@imix-js/taproot 0.3.0 → 0.4.0

package/dist/adapters/index.d.ts

@@ -5,7 +5,7 @@
  * skills/ directory and produces agent-specific wrapper files. Adapters
  * are derived — regenerating them is always safe and idempotent.
  */
-export type AgentName = 'claude' | 'cursor' | 'copilot' | 'windsurf' | 'gemini' | 'generic';
+export type AgentName = 'claude' | 'cursor' | 'copilot' | 'windsurf' | 'gemini' | 'generic' | 'aider';
 export declare const ALL_AGENTS: AgentName[];
 export type AgentTier = 1 | 2 | 3;
 export declare const AGENT_TIERS: Record<AgentName, AgentTier>;
@@ -16,6 +16,16 @@ export interface AdapterResult {
         path: string;
         status: 'created' | 'updated' | 'exists';
     }>;
+    error?: string;
 }
 export declare function generateAdapters(agents: AgentName | AgentName[] | 'all', projectRoot: string): AdapterResult[];
+interface SkillDef {
+    filename: string;
+    name: string;
+    content: string;
+    description: string;
+    invocation: string;
+}
+export declare function generateAiderAdapter(skills: SkillDef[], projectRoot: string): AdapterResult;
 export declare function buildInvocationBlock(cli?: string): string;
+export {};

package/dist/adapters/index.js

@@ -8,6 +8,7 @@
 import { existsSync, mkdirSync, readFileSync, writeFileSync } from 'fs';
 import { join, resolve, dirname } from 'path';
 import { fileURLToPath } from 'url';
+import yaml from 'js-yaml';
 import { SKILL_FILES } from '../commands/init.js';
 import { loadConfig } from '../core/config.js';
 import { loadLanguagePack, substituteTokens, applyVocabulary, getStructuralKeys } from '../core/language.js';
@@ -16,10 +17,11 @@ const BUNDLED_SKILLS_DIR = resolve(__dirname, '..', '..', 'skills');
 // Markers for idempotent section injection into existing files
 const TAPROOT_START = '<!-- TAPROOT:START -->';
 const TAPROOT_END = '<!-- TAPROOT:END -->';
-export const ALL_AGENTS = ['claude', 'cursor', 'copilot', 'windsurf', 'gemini', 'generic'];
+export const ALL_AGENTS = ['claude', 'cursor', 'copilot', 'windsurf', 'gemini', 'generic', 'aider'];
 export const AGENT_TIERS = {
     claude: 1,
     gemini: 2,
+    aider: 2,
     cursor: 3,
     copilot: 3,
     windsurf: 3,
@@ -51,6 +53,7 @@ function generateAdapter(agent, projectRoot) {
         case 'windsurf': return generateWindsurfAdapter(skills, projectRoot, cli);
         case 'gemini': return generateGeminiAdapter(skills, projectRoot, cli);
         case 'generic': return generateGenericAdapter(skills, projectRoot, cli);
+        case 'aider': return generateAiderAdapter(skills, projectRoot);
     }
 }
 function loadSkills(pack, vocab) {
@@ -426,6 +429,115 @@ ${skillSections}
 ${TAPROOT_END}
 `;
 }
+// ─── Aider adapter ────────────────────────────────────────────────────────────
+// .aider.conf.yml — Aider config with read: entries for skill context
+// CONVENTIONS.md — taproot workflow instructions for Aider sessions
+// Taproot read paths injected into .aider.conf.yml
+function aiderReadPaths(skills) {
+    return [
+        ...skills.map(s => `.taproot/skills/${s.filename}`),
+        'CONVENTIONS.md',
+    ];
+}
+export function generateAiderAdapter(skills, projectRoot) {
+    const files = [];
+    // Handle .aider.conf.yml
+    const confPath = join(projectRoot, '.aider.conf.yml');
+    const confExisted = existsSync(confPath);
+    const readPaths = aiderReadPaths(skills);
+    if (confExisted) {
+        const raw = readFileSync(confPath, 'utf-8');
+        let parsed;
+        try {
+            parsed = yaml.load(raw) ?? {};
+        }
+        catch {
+            // Return error — do not modify file
+            return {
+                agent: 'aider',
+                files: [{ path: confPath, status: 'exists' }],
+                error: `Cannot merge — \`.aider.conf.yml\` is not valid YAML. Fix the file and re-run \`taproot init --agent aider\`.`,
+            };
+        }
+        // Merge read: entries
+        const existing = Array.isArray(parsed['read']) ? parsed['read'] : [];
+        const merged = [...existing];
+        for (const p of readPaths) {
+            if (!merged.includes(p))
+                merged.push(p);
+        }
+        parsed['read'] = merged;
+        writeFileSync(confPath, yaml.dump(parsed), 'utf-8');
+        files.push({ path: confPath, status: 'updated' });
+    }
+    else {
+        writeFileSync(confPath, buildAiderConfYml(readPaths), 'utf-8');
+        files.push({ path: confPath, status: 'created' });
+    }
+    // Write CONVENTIONS.md
+    const conventionsPath = join(projectRoot, 'CONVENTIONS.md');
+    const conventionsExisted = existsSync(conventionsPath);
+    writeFileSync(conventionsPath, buildAiderConventionsMd(skills), 'utf-8');
+    files.push({ path: conventionsPath, status: conventionsExisted ? 'updated' : 'created' });
+    return { agent: 'aider', files };
+}
+function buildAiderConfYml(readPaths) {
+    const readList = readPaths.map(p => `  - ${p}`).join('\n');
+    return `# Taproot agent adapter — generated by taproot init --agent aider
+# Re-run taproot update to refresh. Do not remove read: entries added below.
+read:
+${readList}
+`;
+}
+function buildAiderConventionsMd(skills) {
+    const skillList = skills.map(s => `- **${s.name}** — ${s.description}. Full definition: \`.taproot/skills/${s.filename}\``).join('\n');
+    return `# Taproot Conventions for Aider
+
+<!-- Auto-generated by taproot init --agent aider. Re-run taproot update to refresh. -->
+
+This project uses **Taproot** to maintain a living requirement hierarchy alongside the code. Before making changes, check whether the relevant behaviour spec exists in \`taproot/\`.
+
+## Hierarchy
+
+\`\`\`
+taproot/
+├── <intent-slug>/          # business goal (intent.md)
+│   └── <behaviour-slug>/   # system behaviour (usecase.md)
+│       └── <impl-slug>/    # implementation record (impl.md)
+\`\`\`
+
+- **Intent** (\`intent.md\`): stakeholders, goal, success criteria, constraints
+- **Behaviour** (\`usecase.md\`): actor, preconditions, main flow, postconditions, acceptance criteria
+- **Implementation** (\`impl.md\`): source files, commits, tests — traceability bridge
+
+## Workflows
+
+Invoke these by natural language in your Aider session (e.g. "implement the behaviour at taproot/my-intent/my-behaviour/"):
+
+${skillList}
+
+## Commit Convention
+
+When implementing a behaviour, commit with:
+\`\`\`
+taproot(<intent>/<behaviour>/<impl>): <what this commit does>
+\`\`\`
+
+## CLI Commands
+
+\`\`\`bash
+taproot validate-structure   # check folder hierarchy rules
+taproot validate-format      # check document schemas
+taproot coverage             # completeness tree
+taproot check-orphans        # find broken references
+taproot sync-check           # detect stale specs
+\`\`\`
+
+## Pre-commit Hook
+
+The pre-commit hook enforces DoD/DoR gates and spec quality on every commit. If it rejects a commit, the error message includes a correction hint — fix the issue and re-commit.
+`;
+}
 // ─── CLI Invocation Block ─────────────────────────────────────────────────────
 const DEFAULT_CLI_PREFIX = 'npx @imix-js/taproot';
 const CLI_INVOCATION_MARKER_PREFIX = '<!-- taproot:cli-invocation:';

package/dist/adapters/index.js.map

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package/dist/commands/dod.d.ts

@@ -6,6 +6,7 @@ export declare function runDod(options: {
     implPath?: string;
     dryRun?: boolean;
     cwd?: string;
+    rerunTests?: boolean;
 }): Promise<DodReport>;
 /** Advance parent usecase.md state from 'specified' → 'implemented' when impl is marked complete. */
 export declare function cascadeUsecaseState(absImplPath: string): string | null;

package/dist/commands/dod.js

@@ -10,8 +10,15 @@ export function registerDod(program) {
         .option('--cwd <dir>', 'Working directory for running shell commands')
         .option('--resolve <condition>', 'Record agent resolution for a named condition (repeatable)', (v, a) => [...a, v], [])
         .option('--note <note>', 'Resolution note (used with --resolve, repeatable)', (v, a) => [...a, v], [])
+        .option('--rerun-tests', 'Ignore cached test result and re-execute testsCommand')
         .action(async (implPath, options) => {
         const cwd = options.cwd ? resolve(options.cwd) : process.cwd();
+        // --rerun-tests requires impl-path
+        if (options.rerunTests && !implPath) {
+            process.stderr.write('Error: --rerun-tests requires an impl-path argument\n');
+            process.exitCode = 1;
+            return;
+        }
         // --resolve mode: write one or more resolutions to impl.md
         if (options.resolve && options.resolve.length > 0) {
             if (!implPath) {
@@ -19,6 +26,17 @@ export function registerDod(program) {
                 process.exitCode = 1;
                 return;
             }
+            // Reject --resolve "tests-passing" when testsCommand is configured
+            const { config } = loadConfig(cwd);
+            if (config.testsCommand) {
+                const testsPassingAttempt = options.resolve.find(r => r === 'tests-passing');
+                if (testsPassingAttempt) {
+                    process.stderr.write('Error: tests-passing cannot be resolved by assertion when testsCommand is configured. ' +
+                        `Run taproot dod ${implPath} to execute tests and record evidence.\n`);
+                    process.exitCode = 1;
+                    return;
+                }
+            }
             const notes = options.note ?? [];
             for (let i = 0; i < options.resolve.length; i++) {
                 const condition = options.resolve[i];
@@ -28,7 +46,7 @@ export function registerDod(program) {
             }
             return;
         }
-        const report = await runDod({ implPath, dryRun: options.dryRun ?? false, cwd });
+        const report = await runDod({ implPath, dryRun: options.dryRun ?? false, cwd, rerunTests: options.rerunTests });
         if (!report.configured) {
             process.stdout.write('No Definition of Done configured — skipping checks.\n');
             if (implPath && !options.dryRun) {
@@ -65,7 +83,11 @@ export function registerDod(program) {
 export async function runDod(options) {
     const cwd = options.cwd ?? process.cwd();
     const { config } = loadConfig(cwd);
-    const report = runDodChecks(config.definitionOfDone, cwd, { implPath: options.implPath });
+    const report = await runDodChecks(config.definitionOfDone, cwd, {
+        implPath: options.implPath,
+        config,
+        rerunTests: options.rerunTests,
+    });
     if (options.implPath && !options.dryRun && report.allPassed) {
         const absPath = resolve(cwd, options.implPath);
         markImplComplete(absPath);

package/dist/commands/dod.js.map

@@ -1 +1 @@
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package/dist/commands/init.js

@@ -117,6 +117,7 @@ export function registerInit(program) {
                 copilot: 'GitHub Copilot',
                 windsurf: 'Windsurf',
                 gemini: 'Gemini CLI',
+                aider: 'Aider',
                 generic: 'Generic (any AI agent)',
             };
             const selected = await checkbox({
@@ -218,7 +219,8 @@ export function runInit(options) {
         const hookPath = join(hookDir, 'pre-commit');
         if (existsSync(join(cwd, '.git')) && !existsSync(hookPath)) {
             mkdirSync(hookDir, { recursive: true });
-            writeFileSync(hookPath, '#!/bin/sh\ntaproot commithook\n', { mode: 0o755 });
+            const pkgVersion = JSON.parse(readFileSync(resolve(__dirname, '..', '..', 'package.json'), 'utf-8')).version;
+            writeFileSync(hookPath, `#!/bin/sh\nnpx @imix-js/taproot@${pkgVersion} commithook\n`, { mode: 0o755 });
             messages.push('created  .git/hooks/pre-commit');
         }
     }
@@ -229,6 +231,10 @@ export function runInit(options) {
     if (options.agent) {
         const results = generateAdapters(options.agent, cwd);
         for (const result of results) {
+            if (result.error) {
+                messages.push(`error    ${result.error}`);
+                continue;
+            }
             for (const file of result.files) {
                 const rel = file.path.replace(cwd + '/', '').replace(cwd + '\\', '');
                 const verb = file.status === 'created' ? 'created' : file.status === 'updated' ? 'updated' : 'exists ';

package/dist/commands/init.js.map

@@ -1 +1 @@
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package/dist/commands/update.js

@@ -1,5 +1,7 @@
 import { existsSync, rmSync, readdirSync, readFileSync, writeFileSync, unlinkSync, mkdirSync, renameSync } from 'fs';
 import { join, dirname, relative, resolve } from 'path';
+import { fileURLToPath } from 'url';
+const __dirname = dirname(fileURLToPath(import.meta.url));
 import { buildConfigurationMd } from '../core/configuration.js';
 import { generateAdapters } from '../adapters/index.js';
 import { installSkills, installDocs, SKILL_FILES } from './init.js';
@@ -14,6 +16,10 @@ const STALE_PATHS = [
     // tr- files that lived in skills/ before moving to commands/
     // resolved dynamically for globbing — see removeStale()
 ];
+function hookScript() {
+    const pkg = JSON.parse(readFileSync(resolve(__dirname, '..', '..', 'package.json'), 'utf-8'));
+    return `#!/bin/sh\nnpx @imix-js/taproot@${pkg.version} commithook\n`;
+}
 function detectInstalledAgents(cwd) {
     const installed = [];
     // claude: tr-*.md files in .claude/commands/ (current), .claude/skills/ (old), or taproot/ subdir (oldest)
@@ -44,6 +50,13 @@ function detectInstalledAgents(cwd) {
     if (existsSync(agentsPath) && readFileSync(agentsPath, 'utf-8').includes(TAPROOT_START)) {
         installed.push('generic');
     }
+    // aider: .aider.conf.yml with taproot read: entries, or CONVENTIONS.md with taproot header
+    const aiderConfPath = join(cwd, '.aider.conf.yml');
+    const conventionsPath = join(cwd, 'CONVENTIONS.md');
+    if ((existsSync(aiderConfPath) && readFileSync(aiderConfPath, 'utf-8').includes('.taproot/skills/')) ||
+        (existsSync(conventionsPath) && readFileSync(conventionsPath, 'utf-8').includes('taproot init --agent aider'))) {
+        installed.push('aider');
+    }
     return installed;
 }
 function removeStale(cwd) {
@@ -82,13 +95,13 @@ function removeStale(cwd) {
         rmSync(brainsDir, { recursive: true, force: true });
         messages.push(`removed  taproot/_brainstorms/`);
     }
-    // Migrate old pre-commit hook content to taproot commithook
+    // Migrate old pre-commit hook content to versioned npx hook
     const hookPath = join(cwd, '.git', 'hooks', 'pre-commit');
     if (existsSync(hookPath)) {
         const hookContent = readFileSync(hookPath, 'utf-8');
-        if (hookContent.includes('validate-structure') || hookContent.includes('validate-format')) {
-            writeFileSync(hookPath, '#!/bin/sh\ntaproot commithook\n', { mode: 0o755 });
-            messages.push(`migrated .git/hooks/pre-commit → taproot commithook`);
+        if (hookContent.includes('validate-structure') || hookContent.includes('validate-format') || hookContent.includes('taproot commithook') || hookContent.includes('@imix-js/taproot')) {
+            writeFileSync(hookPath, hookScript(), { mode: 0o755 });
+            messages.push(`migrated .git/hooks/pre-commit → versioned npx hook`);
         }
     }
     return messages;
@@ -233,6 +246,10 @@ export async function runUpdate(options) {
     for (const agent of agents) {
         const results = generateAdapters(agent, cwd);
         for (const result of results) {
+            if (result.error) {
+                messages.push(`error    ${result.error}`);
+                continue;
+            }
             for (const file of result.files) {
                 const rel = file.path.replace(cwd + '/', '').replace(cwd + '\\', '');
                 const verb = file.status === 'created' ? 'created' : file.status === 'updated' ? 'updated' : 'exists  ';
@@ -282,7 +299,7 @@ export async function runUpdate(options) {
         const hookPath = join(hookDir, 'pre-commit');
         if (existsSync(join(cwd, '.git')) && !existsSync(hookPath)) {
             mkdirSync(hookDir, { recursive: true });
-            writeFileSync(hookPath, '#!/bin/sh\ntaproot commithook\n', { mode: 0o755 });
+            writeFileSync(hookPath, hookScript(), { mode: 0o755 });
             messages.push(`created  .git/hooks/pre-commit`);
         }
         else if (existsSync(hookPath)) {

package/dist/commands/update.js.map

@@ -1 +1 @@
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package/dist/core/configuration.js

@@ -89,6 +89,31 @@ definitionOfReady:
 
 ---
 
+## autonomous
+
+Enable autonomous mode — agent proceeds through skill steps without mid-flow confirmation prompts.
+
+\`\`\`yaml
+autonomous: true
+\`\`\`
+
+**Activation:** Any of three mechanisms activates autonomous mode:
+1. \`autonomous: true\` in \`.taproot/settings.yaml\` (all sessions in this repo)
+2. \`TAPROOT_AUTONOMOUS=1\` environment variable (per-invocation)
+3. \`--autonomous\` flag on a skill invocation (per-skill)
+
+**What changes in autonomous mode:**
+- Plan approval in \`/tr-implement\` is skipped — the agent proceeds directly to writing code after forming the plan internally
+- Staging confirmation in \`/tr-commit\` is skipped when nothing is staged yet
+- DoD conditions are self-evaluated: resolvable conditions are recorded directly; unresolvable \`check:\` questions are marked \`<!-- autonomous: pending-review -->\` in \`impl.md\`
+- Test failures and hook rejections are recorded in \`impl.md\` (impl marked \`needs-rework\`) and the agent stops without committing
+
+**Default:** \`false\` (interactive mode — confirmation prompts shown as normal)
+
+**Requires \`taproot update\`:** no — read at skill runtime.
+
+---
+
 ## cli
 
 CLI invocation prefix. Controls which command agents use when executing taproot CLI steps (e.g. in skill files that reference \`taproot dod\`, \`taproot link-commits\`, etc.).

package/dist/core/configuration.js.map

@@ -1 +1 @@
-{"version":3,"file":"configuration.js","sourceRoot":"","sources":["../../src/core/configuration.ts"],"names":[],"mappings":"AAAA;;;;;GAKG;AAEH,OAAO,EAAE,kBAAkB,EAAE,MAAM,eAAe,CAAC;AAEnD,MAAM,UAAU,oBAAoB;IAClC,MAAM,KAAK,GAAG,kBAAkB,EAAE,CAAC,IAAI,CAAC,IAAI,CAAC,CAAC;IAE9C,OAAO;;;;;;;;;;;;;;;;;wBAiBe,KAAK;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;CAqG5B,CAAC;AACF,CAAC"}
+{"version":3,"file":"configuration.js","sourceRoot":"","sources":["../../src/core/configuration.ts"],"names":[],"mappings":"AAAA;;;;;GAKG;AAEH,OAAO,EAAE,kBAAkB,EAAE,MAAM,eAAe,CAAC;AAEnD,MAAM,UAAU,oBAAoB;IAClC,MAAM,KAAK,GAAG,kBAAkB,EAAE,CAAC,IAAI,CAAC,IAAI,CAAC,CAAC;IAE9C,OAAO;;;;;;;;;;;;;;;;;wBAiBe,KAAK;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;CA8H5B,CAAC;AACF,CAAC"}

package/dist/core/dod-runner.d.ts

@@ -1,4 +1,4 @@
-import type { DodConditionEntry } from '../validators/types.js';
+import type { DodConditionEntry, TaprootConfig } from '../validators/types.js';
 export interface DodResult {
     name: string;
     passed: boolean;
@@ -17,4 +17,6 @@ export interface DodReport {
 export declare function readResolutions(implPath: string, cwd: string): Set<string>;
 export declare function runDodChecks(conditions: DodConditionEntry[] | undefined, cwd: string, options?: {
     implPath?: string;
-}): DodReport;
+    config?: TaprootConfig;
+    rerunTests?: boolean;
+}): Promise<DodReport>;