7 @@ var IPSSectionResourceMap = {
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  ["AdvanceDirectivesSection" /* ADVANCE_DIRECTIVES */]: ["Consent"]
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  };
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  var IPSSectionResourceFilters = {
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- // Only include active allergies
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- ["AllergyIntoleranceSection" /* ALLERGIES */]: (resource) => resource.resourceType === "AllergyIntolerance" && resource.clinicalStatus?.coding?.some((c) => typeof c.code === "string"),
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- // Only include active problems/conditions
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+ // Only include active conditions
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  ["ProblemSection" /* PROBLEMS */]: (resource) => resource.resourceType === "Condition" && resource.clinicalStatus?.coding?.some((c) => !["inactive", "resolved"].includes(c.code)),
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  // Only include completed immunizations
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  ["ImmunizationSection" /* IMMUNIZATIONS */]: (resource) => resource.resourceType === "Immunization" && resource.status === "completed" || resource.resourceType === "Organization",
@@ -110,12 +108,12 @@ var IPSSectionResourceFilters = {
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  ["ResultsSection" /* DIAGNOSTIC_REPORTS */]: (resource) => ["DiagnosticReport", "Observation"].includes(resource.resourceType) && resource.status === "final",
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  // Only include completed procedures
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  ["HistoryOfProceduresSection" /* PROCEDURES */]: (resource) => resource.resourceType === "Procedure" && resource.status === "completed",
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- // Only include social history Observations (category.coding contains 'social-history')
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+ // Only include social history Observations
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  ["SocialHistorySection" /* SOCIAL_HISTORY */]: (resource) => resource.resourceType === "Observation" && resource.code?.coding?.some((c) => Object.keys(SOCIAL_HISTORY_LOINC_CODES).includes(c.code)),
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- // Only include pregnancy history Observations (category.coding contains 'pregnancy')
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+ // Only include pregnancy history Observations
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  ["HistoryOfPregnancySection" /* PREGNANCY_HISTORY */]: (resource) => resource.resourceType === "Observation" && (resource.code?.coding?.some((c) => Object.keys(PREGNANCY_LOINC_CODES.PREGNANCY_STATUS).includes(c.code)) || resource.valueCodeableConcept?.coding?.some((c) => Object.keys(PREGNANCY_LOINC_CODES.PREGNANCY_OUTCOME).includes(c.code))),
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- // Only include active functional status Conditions or ClinicalImpressions
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- ["FunctionalStatusSection" /* FUNCTIONAL_STATUS */]: (resource) => resource.resourceType === "Condition" && resource.clinicalStatus?.coding?.some((c) => typeof c.code === "string") || resource.resourceType === "ClinicalImpression" && resource.status === "completed",
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+ // Only include Conditions or completed ClinicalImpressions
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+ ["FunctionalStatusSection" /* FUNCTIONAL_STATUS */]: (resource) => resource.resourceType === "Condition" || resource.resourceType === "ClinicalImpression" && resource.status === "completed",
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  // Only include resolved medical history Conditions
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  ["HistoryOfPastIllnessSection" /* MEDICAL_HISTORY */]: (resource) => resource.resourceType === "Condition" && resource.clinicalStatus?.coding?.some((c) => ["inactive", "resolved"].includes(c.code)),
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  // Only include active care plans
@@ -965,8 +963,8 @@ var AllergyIntoleranceTemplate = class _AllergyIntoleranceTemplate {
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  if (resource.entry && Array.isArray(resource.entry)) {
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  for (const entry of resource.entry) {
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  const allergy = entry.resource;
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- const status = allergy.clinicalStatus?.coding?.[0]?.code || "";
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- if (status === "inactive" || status === "resolved") {
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+ const isResolved = allergy.clinicalStatus?.coding?.some((c) => ["inactive", "resolved"].includes(c.code));
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+ if (isResolved) {
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  resolvedAllergies.push(allergy);
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  } else {
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  activeAllergies.push(allergy);
package/package.json CHANGED
@@ -1,6 +1,6 @@
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  {
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  "name": "@imranq2/fhirpatientsummary",
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- "version": "1.0.14",
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+ "version": "1.0.15",
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  "description": "A template for creating npm packages using TypeScript and VSCode",
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  "main": "./dist/index.js",
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  "module": "./dist/index.mjs",